BLASTX nr result

ID: Cocculus23_contig00006235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00006235
         (843 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524976.1| Multidrug resistance protein mdtG, putative ...    60   1e-06
ref|XP_006832881.1| hypothetical protein AMTR_s00095p00099600, p...    58   4e-06

>ref|XP_002524976.1| Multidrug resistance protein mdtG, putative [Ricinus communis]
           gi|223535720|gb|EEF37383.1| Multidrug resistance protein
           mdtG, putative [Ricinus communis]
          Length = 384

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 25/54 (46%), Positives = 35/54 (64%)
 Frame = -2

Query: 257 MAENREPLLKKVYYKDCPGCKIDQHKETRQVIPYNEFTYVSVVTLCNGRTVCGI 96
           M+ + EPLLKK YY++CPGCK+DQ KE R  +P  EF  + +V LC    +  +
Sbjct: 1   MSSSTEPLLKKNYYENCPGCKVDQIKELRTGLPIKEFVSIWIVVLCTALPISSL 54


>ref|XP_006832881.1| hypothetical protein AMTR_s00095p00099600, partial [Amborella
           trichopoda] gi|548837381|gb|ERM98159.1| hypothetical
           protein AMTR_s00095p00099600, partial [Amborella
           trichopoda]
          Length = 442

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = -2

Query: 257 MAENREPLLK-KVYYKDCPGCKIDQHKETRQVIPYNEFTYVSVVTLCNGRTVCGI 96
           MAEN E LLK K YY++CPGCK+DQ KE  +  P  E  ++++V LCN   +  +
Sbjct: 1   MAENEEALLKTKDYYENCPGCKVDQMKEINRGFPLKECFFIAIVVLCNALPISSL 55


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