BLASTX nr result
ID: Cocculus23_contig00006636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006636
(268 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop... 72 8e-11
ref|XP_006447548.1| hypothetical protein CICLE_v10016578mg [Citr... 67 2e-09
ref|XP_002320459.1| ribosomal protein L6 [Populus trichocarpa] g... 67 3e-09
ref|XP_007223925.1| hypothetical protein PRUPE_ppa011034mg [Prun... 64 2e-08
gb|AFK43716.1| unknown [Medicago truncatula] 64 3e-08
ref|XP_007045631.1| Ribosomal protein L6 family [Theobroma cacao... 63 4e-08
dbj|BAJ91776.1| predicted protein [Hordeum vulgare subsp. vulgar... 62 6e-08
dbj|BAJ84917.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 6e-08
ref|XP_004514093.1| PREDICTED: 50S ribosomal protein L6, chlorop... 60 2e-07
ref|XP_004252860.1| PREDICTED: 50S ribosomal protein L6, chlorop... 60 2e-07
ref|XP_004287942.1| PREDICTED: 50S ribosomal protein L6, chlorop... 60 3e-07
ref|NP_001051292.1| Os03g0751400 [Oryza sativa Japonica Group] g... 60 3e-07
gb|EXB83377.1| 50S ribosomal protein L6 [Morus notabilis] 60 4e-07
ref|XP_003557902.1| PREDICTED: 50S ribosomal protein L6, chlorop... 60 4e-07
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop... 60 4e-07
gb|ACU23468.1| unknown [Glycine max] 60 4e-07
dbj|BAJ92513.1| predicted protein [Hordeum vulgare subsp. vulgare] 59 5e-07
ref|XP_006858065.1| hypothetical protein AMTR_s00062p00057610 [A... 59 7e-07
ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop... 59 7e-07
gb|ACU19091.1| unknown [Glycine max] 59 7e-07
>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
product [Vitis vinifera]
Length = 226
Score = 72.0 bits (175), Expect = 8e-11
Identities = 31/46 (67%), Positives = 42/46 (91%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L+S F+G+R+ ++++VPVTR+GFLRKT+ECKESRIGK PIEVPS
Sbjct: 13 NLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPS 58
>ref|XP_006447548.1| hypothetical protein CICLE_v10016578mg [Citrus clementina]
gi|568830833|ref|XP_006469689.1| PREDICTED: 50S
ribosomal protein L6, chloroplastic-like [Citrus
sinensis] gi|557550159|gb|ESR60788.1| hypothetical
protein CICLE_v10016578mg [Citrus clementina]
Length = 225
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+LKS F G+R+ ++NVPV R+GF RKT+ECKESRIGK PIEVPS
Sbjct: 13 NLKSIFFGERNGFSMSNVPVNRVGFSRKTIECKESRIGKQPIEVPS 58
>ref|XP_002320459.1| ribosomal protein L6 [Populus trichocarpa]
gi|222861232|gb|EEE98774.1| ribosomal protein L6
[Populus trichocarpa]
Length = 227
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/46 (65%), Positives = 39/46 (84%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L+S F+G+R+ + +VPVTRIGFLRK +ECKESRIGK PI+VPS
Sbjct: 14 NLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPS 59
>ref|XP_007223925.1| hypothetical protein PRUPE_ppa011034mg [Prunus persica]
gi|462420861|gb|EMJ25124.1| hypothetical protein
PRUPE_ppa011034mg [Prunus persica]
Length = 226
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/46 (60%), Positives = 38/46 (82%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L+S F+G+R+ + +V VT +GFL+KT+ECKESRIGK PIEVPS
Sbjct: 13 NLRSAFLGERNGFSVCSVSVTHVGFLKKTIECKESRIGKQPIEVPS 58
>gb|AFK43716.1| unknown [Medicago truncatula]
Length = 226
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+ KS F+G+RS I++ P T +GF RKT ECKESRIGK PI VPS
Sbjct: 13 NFKSSFVGERSRIRISSAPATHVGFFRKTTECKESRIGKQPIPVPS 58
>ref|XP_007045631.1| Ribosomal protein L6 family [Theobroma cacao]
gi|508709566|gb|EOY01463.1| Ribosomal protein L6 family
[Theobroma cacao]
Length = 225
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L+S F+G+R+ I+++PVTR+ +RK VECKESRIGK PI+VPS
Sbjct: 12 NLRSAFLGERNAICISSIPVTRVSLVRKAVECKESRIGKQPIQVPS 57
>dbj|BAJ91776.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518460|dbj|BAJ88259.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|326526199|dbj|BAJ93276.1|
predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = +1
Query: 127 CHLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
C+ ++ F+G+ H+ +P R+GF+RKTVECKESRIGK PIEVPS
Sbjct: 12 CNSRTGFLGKSRGIHLRVIPAGRVGFVRKTVECKESRIGKKPIEVPS 58
>dbj|BAJ84917.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/47 (57%), Positives = 36/47 (76%)
Frame = +1
Query: 127 CHLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
C+ ++ F+G+ H+ +P R+GF+RKTVECKESRIGK PIEVPS
Sbjct: 25 CNSRTGFLGKSRGIHLRVIPAGRVGFVRKTVECKESRIGKKPIEVPS 71
>ref|XP_004514093.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cicer
arietinum]
Length = 226
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+ KS ++G+RS +++ P TR+G RKT ECKESRIGK PI VPS
Sbjct: 13 NFKSVYLGERSKLRVSSAPATRVGVFRKTTECKESRIGKQPIPVPS 58
>ref|XP_004252860.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Solanum
lycopersicum]
Length = 257
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +1
Query: 133 LKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
L+S F+G + H+++V V R+GF+ KTVECKESRIGK PI VPS
Sbjct: 45 LRSPFVGSLNGFHVSSVAVRRVGFVSKTVECKESRIGKQPISVPS 89
>ref|XP_004287942.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 226
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L+S F+G+R + + P T +GFL+K VECKESRIGK PIEVP+
Sbjct: 13 NLRSAFLGERKGFTVYSAPATNVGFLKKAVECKESRIGKQPIEVPA 58
>ref|NP_001051292.1| Os03g0751400 [Oryza sativa Japonica Group]
gi|28144880|gb|AAO32311.1| putative chloroplast 50S
ribosomal protein L6 [Oryza sativa Japonica Group]
gi|40538993|gb|AAR87250.1| putative ribosomal protein L6
[Oryza sativa Japonica Group]
gi|108711115|gb|ABF98910.1| 50S ribosomal protein L6,
putative, expressed [Oryza sativa Japonica Group]
gi|113549763|dbj|BAF13206.1| Os03g0751400 [Oryza sativa
Japonica Group] gi|125545742|gb|EAY91881.1| hypothetical
protein OsI_13529 [Oryza sativa Indica Group]
gi|125587939|gb|EAZ28603.1| hypothetical protein
OsJ_12590 [Oryza sativa Japonica Group]
gi|215697230|dbj|BAG91224.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 226
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +1
Query: 127 CHLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
C+ ++ F+G+R + +P R+GF+RKT+ECKESRIGK PIEVPS
Sbjct: 12 CNSRTGFLGKRQGICLHVIPAGRVGFVRKTIECKESRIGKKPIEVPS 58
>gb|EXB83377.1| 50S ribosomal protein L6 [Morus notabilis]
Length = 225
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/44 (56%), Positives = 37/44 (84%)
Frame = +1
Query: 136 KSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+S F+G+R+ +++VPV+R+GF++K +ECKESRIGK IEVPS
Sbjct: 14 RSVFLGERNGFSVSSVPVSRVGFVKKNIECKESRIGKQAIEVPS 57
>ref|XP_003557902.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like
[Brachypodium distachyon]
Length = 226
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +1
Query: 127 CHLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
C+ ++ F+G+ + +P R+GF+RKTVECKESRIGK PIEVPS
Sbjct: 12 CNSRTGFLGKSQGIRLRVIPAGRVGFVRKTVECKESRIGKKPIEVPS 58
>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
[Glycine max]
Length = 226
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+LKS F+G+ + +++VP +GF RKTVECKESRIGK PI VPS
Sbjct: 13 NLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPS 58
>gb|ACU23468.1| unknown [Glycine max]
Length = 226
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+LKS F+G+ + +++VP +GF RKTVECKESRIGK PI VPS
Sbjct: 13 NLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPS 58
>dbj|BAJ92513.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +1
Query: 136 KSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
++ F+G+ H+ +P R+GF+RKTVECKESRIGK PIEVPS
Sbjct: 5 RTGFLGKSRGIHLRVIPAGRVGFVRKTVECKESRIGKKPIEVPS 48
>ref|XP_006858065.1| hypothetical protein AMTR_s00062p00057610 [Amborella trichopoda]
gi|548862168|gb|ERN19532.1| hypothetical protein
AMTR_s00062p00057610 [Amborella trichopoda]
Length = 225
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +1
Query: 133 LKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
LKS+F G+++ + PV IGF RK VECKESR+GKHPIEVPS
Sbjct: 13 LKSKFWGEKNGRVHTSSPVIGIGFFRKNVECKESRVGKHPIEVPS 57
>ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine
max]
Length = 226
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L S F+G+ + ++ VP +GF+RKTVECKESRIGK PI VPS
Sbjct: 13 NLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPS 58
>gb|ACU19091.1| unknown [Glycine max]
Length = 226
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 130 HLKSEFIGQRSVTHIANVPVTRIGFLRKTVECKESRIGKHPIEVPS 267
+L S F+G+ + ++ VP +GF+RKTVECKESRIGK PI VPS
Sbjct: 13 NLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPS 58