BLASTX nr result
ID: Cocculus23_contig00004680
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00004680 (3039 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002462037.1| hypothetical protein SORBIDRAFT_02g013132 [S... 47 1e-06 ref|XP_004304221.1| PREDICTED: uncharacterized FCP1 homology dom... 41 7e-06 >ref|XP_002462037.1| hypothetical protein SORBIDRAFT_02g013132 [Sorghum bicolor] gi|241925414|gb|EER98558.1| hypothetical protein SORBIDRAFT_02g013132 [Sorghum bicolor] Length = 306 Score = 46.6 bits (109), Expect(3) = 1e-06 Identities = 16/27 (59%), Positives = 22/27 (81%) Frame = +1 Query: 1945 LVFKRPHCDSFFQLCFEKFNVGVWSSR 2025 LVF+RP+CD F + CF+ F +G+WSSR Sbjct: 108 LVFRRPYCDDFLRFCFQNFELGIWSSR 134 Score = 31.6 bits (70), Expect(3) = 1e-06 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = +1 Query: 2305 SLTLLLDDSPYKALLNP 2355 S TLL+DDSPYKAL NP Sbjct: 204 SNTLLVDDSPYKALCNP 220 Score = 23.1 bits (48), Expect(3) = 1e-06 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 2135 DILFVDLKQNPLFIWLCHFLTL 2200 DIL DLKQ LF W + T+ Sbjct: 144 DILMRDLKQYLLFCWDMSYCTV 165 >ref|XP_004304221.1| PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c-like [Fragaria vesca subsp. vesca] Length = 366 Score = 41.2 bits (95), Expect(3) = 7e-06 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +1 Query: 1948 VFKRPHCDSFFQLCFEKFNVGVWSSR 2025 +FKRP+ F + CFE+F VGVWSSR Sbjct: 169 IFKRPYYLDFLKFCFERFEVGVWSSR 194 Score = 34.7 bits (78), Expect(3) = 7e-06 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = +1 Query: 2305 SLTLLLDDSPYKALLNP 2355 S TLLLDDSPYKALLNP Sbjct: 264 SNTLLLDDSPYKALLNP 280 Score = 22.7 bits (47), Expect(3) = 7e-06 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +2 Query: 2135 DILFVDLKQNPLFIW-LCHFLTLLS*CGFQYIE 2230 D L DLK N LF W L H T GF+ +E Sbjct: 204 DYLMGDLKHNLLFCWDLSHCTT----TGFRTLE 232