BLASTX nr result
ID: Cocculus23_contig00004797
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00004797
(781 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 198 2e-48
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 188 2e-45
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 188 2e-45
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 188 2e-45
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 187 5e-45
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun... 182 9e-44
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no... 182 1e-43
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 176 1e-41
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 175 2e-41
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 175 2e-41
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 174 3e-41
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 174 3e-41
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su... 173 6e-41
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su... 173 6e-41
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su... 173 6e-41
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 172 1e-40
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 172 1e-40
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 170 6e-40
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas... 163 7e-38
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas... 163 7e-38
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 198 bits (503), Expect = 2e-48
Identities = 100/207 (48%), Positives = 143/207 (69%), Gaps = 3/207 (1%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
+PG IKAAK G+KD+L G +DA+AWGR +GTG QFDI+YSGKGHE+ PVDV+++L
Sbjct: 1243 SPGACMIKAAKAGIKDNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLL 1302
Query: 601 SNSLISQKKNVKVKVASAHKN-VSNKWEAVSLSHDPAS--KGHVNPKFITDSVVKENHSW 431
+K+N K++ S KN +S K+ A + + S KG ++ S++++ +
Sbjct: 1303 GGQSTCEKQNTKIE--SLDKNTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTL 1360
Query: 430 NYVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKH 251
N + +S +LR +L KYS+++ LNE DKS L AL FHPH ++K+G G QDIK+G H K+
Sbjct: 1361 NDIQKLSFALRTILHKYSLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKY 1420
Query: 250 QKSRCFMLVRTDGTIEDFSYRKCVMGA 170
Q +RCF+L+R+DGT EDFSY KCV+GA
Sbjct: 1421 QNTRCFVLIRSDGTTEDFSYHKCVLGA 1447
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 188 bits (478), Expect = 2e-45
Identities = 98/204 (48%), Positives = 139/204 (68%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SFIKAAK G D+L G VDA+ WG+ +GTG FDIIYSG+G ++ PVDV+++L
Sbjct: 1219 NPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLL 1278
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S +S K+N K+KV A +S+K A G+++ + I+ V++++ ++N V
Sbjct: 1279 STP-VSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDFETISRGVLRKSWTYNDV 1337
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
+ +S +L+++L KYSI Q L+E DK+ + AL FHP N+KLG DI++ HP+HQ S
Sbjct: 1338 LRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNS 1397
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGA 170
RCF LVR DG+IEDFSY KCV+GA
Sbjct: 1398 RCFSLVREDGSIEDFSYHKCVIGA 1421
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 188 bits (478), Expect = 2e-45
Identities = 98/204 (48%), Positives = 139/204 (68%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SFIKAAK G D+L G VDA+ WG+ +GTG FDIIYSG+G ++ PVDV+++L
Sbjct: 1257 NPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLL 1316
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S +S K+N K+KV A +S+K A G+++ + I+ V++++ ++N V
Sbjct: 1317 STP-VSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDFETISRGVLRKSWTYNDV 1375
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
+ +S +L+++L KYSI Q L+E DK+ + AL FHP N+KLG DI++ HP+HQ S
Sbjct: 1376 LRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNS 1435
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGA 170
RCF LVR DG+IEDFSY KCV+GA
Sbjct: 1436 RCFSLVREDGSIEDFSYHKCVIGA 1459
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 188 bits (478), Expect = 2e-45
Identities = 98/204 (48%), Positives = 139/204 (68%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SFIKAAK G D+L G VDA+ WG+ +GTG FDIIYSG+G ++ PVDV+++L
Sbjct: 1219 NPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDIIYSGEGRTLSKPVDVYNLL 1278
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S +S K+N K+KV A +S+K A G+++ + I+ V++++ ++N V
Sbjct: 1279 STP-VSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDFETISRGVLRKSWTYNDV 1337
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
+ +S +L+++L KYSI Q L+E DK+ + AL FHP N+KLG DI++ HP+HQ S
Sbjct: 1338 LRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLGIEPPDIEVTYHPEHQNS 1397
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGA 170
RCF LVR DG+IEDFSY KCV+GA
Sbjct: 1398 RCFSLVREDGSIEDFSYHKCVIGA 1421
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 187 bits (474), Expect = 5e-45
Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 2/206 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NP SF+KAAKTG DDL G +DA+AWGR +GTG QFDIIYS K +A PVDV+ +L
Sbjct: 1257 NPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDIIYSVKDQRLAEPVDVYKLL 1316
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSH--DPASKGHVNPKFITDSVVKENHSWN 428
+S+ SQK++V+ +V A S K+ ++ + D AS+ + S+ +E + +
Sbjct: 1317 GSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEELKKIETKRRSIWRELLTLD 1376
Query: 427 YVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQ 248
+ +S +LR +L KY ID L+E D + L AL FHP ++K+GSG Q+IK+G HP+H
Sbjct: 1377 DIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFHPRRDEKIGSGAQEIKVGYHPEHA 1436
Query: 247 KSRCFMLVRTDGTIEDFSYRKCVMGA 170
+RCF LVRTDGTI DFSY KCV+GA
Sbjct: 1437 NARCFSLVRTDGTIVDFSYHKCVLGA 1462
>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
gi|462406650|gb|EMJ12114.1| hypothetical protein
PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 182 bits (463), Expect = 9e-44
Identities = 92/204 (45%), Positives = 134/204 (65%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
+PG FIKAAK GV D+L G V+A+AWG P GTG QFDI+YS +G ++ P++ +D+L
Sbjct: 1139 SPGACFIKAAKGGVVDELHGSVEALAWGNTPPSGTGRQFDILYSKEGLNLSKPLNPYDLL 1198
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
+ + S ++N + + A N +K + S+ + + + SV+++ + N +
Sbjct: 1199 GSQISSSRENA-FETSKAWNNTLDKCDVTSIGLEKSES-------VFKSVIRKYLTINDI 1250
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
+ +L+ +L+KY I++ L E DKSIL AL FHPH DK+GSG+QDIK+G HPKH+ +
Sbjct: 1251 QKWTQTLKRILRKYDINESLTEGDKSILKMALHFHPHKVDKMGSGVQDIKVGQHPKHENA 1310
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGA 170
RCFMLVR D T EDFSY KCV+GA
Sbjct: 1311 RCFMLVRIDRTEEDFSYHKCVLGA 1334
>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
Length = 1410
Score = 182 bits (462), Expect = 1e-43
Identities = 94/204 (46%), Positives = 133/204 (65%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NP FIKAAK V D L G +DA+AWG P+GTG QF++++SGKGHEV P++V+D+L
Sbjct: 1175 NPAACFIKAAKAEVTDGLHGTLDALAWGNIPPLGTGGQFELVFSGKGHEVDKPINVYDML 1234
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
+ + + V + A + S K+ A+ L S+G + I+ +K+ + +
Sbjct: 1235 ATGISPDVQGVN-ETPDAKNHRSVKFGALLLYDKSVSQG-LKKLGISKDRIKKLFKLDDI 1292
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
+S +L ++L KY I+Q L+ DKS L AL FHP ++K+G+G QDIK+ HPKHQ S
Sbjct: 1293 WILSNALAKILNKYPINQSLDHKDKSTLMIALYFHPRIDEKIGTGFQDIKVAYHPKHQSS 1352
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGA 170
RCF+LVR DGT+EDFSYRKCV+GA
Sbjct: 1353 RCFVLVRADGTVEDFSYRKCVLGA 1376
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 176 bits (445), Expect = 1e-41
Identities = 89/204 (43%), Positives = 140/204 (68%), Gaps = 1/204 (0%)
Frame = -1
Query: 778 PGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDILS 599
PGP +KAAK GV D+L G +DA+ WG +G+G QFDII+S KG + P+ V+D+LS
Sbjct: 1219 PGPCLVKAAKVGVVDNLQGSLDALTWGNTPSLGSGGQFDIIFS-KGPVSSKPIKVYDLLS 1277
Query: 598 NSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNP-KFITDSVVKENHSWNYV 422
+ +I+ +N +++ A ++S+K+ A ++ + G++ + IT SV++EN + +
Sbjct: 1278 SQIITNPQN-GFEMSDAPIHLSDKFVAPNMYKN----GYLRKWESITKSVLRENLTIQDI 1332
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
+S +L+ +LQKY +++ +N+ DK +L L+FHPHG+ K+G GI+++K+G HP H+
Sbjct: 1333 DRLSQALKNILQKYDVNERINDMDKQVLMMVLRFHPHGDRKIGLGIKEVKVGHHPDHENV 1392
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGA 170
RCFMLVRTDGTIED SY KC+ GA
Sbjct: 1393 RCFMLVRTDGTIEDVSYHKCICGA 1416
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 175 bits (443), Expect = 2e-41
Identities = 96/209 (45%), Positives = 135/209 (64%), Gaps = 5/209 (2%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SF++AAK G+ D+L G ++++AWG+ +GTGS FDIIYSGKG+E A P+DV+ +L
Sbjct: 1010 NPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLL 1069
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITD--SVVKENH--S 434
N + S VKV + + + SL+ +N K S+ K S
Sbjct: 1070 QNHVTSGTPKVKVTL-----DEDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFIS 1124
Query: 433 WNYVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGI-QDIKIGLHP 257
+N + +S SL+++L KY+ID+ LNE DK I ALQFHP N+K+G G Q+IKIG H
Sbjct: 1125 FNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHK 1184
Query: 256 KHQKSRCFMLVRTDGTIEDFSYRKCVMGA 170
+++ SRCFMLVR+DG++EDFSYRKC+ A
Sbjct: 1185 EYEDSRCFMLVRSDGSVEDFSYRKCMQHA 1213
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 175 bits (443), Expect = 2e-41
Identities = 96/209 (45%), Positives = 135/209 (64%), Gaps = 5/209 (2%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SF++AAK G+ D+L G ++++AWG+ +GTGS FDIIYSGKG+E A P+DV+ +L
Sbjct: 1223 NPGDSFVRAAKMGLSDNLQGSLESLAWGKTPSIGTGSSFDIIYSGKGYEPAEPIDVYTLL 1282
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITD--SVVKENH--S 434
N + S VKV + + + SL+ +N K S+ K S
Sbjct: 1283 QNHVTSGTPKVKVTL-----DEDGGMDGKSLARRLDRLDDLNKKSCKSEWSITKLRSFIS 1337
Query: 433 WNYVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGI-QDIKIGLHP 257
+N + +S SL+++L KY+ID+ LNE DK I ALQFHP N+K+G G Q+IKIG H
Sbjct: 1338 FNDIKKLSQSLKQMLSKYAIDRELNEADKCIAMMALQFHPRRNEKIGKGAPQEIKIGYHK 1397
Query: 256 KHQKSRCFMLVRTDGTIEDFSYRKCVMGA 170
+++ SRCFMLVR+DG++EDFSYRKC+ A
Sbjct: 1398 EYEDSRCFMLVRSDGSVEDFSYRKCMQHA 1426
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 174 bits (441), Expect = 3e-41
Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
+PG FIKA K V D+L G +DA+AWG+ +G+G FDI+YS KGHE+A P D++ +L
Sbjct: 1264 SPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLL 1323
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEA--VSLSHDPASKGHVNPKFITDSVVKENHSWN 428
+ ++N+KVKV + K A V + D ASKG + + I+ SV++ S N
Sbjct: 1324 GSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLN 1383
Query: 427 YVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQ 248
+ +S L+ +LQKY I+ L+E DK+ L AL FHP ++K+G G Q+IK+ H K+
Sbjct: 1384 DIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYH 1443
Query: 247 KSRCFMLVRTDGTIEDFSYRKCVMGA 170
+RCF LVRTDGT EDFSY KCV GA
Sbjct: 1444 NTRCFSLVRTDGTEEDFSYHKCVHGA 1469
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 174 bits (441), Expect = 3e-41
Identities = 94/206 (45%), Positives = 131/206 (63%), Gaps = 2/206 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
+PG FIKA K V D+L G +DA+AWG+ +G+G FDI+YS KGHE+A P D++ +L
Sbjct: 1122 SPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLL 1181
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEA--VSLSHDPASKGHVNPKFITDSVVKENHSWN 428
+ ++N+KVKV + K A V + D ASKG + + I+ SV++ S N
Sbjct: 1182 GSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLN 1241
Query: 427 YVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQ 248
+ +S L+ +LQKY I+ L+E DK+ L AL FHP ++K+G G Q+IK+ H K+
Sbjct: 1242 DIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYH 1301
Query: 247 KSRCFMLVRTDGTIEDFSYRKCVMGA 170
+RCF LVRTDGT EDFSY KCV GA
Sbjct: 1302 NTRCFSLVRTDGTEEDFSYHKCVHGA 1327
>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
[Glycine max]
Length = 1381
Score = 173 bits (439), Expect = 6e-41
Identities = 94/220 (42%), Positives = 136/220 (61%), Gaps = 1/220 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG FIKAAK+G D+L G +D +AWG + MGT FD+IYS KGH+VA VDV+++L
Sbjct: 1162 NPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELL 1221
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S K N K+ HK S+K + H ++ T +++ + N +
Sbjct: 1222 EASF--DKPNNKIGT-HLHKYSSDKCGS-EFRHKNGYALKEGKQWKT--ILRNFVTVNDI 1275
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
++ + R +L KYSID+ L+E+D+S + L FHPH ++K G G QDIK+G HPK++ S
Sbjct: 1276 QKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDS 1335
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGAATAC-KLSSKLIDRLW 125
RCF ++RTDGT+EDFSYRKC++GA SK+ ++ W
Sbjct: 1336 RCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSKIQEKKW 1375
>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Glycine max]
Length = 1457
Score = 173 bits (439), Expect = 6e-41
Identities = 94/220 (42%), Positives = 136/220 (61%), Gaps = 1/220 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG FIKAAK+G D+L G +D +AWG + MGT FD+IYS KGH+VA VDV+++L
Sbjct: 1238 NPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELL 1297
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S K N K+ HK S+K + H ++ T +++ + N +
Sbjct: 1298 EASF--DKPNNKIGT-HLHKYSSDKCGS-EFRHKNGYALKEGKQWKT--ILRNFVTVNDI 1351
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
++ + R +L KYSID+ L+E+D+S + L FHPH ++K G G QDIK+G HPK++ S
Sbjct: 1352 QKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDS 1411
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGAATAC-KLSSKLIDRLW 125
RCF ++RTDGT+EDFSYRKC++GA SK+ ++ W
Sbjct: 1412 RCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSKIQEKKW 1451
>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Glycine max]
Length = 1458
Score = 173 bits (439), Expect = 6e-41
Identities = 94/220 (42%), Positives = 136/220 (61%), Gaps = 1/220 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG FIKAAK+G D+L G +D +AWG + MGT FD+IYS KGH+VA VDV+++L
Sbjct: 1239 NPGSCFIKAAKSGATDNLQGSLDGLAWGNCLSMGTSGMFDVIYSEKGHQVAKSVDVYELL 1298
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S K N K+ HK S+K + H ++ T +++ + N +
Sbjct: 1299 EASF--DKPNNKIGT-HLHKYSSDKCGS-EFRHKNGYALKEGKQWKT--ILRNFVTVNDI 1352
Query: 421 VTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQKS 242
++ + R +L KYSID+ L+E+D+S + L FHPH ++K G G QDIK+G HPK++ S
Sbjct: 1353 QKLTFASRCILNKYSIDELLSESDRSTMLRVLNFHPHKSEKFGIGPQDIKVGWHPKYKDS 1412
Query: 241 RCFMLVRTDGTIEDFSYRKCVMGAATAC-KLSSKLIDRLW 125
RCF ++RTDGT+EDFSYRKC++GA SK+ ++ W
Sbjct: 1413 RCFHIIRTDGTVEDFSYRKCILGALDIVDPKKSKIQEKKW 1452
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 172 bits (436), Expect = 1e-40
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG +F+KAAK+GV D+L G +D +AWG + MGT QFD++YS K E+A VDV+D+L
Sbjct: 1244 NPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELAKSVDVYDLL 1303
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITD--SVVKENHSWN 428
S + + ++ + ++ S+K + H KG PK SV++ + N
Sbjct: 1304 ETSF--DQLDQEINTSQSNNYSSDKCNS-QFRH---KKGRYAPKEPKQWKSVIRNFMTAN 1357
Query: 427 YVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQ 248
+ ++ + R +L KY IDQ L+E DK + L FHP N+KLGSG Q IK+G HPK
Sbjct: 1358 DIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIKVGWHPKFT 1417
Query: 247 KSRCFMLVRTDGTIEDFSYRKCVMGA 170
SRCF ++RTDGT+EDFSYRKC++GA
Sbjct: 1418 DSRCFFIIRTDGTVEDFSYRKCILGA 1443
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 172 bits (436), Expect = 1e-40
Identities = 91/206 (44%), Positives = 129/206 (62%), Gaps = 2/206 (0%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG +F+KAAK+GV D+L G +D +AWG + MGT QFD++YS K E+A VDV+D+L
Sbjct: 1245 NPGSTFLKAAKSGVVDNLQGTLDGLAWGNCLSMGTSGQFDVMYSEKVQELAKSVDVYDLL 1304
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITD--SVVKENHSWN 428
S + + ++ + ++ S+K + H KG PK SV++ + N
Sbjct: 1305 ETSF--DQLDQEINTSQSNNYSSDKCNS-QFRH---KKGRYAPKEPKQWKSVIRNFMTAN 1358
Query: 427 YVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKHQ 248
+ ++ + R +L KY IDQ L+E DK + L FHP N+KLGSG Q IK+G HPK
Sbjct: 1359 DIQKLTSASRFILNKYPIDQILSERDKLTIMKVLHFHPRRNEKLGSGPQHIKVGWHPKFT 1418
Query: 247 KSRCFMLVRTDGTIEDFSYRKCVMGA 170
SRCF ++RTDGT+EDFSYRKC++GA
Sbjct: 1419 DSRCFFIIRTDGTVEDFSYRKCILGA 1444
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 170 bits (430), Expect = 6e-40
Identities = 90/207 (43%), Positives = 126/207 (60%), Gaps = 3/207 (1%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SF+KAAK+G+ D+L G +DA+AWG +PMGTG QFDIIYS K E+ VDV+ +L
Sbjct: 1417 NPGSSFLKAAKSGIVDNLQGNLDALAWGNCLPMGTGGQFDIIYSEKVEEINKSVDVYGLL 1476
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASK-GHVNPKFITD--SVVKENHSW 431
S + + + S K+ + S D SK G PK SV++ +
Sbjct: 1477 ETSFNQMDQEINIPQ-------SRKYSSGKCSSDFRSKNGGYTPKEPKQWKSVLRNFMTA 1529
Query: 430 NYVVTMSISLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHPKH 251
N + ++ R +L KY ID+ L+E DK + L FHP ++K GSG Q+IK+G HP+
Sbjct: 1530 NDIQRLTFDARVILNKYQIDETLSETDKLTIMKVLHFHPRRDEKFGSGPQNIKVGWHPEF 1589
Query: 250 QKSRCFMLVRTDGTIEDFSYRKCVMGA 170
SRCF ++R DG++EDFSYRKC++GA
Sbjct: 1590 TDSRCFFIIRKDGSVEDFSYRKCILGA 1616
>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031869|gb|ESW30448.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1464
Score = 163 bits (412), Expect = 7e-38
Identities = 100/227 (44%), Positives = 128/227 (56%), Gaps = 6/227 (2%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SFIKAAK+ + D+L G +DA+AWG MGT FDIIYS KGHEV VDV+ +L
Sbjct: 1235 NPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKAVDVYKLL 1294
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S K N K+ AH N S K + H N + +N N+V
Sbjct: 1295 EASF--DKPNNKIGF-HAHNNSSGKCGS--------EFRHKNGYAFKEGKQWKNILRNFV 1343
Query: 421 VTMSI-----SLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHP 257
I + R +L KY ID+ L+E D+S + L FHP ++KLG G QDIK+G HP
Sbjct: 1344 TVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKVGWHP 1403
Query: 256 KHQKSRCFMLVRTDGTIEDFSYRKCVMGAATAC-KLSSKLIDRLWMA 119
K + SRCF +VRTDGT+EDFSYRKC++ A SK+ + W A
Sbjct: 1404 KFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKMSKIQKKKWSA 1450
>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
gi|561031868|gb|ESW30447.1| hypothetical protein
PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 163 bits (412), Expect = 7e-38
Identities = 100/227 (44%), Positives = 128/227 (56%), Gaps = 6/227 (2%)
Frame = -1
Query: 781 NPGPSFIKAAKTGVKDDLLGVVDAVAWGRRVPMGTGSQFDIIYSGKGHEVATPVDVFDIL 602
NPG SFIKAAK+ + D+L G +DA+AWG MGT FDIIYS KGHEV VDV+ +L
Sbjct: 1234 NPGRSFIKAAKSELTDNLQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKAVDVYKLL 1293
Query: 601 SNSLISQKKNVKVKVASAHKNVSNKWEAVSLSHDPASKGHVNPKFITDSVVKENHSWNYV 422
S K N K+ AH N S K + H N + +N N+V
Sbjct: 1294 EASF--DKPNNKIGF-HAHNNSSGKCGS--------EFRHKNGYAFKEGKQWKNILRNFV 1342
Query: 421 VTMSI-----SLREVLQKYSIDQFLNENDKSILTSALQFHPHGNDKLGSGIQDIKIGLHP 257
I + R +L KY ID+ L+E D+S + L FHP ++KLG G QDIK+G HP
Sbjct: 1343 TVNDIQKLTTASRCILNKYEIDELLSEFDRSTILRVLNFHPRRSEKLGIGPQDIKVGWHP 1402
Query: 256 KHQKSRCFMLVRTDGTIEDFSYRKCVMGAATAC-KLSSKLIDRLWMA 119
K + SRCF +VRTDGT+EDFSYRKC++ A SK+ + W A
Sbjct: 1403 KFKDSRCFHIVRTDGTVEDFSYRKCILRALEVVDPKMSKIQKKKWSA 1449