BLASTX nr result
ID: Cocculus23_contig00004774
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00004774
(393 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525113.1| splicing factor u2af large subunit, putative... 85 1e-14
ref|XP_007203764.1| hypothetical protein PRUPE_ppa003118mg [Prun... 84 2e-14
ref|XP_007203763.1| hypothetical protein PRUPE_ppa003118mg [Prun... 84 2e-14
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni... 83 3e-14
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni... 83 3e-14
ref|XP_007009946.1| Splicing factor U2af large subunit A isoform... 83 5e-14
ref|XP_007009945.1| Splicing factor U2af large subunit A isoform... 83 5e-14
ref|XP_007009944.1| Splicing factor U2af large subunit A isoform... 83 5e-14
ref|XP_007009943.1| Splicing factor U2af large subunit A isoform... 83 5e-14
ref|XP_007046990.1| Splicing factor U2af large subunit A isoform... 82 6e-14
ref|XP_006466765.1| PREDICTED: splicing factor U2af large subuni... 82 1e-13
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni... 82 1e-13
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr... 82 1e-13
ref|XP_006346938.1| PREDICTED: splicing factor U2af large subuni... 79 5e-13
ref|XP_004300618.1| PREDICTED: splicing factor U2af large subuni... 79 5e-13
ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Popu... 78 1e-12
ref|XP_007046989.1| Splicing factor U2af large subunit A isoform... 78 1e-12
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni... 78 1e-12
emb|CBI17547.3| unnamed protein product [Vitis vinifera] 78 1e-12
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera] 78 1e-12
>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
gi|223535572|gb|EEF37240.1| splicing factor u2af large
subunit, putative [Ricinus communis]
Length = 549
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT P++PGMFPNMF GQ FGTL +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 211 GQIPGTAPAIPGMFPNMFPLGTGQQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 270
>ref|XP_007203764.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
gi|462399295|gb|EMJ04963.1| hypothetical protein
PRUPE_ppa003118mg [Prunus persica]
Length = 601
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P++PGMFPNMF GQ FG+L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 220 GQIPGTSPTIPGMFPNMFPLATGQQFGSLPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 279
>ref|XP_007203763.1| hypothetical protein PRUPE_ppa003118mg [Prunus persica]
gi|462399294|gb|EMJ04962.1| hypothetical protein
PRUPE_ppa003118mg [Prunus persica]
Length = 539
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/60 (66%), Positives = 46/60 (76%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P++PGMFPNMF GQ FG+L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 220 GQIPGTSPTIPGMFPNMFPLATGQQFGSLPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 279
>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GTTP++PGMFP MF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 209 GQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 268
>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
sativus]
Length = 587
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GTTP++PGMFP MF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 209 GQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 268
>ref|XP_007009946.1| Splicing factor U2af large subunit A isoform 4 [Theobroma cacao]
gi|508726859|gb|EOY18756.1| Splicing factor U2af large
subunit A isoform 4 [Theobroma cacao]
Length = 596
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P++PG+FPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 190 GQIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 249
>ref|XP_007009945.1| Splicing factor U2af large subunit A isoform 3 [Theobroma cacao]
gi|508726858|gb|EOY18755.1| Splicing factor U2af large
subunit A isoform 3 [Theobroma cacao]
Length = 569
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P++PG+FPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 190 GQIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 249
>ref|XP_007009944.1| Splicing factor U2af large subunit A isoform 2 [Theobroma cacao]
gi|508726857|gb|EOY18754.1| Splicing factor U2af large
subunit A isoform 2 [Theobroma cacao]
Length = 529
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P++PG+FPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 190 GQIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 249
>ref|XP_007009943.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
gi|508726856|gb|EOY18753.1| Splicing factor U2af large
subunit A isoform 1 [Theobroma cacao]
Length = 591
Score = 82.8 bits (203), Expect = 5e-14
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P++PG+FPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 212 GQIPGTSPTLPGVFPNMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 271
>ref|XP_007046990.1| Splicing factor U2af large subunit A isoform 2 [Theobroma cacao]
gi|508699251|gb|EOX91147.1| Splicing factor U2af large
subunit A isoform 2 [Theobroma cacao]
Length = 585
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT P++PG+FPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 206 GQIPGTNPALPGVFPNMFPLATGQQFGALPVMPIQAMTQQATRHARRVYVGGLPPTANEQ 265
>ref|XP_006466765.1| PREDICTED: splicing factor U2af large subunit B-like isoform X3
[Citrus sinensis] gi|568824768|ref|XP_006466766.1|
PREDICTED: splicing factor U2af large subunit B-like
isoform X4 [Citrus sinensis]
Length = 394
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/60 (65%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ G P++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 15 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 74
>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
[Citrus sinensis]
Length = 581
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/60 (65%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ G P++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 202 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 261
>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
factor U2af large subunit B-like isoform X1 [Citrus
sinensis] gi|557527704|gb|ESR38954.1| hypothetical
protein CICLE_v10025221mg [Citrus clementina]
Length = 593
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/60 (65%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ G P++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 214 GQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 273
>ref|XP_006346938.1| PREDICTED: splicing factor U2af large subunit B-like isoform X1
[Solanum tuberosum]
Length = 561
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT+P +PGM PNMF T GQ FG L +MP QQATRHARRVYVGGLP +NEQ
Sbjct: 182 GQVPGTSPVIPGMLPNMFPLTSGQQFGALPVMPIQAMTQQATRHARRVYVGGLPATSNEQ 241
>ref|XP_004300618.1| PREDICTED: splicing factor U2af large subunit B-like [Fragaria
vesca subsp. vesca]
Length = 590
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ G TP++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 201 GQMPGATPTIPGMFPNMFPLATGQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 259
>ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
gi|550338812|gb|ERP61027.1| hypothetical protein
POPTR_0005s12700g [Populus trichocarpa]
Length = 588
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/60 (66%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GTTP +PGMFPNMF Q FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 206 GQIAGTTPPIPGMFPNMFPLGTSQ-FGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 264
>ref|XP_007046989.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
gi|508699250|gb|EOX91146.1| Splicing factor U2af large
subunit A isoform 1 [Theobroma cacao]
Length = 584
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/60 (65%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GT P++PG+FPNMF GQ FG L +MP QQATRHARRVYVGGLPP NEQ
Sbjct: 206 GQIPGTNPALPGVFPNMFPLATGQ-FGALPVMPIQAMTQQATRHARRVYVGGLPPTANEQ 264
>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
vinifera]
Length = 568
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GTTP++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGL P NEQ
Sbjct: 190 GQIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 248
>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GTTP++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGL P NEQ
Sbjct: 15 GQIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 73
>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
Length = 565
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/60 (66%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Frame = +1
Query: 226 GQLIGTTPSMPGMFPNMFSSTPGQTFGTLAIMP----PQQATRHARRVYVGGLPPATNEQ 393
GQ+ GTTP++PGMFPNMF GQ FG L +MP QQATRHARRVYVGGL P NEQ
Sbjct: 187 GQIPGTTPTIPGMFPNMFPLASGQ-FGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 245