BLASTX nr result
ID: Cocculus23_contig00004414
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00004414
(265 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 144 1e-32
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 144 1e-32
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 141 1e-31
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 141 1e-31
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 140 1e-31
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 140 2e-31
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 139 4e-31
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 139 4e-31
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 137 1e-30
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza] 137 2e-30
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 137 2e-30
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 136 3e-30
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 136 3e-30
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 135 6e-30
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 135 8e-30
ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 134 1e-29
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 134 1e-29
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana... 134 1e-29
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 134 2e-29
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 133 2e-29
>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
Length = 1109
Score = 144 bits (363), Expect = 1e-32
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK +PCFLNRQLITLLSTLGVKD++FEKKQ+E VDQLD IL DP++
Sbjct: 582 KYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLR 641
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGYKP+
Sbjct: 642 AQEALELMSPGENTNILKEMLMCGYKPD 669
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 144 bits (363), Expect = 1e-32
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK +PCFLNRQLITLLSTLGVKD++FEKKQ+E VDQLD IL DP++
Sbjct: 126 KYESENTNLDVLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLR 185
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGYKP+
Sbjct: 186 AQEALELMSPGENTNILKEMLMCGYKPD 213
>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
gi|482575337|gb|EOA39524.1| hypothetical protein
CARUB_v10008144mg [Capsella rubella]
Length = 1107
Score = 141 bits (355), Expect = 1e-31
Identities = 64/88 (72%), Positives = 79/88 (89%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
K+ S NT LDVL WSK QPC+LNRQ+ITLLSTLGVKDN+FEKKQ+EVVD+LD ILTDP++
Sbjct: 592 KFESGNTKLDVLAWSKYQPCYLNRQIITLLSTLGVKDNVFEKKQREVVDRLDAILTDPLE 651
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
AHEAL +M+PGEN N+L+++L CGYKP+
Sbjct: 652 AHEALGLMAPGENTNILKQLLLCGYKPD 679
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 141 bits (355), Expect = 1e-31
Identities = 67/88 (76%), Positives = 76/88 (86%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QPCFLNRQLITLLSTLGV D FEKKQ+EVVDQL+ +LTDP++
Sbjct: 588 KYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLE 647
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGYKP+
Sbjct: 648 AQEALELMSPGENTNILKEMLLCGYKPD 675
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 140 bits (354), Expect = 1e-31
Identities = 67/88 (76%), Positives = 77/88 (87%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QPCFLNRQLITLLSTLGV D+ FE+KQ+EVVDQL+ ILTDP+K
Sbjct: 588 KYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILTDPLK 647
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGY+P+
Sbjct: 648 AQEALELMSPGENTNILKEMLLCGYEPD 675
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 140 bits (353), Expect = 2e-31
Identities = 67/88 (76%), Positives = 76/88 (86%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QPCFLNRQLITLLSTLGV D FEKKQ+EVVDQL+ +LTDP++
Sbjct: 588 KYESENTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDYAFEKKQREVVDQLNALLTDPLE 647
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGYKP+
Sbjct: 648 AQEALELMSPGENTNILKEMLLCGYKPD 675
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 139 bits (350), Expect = 4e-31
Identities = 68/88 (77%), Positives = 74/88 (84%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QP FLNRQLITLLSTLGVKD++FEKKQ+ VDQLD IL DPV
Sbjct: 584 KYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVA 643
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN NVL+EML CGYKP+
Sbjct: 644 AQEALELMSPGENTNVLKEMLMCGYKPD 671
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 139 bits (350), Expect = 4e-31
Identities = 68/88 (77%), Positives = 74/88 (84%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QP FLNRQLITLLSTLGVKD++FEKKQ+ VDQLD IL DPV
Sbjct: 126 KYESDNTNLDVLAWSKYQPSFLNRQLITLLSTLGVKDHVFEKKQRAAVDQLDTILKDPVA 185
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN NVL+EML CGYKP+
Sbjct: 186 AQEALELMSPGENTNVLKEMLMCGYKPD 213
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 137 bits (346), Expect = 1e-30
Identities = 61/88 (69%), Positives = 78/88 (88%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
K+ S NT LDVL WSK QPC++NRQLITLLSTLG+KD++FEKKQ+EVVD+LD ILTDP++
Sbjct: 583 KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGIKDSVFEKKQREVVDRLDAILTDPLE 642
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
AHEAL +M+PGEN N+L+ ++ CGYKP+
Sbjct: 643 AHEALGLMAPGENTNILKALILCGYKPD 670
>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
Length = 1101
Score = 137 bits (345), Expect = 2e-30
Identities = 63/88 (71%), Positives = 76/88 (86%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QPCF+NRQ+ITLLSTLGV+D++FEKKQ+E V QLD IL DP+K
Sbjct: 588 KYQSDNTKLDVLSWSKYQPCFMNRQIITLLSTLGVRDHVFEKKQREAVAQLDDILVDPLK 647
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A +AL++MSPGEN N+L+EML CGYKP+
Sbjct: 648 AQDALDLMSPGENTNILKEMLKCGYKPD 675
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 137 bits (345), Expect = 2e-30
Identities = 63/88 (71%), Positives = 77/88 (87%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
K+ S NT LDVL WSK QPC+LNRQLITLLSTLGVKD +FEKKQ+EVVD+LD ILTDP++
Sbjct: 592 KFESKNTKLDVLAWSKYQPCYLNRQLITLLSTLGVKDYVFEKKQREVVDKLDAILTDPLE 651
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
AHEAL +M+PGEN +L+E++ CGYKP+
Sbjct: 652 AHEALGLMAPGENTKILKELILCGYKPD 679
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 136 bits (343), Expect = 3e-30
Identities = 61/88 (69%), Positives = 78/88 (88%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
K+ S NT LDVL WSK QPC++NRQLITLLSTLGVKD++F+KKQ+EVVD+LD ILTDP++
Sbjct: 593 KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVKDSVFKKKQREVVDRLDAILTDPLE 652
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
AHEAL +M+PGEN N+L+ ++ CGYKP+
Sbjct: 653 AHEALGLMAPGENTNILKALILCGYKPD 680
>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1107
Score = 136 bits (343), Expect = 3e-30
Identities = 61/88 (69%), Positives = 78/88 (88%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
K+ S NT LDVL WSK QPC++NRQLITLLSTLGV+D++FEKKQ+EVVD+LD ILTDP++
Sbjct: 593 KFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVEDSVFEKKQREVVDRLDAILTDPLE 652
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
AHEAL +M+PGEN N+L+ ++ CGYKP+
Sbjct: 653 AHEALGLMAPGENTNILKALILCGYKPD 680
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 135 bits (340), Expect = 6e-30
Identities = 65/88 (73%), Positives = 74/88 (84%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S T LDVL WSK QPCFLNRQLI+LLSTLG+ D IFEKKQ+E V QLD ILTDP+K
Sbjct: 599 KYESELTKLDVLAWSKYQPCFLNRQLISLLSTLGIWDEIFEKKQREAVRQLDAILTDPLK 658
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+E+L CGYKP+
Sbjct: 659 AQEALELMSPGENTNILKELLICGYKPD 686
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 135 bits (339), Expect = 8e-30
Identities = 65/88 (73%), Positives = 75/88 (85%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
K+ S NT LDVL SK QPCFLNRQLITL+STLGV+D IFEKKQ E V+QLD ILTDP+K
Sbjct: 593 KFESDNTKLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLK 652
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGY+P+
Sbjct: 653 AQEALELMSPGENTNILKEMLKCGYQPD 680
>ref|XP_006477872.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1082
Score = 134 bits (337), Expect = 1e-29
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S +T LD+L SK QPCFLNRQLITLLSTLG++D++FEKKQ+E V QLD ILTDP+K
Sbjct: 568 KYKSESTSLDILANSKYQPCFLNRQLITLLSTLGIRDHVFEKKQREGVAQLDAILTDPLK 627
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
AHEALE+MS GEN NVL+E+L CGYKP+
Sbjct: 628 AHEALELMSSGENTNVLKELLMCGYKPD 655
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 134 bits (337), Expect = 1e-29
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S+N LDVL WSK QPC+LNRQL+TLLSTLGVKD++FE+KQ E VDQLD IL D +K
Sbjct: 584 KYESNNIKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDTLK 643
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGY P+
Sbjct: 644 AQEALELMSPGENTNILKEMLNCGYMPD 671
>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
Length = 1044
Score = 134 bits (337), Expect = 1e-29
Identities = 63/88 (71%), Positives = 74/88 (84%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S+N LDVL WSK QPC+LNRQL+TLLSTLGVKD++FE+KQ E VDQLD IL D +K
Sbjct: 577 KYESNNIKLDVLGWSKYQPCYLNRQLVTLLSTLGVKDDVFEQKQNEAVDQLDAILHDSLK 636
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+EML CGY P+
Sbjct: 637 AQEALELMSPGENTNILKEMLNCGYMPD 664
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 134 bits (336), Expect = 2e-29
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S N LDVL+WSK QPCFLNRQL+TLLSTLGVKD++ E+KQKE VDQLD IL D +K
Sbjct: 581 KYESDNNKLDVLEWSKYQPCFLNRQLVTLLSTLGVKDDVLEQKQKEAVDQLDAILHDSLK 640
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EALE+MSPGEN N+L+ ML CGY P+
Sbjct: 641 AQEALELMSPGENTNILKAMLNCGYMPD 668
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 133 bits (335), Expect = 2e-29
Identities = 61/88 (69%), Positives = 76/88 (86%)
Frame = -1
Query: 265 KYTSHNTGLDVLQWSKPQPCFLNRQLITLLSTLGVKDNIFEKKQKEVVDQLDMILTDPVK 86
KY S NT LDVL WSK QPCFLNRQ+ITLLSTLGVKD++FEK+Q+E V QLD +L DP++
Sbjct: 582 KYQSDNTKLDVLAWSKYQPCFLNRQIITLLSTLGVKDHVFEKRQREAVAQLDDVLIDPMR 641
Query: 85 AHEALEIMSPGENVNVLREMLTCGYKPN 2
A EAL++MSPGEN ++L+EML CGY+P+
Sbjct: 642 AQEALDLMSPGENTHILKEMLKCGYEPD 669