BLASTX nr result
ID: Cocculus23_contig00006566
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00006566
(895 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18917.3| unnamed protein product [Vitis vinifera] 357 5e-96
ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi... 357 5e-96
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera] 357 5e-96
ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containi... 351 2e-94
gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis] 351 2e-94
ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily p... 349 7e-94
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,... 342 2e-91
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ... 340 3e-91
ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containi... 339 8e-91
ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citr... 339 8e-91
ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containi... 338 2e-90
ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Popu... 337 3e-90
ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containi... 337 4e-90
ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containi... 335 1e-89
ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containi... 333 5e-89
ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phas... 331 3e-88
ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Caps... 330 5e-88
ref|NP_564110.1| pentatricopeptide repeat-containing protein [Ar... 328 2e-87
ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containi... 326 9e-87
ref|XP_002890377.1| pentatricopeptide repeat-containing protein ... 326 9e-87
>emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 357 bits (915), Expect = 5e-96
Identities = 173/208 (83%), Positives = 188/208 (90%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRL CP D ITYNFLIESHCRDDNLEEA+K+LN VKKG
Sbjct: 291 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKG 349
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C NAS+FNPIF CIS++ DVN+AHRM AKM LKC+PNTVTYN+LMRMFA KKS DMVL
Sbjct: 350 CNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVL 409
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KL+KEMDENE+EPN NTYRVLIS FCG+GHWN AYSFFKEMIEEKCL+PSLPVYEMVLQQ
Sbjct: 410 KLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQ 469
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKMV RGF + RPL
Sbjct: 470 LRKAGQLKKHEELVEKMVNRGFVT-RPL 496
Score = 70.5 bits (171), Expect = 9e-10
Identities = 45/191 (23%), Positives = 79/191 (41%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R + F+ +K P D + Y L+ CR N+ EA +V +M G PN
Sbjct: 193 KKRRAIEAQSFFDSLKDRFEP-DVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVY 251
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
T++ + + + AH + ++M + C PN +T+N LMR+ + VL++ +M
Sbjct: 252 TYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQM 311
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
P+ TY LI C + A + +K + + + + K G
Sbjct: 312 KRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSV--KKGCNLNASSFNPIFGCISKLGD 369
Query: 559 IKKHEELVEKM 591
+ + KM
Sbjct: 370 VNSAHRMFAKM 380
Score = 58.9 bits (141), Expect = 3e-06
Identities = 38/154 (24%), Positives = 71/154 (46%)
Frame = +1
Query: 142 EAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLM 321
EA+ N+M GC P+ F+ + +S+ + A + + +P+ V Y L+
Sbjct: 164 EAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLV 222
Query: 322 RMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCL 501
+ + ++ EM ++PNV TY ++I C G RA+ F EMI+ C
Sbjct: 223 HGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC- 281
Query: 502 KPSLPVYEMVLQQLRKAGQIKKHEELVEKMVERG 603
P+ + +++ KAG+ +K ++ +M G
Sbjct: 282 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLG 315
>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 357 bits (915), Expect = 5e-96
Identities = 173/208 (83%), Positives = 188/208 (90%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRL CP D ITYNFLIESHCRDDNLEEA+K+LN VKKG
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKG 384
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C NAS+FNPIF CIS++ DVN+AHRM AKM LKC+PNTVTYN+LMRMFA KKS DMVL
Sbjct: 385 CNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVL 444
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KL+KEMDENE+EPN NTYRVLIS FCG+GHWN AYSFFKEMIEEKCL+PSLPVYEMVLQQ
Sbjct: 445 KLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQ 504
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKMV RGF + RPL
Sbjct: 505 LRKAGQLKKHEELVEKMVNRGFVT-RPL 531
Score = 72.0 bits (175), Expect = 3e-10
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 34/231 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIES--------------------- 117
L+R +VKAG + + FN+M+ C D I ++ +I S
Sbjct: 187 LVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF 246
Query: 118 -------------HCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
CR N+ EA +V +M G PN T++ + + + AH
Sbjct: 247 EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHD 306
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ ++M + C PN +T+N LMR+ + VL++ +M P+ TY LI C
Sbjct: 307 VFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHC 366
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
+ A + +K + + + + K G + + KM
Sbjct: 367 RDDNLEEAVKILNSV--KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKM 415
Score = 64.7 bits (156), Expect = 5e-08
Identities = 43/186 (23%), Positives = 83/186 (44%)
Frame = +1
Query: 46 QVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCI 225
Q+ + MK + T+ L+ + + EA+ N+M GC P+ F+ + +
Sbjct: 167 QLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSL 226
Query: 226 SEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNV 405
S+ + A + + +P+ V Y L+ + + ++ EM ++PNV
Sbjct: 227 SKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNV 285
Query: 406 NTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVE 585
TY ++I C G RA+ F EMI+ C P+ + +++ KAG+ +K ++
Sbjct: 286 YTYSIVIDALCRSGQITRAHDVFSEMIDVGC-DPNAITFNNLMRVHVKAGRTEKVLQVYN 344
Query: 586 KMVERG 603
+M G
Sbjct: 345 QMKRLG 350
>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 357 bits (915), Expect = 5e-96
Identities = 173/208 (83%), Positives = 188/208 (90%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRL CP D ITYNFLIESHCRDDNLEEA+K+LN VKKG
Sbjct: 1358 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNS-VKKG 1416
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C NAS+FNPIF CIS++ DVN+AHRM AKM LKC+PNTVTYN+LMRMFA KKS DMVL
Sbjct: 1417 CNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVL 1476
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KL+KEMDENE+EPN NTYRVLIS FCG+GHWN AYSFFKEMIEEKCL+PSLPVYEMVLQQ
Sbjct: 1477 KLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQ 1536
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKMV RGF + RPL
Sbjct: 1537 LRKAGQLKKHEELVEKMVNRGFVT-RPL 1563
Score = 72.0 bits (175), Expect = 3e-10
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 34/231 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIES--------------------- 117
L+R +VKAG + + FN+M+ C D I ++ +I S
Sbjct: 1219 LVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRF 1278
Query: 118 -------------HCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
CR N+ EA +V +M G PN T++ + + + AH
Sbjct: 1279 EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHD 1338
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ ++M + C PN +T+N LMR+ + VL++ +M P+ TY LI C
Sbjct: 1339 VFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHC 1398
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
+ A + +K + + + + K G + + KM
Sbjct: 1399 RDDNLEEAVKILNSV--KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKM 1447
Score = 63.5 bits (153), Expect = 1e-07
Identities = 43/186 (23%), Positives = 82/186 (44%)
Frame = +1
Query: 46 QVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCI 225
Q+ + MK + T+ L+ + + EA+ N+M GC P+ F+ + +
Sbjct: 1199 QLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSL 1258
Query: 226 SEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNV 405
S+ + A + + +P+ V Y L+ + + ++ EM + PNV
Sbjct: 1259 SKKRRAIEAQSFFDSLKD-RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNV 1317
Query: 406 NTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVE 585
TY ++I C G RA+ F EMI+ C P+ + +++ KAG+ +K ++
Sbjct: 1318 YTYSIVIDALCRSGQITRAHDVFSEMIDVGC-DPNAITFNNLMRVHVKAGRTEKVLQVYN 1376
Query: 586 KMVERG 603
+M G
Sbjct: 1377 QMKRLG 1382
>ref|XP_004292931.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 529
Score = 351 bits (901), Expect = 2e-94
Identities = 168/208 (80%), Positives = 187/208 (89%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRL C AD ITYNFLIE HC+D+N+EEA KVLN MVKKG
Sbjct: 321 LMRVHVKAGRTEKVLQVYNQMKRLGCNADVITYNFLIECHCKDENVEEAAKVLNLMVKKG 380
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C+PNASTFNPIFRCI++++DVN AHRM+ KM L CK NTVTYNVLM+MFA KS DMVL
Sbjct: 381 CSPNASTFNPIFRCIAKLKDVNGAHRMYTKMKDLDCKANTVTYNVLMQMFAESKSTDMVL 440
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEMDENEVEPNVNTY+VLISM+C MGHWN AY FF+EMIEEKCLKPS+PVYEMVL+Q
Sbjct: 441 KLKKEMDENEVEPNVNTYKVLISMYCAMGHWNNAYKFFREMIEEKCLKPSMPVYEMVLKQ 500
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR AGQ+KKHEELVEKMV+RGF + RPL
Sbjct: 501 LRNAGQLKKHEELVEKMVDRGFVT-RPL 527
Score = 78.6 bits (192), Expect = 3e-12
Identities = 48/191 (25%), Positives = 83/191 (43%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R + F+ +K AD I Y L+ CR N+ EA +V N+M G PN
Sbjct: 223 KKRRASEAQAFFDSLKH-KFEADVILYTSLVNGWCRAGNIAEAERVFNEMKAAGIEPNVY 281
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
+++ + + + AH + A+M C PN++T+N LMR+ + VL++ +M
Sbjct: 282 SYSIVIDALCRCGQITRAHDVFAEMIDAGCNPNSITFNNLMRVHVKAGRTEKVLQVYNQM 341
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+V TY LI C + A M+++ C P+ + + + + K
Sbjct: 342 KRLGCNADVITYNFLIECHCKDENVEEAAKVLNLMVKKGC-SPNASTFNPIFRCIAKLKD 400
Query: 559 IKKHEELVEKM 591
+ + KM
Sbjct: 401 VNGAHRMYTKM 411
Score = 59.7 bits (143), Expect = 2e-06
Identities = 41/185 (22%), Positives = 83/185 (44%)
Frame = +1
Query: 49 VFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCIS 228
V + MK + T++ L+ + R EA+ N+M + G +P+ F+ + +
Sbjct: 163 VIDLMKARNVEITVETFSILVRRYVRAGLAAEAVHAFNRMEEYGVSPDRIAFSVVIGILC 222
Query: 229 EIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVN 408
+ + + A + K + + + Y L+ + + ++ EM +EPNV
Sbjct: 223 KKRRASEAQAFFDSLKH-KFEADVILYTSLVNGWCRAGNIAEAERVFNEMKAAGIEPNVY 281
Query: 409 TYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEK 588
+Y ++I C G RA+ F EMI+ C P+ + +++ KAG+ +K ++ +
Sbjct: 282 SYSIVIDALCRCGQITRAHDVFAEMIDAGC-NPNSITFNNLMRVHVKAGRTEKVLQVYNQ 340
Query: 589 MVERG 603
M G
Sbjct: 341 MKRLG 345
>gb|EXB81505.1| hypothetical protein L484_014313 [Morus notabilis]
Length = 535
Score = 351 bits (900), Expect = 2e-94
Identities = 167/208 (80%), Positives = 189/208 (90%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRT+KVLQVFNQMKRL C AD ITYNFL++ HC+D+NL++A KVLN MVKKG
Sbjct: 329 LMRVHVKAGRTQKVLQVFNQMKRLKCEADVITYNFLVDCHCKDENLDDAAKVLNLMVKKG 388
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PN+STFNPIFR +++++DVNAAHRM+AKM +LKCKPNTVTYNVLM+MFA KS DMVL
Sbjct: 389 CNPNSSTFNPIFRLVAKLKDVNAAHRMYAKMKELKCKPNTVTYNVLMQMFAESKSMDMVL 448
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLK+EMDE+EVEPNVNTYRVLI MFCGMGHWN AY FF+EMIEEKCLKPS PVYEMVL+Q
Sbjct: 449 KLKEEMDESEVEPNVNTYRVLIVMFCGMGHWNNAYRFFREMIEEKCLKPSFPVYEMVLEQ 508
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKMV RGF + RPL
Sbjct: 509 LRKAGQLKKHEELVEKMVARGFVT-RPL 535
Score = 78.2 bits (191), Expect = 4e-12
Identities = 49/193 (25%), Positives = 85/193 (44%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R + F+ +K P D + Y LI CR N+ EA V ++M K G PN
Sbjct: 231 KKRRATEAQSFFDGLKDKFEP-DVVLYTNLIHGWCRAGNISEAESVFSEMKKAGIKPNVY 289
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
T+ + + + H + ++M + C+PN VT+N LMR+ VL++ +M
Sbjct: 290 TYTIVIDALCRCGQITRGHDVFSEMIDVGCQPNAVTFNNLMRVHVKAGRTQKVLQVFNQM 349
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ E +V TY L+ C + + A M+++ C P+ + + + + K
Sbjct: 350 KRLKCEADVITYNFLVDCHCKDENLDDAAKVLNLMVKKGC-NPNSSTFNPIFRLVAKLKD 408
Query: 559 IKKHEELVEKMVE 597
+ + KM E
Sbjct: 409 VNAAHRMYAKMKE 421
Score = 62.4 bits (150), Expect = 2e-07
Identities = 42/181 (23%), Positives = 81/181 (44%)
Frame = +1
Query: 49 VFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCIS 228
V + MK + T++ L+ + R EA+ N+M GC P+ F+ + +
Sbjct: 171 VLDLMKTRNVEITIETFSILVRRYVRAGFAAEAVHAFNRMDDYGCKPDKIAFSVVISNLC 230
Query: 229 EIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVN 408
+ + A + K +P+ V Y L+ + + + EM + ++PNV
Sbjct: 231 KKRRATEAQSFFDGLKD-KFEPDVVLYTNLIHGWCRAGNISEAESVFSEMKKAGIKPNVY 289
Query: 409 TYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEK 588
TY ++I C G R + F EMI+ C +P+ + +++ KAG+ +K ++ +
Sbjct: 290 TYTIVIDALCRCGQITRGHDVFSEMIDVGC-QPNAVTFNNLMRVHVKAGRTQKVLQVFNQ 348
Query: 589 M 591
M
Sbjct: 349 M 349
>ref|XP_007017910.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508723238|gb|EOY15135.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 532
Score = 349 bits (896), Expect = 7e-94
Identities = 167/208 (80%), Positives = 186/208 (89%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKR CPADTITYNFLIESHCRDDNL+EAIKVLN M+KK
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRCGCPADTITYNFLIESHCRDDNLDEAIKVLNLMIKKE 385
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PN STFN IF+CI ++QDVNAAHRM+AKM L C+PNTVTYN+LMRMFAG KS DMVL
Sbjct: 386 CIPNPSTFNTIFKCIEKLQDVNAAHRMYAKMKDLNCRPNTVTYNILMRMFAGAKSTDMVL 445
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEMDENEVEPNVNTYR+LI+M+CG GHWN AY FF EMIEEK LKPS+ +Y+MVL+Q
Sbjct: 446 KLKKEMDENEVEPNVNTYRILITMYCGKGHWNNAYKFFNEMIEEKGLKPSMSLYQMVLEQ 505
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKA Q+KKHEELVEKMV+RGF + RPL
Sbjct: 506 LRKAEQLKKHEELVEKMVDRGFVT-RPL 532
Score = 80.1 bits (196), Expect = 1e-12
Identities = 49/191 (25%), Positives = 87/191 (45%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R E+ F+++K P D I Y LI CR N+ EA +V +M G PN
Sbjct: 228 KKRRAEEAQTFFDKLKDNFEP-DVILYTSLINGWCRARNISEAERVFKEMKMAGIKPNVY 286
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
++ + + + AH + A+M + C+PN++T+N LMR+ + VL++ +M
Sbjct: 287 SYTIVIDALCRCGQITRAHDVFAEMIDVGCEPNSITFNNLMRVHVKAGRTEKVLQVYNQM 346
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ TY LI C + + A MI+++C+ P+ + + + + K
Sbjct: 347 KRCGCPADTITYNFLIESHCRDDNLDEAIKVLNLMIKKECI-PNPSTFNTIFKCIEKLQD 405
Query: 559 IKKHEELVEKM 591
+ + KM
Sbjct: 406 VNAAHRMYAKM 416
Score = 66.6 bits (161), Expect = 1e-08
Identities = 43/181 (23%), Positives = 83/181 (45%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + T++ LI + R EA+ N+M GC P+ F+ + + + +
Sbjct: 172 MKAKNVDVSIETFSILIRRYVRAGLAAEAVHAFNRMEDYGCVPDKIAFSIVISSLCKKRR 231
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
A K+ +P+ + Y L+ + ++ ++ KEM ++PNV +Y +
Sbjct: 232 AEEAQTFFDKLKD-NFEPDVILYTSLINGWCRARNISEAERVFKEMKMAGIKPNVYSYTI 290
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVER 600
+I C G RA+ F EMI+ C +P+ + +++ KAG+ +K ++ +M
Sbjct: 291 VIDALCRCGQITRAHDVFAEMIDVGC-EPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRC 349
Query: 601 G 603
G
Sbjct: 350 G 350
>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 528
Score = 342 bits (876), Expect = 2e-91
Identities = 161/208 (77%), Positives = 187/208 (89%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
L+RVHVKAGRTEKVLQV+NQMKR+ CP DT+TYNFLIESHC+D NL+EA+KVLN MVKKG
Sbjct: 322 LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKG 381
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C+PNASTFN +F I++++DVN AHR++AKM +LKCK NTVTYN+LMRMF KS DMVL
Sbjct: 382 CSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVL 441
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEMDE++VEPNVNTY VLI+M+CGMGHWN AY FF+EM+EEKCLKPSLPVYE VLQQ
Sbjct: 442 KLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQ 501
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELV MV+RGFA+ RPL
Sbjct: 502 LRKAGQLKKHEELVAVMVDRGFAT-RPL 528
Score = 87.4 bits (215), Expect = 7e-15
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIE---------------------- 114
L+R +V+AG + + FN+M+ +C D I ++ LI
Sbjct: 183 LIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKF 242
Query: 115 ------------SHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
CR N+ EA +V +M GC PN T+ + + + AH
Sbjct: 243 EPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHD 302
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ A+M + C+PN++T+N L+R+ + VL++ +M P+ TY LI C
Sbjct: 303 VFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHC 362
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVE 597
G+ + A M+++ C P+ + + + K + L KM E
Sbjct: 363 KDGNLDEALKVLNSMVKKGC-SPNASTFNGLFGSIAKLRDVNGAHRLYAKMKE 414
Score = 87.4 bits (215), Expect = 7e-15
Identities = 50/179 (27%), Positives = 87/179 (48%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
L+R +AG + +VF +MK C + TY +I++ CR + A V +M+ G
Sbjct: 252 LVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVG 311
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PN+ TFN + R + +++ +M ++ C P+TVTYN L+ + D L
Sbjct: 312 CEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEAL 371
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQ 537
K+ M + PN +T+ L + N A+ + +M E KC K + Y ++++
Sbjct: 372 KVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKC-KANTVTYNILMR 429
Score = 63.5 bits (153), Expect = 1e-07
Identities = 45/186 (24%), Positives = 81/186 (43%)
Frame = +1
Query: 46 QVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCI 225
QV + MK + T++ LI + R EA+ N+M C P+ F+ + +
Sbjct: 163 QVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISIL 222
Query: 226 SEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNV 405
+ A + K +P+ + Y L+R + + ++ EM PNV
Sbjct: 223 CRKRRATEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNV 281
Query: 406 NTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVE 585
TY ++I C G RA+ F EM++ C +P+ + +L+ KAG+ +K ++
Sbjct: 282 YTYTIVIDALCRCGQITRAHDVFAEMLDVGC-EPNSITFNNLLRVHVKAGRTEKVLQVYN 340
Query: 586 KMVERG 603
+M G
Sbjct: 341 QMKRMG 346
>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 530
Score = 340 bits (873), Expect = 3e-91
Identities = 161/208 (77%), Positives = 182/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRL C ADTI+YNFLIESHC+D+NL+EA+KVL+ MVKKG
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
PNASTFN IF CI+E+ DVN AHRM+AKM +LKC PNT+TYN+LMRMFA KS DMVL
Sbjct: 383 VAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVL 442
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEMDE+EVEPNVNTYR+LI MFC GHWN AY+ KEM+EEKCLKP+L +YE VL+
Sbjct: 443 KLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLEL 502
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR AGQ+KKHEELVEKMV RGF SPRPL
Sbjct: 503 LRNAGQLKKHEELVEKMVARGFVSPRPL 530
Score = 89.4 bits (220), Expect = 2e-15
Identities = 51/193 (26%), Positives = 95/193 (49%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
+AG K +VF+ MK + TY+ +I+S CR + A V ++M+ GC PNA
Sbjct: 259 RAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAV 318
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
TFN + R + +++ +M +L C +T++YN L+ ++ D +K+ M
Sbjct: 319 TFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTM 378
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ V PN +T+ + + N A+ + +M E KC+ P+ Y ++++ +
Sbjct: 379 VKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCM-PNTLTYNILMRMFADSKS 437
Query: 559 IKKHEELVEKMVE 597
I +L ++M E
Sbjct: 438 IDMVLKLKKEMDE 450
Score = 68.9 bits (167), Expect = 2e-09
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 7/245 (2%)
Frame = +1
Query: 94 TYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHRMHAKM 273
T++ L+ + R EA+ N+M GC P+ +F+ + + + + + A +
Sbjct: 180 TFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSL 239
Query: 274 NQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFCGMGHW 453
K +P+ + Y L+ + ++ +M E V+PNV TY ++I C G
Sbjct: 240 KH-KFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQI 298
Query: 454 NRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVERGFA----SPRP 621
RA+ F EMI+ C P+ + +++ KAG+ +K ++ +M G A S
Sbjct: 299 TRAHDVFSEMIDAGC-DPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNF 357
Query: 622 L*RESC*QSSDDTAIRD-SYKTSTGVAPWRIDTVNKMLCLIAK--ELQGLH*QSGKPPLS 792
L C + D A++ GVAP T N + IA+ ++ G H K
Sbjct: 358 LIESHCKDENLDEAVKVLDTMVKKGVAP-NASTFNSIFGCIAELHDVNGAHRMYAK---- 412
Query: 793 VKDLK 807
+K+LK
Sbjct: 413 MKELK 417
Score = 66.2 bits (160), Expect = 2e-08
Identities = 44/193 (22%), Positives = 82/193 (42%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R + F+ +K P D I Y L+ CR ++ +A +V + M + G PN
Sbjct: 225 KKRRASEAELFFDSLKHKFEP-DVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVY 283
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
T++ + + + AH + ++M C PN VT+N LMR+ + VL++ +M
Sbjct: 284 TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQM 343
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ +Y LI C + + A M+ +K + P+ + + + +
Sbjct: 344 KRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMV-KKGVAPNASTFNSIFGCIAELHD 402
Query: 559 IKKHEELVEKMVE 597
+ + KM E
Sbjct: 403 VNGAHRMYAKMKE 415
>ref|XP_006473716.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Citrus sinensis]
Length = 538
Score = 339 bits (870), Expect = 8e-91
Identities = 161/208 (77%), Positives = 183/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKA RTEKVLQV+NQMKRL C ADTITYNFLI+ HC+D LE+AIKVLN MV+KG
Sbjct: 332 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 391
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PNASTFN IFRCIS++ DVN AHRM+ KM LKC+PNTVTYN+LM+MFA KS DMVL
Sbjct: 392 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 451
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEM+ENEVEPNVNTYR+LI+M+CGMGHWN AY + +EMIEEKCLKP VYEMVLQQ
Sbjct: 452 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 511
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR+AGQ++KHEELVEKMV+RGF + RPL
Sbjct: 512 LRRAGQLQKHEELVEKMVDRGFTA-RPL 538
Score = 88.6 bits (218), Expect = 3e-15
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPAD------------------------------- 87
L+R +V+AG + + FN+M+ C D
Sbjct: 193 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 252
Query: 88 ---TITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
I Y L+ CR N+ EA +V +M G PN T++ + + + AH
Sbjct: 253 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 312
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ A+M ++ C+PN++T+N LMR+ + VL++ +M E + TY LI C
Sbjct: 313 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 372
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
G A M+ + C P+ + M+ + + K G + + KM
Sbjct: 373 KDGKLEDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKM 422
Score = 66.2 bits (160), Expect = 2e-08
Identities = 42/181 (23%), Positives = 83/181 (45%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + T++ L+ + R EA+ N+M + GC P+ F+ + + +
Sbjct: 178 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 237
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
+ A + K +P+ + Y L+R + + ++ +EM ++PNV TY +
Sbjct: 238 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 296
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVER 600
+I C G RA+ F EM+E C +P+ + +++ KA + +K ++ +M
Sbjct: 297 VIDALCRCGQITRAHDVFAEMLEVGC-EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 355
Query: 601 G 603
G
Sbjct: 356 G 356
>ref|XP_006435257.1| hypothetical protein CICLE_v10000789mg [Citrus clementina]
gi|557537379|gb|ESR48497.1| hypothetical protein
CICLE_v10000789mg [Citrus clementina]
Length = 541
Score = 339 bits (870), Expect = 8e-91
Identities = 161/208 (77%), Positives = 183/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKA RTEKVLQV+NQMKRL C ADTITYNFLI+ HC+D LE+AIKVLN MV+KG
Sbjct: 335 LMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHCKDGKLEDAIKVLNSMVRKG 394
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PNASTFN IFRCIS++ DVN AHRM+ KM LKC+PNTVTYN+LM+MFA KS DMVL
Sbjct: 395 CNPNASTFNMIFRCISKLGDVNGAHRMYGKMKDLKCEPNTVTYNILMQMFATSKSTDMVL 454
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEM+ENEVEPNVNTYR+LI+M+CGMGHWN AY + +EMIEEKCLKP VYEMVLQQ
Sbjct: 455 KLKKEMEENEVEPNVNTYRILITMYCGMGHWNNAYKYIREMIEEKCLKPGSSVYEMVLQQ 514
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR+AGQ++KHEELVEKMV+RGF + RPL
Sbjct: 515 LRRAGQLQKHEELVEKMVDRGFTA-RPL 541
Score = 88.6 bits (218), Expect = 3e-15
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 34/231 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPAD------------------------------- 87
L+R +V+AG + + FN+M+ C D
Sbjct: 196 LVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRRASEAQSFFDSLKDKF 255
Query: 88 ---TITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
I Y L+ CR N+ EA +V +M G PN T++ + + + AH
Sbjct: 256 EPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSIVIDALCRCGQITRAHD 315
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ A+M ++ C+PN++T+N LMR+ + VL++ +M E + TY LI C
Sbjct: 316 VFAEMLEVGCEPNSITFNNLMRVHVKASRTEKVLQVYNQMKRLGCEADTITYNFLIDCHC 375
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
G A M+ + C P+ + M+ + + K G + + KM
Sbjct: 376 KDGKLEDAIKVLNSMVRKGC-NPNASTFNMIFRCISKLGDVNGAHRMYGKM 425
Score = 66.2 bits (160), Expect = 2e-08
Identities = 42/181 (23%), Positives = 83/181 (45%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + T++ L+ + R EA+ N+M + GC P+ F+ + + +
Sbjct: 181 MKSRNVEITVDTFSILVRRYVRAGLAAEAVHAFNRMEEYGCAPDKIAFSIVISILCRKRR 240
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
+ A + K +P+ + Y L+R + + ++ +EM ++PNV TY +
Sbjct: 241 ASEAQSFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFREMKMAGIQPNVYTYSI 299
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVER 600
+I C G RA+ F EM+E C +P+ + +++ KA + +K ++ +M
Sbjct: 300 VIDALCRCGQITRAHDVFAEMLEVGC-EPNSITFNNLMRVHVKASRTEKVLQVYNQMKRL 358
Query: 601 G 603
G
Sbjct: 359 G 359
>ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 338 bits (866), Expect = 2e-90
Identities = 156/204 (76%), Positives = 183/204 (89%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
L+RVH++AGRTEKVLQV+NQMKRL C AD ITYNFLIE+HC+DDNL EAIKVLN M K
Sbjct: 328 LIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKND 387
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
CTPNAS+FNPIFRCI++ QDVN AHRM A+M ++ CKPNTVTYN+LMRMFA KSADM+
Sbjct: 388 CTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIF 447
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEMDE EVEPN NTYR LI+++CGMGHWN AY FF+EMI+EKC+KPS+P+Y+MVL++
Sbjct: 448 KLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEE 507
Query: 541 LRKAGQIKKHEELVEKMVERGFAS 612
LRKAGQ+KKHEELV+KMVERGFAS
Sbjct: 508 LRKAGQLKKHEELVDKMVERGFAS 531
Score = 75.1 bits (183), Expect = 3e-11
Identities = 52/235 (22%), Positives = 92/235 (39%), Gaps = 34/235 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPAD------------------------------- 87
L+R +V+AG + + FN+M+ C AD
Sbjct: 189 LVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHKF 248
Query: 88 ---TITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
I Y L+ CR ++ EA V +M G +PN T++ + + + AH
Sbjct: 249 EPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHD 308
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ A+M C PN+VT+N L+R+ + VL++ +M ++ TY LI C
Sbjct: 309 VFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHC 368
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVERG 603
+ A M + C P+ + + + + K+ + + +M E G
Sbjct: 369 KDDNLGEAIKVLNSMAKNDC-TPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVG 422
Score = 60.8 bits (146), Expect = 7e-07
Identities = 40/177 (22%), Positives = 76/177 (42%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + +T++ L+ + R EA+ N+M GC + F+ + + + +
Sbjct: 174 MKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISILCKKRR 233
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
A + K +P+ + Y L+ + + +EM + PNV TY +
Sbjct: 234 AVEAQSFFDNLKH-KFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSI 292
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
+I C G RA+ F EM++ C S+ ++ LR AG+ +K ++ +M
Sbjct: 293 VIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLR-AGRTEKVLQVYNQM 348
>ref|XP_002307751.2| hypothetical protein POPTR_0005s26670g [Populus trichocarpa]
gi|550339796|gb|EEE94747.2| hypothetical protein
POPTR_0005s26670g [Populus trichocarpa]
Length = 533
Score = 337 bits (865), Expect = 3e-90
Identities = 156/208 (75%), Positives = 184/208 (88%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMR+HVKAGRTEKVLQV+NQMKRL C DT+TYNFLIE+HC+D+NLE+AIKV+ M KKG
Sbjct: 327 LMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKG 386
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PNASTFN +F CI+++ DVNAAHRM+ KM +L C+ NTVTYN LM+MF KS DMVL
Sbjct: 387 CAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVL 446
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLK EMDEN++EPNVNTY+VLI+M+CGMGHWN AY FF+EMI+EKCL+PSLPVY+MVLQQ
Sbjct: 447 KLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQ 506
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKMV+RGF + RPL
Sbjct: 507 LRKAGQLKKHEELVEKMVDRGFVT-RPL 533
Score = 87.0 bits (214), Expect = 9e-15
Identities = 46/166 (27%), Positives = 83/166 (50%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
L+R +AG + +VF +MK + TY+ +I+S CR + A + +M+ G
Sbjct: 257 LVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAG 316
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PN+ T+N + R + +++ +M +L C+P+TVTYN L+ ++ + +
Sbjct: 317 CQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAI 376
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKC 498
K+ M + PN +T+ L +G N A+ +K+M E C
Sbjct: 377 KVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNC 422
Score = 84.7 bits (208), Expect = 4e-14
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIE---------------------- 114
LMR +V+AG + + FN+M+ +C D I ++ LI
Sbjct: 188 LMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDKF 247
Query: 115 ------------SHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
CR N+ EA +V +M G PN T++ + + + AH
Sbjct: 248 EPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHD 307
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ A+M C+PN++TYN LMR+ + VL++ +M EP+ TY LI C
Sbjct: 308 IFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHC 367
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVE 597
+ A M ++ C P+ + + + K G + + +KM E
Sbjct: 368 KDENLEDAIKVIGLMAKKGC-APNASTFNTLFGCIAKLGDVNAAHRMYKKMKE 419
Score = 64.7 bits (156), Expect = 5e-08
Identities = 44/185 (23%), Positives = 82/185 (44%)
Frame = +1
Query: 49 VFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCIS 228
V + MK T++ L+ + R EAI N+M C P+ F+ + +
Sbjct: 169 VIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILC 228
Query: 229 EIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVN 408
+ + A + K +P+ + Y L+R + + ++ EM ++PNV
Sbjct: 229 RKRRASEAQEFFDSLKD-KFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVY 287
Query: 409 TYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEK 588
TY ++I C G RA+ F EM++ C +P+ Y +++ KAG+ +K ++ +
Sbjct: 288 TYSIVIDSLCRCGQITRAHDIFAEMLDAGC-QPNSITYNSLMRIHVKAGRTEKVLQVYNQ 346
Query: 589 MVERG 603
M G
Sbjct: 347 MKRLG 351
>ref|XP_004500913.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cicer arietinum]
Length = 530
Score = 337 bits (864), Expect = 4e-90
Identities = 160/208 (76%), Positives = 183/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRL C ADTI+YNF+IESHC+D+NL+EA+KVL+ MVKKG
Sbjct: 324 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTMVKKG 383
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
PNASTFN IF CI+E+ DVN AHRM+AKM +LKC+PNT+TYN+LMRMF KS DMVL
Sbjct: 384 VDPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCRPNTLTYNILMRMFVDSKSIDMVL 443
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KLKKEMDE++VEPNVNTYR+LI MFC GHWN AY KEM+EEKCLKP+L +YEMVL+Q
Sbjct: 444 KLKKEMDESQVEPNVNTYRILILMFCEKGHWNNAYKLMKEMVEEKCLKPNLSIYEMVLEQ 503
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKMV RGF S RPL
Sbjct: 504 LRKAGQLKKHEELVEKMVARGFVS-RPL 530
Score = 90.9 bits (224), Expect = 6e-16
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 4/197 (2%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
+AG K +VF+ MK + TY+ +I+S CR + A V ++M+ GC PNA
Sbjct: 260 RAGNISKAEEVFSDMKVAGIKPNVYTYSIVIDSLCRSGQITRAHDVFSEMIDAGCDPNAV 319
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
TFN + R + +++ +M +L C +T++YN ++ ++ D +K+ M
Sbjct: 320 TFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFIIESHCKDENLDEAVKVLDTM 379
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ V+PN +T+ + + N A+ + +M E KC +P+ Y ++++ +
Sbjct: 380 VKKGVDPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKC-RPNTLTYNILMRMFVDSKS 438
Query: 559 I----KKHEELVEKMVE 597
I K +E+ E VE
Sbjct: 439 IDMVLKLKKEMDESQVE 455
Score = 65.5 bits (158), Expect = 3e-08
Identities = 40/173 (23%), Positives = 81/173 (46%)
Frame = +1
Query: 94 TYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHRMHAKM 273
T+ L+ + R EA+ N+M + GCTP+ F+ + + + + + A +
Sbjct: 181 TFAVLVRRYVRAGLAAEAVHAFNRMEEYGCTPDKVAFSIVISSLCKKRRASEAQLFFDSL 240
Query: 274 NQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFCGMGHW 453
+ +P+ + Y L+ + + ++ +M ++PNV TY ++I C G
Sbjct: 241 KH-RFEPDVIVYTSLVHGWCRAGNISKAEEVFSDMKVAGIKPNVYTYSIVIDSLCRSGQI 299
Query: 454 NRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVERGFAS 612
RA+ F EMI+ C P+ + +++ KAG+ +K ++ +M G A+
Sbjct: 300 TRAHDVFSEMIDAGC-DPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAA 351
>ref|XP_006342083.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Solanum tuberosum]
Length = 549
Score = 335 bits (859), Expect = 1e-89
Identities = 154/204 (75%), Positives = 184/204 (90%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRLSC D ITYNFLI++HCRD+N +EA+KV+N M KK
Sbjct: 343 LMRVHVKAGRTEKVLQVYNQMKRLSCSPDVITYNFLIDAHCRDENRDEALKVVNVMAKKR 402
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PNASTFNPIFRCI++ +DVNAAHR++AKM +L CKPNTVT N+LM+MF KS DMV+
Sbjct: 403 CEPNASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFVESKSTDMVI 462
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
KL+KEMDENEVEPNVNT+++LISM+CGMGHWN AY +F+EMIEEKCL+PS VY+MVL+Q
Sbjct: 463 KLRKEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEEKCLRPSESVYDMVLKQ 522
Query: 541 LRKAGQIKKHEELVEKMVERGFAS 612
LRKAGQ++KHEELVEKMV+RGFA+
Sbjct: 523 LRKAGQLRKHEELVEKMVDRGFAT 546
Score = 87.0 bits (214), Expect = 9e-15
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
+AG + ++F MK + TY+ +I++ CR A V ++M+ GC PNA
Sbjct: 279 RAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAI 338
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
TFN + R + +++ +M +L C P+ +TYN L+ ++ D LK+ M
Sbjct: 339 TFNNLMRVHVKAGRTEKVLQVYNQMKRLSCSPDVITYNFLIDAHCRDENRDEALKVVNVM 398
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ EPN +T+ + N A+ + +M E C KP+ ++++ ++
Sbjct: 399 AKKRCEPNASTFNPIFRCIAKARDVNAAHRLYAKMKELNC-KPNTVTCNILMKMFVESKS 457
Query: 559 ----IKKHEELVEKMVE 597
IK +E+ E VE
Sbjct: 458 TDMVIKLRKEMDENEVE 474
Score = 82.0 bits (201), Expect = 3e-13
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCP--------------------------------- 81
L+R +V+AG + + FN+M+ C
Sbjct: 204 LIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSIVIGILCKKRRAAEAQSFFDSLKDKF 263
Query: 82 -ADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
AD + Y L+ CR N+ EA ++ M G PN T++ + + A+
Sbjct: 264 EADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYD 323
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ ++M + C+PN +T+N LMR+ + VL++ +M P+V TY LI C
Sbjct: 324 VFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCSPDVITYNFLIDAHC 383
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVE 597
+ + A M +++C +P+ + + + + KA + L KM E
Sbjct: 384 RDENRDEALKVVNVMAKKRC-EPNASTFNPIFRCIAKARDVNAAHRLYAKMKE 435
Score = 65.1 bits (157), Expect = 4e-08
Identities = 42/178 (23%), Positives = 84/178 (47%)
Frame = +1
Query: 58 QMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQ 237
++K + P +T ++ LI + R EA+ N+M C P+ + F+ + + + +
Sbjct: 190 KLKNIKIPIET--FSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSIVIGILCKKR 247
Query: 238 DVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYR 417
A + K + + V Y L+ + + ++ ++M + V+PNV TY
Sbjct: 248 RAAEAQSFFDSLKD-KFEADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYS 306
Query: 418 VLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
++I C G RAY F EMI+ C +P+ + +++ KAG+ +K ++ +M
Sbjct: 307 IVIDALCRSGQTTRAYDVFSEMIDVGC-QPNAITFNNLMRVHVKAGRTEKVLQVYNQM 363
>ref|XP_004238390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Solanum lycopersicum]
Length = 543
Score = 333 bits (854), Expect = 5e-89
Identities = 153/204 (75%), Positives = 183/204 (89%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMKRLSC D ITYNFLI++ CRD+N +EA+KV+N M KKG
Sbjct: 337 LMRVHVKAGRTEKVLQVYNQMKRLSCDPDVITYNFLIDARCRDENRDEALKVVNVMAKKG 396
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C PNASTFNPIFRCI++ +DVNAAHR++AKM +L CKPNTVT N+LM+MFA KS DMV
Sbjct: 397 CEPNASTFNPIFRCIAKARDVNAAHRLYAKMKELNCKPNTVTCNILMKMFAESKSTDMVF 456
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
K+K EMDENEVEPNVNT+++LISM+CGMGHWN AY +F+EMIEE+CL+PS VY+MVL+Q
Sbjct: 457 KIKNEMDENEVEPNVNTFKILISMYCGMGHWNNAYKYFREMIEERCLRPSESVYDMVLKQ 516
Query: 541 LRKAGQIKKHEELVEKMVERGFAS 612
LRKAGQ++KHEELVEKMV+RGFA+
Sbjct: 517 LRKAGQLRKHEELVEKMVDRGFAT 540
Score = 83.2 bits (204), Expect = 1e-13
Identities = 45/178 (25%), Positives = 84/178 (47%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
+AG + ++F MK + TY+ +I++ CR A V ++M+ GC PNA
Sbjct: 273 RAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYDVFSEMIDVGCQPNAI 332
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
TFN + R + +++ +M +L C P+ +TYN L+ ++ D LK+ M
Sbjct: 333 TFNNLMRVHVKAGRTEKVLQVYNQMKRLSCDPDVITYNFLIDARCRDENRDEALKVVNVM 392
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKA 552
+ EPN +T+ + N A+ + +M E C KP+ ++++ ++
Sbjct: 393 AKKGCEPNASTFNPIFRCIAKARDVNAAHRLYAKMKELNC-KPNTVTCNILMKMFAES 449
Score = 80.5 bits (197), Expect = 8e-13
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCP--------------------------------- 81
L+R +V+AG + + FN+M+ C
Sbjct: 198 LIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSVVVGILCKKRRAAEAQSFFDSLKDKF 257
Query: 82 -ADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQDVNAAHR 258
AD + Y L+ CR N+ EA ++ M G PN T++ + + A+
Sbjct: 258 EADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYSIVIDALCRSGQTTRAYD 317
Query: 259 MHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRVLISMFC 438
+ ++M + C+PN +T+N LMR+ + VL++ +M +P+V TY LI C
Sbjct: 318 VFSEMIDVGCQPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLSCDPDVITYNFLIDARC 377
Query: 439 GMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVE 597
+ + A M ++ C +P+ + + + + KA + L KM E
Sbjct: 378 RDENRDEALKVVNVMAKKGC-EPNASTFNPIFRCIAKARDVNAAHRLYAKMKE 429
Score = 65.1 bits (157), Expect = 4e-08
Identities = 42/178 (23%), Positives = 84/178 (47%)
Frame = +1
Query: 58 QMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQ 237
++K + P +T ++ LI + R EA+ N+M C P+ + F+ + + + +
Sbjct: 184 KLKNIKIPIET--FSILIRRYVRAGLASEAVHTFNRMEDYDCKPDRNAFSVVVGILCKKR 241
Query: 238 DVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYR 417
A + K + + V Y L+ + + ++ ++M + V+PNV TY
Sbjct: 242 RAAEAQSFFDSLKD-KFEADVVLYTSLVHGWCRAGNISEAERIFRDMKDAGVQPNVYTYS 300
Query: 418 VLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKM 591
++I C G RAY F EMI+ C +P+ + +++ KAG+ +K ++ +M
Sbjct: 301 IVIDALCRSGQTTRAYDVFSEMIDVGC-QPNAITFNNLMRVHVKAGRTEKVLQVYNQM 357
>ref|XP_007136124.1| hypothetical protein PHAVU_009G019800g [Phaseolus vulgaris]
gi|561009211|gb|ESW08118.1| hypothetical protein
PHAVU_009G019800g [Phaseolus vulgaris]
Length = 530
Score = 331 bits (848), Expect = 3e-88
Identities = 156/208 (75%), Positives = 182/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV NQMKRL CPADTI+YNF+IESHCRD+NL+EA+K+LN MVKKG
Sbjct: 324 LMRVHVKAGRTEKVLQVHNQMKRLGCPADTISYNFIIESHCRDENLDEAVKILNLMVKKG 383
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
PNASTFN +F CI+++ DVN AHRM+A+M +LKC+PNT+TYN+LMRMFA KS DMVL
Sbjct: 384 VAPNASTFNCVFGCIAKLHDVNGAHRMYARMKELKCQPNTLTYNILMRMFAESKSTDMVL 443
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
K+KKEMDEN+VEPNVNTYR+LISMFC M HWN AY KEM+EEKCL+P+L VYE VL+
Sbjct: 444 KMKKEMDENQVEPNVNTYRILISMFCEMKHWNNAYKLVKEMVEEKCLRPNLSVYETVLEL 503
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR AGQ+KKHEELV+KMV RGF + RPL
Sbjct: 504 LRNAGQLKKHEELVDKMVARGFVT-RPL 530
Score = 91.3 bits (225), Expect = 5e-16
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
+AG K +VF+ MK + TY+ +I+S CR + A V +M+ GC PNA
Sbjct: 260 RAGNISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPNAV 319
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
TFN + R + ++H +M +L C +T++YN ++ ++ D +K+ M
Sbjct: 320 TFNSLMRVHVKAGRTEKVLQVHNQMKRLGCPADTISYNFIIESHCRDENLDEAVKILNLM 379
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ V PN +T+ + + N A+ + M E KC +P+ Y ++++ ++
Sbjct: 380 VKKGVAPNASTFNCVFGCIAKLHDVNGAHRMYARMKELKC-QPNTLTYNILMRMFAESKS 438
Query: 559 ----IKKHEELVEKMVE 597
+K +E+ E VE
Sbjct: 439 TDMVLKMKKEMDENQVE 455
Score = 68.6 bits (166), Expect = 3e-09
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Frame = +1
Query: 49 VFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCIS 228
V + MK T++ L+ + R EA+ N+M GCTP+ F+ + +
Sbjct: 166 VIDLMKTRGVEISVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDKVAFSIVISSLC 225
Query: 229 EIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVN 408
+ + N A + K +P+ + Y L+ + + ++ +M ++PNV
Sbjct: 226 KKRRANEAQSFFESLKH-KFEPDVLVYTSLVYGWCRAGNISKAEEVFSDMKMAGIKPNVY 284
Query: 409 TYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEK 588
TY ++I C G RA+ F EMI+ C P+ + +++ KAG+ +K ++ +
Sbjct: 285 TYSIVIDSLCRCGQITRAHDVFAEMIDSGC-DPNAVTFNSLMRVHVKAGRTEKVLQVHNQ 343
Query: 589 MVERG----FASPRPL*RESC*QSSDDTAIRD-SYKTSTGVAPWRIDTVNKMLCLIAK-- 747
M G S + C + D A++ + GVAP T N + IAK
Sbjct: 344 MKRLGCPADTISYNFIIESHCRDENLDEAVKILNLMVKKGVAP-NASTFNCVFGCIAKLH 402
Query: 748 ELQGLH 765
++ G H
Sbjct: 403 DVNGAH 408
Score = 68.2 bits (165), Expect = 4e-09
Identities = 45/193 (23%), Positives = 80/193 (41%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R + F +K P D + Y L+ CR N+ +A +V + M G PN
Sbjct: 226 KKRRANEAQSFFESLKHKFEP-DVLVYTSLVYGWCRAGNISKAEEVFSDMKMAGIKPNVY 284
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
T++ + + + AH + A+M C PN VT+N LMR+ + VL++ +M
Sbjct: 285 TYSIVIDSLCRCGQITRAHDVFAEMIDSGCDPNAVTFNSLMRVHVKAGRTEKVLQVHNQM 344
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ +Y +I C + + A M+ +K + P+ + V + K
Sbjct: 345 KRLGCPADTISYNFIIESHCRDENLDEAVKILNLMV-KKGVAPNASTFNCVFGCIAKLHD 403
Query: 559 IKKHEELVEKMVE 597
+ + +M E
Sbjct: 404 VNGAHRMYARMKE 416
>ref|XP_006306084.1| hypothetical protein CARUB_v10011494mg [Capsella rubella]
gi|482574795|gb|EOA38982.1| hypothetical protein
CARUB_v10011494mg [Capsella rubella]
Length = 532
Score = 330 bits (846), Expect = 5e-88
Identities = 155/208 (74%), Positives = 181/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMK+L C DTITYNFLIE+HCRD+NLE A+KVLN M+KK
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKN 385
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C NASTFN IFR I + +DVN AHRM++KM + KC+PNTVTYN+LMRMFAG KS DMVL
Sbjct: 386 CDVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVL 445
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
K+KKEM++ EVEPNVNTYR+L++MFCGMGHWN AY FKEM+EEKCL PSL +YEMVL Q
Sbjct: 446 KMKKEMEDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLSQ 505
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELVEKM+++G + RPL
Sbjct: 506 LRKAGQLKKHEELVEKMIQKGLVA-RPL 532
Score = 78.6 bits (192), Expect = 3e-12
Identities = 48/190 (25%), Positives = 82/190 (43%)
Frame = +1
Query: 28 RTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFN 207
R + F+ +K P D I Y L+ CR + EA +V +M G PN T++
Sbjct: 231 RATEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGEISEAERVFKEMKLAGIEPNVYTYS 289
Query: 208 PIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDEN 387
+ + ++ AH + A M C PN +T+N LMR+ + VL++ +M +
Sbjct: 290 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 349
Query: 388 EVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKK 567
EP+ TY LI C + A MI++ C + + + + + K +
Sbjct: 350 GCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKNC-DVNASTFNTIFRYIEKKRDVNG 408
Query: 568 HEELVEKMVE 597
+ KM+E
Sbjct: 409 AHRMYSKMME 418
Score = 68.9 bits (167), Expect = 2e-09
Identities = 44/181 (24%), Positives = 83/181 (45%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + T+ LI+ + R EA+ N+M GC P+ F+ + +S +
Sbjct: 172 MKSRNVEISIETFTILIKRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISILSRKRR 231
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
A + + +P+ + Y L+R + ++ KEM +EPNV TY +
Sbjct: 232 ATEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAERVFKEMKLAGIEPNVYTYSI 290
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVER 600
+I C G +RA+ F +M++ C P+ + +++ KAG+ +K ++ +M +
Sbjct: 291 VIDALCRCGQISRAHDVFADMLDSGC-APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 349
Query: 601 G 603
G
Sbjct: 350 G 350
>ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity
to a hypothetical protein T3P18.15 gi|5454201 from
Arabidopsis thaliana BAC T3P18 gb|AC005698 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8
[Arabidopsis thaliana] gi|15450347|gb|AAK96467.1|
At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 328 bits (840), Expect = 2e-87
Identities = 154/208 (74%), Positives = 180/208 (86%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVLQV+NQMK+L C DTITYNFLIE+HCRD+NLE A+KVLN M+KK
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C NASTFN IFR I + +DVN AHRM++KM + KC+PNTVTYN+LMRMF G KS DMVL
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVL 450
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
K+KKEMD+ EVEPNVNTYR+L++MFCGMGHWN AY FKEM+EEKCL PSL +YEMVL Q
Sbjct: 451 KMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR+AGQ+KKHEELVEKM+++G + RPL
Sbjct: 511 LRRAGQLKKHEELVEKMIQKGLVA-RPL 537
Score = 82.8 bits (203), Expect = 2e-13
Identities = 50/190 (26%), Positives = 84/190 (44%)
Frame = +1
Query: 28 RTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFN 207
R + F+ +K P D I Y L+ CR + EA KV +M G PN T++
Sbjct: 236 RASEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYS 294
Query: 208 PIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDEN 387
+ + ++ AH + A M C PN +T+N LMR+ + VL++ +M +
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 388 EVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKK 567
EP+ TY LI C + A MI++KC + + + + + + K +
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKRDVNG 413
Query: 568 HEELVEKMVE 597
+ KM+E
Sbjct: 414 AHRMYSKMME 423
Score = 69.3 bits (168), Expect = 2e-09
Identities = 45/181 (24%), Positives = 83/181 (45%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + T+ LI + R EA+ N+M GC P+ F+ + +S +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
+ A + + +P+ + Y L+R + K+ KEM +EPNV TY +
Sbjct: 237 ASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVER 600
+I C G +RA+ F +M++ C P+ + +++ KAG+ +K ++ +M +
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGC-APNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 601 G 603
G
Sbjct: 355 G 355
>ref|XP_006581146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like isoform X1 [Glycine max]
gi|571458531|ref|XP_006581147.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like isoform X2 [Glycine max]
Length = 564
Score = 326 bits (835), Expect = 9e-87
Identities = 154/208 (74%), Positives = 181/208 (87%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGRTEKVL+V+NQMKRL CPADTI+YNF+IESHCRD+NLEEA K+LN MVKKG
Sbjct: 358 LMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKG 417
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
PNASTFN IF CI+++ DVN AHRM+A+M +L C+PNT+TYN+LMRMFA +S DMVL
Sbjct: 418 VAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVL 477
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
K+KKEMDE++VEPNVNTYR+LISMFC M HWN AY EM+EEKCL+P+L VYE VL+
Sbjct: 478 KMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLEL 537
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LRKAGQ+KKHEELV+KMV RGF + RPL
Sbjct: 538 LRKAGQLKKHEELVDKMVARGFVT-RPL 564
Score = 85.5 bits (210), Expect = 3e-14
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
+AG K +VF+ MK + TY+ +I+S CR + A V ++M+ GC PNA
Sbjct: 294 RAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAV 353
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
TFN + R + +++ +M +L C +T++YN ++ ++ + K+ M
Sbjct: 354 TFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLM 413
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ V PN +T+ + + N A+ + M E C +P+ Y ++++ ++
Sbjct: 414 VKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNC-QPNTLTYNILMRMFAESRS 472
Query: 559 ----IKKHEELVEKMVE 597
+K +E+ E VE
Sbjct: 473 TDMVLKMKKEMDESQVE 489
Score = 67.4 bits (163), Expect = 7e-09
Identities = 44/185 (23%), Positives = 82/185 (44%)
Frame = +1
Query: 49 VFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCIS 228
V + MK T++ L+ + R EA+ N+M GCTP+ F+ + +
Sbjct: 200 VIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLC 259
Query: 229 EIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVN 408
+ + N A + + +P+ V Y L+ + ++ +M ++PNV
Sbjct: 260 KKRRANEAQSFFDSLKH-RFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVY 318
Query: 409 TYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEK 588
TY ++I C G RA+ F EMI+ C P+ + +++ KAG+ +K ++ +
Sbjct: 319 TYSIVIDSLCRCGQITRAHDVFSEMIDAGC-DPNAVTFNSLMRVHVKAGRTEKVLKVYNQ 377
Query: 589 MVERG 603
M G
Sbjct: 378 MKRLG 382
Score = 67.4 bits (163), Expect = 7e-09
Identities = 43/193 (22%), Positives = 80/193 (41%)
Frame = +1
Query: 19 KAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNAS 198
K R + F+ +K P D + Y L+ CR ++ +A +V + M G PN
Sbjct: 260 KKRRANEAQSFFDSLKHRFEP-DVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVY 318
Query: 199 TFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEM 378
T++ + + + AH + ++M C PN VT+N LMR+ + VLK+ +M
Sbjct: 319 TYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQM 378
Query: 379 DENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQ 558
+ +Y +I C + A M+ +K + P+ + + + K
Sbjct: 379 KRLGCPADTISYNFIIESHCRDENLEEAAKILNLMV-KKGVAPNASTFNFIFGCIAKLHD 437
Query: 559 IKKHEELVEKMVE 597
+ + +M E
Sbjct: 438 VNGAHRMYARMKE 450
>ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297336219|gb|EFH66636.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 537
Score = 326 bits (835), Expect = 9e-87
Identities = 153/208 (73%), Positives = 180/208 (86%)
Frame = +1
Query: 1 LMRVHVKAGRTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKG 180
LMRVHVKAGR EKVLQV+NQMK+L C DTITYNFLIE+HCRD+NLE A+KVLN M+KK
Sbjct: 331 LMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKK 390
Query: 181 CTPNASTFNPIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVL 360
C NASTFN IFR I + +DVN AHRM++KM + KC+PNTVTYN+LMRMFAG KS DMVL
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVL 450
Query: 361 KLKKEMDENEVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQ 540
K+KK+MD+ EVEPNVNTYR+L++MFCGMGHWN AY FKEM+EEKCL PSL +YEMVL Q
Sbjct: 451 KMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQ 510
Query: 541 LRKAGQIKKHEELVEKMVERGFASPRPL 624
LR+AGQ+KKHEELVEKM+++G + RPL
Sbjct: 511 LRRAGQLKKHEELVEKMIQKGLVT-RPL 537
Score = 81.6 bits (200), Expect = 4e-13
Identities = 50/190 (26%), Positives = 83/190 (43%)
Frame = +1
Query: 28 RTEKVLQVFNQMKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFN 207
R + F+ +K P D I Y L+ CR + EA KV M G PN T++
Sbjct: 236 RASEAQSFFDSLKDRFEP-DVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYS 294
Query: 208 PIFRCISEIQDVNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDEN 387
+ + ++ AH + A M C PN +T+N LMR+ + VL++ +M +
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKL 354
Query: 388 EVEPNVNTYRVLISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKK 567
EP+ TY LI C + A MI++KC + + + + + + K +
Sbjct: 355 GCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKRDVNG 413
Query: 568 HEELVEKMVE 597
+ KM+E
Sbjct: 414 AHRMYSKMME 423
Score = 67.4 bits (163), Expect = 7e-09
Identities = 44/181 (24%), Positives = 83/181 (45%)
Frame = +1
Query: 61 MKRLSCPADTITYNFLIESHCRDDNLEEAIKVLNQMVKKGCTPNASTFNPIFRCISEIQD 240
MK + T+ LI + R EA+ N+M GC P+ F+ + +S +
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRR 236
Query: 241 VNAAHRMHAKMNQLKCKPNTVTYNVLMRMFAGKKSADMVLKLKKEMDENEVEPNVNTYRV 420
+ A + + +P+ + Y L+R + K+ K+M +EPNV TY +
Sbjct: 237 ASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSI 295
Query: 421 LISMFCGMGHWNRAYSFFKEMIEEKCLKPSLPVYEMVLQQLRKAGQIKKHEELVEKMVER 600
+I C G +RA+ F +M++ C P+ + +++ KAG+ +K ++ +M +
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGC-APNAITFNNLMRVHVKAGRPEKVLQVYNQMKKL 354
Query: 601 G 603
G
Sbjct: 355 G 355