BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00006427
         (2050 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec...  1115   0.0  
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]  1115   0.0  
ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation spec...  1105   0.0  
ref|XP_007042279.1| Cleavage and polyadenylation specificity fac...  1096   0.0  
ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation spec...  1094   0.0  
ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citr...  1091   0.0  
ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Popu...  1082   0.0  
ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation spec...  1079   0.0  
ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citr...  1078   0.0  
ref|XP_002323824.2| cleavage and polyadenylation specificity fac...  1074   0.0  
gb|EXC33626.1| Cleavage and polyadenylation specificity factor s...  1073   0.0  
gb|EYU26513.1| hypothetical protein MIMGU_mgv1a002259mg [Mimulus...  1064   0.0  
ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation spec...  1061   0.0  
ref|XP_006300311.1| hypothetical protein CARUB_v10019868mg [Caps...  1059   0.0  
ref|NP_176297.1| cleavage and polyadenylation specificity factor...  1057   0.0  
gb|AAL66977.1| putative cleavage and polyadenylation specificity...  1055   0.0  
ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arab...  1054   0.0  
ref|XP_003540154.1| PREDICTED: cleavage and polyadenylation spec...  1048   0.0  
ref|XP_007148539.1| hypothetical protein PHAVU_006G217100g [Phas...  1047   0.0  
ref|XP_006357977.1| PREDICTED: cleavage and polyadenylation spec...  1045   0.0  

>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Vitis vinifera]
          Length = 694

 Score = 1115 bits (2883), Expect = 0.0
 Identities = 558/651 (85%), Positives = 589/651 (90%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KT+LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG
Sbjct: 44   YKGKTILFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMD+IEVIDFHQTLEVNGIRF
Sbjct: 104  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQL 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR VREKRFTDVIHSTISQGGRVLIP FALGRAQELLLILDEYWSNHPE HNIPIYYA
Sbjct: 224  HQPRHVREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAKRCMAVYQTYIN+MN+RIRNQFANSNPFDFKHISPLKSIENF DVGPSVVMASP G
Sbjct: 284  SPLAKRCMAVYQTYINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKNAC++PGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 344  LQSGLSRQLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD+AQTSTFL+ELMPPNIILVHGEANEMGRLKQKLIT FAD NTKII+PKNCQSV
Sbjct: 404  SFSAHADFAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEKTP VGETVSGLLVKKGFTYQIM PDDL +FSQLSTA+VTQR
Sbjct: 464  EMYFNSEKMAKTIGRLAEKTPGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PY+GAFGVIKHRLKQIY                 VHERVT+K ESEKH+S+ WTSDP
Sbjct: 524  ITIPYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDP 583

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNISRE+P                       H+LLVSLFGDVK+   
Sbjct: 584  ISDMVSDSIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGEN 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            G LVI+VDGNVA+LD QSG+VESENE L+ERVR AF+RIQ+A+KPIPLS S
Sbjct: 644  GNLVISVDGNVAHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 694


>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
          Length = 687

 Score = 1115 bits (2883), Expect = 0.0
 Identities = 558/651 (85%), Positives = 589/651 (90%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KT+LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG
Sbjct: 37   YKGKTILFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 96

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMD+IEVIDFHQTLEVNGIRF
Sbjct: 97   RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRF 156

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 157  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFSPDICIIESTYGVQL 216

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR VREKRFTDVIHSTISQGGRVLIP FALGRAQELLLILDEYWSNHPE HNIPIYYA
Sbjct: 217  HQPRHVREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPIYYA 276

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAKRCMAVYQTYIN+MN+RIRNQFANSNPFDFKHISPLKSIENF DVGPSVVMASP G
Sbjct: 277  SPLAKRCMAVYQTYINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPSG 336

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKNAC++PGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 337  LQSGLSRQLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 396

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD+AQTSTFL+ELMPPNIILVHGEANEMGRLKQKLIT FAD NTKII+PKNCQSV
Sbjct: 397  SFSAHADFAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADRNTKIISPKNCQSV 456

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEKTP VGETVSGLLVKKGFTYQIM PDDL +FSQLSTA+VTQR
Sbjct: 457  EMYFNSEKMAKTIGRLAEKTPGVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQR 516

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PY+GAFGVIKHRLKQIY                 VHERVT+K ESEKH+S+ WTSDP
Sbjct: 517  ITIPYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHESEKHISLHWTSDP 576

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNISRE+P                       H+LLVSLFGDVK+   
Sbjct: 577  ISDMVSDSIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGEN 636

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            G LVI+VDGNVA+LD QSG+VESENE L+ERVR AF+RIQ+A+KPIPLS S
Sbjct: 637  GNLVISVDGNVAHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 687


>ref|XP_002271646.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Vitis vinifera]
          Length = 693

 Score = 1105 bits (2859), Expect = 0.0
 Identities = 552/651 (84%), Positives = 586/651 (90%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KT+LFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG
Sbjct: 43   YKGKTILFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 102

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMD+IEVIDFHQTLEVNGIRF
Sbjct: 103  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGIRF 162

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQF PDICIIESTYGVQL
Sbjct: 163  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEIPQFCPDICIIESTYGVQL 222

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR VREKRFTDVIHSTISQGGRVLIP +ALGRAQELLLILDEYWSNHPE HN+PIYYA
Sbjct: 223  HQPRHVREKRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYA 282

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAKRCMAVYQTYIN+MN+RIRNQFANSNPFDFKHISPLKSIENF DVGPSVVMASPGG
Sbjct: 283  SPLAKRCMAVYQTYINSMNERIRNQFANSNPFDFKHISPLKSIENFNDVGPSVVMASPGG 342

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKNAC++PGYVV GTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 343  LQSGLSRQLFDMWCSDKKNACVIPGYVVGGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 402

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD+AQTSTFL+ELMPPNIILVHGEANEMGRLKQKLIT FAD NTKII+PKNCQSV
Sbjct: 403  SFSAHADFAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITQFADCNTKIISPKNCQSV 462

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIM PDDL +F QLSTA+VTQR
Sbjct: 463  EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFWQLSTANVTQR 522

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PY+GAFGVIKHRLKQIY                 VHERVT+K +SEKH+S+ WTSDP
Sbjct: 523  ITIPYTGAFGVIKHRLKQIYESVESLPDEESEVPAFRVHERVTVKHDSEKHISLHWTSDP 582

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNIS E+P                       H+LLVSLFGDVK+ G 
Sbjct: 583  ISDMVSDSIVALVLNISLEIPKVIVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLEGN 642

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            G LVI+VDGNV +LD QSG+VESENE L+ERVR AF+RIQ+A+KPIP S S
Sbjct: 643  GNLVISVDGNVVHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPPSVS 693


>ref|XP_007042279.1| Cleavage and polyadenylation specificity factor 73-I [Theobroma
            cacao] gi|508706214|gb|EOX98110.1| Cleavage and
            polyadenylation specificity factor 73-I [Theobroma cacao]
          Length = 694

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 543/651 (83%), Positives = 589/651 (90%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK+KTVLFDCGIHP YSGMAALPYFDEIDPSTID LL+THFHLDHAASLPYFLEKTTF+G
Sbjct: 44   YKSKTVLFDCGIHPGYSGMAALPYFDEIDPSTIDALLITHFHLDHAASLPYFLEKTTFRG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKL+L+DYVKVSKVSVEDML+DEQDI RSMD+IEVIDFHQT+EVNGI+F
Sbjct: 104  RVFMTHATKAIYKLILTDYVKVSKVSVEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIKF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REKRFTD +HSTISQGGRVLIP FALGR+QELLLILDEYWSNHPE HNIPIYYA
Sbjct: 224  HQPRHIREKRFTDAVHSTISQGGRVLIPAFALGRSQELLLILDEYWSNHPELHNIPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MN+RIRNQFANSNPF FKHISPL SIE+F DVGPSVVMASPGG
Sbjct: 284  SPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDK+NACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPL MQVHYI
Sbjct: 344  LQSGLSRQLFDMWCSDKRNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLCMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEMGRLKQKLIT   DGNTKIITPKNCQSV
Sbjct: 404  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITELTDGNTKIITPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEKTPEVGETVSG+LVKKGFTYQIM PDD+ IFSQLSTA++TQR
Sbjct: 464  EMYFNSEKMAKTIGRLAEKTPEVGETVSGVLVKKGFTYQIMAPDDIHIFSQLSTANITQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P++GAFGVIKHRL+QIY              TL VH+RVT+KQ+S+KH+S+ WTSDP
Sbjct: 524  ITIPFAGAFGVIKHRLEQIYESVESSTDEESGVPTLRVHDRVTVKQDSDKHISLHWTSDP 583

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNISRE+P                       H+LLVSLFGDVK+   
Sbjct: 584  ISDMVSDSIVALVLNISREIPKVVVESEAVKMEEENGKKAEKVIHALLVSLFGDVKLGEN 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GKL+I+VDGNVA+LD QSGDVESENE L+ERV+TAFRRIQSA+KPIPLSAS
Sbjct: 644  GKLMISVDGNVAHLDKQSGDVESENEGLKERVKTAFRRIQSAVKPIPLSAS 694


>ref|XP_006471216.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like isoform X1 [Citrus sinensis]
          Length = 694

 Score = 1094 bits (2829), Expect = 0.0
 Identities = 544/650 (83%), Positives = 589/650 (90%), Gaps = 2/650 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KT+LFDCGIHPAYSGMAALPYFDEIDPS IDVLL+THFHLDHAASLPYFLEKTTFKG
Sbjct: 44   YKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI RSMD+IEV+DFHQT+EVNGI+F
Sbjct: 104  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REKRFTDVIHSTISQGGRVLIP FALGRAQELLLILDEYWSNHPEFHNIPIYYA
Sbjct: 224  HQPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MN+RIRNQFANSNPF FKHISPL SI++F DVGPSVVMASPGG
Sbjct: 284  SPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD+WCSDKKNAC++PGYVVEGTLAKTII+EPKEVTLMNGLTAPLNMQVHYI
Sbjct: 344  LQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGE++EMGRLK KL+T  AD NTKIITPKNCQSV
Sbjct: 404  SFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEKTPEVGETVSG+LVKKGFTYQIM PDDL IFSQLSTA++TQR
Sbjct: 464  EMYFNSEKMAKTIGRLAEKTPEVGETVSGILVKKGFTYQIMAPDDLHIFSQLSTANITQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I+VPYSGAFGVIK+RL+QIY              TL VH+RVT+KQ+SEKH+S+ WTSDP
Sbjct: 524  ITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDP 583

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDSVVA++LNI+RE+P                       H+LLVSLFGDVK+ G 
Sbjct: 584  ISDMVSDSVVALVLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGGN 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSA 1945
            GK+VINVDGNVA+LD QSGDVESENE L+ERV+TAF RIQ A+KPIPLSA
Sbjct: 644  GKVVINVDGNVAHLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLSA 693


>ref|XP_006431752.1| hypothetical protein CICLE_v10000468mg [Citrus clementina]
            gi|557533874|gb|ESR44992.1| hypothetical protein
            CICLE_v10000468mg [Citrus clementina]
          Length = 694

 Score = 1091 bits (2822), Expect = 0.0
 Identities = 543/650 (83%), Positives = 588/650 (90%), Gaps = 2/650 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KT+LFDCGIHPAYSGMAALPYFDEIDPS IDVLL+THFHLDHAASLPYFLEKTTFKG
Sbjct: 44   YKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFKG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI RSMD+IEV+DFHQT+EVNGI+F
Sbjct: 104  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDKIEVLDFHQTVEVNGIKF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REKRFTDVIHSTISQGGRVLIP FALGRAQELLLILDEYWSNHPEFHNIPIYYA
Sbjct: 224  HQPRNIREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWSNHPEFHNIPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MN+RIRNQFANSNPF FKHISPL SI++F DVGPSVVMASPGG
Sbjct: 284  SPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDFSDVGPSVVMASPGG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD+WCSDKKNAC++PGYVVEGTLAKTII+EPKEVTLMNGLTAPLNMQVHYI
Sbjct: 344  LQSGLSRQLFDIWCSDKKNACVIPGYVVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGE++EMGRLK KL+T  AD NTKIITPKNCQSV
Sbjct: 404  SFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEKTPEVGETVSG+LVKKGFTYQIM PDDL IFSQLSTA++TQR
Sbjct: 464  EMYFNSEKMAKTIGRLAEKTPEVGETVSGILVKKGFTYQIMAPDDLHIFSQLSTANITQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I+VPYSGAFGVIK+RL+QIY              TL VH+RVT+KQ+SEKH+S+ WTSDP
Sbjct: 524  ITVPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDP 583

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDSVVA++LNI+RE+P                       H+LLVSLFGDVK+   
Sbjct: 584  ISDMVSDSVVALVLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDN 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSA 1945
            GK+VINVDGNVA+LD QSGDVESENE L+ERV+TAF RIQ A+KPIPLSA
Sbjct: 644  GKVVINVDGNVAHLDKQSGDVESENEGLKERVKTAFMRIQRAVKPIPLSA 693


>ref|XP_002323823.2| hypothetical protein POPTR_0017s11240g [Populus trichocarpa]
            gi|566212712|ref|XP_002323825.2| hypothetical protein
            POPTR_0017s11240g [Populus trichocarpa]
            gi|550320032|gb|EEF03956.2| hypothetical protein
            POPTR_0017s11240g [Populus trichocarpa]
            gi|550320033|gb|EEF03958.2| hypothetical protein
            POPTR_0017s11240g [Populus trichocarpa]
          Length = 699

 Score = 1082 bits (2798), Expect = 0.0
 Identities = 537/648 (82%), Positives = 583/648 (89%), Gaps = 2/648 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            +K KTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTF+G
Sbjct: 45   FKGKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRG 104

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DE+DI RSMD+IEVIDFHQTL+VNGI+F
Sbjct: 105  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTLDVNGIKF 164

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 165  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQL 224

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REKRFTDVIHSTIS GGRVLIP FALGRAQELLLILDEYW+NHPE HNIPIYYA
Sbjct: 225  HQPRHLREKRFTDVIHSTISLGGRVLIPAFALGRAQELLLILDEYWANHPELHNIPIYYA 284

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CM VYQTYI +MN+RIRNQFANSNPF FKHISPL SIE+F DVGPSVVMASPGG
Sbjct: 285  SPLAKKCMTVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIEDFSDVGPSVVMASPGG 344

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKNAC+LPGYVVEGTLAKTIINEPKEV LMNGLTAPLNMQVHYI
Sbjct: 345  LQSGLSRQLFDMWCSDKKNACVLPGYVVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYI 404

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEMGRLKQKLIT FADGNTKIITPKNCQSV
Sbjct: 405  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITEFADGNTKIITPKNCQSV 464

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIG+LAE+TP+VGETVSG+LVKKGFTYQIM P DL +FSQLST ++TQR
Sbjct: 465  EMYFNSEKMAKTIGKLAERTPDVGETVSGILVKKGFTYQIMAPGDLHVFSQLSTGNITQR 524

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P+SGAFGVIKHRL+QIY              TL VHE VT+KQES++H+S+ WT+DP
Sbjct: 525  ITIPFSGAFGVIKHRLEQIYESVESGTDEESGFPTLQVHELVTVKQESDRHISLHWTADP 584

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNISRE+P                       ++LLVSLFGDVK+   
Sbjct: 585  ISDMVSDSIVALVLNISREVPKVIVESEDIKSEEENEKKAEKVIYALLVSLFGDVKLGEN 644

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPL 1939
            GKLV+ VDGNVA LD QSGDVESENE L+ERVRTAFRRI+SA++PIPL
Sbjct: 645  GKLVLRVDGNVAELDKQSGDVESENEGLKERVRTAFRRIRSAVRPIPL 692


>ref|XP_006471214.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like isoform X1 [Citrus sinensis]
          Length = 694

 Score = 1079 bits (2791), Expect = 0.0
 Identities = 534/651 (82%), Positives = 586/651 (90%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KT+LFDCGIHPAYSGMAALPYFDEIDPS IDVLL+THFHLDHAASLPYFLEKTTF G
Sbjct: 44   YKGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI RSMDRIEV+DFHQT+EVNGI+F
Sbjct: 104  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +RE+RFTDVIHSTISQGGRVLIP +ALGRAQELLLILDEYWSNHPEFHNIPIYYA
Sbjct: 224  HQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MN+RIRNQFANSNPF FKHISPL SI++  DVGPSVVMASPGG
Sbjct: 284  SPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDLSDVGPSVVMASPGG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD+WCSDKKNAC++PGY+VEGTLAKTII+EPKEVTLMNGLTAPLNMQVHYI
Sbjct: 344  LQSGLSRQLFDIWCSDKKNACVIPGYIVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGE++EMGRLK KL+T  AD NTKIITPKNCQSV
Sbjct: 404  SFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEK PEVGETVSG+LVK GFTYQIM PDDL IFSQLSTA++TQR
Sbjct: 464  EMYFNSEKMAKTIGRLAEKMPEVGETVSGILVKTGFTYQIMAPDDLHIFSQLSTANITQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYSGAFGV+K+RL+QIY              TL VH+RVT+KQ+SEKH+S+ WTSDP
Sbjct: 524  ITIPYSGAFGVMKYRLEQIYESVESSTDEESGVPTLQVHDRVTLKQDSEKHISMCWTSDP 583

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDSVVA++LNI++E+P                       H+LLVSLFGDV++   
Sbjct: 584  ISDMVSDSVVALVLNINQEVPKLVVESEAIKSEEESGKKAEKVIHALLVSLFGDVQLGEN 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GKLVINVDGNVA+LD QSGDVESENE L+E+V+ AF+RIQSA+KPIPLSAS
Sbjct: 644  GKLVINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLSAS 694


>ref|XP_006431751.1| hypothetical protein CICLE_v10000467mg [Citrus clementina]
            gi|557533873|gb|ESR44991.1| hypothetical protein
            CICLE_v10000467mg [Citrus clementina]
          Length = 694

 Score = 1078 bits (2788), Expect = 0.0
 Identities = 533/651 (81%), Positives = 585/651 (89%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            Y+ KT+LFDCGIHPAYSGMAALPYFDEIDPS IDVLL+THFHLDHAASLPYFLEKTTF G
Sbjct: 44   YRGKTILFDCGIHPAYSGMAALPYFDEIDPSAIDVLLITHFHLDHAASLPYFLEKTTFSG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI RSMDRIEV+DFHQT+EVNGI+F
Sbjct: 104  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINRSMDRIEVLDFHQTVEVNGIKF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQL 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +RE+RFTDVIHSTISQGGRVLIP +ALGRAQELLLILDEYWSNHPEFHNIPIYYA
Sbjct: 224  HQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MN+RIRNQFANSNPF FKHISPL SI++  DVGPSVVMASPGG
Sbjct: 284  SPLAKKCMAVYQTYILSMNERIRNQFANSNPFKFKHISPLNSIDDLSDVGPSVVMASPGG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD+WCSDKKNAC++PGY+VEGTLAKTII+EPKEVTLMNGLTAPLNMQVHYI
Sbjct: 344  LQSGLSRQLFDIWCSDKKNACVIPGYLVEGTLAKTIISEPKEVTLMNGLTAPLNMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGE++EMGRLK KL+T  AD NTKIITPKNCQSV
Sbjct: 404  SFSAHADYAQTSTFLKELMPPNIILVHGESHEMGRLKTKLMTELADCNTKIITPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKTIGRLAEK PEVGETVSG+LVK GFTYQIM PDDL IFSQLST ++TQR
Sbjct: 464  EMYFNSEKMAKTIGRLAEKMPEVGETVSGILVKTGFTYQIMAPDDLHIFSQLSTTNITQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYSGAFGVIK+RL+QIY              TL VH+RVT+KQ+SEKH+S+ WTSDP
Sbjct: 524  ITIPYSGAFGVIKYRLEQIYESVESSTDEESGVPTLRVHDRVTLKQDSEKHISMHWTSDP 583

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNI+RE+P                       H+LLVSLFGDVK+   
Sbjct: 584  ISDMVSDSIVALVLNINREVPKVVVESEAIKSEEESGKKAEKVIHALLVSLFGDVKLGDN 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GKLVINVDGNVA+LD QSGDVESENE L+E+V+ AF+RIQSA+KPIPL+AS
Sbjct: 644  GKLVINVDGNVAHLDKQSGDVESENEGLKEKVKAAFKRIQSAVKPIPLAAS 694


>ref|XP_002323824.2| cleavage and polyadenylation specificity factor family protein
            [Populus trichocarpa] gi|550320034|gb|EEF03957.2|
            cleavage and polyadenylation specificity factor family
            protein [Populus trichocarpa]
          Length = 695

 Score = 1074 bits (2778), Expect = 0.0
 Identities = 531/651 (81%), Positives = 583/651 (89%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            +K KTVLFDCGIH AYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTF+G
Sbjct: 45   FKGKTVLFDCGIHLAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFRG 104

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DE+DI RSMD+IEVIDFHQT++VNGI+F
Sbjct: 105  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEKDINRSMDKIEVIDFHQTVDVNGIKF 164

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPDICIIESTYGVQL
Sbjct: 165  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAEMPQFSPDICIIESTYGVQL 224

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REKRFTDVIHSTIS GGRVLIP FALGRAQELLLILDEYWSNHPE HNIP+YYA
Sbjct: 225  HQPRHIREKRFTDVIHSTISLGGRVLIPAFALGRAQELLLILDEYWSNHPELHNIPVYYA 284

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CM VYQTYI +MN+RIRNQFA+SNPF FKHISPL SIE+F DVGPSVVMA+PGG
Sbjct: 285  SPLAKKCMTVYQTYILSMNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGG 344

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKNAC++PG++VEGTLAKTIINEPKEV LMNGLTAPLNMQVHYI
Sbjct: 345  LQSGLSRQLFDMWCSDKKNACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYI 404

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEMGRLKQKLIT F DGNTKIITPKNCQSV
Sbjct: 405  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMGRLKQKLITEFTDGNTKIITPKNCQSV 464

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEKMAKT G+LAE+TP+VGETVSG+LVKKGFTYQIM P+DL +FSQLST ++TQR
Sbjct: 465  EMYFNSEKMAKTTGKLAERTPDVGETVSGILVKKGFTYQIMAPEDLHVFSQLSTGNITQR 524

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P+SGAFGVIKHRL+QIY              TL VHE VT+KQES++H+S+ WT+DP
Sbjct: 525  ITIPFSGAFGVIKHRLEQIYESVESGTDEESGSPTLQVHELVTVKQESDRHISLHWTADP 584

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDS+VA++LNISRE+P                       ++ LVSLFGDVK+   
Sbjct: 585  ISDMVSDSIVALVLNISREVPKVIVESEDIKSEEENEKKAEKVIYAFLVSLFGDVKLGEN 644

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GKLVI+VDGNVA LD QSGDVESENE L+ERVRTAFRRIQSA++PIPL AS
Sbjct: 645  GKLVISVDGNVAELDKQSGDVESENEGLKERVRTAFRRIQSAVRPIPLPAS 695


>gb|EXC33626.1| Cleavage and polyadenylation specificity factor subunit 3-I [Morus
            notabilis]
          Length = 693

 Score = 1073 bits (2775), Expect = 0.0
 Identities = 534/651 (82%), Positives = 584/651 (89%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            +K+KTVLFDCGIHPAYSGMAALPYFDEIDPST+DVLL+THFHLDHAASLPYFLEKTTFKG
Sbjct: 45   FKSKTVLFDCGIHPAYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKG 104

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMT+ATKAIYKLLL+DYVKVSKVSVEDMLYDEQDI RSMD+IEVIDFHQT+EVNGIRF
Sbjct: 105  RVFMTYATKAIYKLLLTDYVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRF 164

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSR+EDRHLRAAETPQFSPD+CIIESTYGVQ 
Sbjct: 165  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRDEDRHLRAAETPQFSPDVCIIESTYGVQH 224

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPE  NIPIYYA
Sbjct: 225  HQPRNIREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPELQNIPIYYA 284

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAKRC++VY+TY  +MNDRIRN  A SNPF FKHISPLKSIENF+DVGPSVVMASPGG
Sbjct: 285  SPLAKRCLSVYETYTLSMNDRIRN--AKSNPFIFKHISPLKSIENFKDVGPSVVMASPGG 342

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDK+NAC++PGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 343  LQSGLSRQLFDMWCSDKRNACVIPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 402

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD AQTS FL+EL PPNIILVHGEANEMGRLKQKL+T FAD NTKI+TPKNCQSV
Sbjct: 403  SFSAHADSAQTSAFLEELRPPNIILVHGEANEMGRLKQKLMTQFADRNTKILTPKNCQSV 462

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNS+KMAK IG+LAEKTPEVG+ VSGLLVKKGF+YQIM PDDL +FSQL+TA++TQR
Sbjct: 463  EMYFNSQKMAKAIGKLAEKTPEVGDIVSGLLVKKGFSYQIMAPDDLHVFSQLATANITQR 522

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYS AF VIKHRLKQIY              TL VH+RVT+K ES+KH+S+ WTSDP
Sbjct: 523  ITIPYSSAFSVIKHRLKQIYDSVESSTDEESGVPTLRVHDRVTVKHESDKHISLHWTSDP 582

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDSVVA++LNI+RE+P                       ++LLVSLFGDVK+ G 
Sbjct: 583  ISDMVSDSVVALVLNINREVPKVVVESEDTKTEEDNEKKAEKVIYALLVSLFGDVKLRGN 642

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GK++INVDGNVA LD QSGDVESENE L+ERVRTAFRRIQSA+KPIPLS+S
Sbjct: 643  GKIMINVDGNVAQLDKQSGDVESENEGLKERVRTAFRRIQSAVKPIPLSSS 693


>gb|EYU26513.1| hypothetical protein MIMGU_mgv1a002259mg [Mimulus guttatus]
          Length = 694

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 528/651 (81%), Positives = 573/651 (88%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KTV+FDCGIHPA+SGMAALPYFDEIDPS IDVLLVTHFHLDHAASLPYFLEKTTF+G
Sbjct: 44   YKGKTVMFDCGIHPAFSGMAALPYFDEIDPSAIDVLLVTHFHLDHAASLPYFLEKTTFRG 103

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMD+IEVIDFHQTLEVNG+RF
Sbjct: 104  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDKIEVIDFHQTLEVNGVRF 163

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAE PQFSPD+CIIESTYGVQ 
Sbjct: 164  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDVCIIESTYGVQT 223

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR +REK FTDVIHST+SQGGRVLIP +ALGRAQELLLILDEYWSNHPE HN+PIYYA
Sbjct: 224  HQPRHIREKLFTDVIHSTVSQGGRVLIPAYALGRAQELLLILDEYWSNHPELHNVPIYYA 283

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAKRCMAVYQTYIN+MNDRIRNQFANSNPFDFKHISPLKSI+ F DVGP+VVMASPGG
Sbjct: 284  SPLAKRCMAVYQTYINSMNDRIRNQFANSNPFDFKHISPLKSIDEFRDVGPAVVMASPGG 343

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD WCSDKKNAC++PGYVVEGT+AKTIINEPKEVTL +GLTAPLNMQVHYI
Sbjct: 344  LQSGLSRQLFDKWCSDKKNACVIPGYVVEGTMAKTIINEPKEVTLASGLTAPLNMQVHYI 403

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADY QTSTFL+ELMPPNIILVHG + EMGRLKQKL++LFADGNTKIITPKNCQSV
Sbjct: 404  SFSAHADYIQTSTFLKELMPPNIILVHGGSIEMGRLKQKLVSLFADGNTKIITPKNCQSV 463

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EM+FNS+K AK IG+LA K P  GETVSGLLVKKGFTYQIM P+DL +FSQLST +V QR
Sbjct: 464  EMHFNSQKTAKAIGKLAAKPPAAGETVSGLLVKKGFTYQIMAPEDLHVFSQLSTGNVIQR 523

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYSGAF VIKHRLKQIY               L VHERVT+K+ESE HVS+ W +DP
Sbjct: 524  ITIPYSGAFAVIKHRLKQIYESVDPTIDEESGVEALRVHERVTVKRESENHVSLHWAADP 583

Query: 1622 ISDMISDSVVAMILNISREMP-XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNG-P 1795
            ISDM+SDSVVA++LN SR++P                      H+LLVSLFGDVK  G  
Sbjct: 584  ISDMVSDSVVALVLNASRDLPKVVVESEETGGEEAAKKGDKIVHALLVSLFGDVKYGGEE 643

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GK+VINVDGNVA+LD +SG+VESENE L+ERVRTAFRRI  A+KPIPL  S
Sbjct: 644  GKVVINVDGNVAHLDKRSGEVESENEGLKERVRTAFRRISGAVKPIPLQES 694


>ref|XP_004485469.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Cicer arietinum]
          Length = 687

 Score = 1061 bits (2743), Expect = 0.0
 Identities = 530/650 (81%), Positives = 577/650 (88%), Gaps = 2/650 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KTVLFDCGIHPAYSGMAALPYFDEIDPST+DVLL+THFHLDHAASLPYFLEKTTF+G
Sbjct: 39   YKGKTVLFDCGIHPAYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFRG 98

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMT+ATKAIYKLLLSDYVKVSKVS+EDML+DEQDI RSMD+IEVIDFHQTLEVNGIRF
Sbjct: 99   RVFMTYATKAIYKLLLSDYVKVSKVSIEDMLFDEQDINRSMDKIEVIDFHQTLEVNGIRF 158

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPD+CIIESTYGVQ 
Sbjct: 159  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQH 218

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR  REKRFTDVIHSTISQGGRVLIP FALGRAQELLLILDEYW+NHPE  NIPIYYA
Sbjct: 219  HQPRHTREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYA 278

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+C+ VY+TY  +MNDRI+N  A SNPF FKHIS L SI+ F+DVGPSVVMASPGG
Sbjct: 279  SPLAKKCLTVYETYTLSMNDRIQN--AKSNPFSFKHISALSSIDIFKDVGPSVVMASPGG 336

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKNAC++PGYVVEGTLAKTIINEPKEVTLMNGL+APLNMQVHYI
Sbjct: 337  LQSGLSRQLFDMWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLMNGLSAPLNMQVHYI 396

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD AQTS FL+EL PPNIILVHGEANEMGRLKQKL + FAD NTKI+TPKNCQSV
Sbjct: 397  SFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLTSQFADRNTKILTPKNCQSV 456

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNS+KMAKTIG+LAEKTPEVGETVSGLLVKKGFTYQIM PDDL +FSQLSTA+VTQR
Sbjct: 457  EMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQR 516

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYSGAF VI+HRLKQIY              TLLVHERVT+K E+EKHVS+ WTSDP
Sbjct: 517  ITIPYSGAFSVIQHRLKQIYESVELSVDEESGVPTLLVHERVTVKHETEKHVSLHWTSDP 576

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            ISDM+SDSVVA++LNISR++P                       H+LL SLFGDVK+   
Sbjct: 577  ISDMVSDSVVALVLNISRDLPKIMAESDAVKIEEANEKKAEKVMHALLNSLFGDVKVGEN 636

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSA 1945
            GKL+IN+DGNVA L+ +SG+VESENE L+ERVRTAFRRIQS++KPIPLSA
Sbjct: 637  GKLIINIDGNVAELNKESGEVESENEGLKERVRTAFRRIQSSVKPIPLSA 686


>ref|XP_006300311.1| hypothetical protein CARUB_v10019868mg [Capsella rubella]
            gi|482569021|gb|EOA33209.1| hypothetical protein
            CARUB_v10019868mg [Capsella rubella]
          Length = 725

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 522/652 (80%), Positives = 580/652 (88%), Gaps = 3/652 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            ++ K +LFDCGIHPAYSGMAALPYFDEIDPSTIDVLL+THFH+DHAASLPYFLEKTTF G
Sbjct: 74   FRGKNILFDCGIHPAYSGMAALPYFDEIDPSTIDVLLITHFHIDHAASLPYFLEKTTFNG 133

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI +SMD+IEVIDFHQT+EVNGI+F
Sbjct: 134  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKF 193

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVR+LYTGDYSREEDRHLRAAE PQFSPDICIIEST GVQL
Sbjct: 194  WCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQL 253

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQ R +REKRFTDVIHST++QGGRVLIP FALGRAQELLLILDEYW+NHP+ HNIPIYYA
Sbjct: 254  HQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYA 313

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MNDRIRNQFANSNPF FKHISPL SI++F DVGPSVVMA+PGG
Sbjct: 314  SPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFRDVGPSVVMATPGG 373

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD WCSDKKNACI+PGY+VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 374  LQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 433

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEM RLKQKL T F DGNTKI+TPKNC+SV
Sbjct: 434  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNCESV 493

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEK+AKTIGRLAEKTP+VG+TVSG+LVKKGFTYQIM PD+L +FSQLSTA+VTQR
Sbjct: 494  EMYFNSEKLAKTIGRLAEKTPDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQR 553

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P++GAFGVIKHRL++I+               L VHERVT+KQESEKH+S+ W+SDP
Sbjct: 554  ITIPFAGAFGVIKHRLEKIFESVESSTDEESGLPALKVHERVTVKQESEKHISLQWSSDP 613

Query: 1622 ISDMISDSVVAMILNISREMP---XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNG 1792
            ISDM+SDS+VA++LNISRE+P                        ++LLVSLFGDVK+  
Sbjct: 614  ISDMVSDSIVALVLNISREVPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGE 673

Query: 1793 PGKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
             GKLVI VDGNVA LD +SG+VESE+  L+ERVR AF RIQSA+KPIPLSAS
Sbjct: 674  NGKLVIRVDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 725


>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 73-I
            [Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
            cleavage and polyadenylation specificity factor subunit
            73-I [Arabidopsis thaliana]
            gi|79320389|ref|NP_001031215.1| cleavage and
            polyadenylation specificity factor subunit 73-I
            [Arabidopsis thaliana]
            gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 3-I; AltName: Full=Cleavage and polyadenylation
            specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
            Short=CPSF 73 kDa subunit I
            gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
            and polyadenylation specificity factor; 72745-70039
            [Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
            putative cleavage and polyadenylation specificity factor
            [Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
            putative cleavage and polyadenylation specificity factor
            73 kDa subunit [Arabidopsis thaliana]
            gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
            thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
            [Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
            cleavage and polyadenylation specificity factor subunit
            3-I [Arabidopsis thaliana]
          Length = 693

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 522/652 (80%), Positives = 580/652 (88%), Gaps = 3/652 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            ++ K +LFDCGIHPAYSGMAALPYFDEIDPS+IDVLL+THFH+DHAASLPYFLEKTTF G
Sbjct: 42   FRGKNILFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNG 101

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI +SMD+IEVIDFHQT+EVNGI+F
Sbjct: 102  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKF 161

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVR+LYTGDYSREEDRHLRAAE PQFSPDICIIEST GVQL
Sbjct: 162  WCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQL 221

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQ R +REKRFTDVIHST++QGGRVLIP FALGRAQELLLILDEYW+NHP+ HNIPIYYA
Sbjct: 222  HQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYA 281

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MNDRIRNQFANSNPF FKHISPL SI++F DVGPSVVMA+PGG
Sbjct: 282  SPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGG 341

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD WCSDKKNACI+PGY+VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 342  LQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 401

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEM RLKQKL+T F DGNTKI+TPKNC+SV
Sbjct: 402  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESV 461

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEK+AKTIGRLAEKTP+VG+TVSG+LVKKGFTYQIM PD+L +FSQLSTA+VTQR
Sbjct: 462  EMYFNSEKLAKTIGRLAEKTPDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQR 521

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P+ GAFGVIKHRL++I+               L VHERVT+KQESEKH+S+ W+SDP
Sbjct: 522  ITIPFVGAFGVIKHRLEKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDP 581

Query: 1622 ISDMISDSVVAMILNISREMP---XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNG 1792
            ISDM+SDS+VA+ILNISRE+P                        ++LLVSLFGDVK+  
Sbjct: 582  ISDMVSDSIVALILNISREVPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGE 641

Query: 1793 PGKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
             GKLVI VDGNVA LD +SG+VESE+  L+ERVR AF RIQSA+KPIPLSAS
Sbjct: 642  NGKLVIRVDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693


>gb|AAL66977.1| putative cleavage and polyadenylation specificity factor [Arabidopsis
            thaliana]
          Length = 693

 Score = 1055 bits (2728), Expect = 0.0
 Identities = 521/652 (79%), Positives = 579/652 (88%), Gaps = 3/652 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            ++ K +LFDCGIHPAYSGMAALPYFDEIDPS+IDVLL+THFH+DHAASLPYFLEKTTF G
Sbjct: 42   FRGKNILFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNG 101

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI +SMD+IEVIDFHQT+EVNGI+F
Sbjct: 102  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKF 161

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVR+LYTGDYSREEDRHLRAAE PQFSPDICIIEST GVQL
Sbjct: 162  WCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQL 221

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQ R +REKRFTDVIHST++QGGRVLIP FALGRAQELLLILDEYW+NHP+ HNIPIYYA
Sbjct: 222  HQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYA 281

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MNDRIRNQFANSNPF FKHISPL SI++F DVGPSVVMA+PGG
Sbjct: 282  SPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGG 341

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD WCSDKKNACI+PGY+VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 342  LQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 401

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEM RLKQKL+T F DGNTKI+TPKNC+SV
Sbjct: 402  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESV 461

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEK+AKTIGRLAEKTP+VG+TVSG+LVKKGFTYQIM PD+L +FSQLSTA+VTQR
Sbjct: 462  EMYFNSEKLAKTIGRLAEKTPDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQR 521

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P+ GAFGVIKHRL++I+               L VHERVT+KQESEKH+S+ W+SDP
Sbjct: 522  ITIPFVGAFGVIKHRLEKIFESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDP 581

Query: 1622 ISDMISDSVVAMILNISREMP---XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNG 1792
            ISDM+SDS+VA+ILNISRE+P                        ++LLVSLFGDVK+  
Sbjct: 582  ISDMVSDSIVALILNISREVPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGE 641

Query: 1793 PGKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
             GKLVI VD NVA LD +SG+VESE+  L+ERVR AF RIQSA+KPIPLSAS
Sbjct: 642  NGKLVIRVDSNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693


>ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp.
            lyrata] gi|297332410|gb|EFH62828.1| hypothetical protein
            ARALYDRAFT_475225 [Arabidopsis lyrata subsp. lyrata]
          Length = 693

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 521/652 (79%), Positives = 578/652 (88%), Gaps = 3/652 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            ++ K +LFDCGIHPAYSGMAALPYFDEIDPS+IDVLL+THFH+DHAASLPYFLEKTTF G
Sbjct: 42   FRGKNILFDCGIHPAYSGMAALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNG 101

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLL+DYVKVSKVSVEDML+DEQDI +SMD+IEVIDFHQT+EVNGI+F
Sbjct: 102  RVFMTHATKAIYKLLLTDYVKVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKF 161

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVR+LYTGDYSREEDRHLRAAE PQFSPDICIIEST GVQL
Sbjct: 162  WCYTAGHVLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQL 221

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQ R +REKRFTDVIHST++QGGRVLIP FALGRAQELLLILDEYW+NHP+ HNIPIYYA
Sbjct: 222  HQSRHIREKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYA 281

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+CMAVYQTYI +MNDRIRNQFANSNPF FKHISPL SI++F DVGPSVVMA+PGG
Sbjct: 282  SPLAKKCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGG 341

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD WCSDKKNACI+PGY+VEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 342  LQSGLSRQLFDSWCSDKKNACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 401

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHGEANEM RLKQKL T F DGNTKI+TPKNC+SV
Sbjct: 402  SFSAHADYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLFTEFPDGNTKIMTPKNCESV 461

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNSEK+AKTIGRLA KTP+VG+TVSG+LVKKGFTYQIM PD+L +FSQLSTA+VTQR
Sbjct: 462  EMYFNSEKLAKTIGRLAGKTPDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQR 521

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++P+ GAFGVIKHRL++I+               L VHERVT+KQESEKH+S+ W+SDP
Sbjct: 522  ITIPFVGAFGVIKHRLEKIFESVESSTDEESGLPALKVHERVTVKQESEKHISLQWSSDP 581

Query: 1622 ISDMISDSVVAMILNISREMP---XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNG 1792
            ISDM+SDS+VA+ILNISRE+P                        ++LLVSLFGDVK+  
Sbjct: 582  ISDMVSDSIVALILNISREVPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGE 641

Query: 1793 PGKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
             GKLVI VDGNVA LD +SG+VESE+  L+ERVR AF RIQSA+KPIPLSAS
Sbjct: 642  NGKLVIRVDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693


>ref|XP_003540154.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I isoform X1 [Glycine max]
            gi|571493830|ref|XP_006592669.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 3-I isoform X2
            [Glycine max]
          Length = 689

 Score = 1048 bits (2710), Expect = 0.0
 Identities = 523/650 (80%), Positives = 574/650 (88%), Gaps = 2/650 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK KTVLFDCGIHPAYSGMAALPYFDEIDPST+DVLL+THFHLDHAASLPYFLEKTTF+G
Sbjct: 41   YKGKTVLFDCGIHPAYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFRG 100

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMT+ATKAIYKLLLSD+VKVSKVSVEDML+DEQDI RSMD+IEVIDFHQT+EVNGIRF
Sbjct: 101  RVFMTYATKAIYKLLLSDFVKVSKVSVEDMLFDEQDINRSMDKIEVIDFHQTVEVNGIRF 160

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPD+CIIESTYGVQ 
Sbjct: 161  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQH 220

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR  REKRFTDVIHSTISQGGRVLIP FALGRAQELLLILDEYW+NHPE  NIPIYYA
Sbjct: 221  HQPRHTREKRFTDVIHSTISQGGRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYA 280

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+C+ VY+TY  +MNDRI+N  A SNPF FKH+S L SIE F+DVGPSVVMASPGG
Sbjct: 281  SPLAKKCLTVYETYTLSMNDRIQN--AKSNPFSFKHVSALSSIEVFKDVGPSVVMASPGG 338

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFDMWCSDKKN+C+LPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 339  LQSGLSRQLFDMWCSDKKNSCVLPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 398

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD AQTS FL+EL PPNIILVHGEANEMGRLKQKLI+ FAD NTKI+TPKNCQSV
Sbjct: 399  SFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLISQFADRNTKILTPKNCQSV 458

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNS+KMAKTIG+LAEKTPEVGETVSGLLVKKGFTYQIM  DDL +FSQLSTA++TQR
Sbjct: 459  EMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAADDLHVFSQLSTANITQR 518

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYSGAF VI+HRLKQIY              TL VHE VT+K ESEKHVS+ W SDP
Sbjct: 519  ITIPYSGAFNVIQHRLKQIYESVAQSVDEESGVPTLQVHECVTVKHESEKHVSLHWASDP 578

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            +SDM+SDS+VA++LNI+R++P                        +LLVSLFGDVK+   
Sbjct: 579  MSDMVSDSIVALVLNINRDVPKIVNESDAIKIEEENEKKAEKVMQALLVSLFGDVKVGEN 638

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSA 1945
            GKL+IN+DGNVA L+ +SG+VESENE L+ERVRTAFRRIQS++KPIP+SA
Sbjct: 639  GKLIINIDGNVAELNKESGEVESENEGLKERVRTAFRRIQSSVKPIPVSA 688


>ref|XP_007148539.1| hypothetical protein PHAVU_006G217100g [Phaseolus vulgaris]
            gi|561021762|gb|ESW20533.1| hypothetical protein
            PHAVU_006G217100g [Phaseolus vulgaris]
          Length = 690

 Score = 1047 bits (2708), Expect = 0.0
 Identities = 522/650 (80%), Positives = 573/650 (88%), Gaps = 2/650 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            YK K VLFDCGIHPAYSGMAALPYFDEIDPST+DVLL+THFHLDHAASLPYFLEKTTF+G
Sbjct: 42   YKGKIVLFDCGIHPAYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFRG 101

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMT+ATKAIYKLLLSD+VKVSKVSVEDMLYDEQDI RSMD+IEVIDFHQTLEVNGIRF
Sbjct: 102  RVFMTYATKAIYKLLLSDFVKVSKVSVEDMLYDEQDINRSMDKIEVIDFHQTLEVNGIRF 161

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPD+CIIESTYG+Q 
Sbjct: 162  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGIQH 221

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            HQPR  REKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYW NHPE  NIPIYYA
Sbjct: 222  HQPRHTREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWENHPELQNIPIYYA 281

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLAK+C+ VY+TY  +MNDRI+N  A SNPF FKH+S L SI+ F+DVGPSVVMASPGG
Sbjct: 282  SPLAKKCLTVYETYTLSMNDRIKN--AKSNPFSFKHVSALSSIDVFKDVGPSVVMASPGG 339

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLF+MWCSDKKNAC+LPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI
Sbjct: 340  LQSGLSRQLFEMWCSDKKNACVLPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 399

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHAD AQTS FL+EL PPNIILVHGEANEMGRLKQKL++ FAD NTKI+TPKNCQSV
Sbjct: 400  SFSAHADSAQTSAFLEELNPPNIILVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSV 459

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EMYFNS+KMAKTIG+LAEKTPEVGETVSGLLVKKGFTYQIM PDDL +FSQLSTAS+TQR
Sbjct: 460  EMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTASITQR 519

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYS AF VI+HRLKQIY              TL VH+ VT+KQESEKH+S+ W +DP
Sbjct: 520  ITIPYSCAFNVIRHRLKQIYESVEQSVDEESGVPTLQVHDCVTVKQESEKHISLHWAADP 579

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            I DM+SDS+VA+ILNISR++P                       H+LLVSLFGDVK +  
Sbjct: 580  IGDMVSDSIVALILNISRDVPKIMDEADAVKIEEESEKKAEKVMHALLVSLFGDVKKSEN 639

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSA 1945
            GKL+I++DGNVA L+ +SG+VESENE L+ERV+TAFRRIQS++KPIPL A
Sbjct: 640  GKLIISIDGNVAELNKESGEVESENEGLKERVKTAFRRIQSSVKPIPLPA 689


>ref|XP_006357977.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            3-I-like [Solanum tuberosum]
          Length = 695

 Score = 1045 bits (2701), Expect = 0.0
 Identities = 518/651 (79%), Positives = 570/651 (87%), Gaps = 2/651 (0%)
 Frame = +2

Query: 2    YKAKTVLFDCGIHPAYSGMAALPYFDEIDPSTIDVLLVTHFHLDHAASLPYFLEKTTFKG 181
            +K KT++FDCGIHP YSGM+ALPYFDEIDPS+IDVLLVTHFHLDHAASLPYFLEKTTFKG
Sbjct: 45   FKGKTIMFDCGIHPGYSGMSALPYFDEIDPSSIDVLLVTHFHLDHAASLPYFLEKTTFKG 104

Query: 182  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLYDEQDILRSMDRIEVIDFHQTLEVNGIRF 361
            RVFMTHATKAIYKLLLSDYVKVSKVSVEDML+DE DILRSM++IEVIDFHQT+EVNGIRF
Sbjct: 105  RVFMTHATKAIYKLLLSDYVKVSKVSVEDMLFDEHDILRSMEKIEVIDFHQTMEVNGIRF 164

Query: 362  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDICIIESTYGVQL 541
            WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPD+CIIESTYGVQL
Sbjct: 165  WCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQL 224

Query: 542  HQPRLVREKRFTDVIHSTISQGGRVLIPVFALGRAQELLLILDEYWSNHPEFHNIPIYYA 721
            H PR +REK FTDVIHST+ QGGRVLIP +ALGRAQELLLIL+EYWSNHPE  N PIYYA
Sbjct: 225  HMPRQIREKLFTDVIHSTLMQGGRVLIPAYALGRAQELLLILEEYWSNHPELANFPIYYA 284

Query: 722  SPLAKRCMAVYQTYINAMNDRIRNQFANSNPFDFKHISPLKSIENFEDVGPSVVMASPGG 901
            SPLA+RCMAVYQTYINAMN+RIRNQF +SNPF+FKHIS L SIE+F D  P VVMASPG 
Sbjct: 285  SPLARRCMAVYQTYINAMNERIRNQFVSSNPFNFKHISSLNSIEDFIDNKPCVVMASPGS 344

Query: 902  LQSGLSRQLFDMWCSDKKNACILPGYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYI 1081
            LQSGLSRQLFD WCSDKKNAC++PGYVVEGTLAKTIINEPKEVTL NGL+APLNMQVHYI
Sbjct: 345  LQSGLSRQLFDKWCSDKKNACVIPGYVVEGTLAKTIINEPKEVTLTNGLSAPLNMQVHYI 404

Query: 1082 SFSAHADYAQTSTFLQELMPPNIILVHGEANEMGRLKQKLITLFADGNTKIITPKNCQSV 1261
            SFSAHADYAQTSTFL+ELMPPNIILVHG +NEM RLKQKL +LFADGNTKIITPKNCQSV
Sbjct: 405  SFSAHADYAQTSTFLKELMPPNIILVHGASNEMDRLKQKLTSLFADGNTKIITPKNCQSV 464

Query: 1262 EMYFNSEKMAKTIGRLAEKTPEVGETVSGLLVKKGFTYQIMTPDDLPIFSQLSTASVTQR 1441
            EM+FNSEKMAKTIG+LAEKTPE GE VSGLLVKKGFTYQIM PDDL +FSQLSTA+VTQR
Sbjct: 465  EMHFNSEKMAKTIGKLAEKTPEAGEIVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQR 524

Query: 1442 ISVPYSGAFGVIKHRLKQIYXXXXXXXXXXXXGLTLLVHERVTIKQESEKHVSILWTSDP 1621
            I++PYSGAF VI+HRLKQIY              TL VHERVT+KQESE H+S+ WT+DP
Sbjct: 525  ITIPYSGAFAVIQHRLKQIYESVESSTDEESGVPTLRVHERVTVKQESENHLSVHWTADP 584

Query: 1622 ISDMISDSVVAMILNISREMP--XXXXXXXXXXXXXXXXXXXXXHSLLVSLFGDVKMNGP 1795
            I DM+SDSVVA++LN SREMP                       H+LLVS+FG+VK    
Sbjct: 585  ICDMVSDSVVALVLNASREMPKVSIDSETSINEEEDAKKTEKIVHALLVSMFGNVKFGDD 644

Query: 1796 GKLVINVDGNVANLDTQSGDVESENESLRERVRTAFRRIQSAMKPIPLSAS 1948
            GKL+IN DG +A+LD Q+GDVE ENE+L+ERV+TA+ RI+SA+KPIPLS S
Sbjct: 645  GKLIINFDGILAHLDKQTGDVECENEALKERVKTAYWRIRSAVKPIPLSVS 695