BLASTX nr result
ID: Cocculus23_contig00006637
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00006637 (720 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006858065.1| hypothetical protein AMTR_s00062p00057610 [A... 285 1e-74 ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop... 283 5e-74 ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chlorop... 276 7e-72 ref|XP_007045631.1| Ribosomal protein L6 family [Theobroma cacao... 273 3e-71 gb|EXB83377.1| 50S ribosomal protein L6 [Morus notabilis] 272 7e-71 ref|XP_002320459.1| ribosomal protein L6 [Populus trichocarpa] g... 271 2e-70 ref|XP_004514093.1| PREDICTED: 50S ribosomal protein L6, chlorop... 270 5e-70 gb|EYU44192.1| hypothetical protein MIMGU_mgv1a013253mg [Mimulus... 267 2e-69 ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop... 267 2e-69 ref|XP_006365808.1| PREDICTED: 50S ribosomal protein L6, chlorop... 266 4e-69 ref|XP_004252860.1| PREDICTED: 50S ribosomal protein L6, chlorop... 266 5e-69 ref|XP_002892273.1| EMB2394 [Arabidopsis lyrata subsp. lyrata] g... 265 1e-68 ref|XP_006418054.1| hypothetical protein EUTSA_v10008693mg [Eutr... 265 2e-68 ref|XP_006304184.1| hypothetical protein CARUB_v10010237mg [Caps... 265 2e-68 ref|NP_172011.1| 50S ribosomal protein L6 [Arabidopsis thaliana]... 265 2e-68 ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop... 265 2e-68 dbj|BAH20405.1| AT1G05190 [Arabidopsis thaliana] 265 2e-68 ref|XP_006447548.1| hypothetical protein CICLE_v10016578mg [Citr... 263 6e-68 ref|XP_007223925.1| hypothetical protein PRUPE_ppa011034mg [Prun... 262 8e-68 gb|AFK43716.1| unknown [Medicago truncatula] 262 1e-67 >ref|XP_006858065.1| hypothetical protein AMTR_s00062p00057610 [Amborella trichopoda] gi|548862168|gb|ERN19532.1| hypothetical protein AMTR_s00062p00057610 [Amborella trichopoda] Length = 225 Score = 285 bits (729), Expect = 1e-74 Identities = 138/162 (85%), Positives = 151/162 (93%) Frame = +1 Query: 1 HPIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMH 180 HPIEVPS+VTI L+GQ+LKVKGPLGELSRTYPREVKV++L+ LKVSKA DTRRANQMH Sbjct: 51 HPIEVPSSVTITLDGQDLKVKGPLGELSRTYPREVKVERLDPTTLKVSKALDTRRANQMH 110 Query: 181 GLFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKV 360 GLFRTLTDNMVVGVSKGFEK+LQLIGVGYRA LE DLVLNLGFSHPVRM IP ++KVKV Sbjct: 111 GLFRTLTDNMVVGVSKGFEKRLQLIGVGYRATLEGNDLVLNLGFSHPVRMPIPKEIKVKV 170 Query: 361 EDNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 EDNTRI VSG+DKCA+GDF+ASIRKWRPPEPYKGKGVKYA+E Sbjct: 171 EDNTRIAVSGFDKCAVGDFSASIRKWRPPEPYKGKGVKYADE 212 >ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis vinifera] gi|297739290|emb|CBI28941.3| unnamed protein product [Vitis vinifera] Length = 226 Score = 283 bits (723), Expect = 5e-74 Identities = 140/161 (86%), Positives = 147/161 (91%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PIEVPSNVTI LEGQ+LKVKGPLGELSRTYPREVKV K ESG L V KA +TRRANQMHG Sbjct: 53 PIEVPSNVTITLEGQDLKVKGPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEK+LQL+GVGYRA +E KDLVLNLGFSHPVRM IP DLKVKVE Sbjct: 113 LFRTLTDNMVVGVSKGFEKRLQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKVKVE 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 DNTRI VSGYDKC IG FAAS+RKWRPPEPYKGKGVKYA+E Sbjct: 173 DNTRIIVSGYDKCNIGQFAASVRKWRPPEPYKGKGVKYADE 213 >ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cucumis sativus] gi|449515641|ref|XP_004164857.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cucumis sativus] Length = 233 Score = 276 bits (705), Expect = 7e-72 Identities = 132/161 (81%), Positives = 150/161 (93%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI+VPS+VTI L+GQ+LKVKGPLGELS YPREVK+++ +SG ++V KA +TRRANQMHG Sbjct: 60 PIQVPSSVTITLQGQDLKVKGPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHG 119 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAM+E KDLVLNLGFSHPVRM IPD +++KVE Sbjct: 120 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVE 179 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDKCAIG FAASIR+WRPPEPYKGKGVKYA+E Sbjct: 180 ENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADE 220 >ref|XP_007045631.1| Ribosomal protein L6 family [Theobroma cacao] gi|508709566|gb|EOY01463.1| Ribosomal protein L6 family [Theobroma cacao] Length = 225 Score = 273 bits (699), Expect = 3e-71 Identities = 133/161 (82%), Positives = 147/161 (91%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI+VPSNVTI LEGQ++KVKGPLGEL+ TYPREVKVD+ E G L+V KA +TRRANQMHG Sbjct: 52 PIQVPSNVTITLEGQDVKVKGPLGELALTYPREVKVDREEPGILRVRKAVETRRANQMHG 111 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEK+LQLIGVGYRAM E KDLVL+LGFSHPVRM IP+ +KVKVE Sbjct: 112 LFRTLTDNMVVGVSKGFEKRLQLIGVGYRAMFEGKDLVLSLGFSHPVRMAIPEGIKVKVE 171 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRI VSGYDK AIG FAAS+RKWRPPEPYKGKGVKYA+E Sbjct: 172 ENTRIVVSGYDKSAIGQFAASVRKWRPPEPYKGKGVKYADE 212 >gb|EXB83377.1| 50S ribosomal protein L6 [Morus notabilis] Length = 225 Score = 272 bits (696), Expect = 7e-71 Identities = 135/160 (84%), Positives = 146/160 (91%) Frame = +1 Query: 7 IEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHGL 186 IEVPSNVTI LEGQ LKVKGPLGELS YPREVKV++ ESG L+V KA +TRRANQMHGL Sbjct: 53 IEVPSNVTITLEGQGLKVKGPLGELSLNYPREVKVEREESGILRVRKAVETRRANQMHGL 112 Query: 187 FRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVED 366 FRTLTDNMVVGVSKGFEK+LQL+GVGYRAMLE KDLVL+LGFSHPVRMTIP+ ++VKVED Sbjct: 113 FRTLTDNMVVGVSKGFEKRLQLVGVGYRAMLEGKDLVLSLGFSHPVRMTIPNGIQVKVED 172 Query: 367 NTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 NTRI VSGYDK IG FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 173 NTRIVVSGYDKSEIGQFAASIRKWRPPEPYKGKGVKYADE 212 >ref|XP_002320459.1| ribosomal protein L6 [Populus trichocarpa] gi|222861232|gb|EEE98774.1| ribosomal protein L6 [Populus trichocarpa] Length = 227 Score = 271 bits (693), Expect = 2e-70 Identities = 130/161 (80%), Positives = 149/161 (92%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI+VPSNVTI LEGQ+LKVKGPLGELSRTYPREVK+++ E G ++V KA +TRRANQMHG Sbjct: 54 PIQVPSNVTIKLEGQDLKVKGPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHG 113 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEK+LQL+GVGYRA +E KDLVL+LGFSHPVRM IP L+VKVE Sbjct: 114 LFRTLTDNMVVGVSKGFEKRLQLVGVGYRANVEGKDLVLSLGFSHPVRMAIPATLQVKVE 173 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRI VSG+DKC+IG+FAASIR+WRPPEPYKGKGV+YANE Sbjct: 174 ENTRIVVSGFDKCSIGEFAASIRRWRPPEPYKGKGVRYANE 214 >ref|XP_004514093.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cicer arietinum] Length = 226 Score = 270 bits (689), Expect = 5e-70 Identities = 131/161 (81%), Positives = 147/161 (91%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI LEGQ+++VKGPLGELS TYPREVKV++ + G LKVSKA +TRRANQMHG Sbjct: 53 PIPVPSNVTIKLEGQDIQVKGPLGELSLTYPREVKVERQDEGILKVSKAVETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDN+VVGVSKGFEKKLQLIGVGYRAM+E D+VLNLGFSHPV+MTIPD LKVKVE Sbjct: 113 LFRTLTDNLVVGVSKGFEKKLQLIGVGYRAMVEGNDVVLNLGFSHPVKMTIPDGLKVKVE 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NT+ITVSGY+K IG FAASIRKWRPPEPYKGKG+KY +E Sbjct: 173 ENTKITVSGYNKSDIGQFAASIRKWRPPEPYKGKGIKYEDE 213 >gb|EYU44192.1| hypothetical protein MIMGU_mgv1a013253mg [Mimulus guttatus] Length = 226 Score = 267 bits (683), Expect = 2e-69 Identities = 128/161 (79%), Positives = 147/161 (91%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVT+V++GQ+LKVKGPLGEL+ TYPRE+ +DK +SG L+V KA +TRRANQMHG Sbjct: 53 PIPVPSNVTLVMDGQDLKVKGPLGELAITYPREILLDKDDSGILRVRKAVETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKLQL+G GYRA +E KD+VLNLGFSHPVRMTIPD L+VKV+ Sbjct: 113 LFRTLTDNMVVGVSKGFEKKLQLVGTGYRATVEGKDIVLNLGFSHPVRMTIPDGLQVKVD 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NT+I V+GYDK AIG FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 173 ENTKIAVTGYDKSAIGQFAASIRKWRPPEPYKGKGVKYADE 213 >ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1 [Glycine max] Length = 226 Score = 267 bits (683), Expect = 2e-69 Identities = 127/161 (78%), Positives = 147/161 (91%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVT+ LEGQ+++VKGPLGEL+ TYPREV V++ ESG L+V KA +TRRANQMHG Sbjct: 53 PIPVPSNVTVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDN+V+GVSKGF+KKLQL+GVGYRAM+E ++VLNLGFSHPV+MTIPD LKVKVE Sbjct: 113 LFRTLTDNLVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVE 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK +G FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 173 ENTRITVSGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADE 213 >ref|XP_006365808.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Solanum tuberosum] Length = 227 Score = 266 bits (681), Expect = 4e-69 Identities = 129/161 (80%), Positives = 145/161 (90%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVT+ +EGQ+LKVKGPLGE++ TYPREVK++K + G L+V KA +TRRANQMHG Sbjct: 54 PISVPSNVTLTMEGQDLKVKGPLGEMAITYPREVKLEKDDGGILRVRKAVETRRANQMHG 113 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKLQL+GVGYRA +E KD+VLNLGFSHPVRM IP L+VKVE Sbjct: 114 LFRTLTDNMVVGVSKGFEKKLQLVGVGYRATIEGKDIVLNLGFSHPVRMEIPAGLQVKVE 173 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 174 ENTRITVSGYDKSEIGQFAASIRKWRPPEPYKGKGVKYADE 214 >ref|XP_004252860.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Solanum lycopersicum] Length = 257 Score = 266 bits (680), Expect = 5e-69 Identities = 128/161 (79%), Positives = 145/161 (90%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVT+ +EGQ+LKVKGPLGE++ TYPREVK++K + G L+V KA +TRRANQMHG Sbjct: 84 PISVPSNVTLTMEGQDLKVKGPLGEMAITYPREVKLEKEDGGILRVRKAMETRRANQMHG 143 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKLQL+GVGYRA +E KD+VLNLGFSHPVRM +P L+VKVE Sbjct: 144 LFRTLTDNMVVGVSKGFEKKLQLVGVGYRATIEGKDIVLNLGFSHPVRMEVPAGLQVKVE 203 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 204 ENTRITVSGYDKSEIGQFAASIRKWRPPEPYKGKGVKYADE 244 >ref|XP_002892273.1| EMB2394 [Arabidopsis lyrata subsp. lyrata] gi|297338115|gb|EFH68532.1| EMB2394 [Arabidopsis lyrata subsp. lyrata] Length = 223 Score = 265 bits (677), Expect = 1e-68 Identities = 129/161 (80%), Positives = 144/161 (89%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI LEGQ+LKVKGPLGEL+ TYPREV++ K ESG L+V K +TRRANQMHG Sbjct: 50 PIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEESGLLRVKKTVETRRANQMHG 109 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKL L+GVGYRA +E K+LVLNLGFSHPV+M IPD LKVKVE Sbjct: 110 LFRTLTDNMVVGVSKGFEKKLILVGVGYRATVEGKELVLNLGFSHPVKMQIPDSLKVKVE 169 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAA++RKWRPPEPYKGKGVKY++E Sbjct: 170 ENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDE 210 >ref|XP_006418054.1| hypothetical protein EUTSA_v10008693mg [Eutrema salsugineum] gi|557095825|gb|ESQ36407.1| hypothetical protein EUTSA_v10008693mg [Eutrema salsugineum] Length = 226 Score = 265 bits (676), Expect = 2e-68 Identities = 128/161 (79%), Positives = 144/161 (89%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI LEGQ+LKVKGPLGEL+ TYPREV++ K +SG L+V K +TRRANQMHG Sbjct: 53 PIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEDSGFLRVKKTVETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKL L+GVGYRA +E K+LVLNLGFSHPV+M IPD LKVKVE Sbjct: 113 LFRTLTDNMVVGVSKGFEKKLILVGVGYRATVEGKELVLNLGFSHPVKMQIPDSLKVKVE 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAA++RKWRPPEPYKGKGVKY++E Sbjct: 173 ENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDE 213 >ref|XP_006304184.1| hypothetical protein CARUB_v10010237mg [Capsella rubella] gi|482572895|gb|EOA37082.1| hypothetical protein CARUB_v10010237mg [Capsella rubella] Length = 223 Score = 265 bits (676), Expect = 2e-68 Identities = 128/161 (79%), Positives = 144/161 (89%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI LEGQ+LKVKGPLGEL+ TYPREV++ K +SG L+V K +TRRANQMHG Sbjct: 50 PIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEDSGFLRVKKTVETRRANQMHG 109 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKL L+GVGYRA +E K+LVLNLGFSHPV+M IPD LKVKVE Sbjct: 110 LFRTLTDNMVVGVSKGFEKKLILVGVGYRATVEGKELVLNLGFSHPVKMQIPDSLKVKVE 169 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAA++RKWRPPEPYKGKGVKY++E Sbjct: 170 ENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDE 210 >ref|NP_172011.1| 50S ribosomal protein L6 [Arabidopsis thaliana] gi|75277355|sp|O23049.1|RK6_ARATH RecName: Full=50S ribosomal protein L6, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2394; Flags: Precursor gi|189096131|pdb|3BBO|I Chain I, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome gi|13430706|gb|AAK25975.1|AF360265_1 putative chloroplast 50S ribosomal protein L6 [Arabidopsis thaliana] gi|2388578|gb|AAB71459.1| Similar to Mycobacterium RlpF (gb|Z84395). ESTs gb|T75785,gb|R30580,gb|T04698 come from this gene [Arabidopsis thaliana] gi|14532906|gb|AAK64135.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis thaliana] gi|21553840|gb|AAM62933.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis thaliana] gi|332189681|gb|AEE27802.1| 50S ribosomal protein L6 [Arabidopsis thaliana] Length = 223 Score = 265 bits (676), Expect = 2e-68 Identities = 128/161 (79%), Positives = 144/161 (89%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI LEGQ+LKVKGPLGEL+ TYPREV++ K ESG L+V K +TRRANQMHG Sbjct: 50 PIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHG 109 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKL L+GVGYRA ++ K+LVLNLGFSHPV+M IPD LKVKVE Sbjct: 110 LFRTLTDNMVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVE 169 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAA++RKWRPPEPYKGKGVKY++E Sbjct: 170 ENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDE 210 >ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine max] Length = 226 Score = 265 bits (676), Expect = 2e-68 Identities = 126/161 (78%), Positives = 146/161 (90%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVT+ LEGQ+++VKGPLGEL+ +YPREV V++ ESG L+V KA +TRRANQMHG Sbjct: 53 PIPVPSNVTVKLEGQDIQVKGPLGELALSYPREVLVEREESGTLRVKKAVETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDN+V+GVSKGFEKKLQL+GVGYRAM+E ++VLNLGFSHPV+M IPD LKVKVE Sbjct: 113 LFRTLTDNLVIGVSKGFEKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMIIPDGLKVKVE 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK +G FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 173 ENTRITVSGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADE 213 >dbj|BAH20405.1| AT1G05190 [Arabidopsis thaliana] Length = 200 Score = 265 bits (676), Expect = 2e-68 Identities = 128/161 (79%), Positives = 144/161 (89%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI LEGQ+LKVKGPLGEL+ TYPREV++ K ESG L+V K +TRRANQMHG Sbjct: 27 PIAVPSNVTIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHG 86 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKL L+GVGYRA ++ K+LVLNLGFSHPV+M IPD LKVKVE Sbjct: 87 LFRTLTDNMVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVE 146 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAA++RKWRPPEPYKGKGVKY++E Sbjct: 147 ENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDE 187 >ref|XP_006447548.1| hypothetical protein CICLE_v10016578mg [Citrus clementina] gi|568830833|ref|XP_006469689.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Citrus sinensis] gi|557550159|gb|ESR60788.1| hypothetical protein CICLE_v10016578mg [Citrus clementina] Length = 225 Score = 263 bits (671), Expect = 6e-68 Identities = 131/161 (81%), Positives = 142/161 (88%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PIEVPSNVTI L GQ+LKVKGPLGELS YPREVKVD+ E L+V K +TRRANQMHG Sbjct: 53 PIEVPSNVTITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHG 111 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEKKLQ++GVGYRA LE + LVL+LGFSHPVRMTIPD +KV VE Sbjct: 112 LFRTLTDNMVVGVSKGFEKKLQMVGVGYRAALEGQVLVLSLGFSHPVRMTIPDGIKVNVE 171 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK AIG FAASIRKWRPPEPYKGKGVKY +E Sbjct: 172 ENTRITVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYVDE 212 >ref|XP_007223925.1| hypothetical protein PRUPE_ppa011034mg [Prunus persica] gi|462420861|gb|EMJ25124.1| hypothetical protein PRUPE_ppa011034mg [Prunus persica] Length = 226 Score = 262 bits (670), Expect = 8e-68 Identities = 129/161 (80%), Positives = 144/161 (89%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PIEVPSNV+I LEGQ L+VKGPLG+LS TYPREV V K +SG L+V KA +TRRANQMHG Sbjct: 53 PIEVPSNVSIKLEGQALEVKGPLGQLSMTYPREVLVQKEDSGFLRVRKALETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDNMVVGVSKGFEK+LQL+GVGYRA LE + LVL+LGFSHPVRM IPD ++VKVE Sbjct: 113 LFRTLTDNMVVGVSKGFEKRLQLVGVGYRATLEGRILVLSLGFSHPVRMDIPDGIQVKVE 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTR+ VSGYDK AIG FAASIRKWRPPEPYKGKGVKYA+E Sbjct: 173 ENTRVVVSGYDKSAIGQFAASIRKWRPPEPYKGKGVKYADE 213 >gb|AFK43716.1| unknown [Medicago truncatula] Length = 226 Score = 262 bits (669), Expect = 1e-67 Identities = 128/161 (79%), Positives = 142/161 (88%) Frame = +1 Query: 4 PIEVPSNVTIVLEGQELKVKGPLGELSRTYPREVKVDKLESGHLKVSKATDTRRANQMHG 183 PI VPSNVTI +EGQ KGPLGELS TYPREVKV++ E G LKVSKA +TRRANQMHG Sbjct: 53 PIPVPSNVTIKMEGQYFHAKGPLGELSLTYPREVKVERQEEGVLKVSKAVETRRANQMHG 112 Query: 184 LFRTLTDNMVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVRMTIPDDLKVKVE 363 LFRTLTDN+VVGVSKGFEKKLQLIGVGYRA +E ++VLNLGFSHPV+MTIP+ LKVKV+ Sbjct: 113 LFRTLTDNIVVGVSKGFEKKLQLIGVGYRATVEGNEVVLNLGFSHPVKMTIPEGLKVKVD 172 Query: 364 DNTRITVSGYDKCAIGDFAASIRKWRPPEPYKGKGVKYANE 486 +NTRITVSGYDK IG FAASIRKWRPPEPYKGKG+KY +E Sbjct: 173 ENTRITVSGYDKSEIGQFAASIRKWRPPEPYKGKGIKYEDE 213