BLASTX nr result

ID: Cocculus23_contig00004680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00004680
         (3039 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462037.1| hypothetical protein SORBIDRAFT_02g013132 [S...    47   1e-06
ref|XP_004304221.1| PREDICTED: uncharacterized FCP1 homology dom...    41   7e-06

>ref|XP_002462037.1| hypothetical protein SORBIDRAFT_02g013132 [Sorghum bicolor]
            gi|241925414|gb|EER98558.1| hypothetical protein
            SORBIDRAFT_02g013132 [Sorghum bicolor]
          Length = 306

 Score = 46.6 bits (109), Expect(3) = 1e-06
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +1

Query: 1945 LVFKRPHCDSFFQLCFEKFNVGVWSSR 2025
            LVF+RP+CD F + CF+ F +G+WSSR
Sbjct: 108  LVFRRPYCDDFLRFCFQNFELGIWSSR 134



 Score = 31.6 bits (70), Expect(3) = 1e-06
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +1

Query: 2305 SLTLLLDDSPYKALLNP 2355
            S TLL+DDSPYKAL NP
Sbjct: 204  SNTLLVDDSPYKALCNP 220



 Score = 23.1 bits (48), Expect(3) = 1e-06
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 2135 DILFVDLKQNPLFIWLCHFLTL 2200
            DIL  DLKQ  LF W   + T+
Sbjct: 144  DILMRDLKQYLLFCWDMSYCTV 165


>ref|XP_004304221.1| PREDICTED: uncharacterized FCP1 homology domain-containing protein
            C1271.03c-like [Fragaria vesca subsp. vesca]
          Length = 366

 Score = 41.2 bits (95), Expect(3) = 7e-06
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 1948 VFKRPHCDSFFQLCFEKFNVGVWSSR 2025
            +FKRP+   F + CFE+F VGVWSSR
Sbjct: 169  IFKRPYYLDFLKFCFERFEVGVWSSR 194



 Score = 34.7 bits (78), Expect(3) = 7e-06
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +1

Query: 2305 SLTLLLDDSPYKALLNP 2355
            S TLLLDDSPYKALLNP
Sbjct: 264  SNTLLLDDSPYKALLNP 280



 Score = 22.7 bits (47), Expect(3) = 7e-06
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 2135 DILFVDLKQNPLFIW-LCHFLTLLS*CGFQYIE 2230
            D L  DLK N LF W L H  T     GF+ +E
Sbjct: 204  DYLMGDLKHNLLFCWDLSHCTT----TGFRTLE 232


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