BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00004396
         (209 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567724.1| mediator of RNA polymerase II transcription sub...    59   9e-07
ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [A...    59   9e-07
ref|XP_006280722.1| hypothetical protein CARUB_v10026686mg [Caps...    59   9e-07
gb|AAF00542.1| fibrillarin homolog [Arabidopsis thaliana]              59   9e-07
gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsi...    59   9e-07
ref|NP_568772.3| probable mediator of RNA polymerase II transcri...    59   9e-07
gb|AFW63959.1| hypothetical protein ZEAMMB73_806586 [Zea mays]         59   9e-07
gb|AFW63956.1| hypothetical protein ZEAMMB73_806586 [Zea mays]         59   9e-07
gb|AFW63955.1| hypothetical protein ZEAMMB73_806586 [Zea mays]         59   9e-07
ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    59   9e-07
ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arab...    59   9e-07
ref|XP_002864176.1| hypothetical protein ARALYDRAFT_495317 [Arab...    59   9e-07
ref|NP_001148551.1| LOC100282167 [Zea mays] gi|195620340|gb|ACG3...    59   9e-07
gb|AAG21982.1| SKP1 interacting partner 7 [Arabidopsis thaliana]       59   9e-07
ref|XP_007200465.1| hypothetical protein PRUPE_ppa009013mg [Prun...    58   2e-06
ref|XP_007200358.1| hypothetical protein PRUPE_ppa010543mg [Prun...    58   2e-06
ref|XP_003592692.1| Fibrillarin [Medicago truncatula] gi|3583453...    58   2e-06
ref|XP_006655045.1| PREDICTED: mediator of RNA polymerase II tra...    57   2e-06
ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II tra...    57   2e-06
ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutr...    57   2e-06

>ref|NP_567724.1| mediator of RNA polymerase II transcription subunit 36a
           [Arabidopsis thaliana]
           gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           36a; AltName: Full=Fibrillarin-like protein 2; AltName:
           Full=Histone-glutamine methyltransferase; AltName:
           Full=rRNA 2'-O-methyltransferase fibrillarin 2
           gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
           [Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
           fibrillarin-like protein [Arabidopsis thaliana]
           gi|7269413|emb|CAB81373.1| fibrillarin-like protein
           [Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
           fibrillarin 2 [Arabidopsis thaliana]
           gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
           [Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
           fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
           gi|332659685|gb|AEE85085.1| mediator of RNA polymerase
           II transcription subunit 36a [Arabidopsis thaliana]
          Length = 320

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 286 FKPAEQVTLEPFERDHACVVGGYRMP 311


>ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [Amborella trichopoda]
           gi|548839426|gb|ERM99715.1| hypothetical protein
           AMTR_s00099p00093470 [Amborella trichopoda]
          Length = 245

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 213 FKPAEQVTLEPFERDHACVVGGYRMP 238


>ref|XP_006280722.1| hypothetical protein CARUB_v10026686mg [Capsella rubella]
           gi|482549426|gb|EOA13620.1| hypothetical protein
           CARUB_v10026686mg [Capsella rubella]
          Length = 353

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 320 FKPAEQVTLEPFERDHACVVGGYRMP 345


>gb|AAF00542.1| fibrillarin homolog [Arabidopsis thaliana]
          Length = 310

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 277 FKPAEQVTLEPFERDHACVVGGYRMP 302


>gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]
          Length = 320

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 286 FKPAEQVTLEPFERDHACVVGGYRMP 311


>ref|NP_568772.3| probable mediator of RNA polymerase II transcription subunit 36b
           [Arabidopsis thaliana]
           gi|67461076|sp|Q9FEF8.1|MD36B_ARATH RecName:
           Full=Probable mediator of RNA polymerase II
           transcription subunit 36b; AltName:
           Full=Histone-glutamine methyltransferase; AltName:
           Full=SKP1-interacting partner 7; AltName: Full=rRNA
           2'-O-methyltransferase fibrillarin 1
           gi|9965653|gb|AAG10103.1|AF233443_1 fibrillarin 1
           [Arabidopsis thaliana] gi|9965751|gb|AAG10152.1|
           fibrillarin 1 [Arabidopsis thaliana]
           gi|10177413|dbj|BAB10544.1| fibrillarin-like
           [Arabidopsis thaliana] gi|22654993|gb|AAM98088.1|
           AT5g52470/K24M7_22 [Arabidopsis thaliana]
           gi|28416513|gb|AAO42787.1| AT5g52470/K24M7_22
           [Arabidopsis thaliana] gi|110740295|dbj|BAF02044.1|
           fibrillarin homolog [Arabidopsis thaliana]
           gi|332008834|gb|AED96217.1| probable mediator of RNA
           polymerase II transcription subunit 36b [Arabidopsis
           thaliana]
          Length = 308

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 275 FKPAEQVTLEPFERDHACVVGGYRMP 300


>gb|AFW63959.1| hypothetical protein ZEAMMB73_806586 [Zea mays]
          Length = 305

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEP+ERDHACVVGGYRVP
Sbjct: 273 FKPAEQVTLEPYERDHACVVGGYRVP 298


>gb|AFW63956.1| hypothetical protein ZEAMMB73_806586 [Zea mays]
          Length = 245

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEP+ERDHACVVGGYRVP
Sbjct: 213 FKPAEQVTLEPYERDHACVVGGYRVP 238


>gb|AFW63955.1| hypothetical protein ZEAMMB73_806586 [Zea mays]
          Length = 121

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEP+ERDHACVVGGYRVP
Sbjct: 89  FKPAEQVTLEPYERDHACVVGGYRVP 114


>ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
           [Brachypodium distachyon]
          Length = 302

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKP+EQVTLEPFERDHACVVGGYRVP
Sbjct: 271 FKPSEQVTLEPFERDHACVVGGYRVP 296


>ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp.
           lyrata] gi|297315499|gb|EFH45922.1| hypothetical protein
           ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 283 FKPAEQVTLEPFERDHACVVGGYRMP 308


>ref|XP_002864176.1| hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp.
           lyrata] gi|297310011|gb|EFH40435.1| hypothetical protein
           ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata]
          Length = 307

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 274 FKPAEQVTLEPFERDHACVVGGYRMP 299


>ref|NP_001148551.1| LOC100282167 [Zea mays] gi|195620340|gb|ACG32000.1| fibrillarin-2
           [Zea mays] gi|413924026|gb|AFW63958.1| fibrillarin-2
           [Zea mays]
          Length = 308

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEP+ERDHACVVGGYRVP
Sbjct: 276 FKPAEQVTLEPYERDHACVVGGYRVP 301


>gb|AAG21982.1| SKP1 interacting partner 7 [Arabidopsis thaliana]
          Length = 100

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVGGYR+P
Sbjct: 67  FKPAEQVTLEPFERDHACVVGGYRMP 92


>ref|XP_007200465.1| hypothetical protein PRUPE_ppa009013mg [Prunus persica]
           gi|462395865|gb|EMJ01664.1| hypothetical protein
           PRUPE_ppa009013mg [Prunus persica]
          Length = 310

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKP EQVTLEPFERDHACVVGGYRVP
Sbjct: 278 FKPMEQVTLEPFERDHACVVGGYRVP 303


>ref|XP_007200358.1| hypothetical protein PRUPE_ppa010543mg [Prunus persica]
           gi|462395758|gb|EMJ01557.1| hypothetical protein
           PRUPE_ppa010543mg [Prunus persica]
          Length = 245

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKP EQVTLEPFERDHACVVGGYRVP
Sbjct: 213 FKPMEQVTLEPFERDHACVVGGYRVP 238


>ref|XP_003592692.1| Fibrillarin [Medicago truncatula] gi|358345300|ref|XP_003636719.1|
           Fibrillarin [Medicago truncatula]
           gi|355481740|gb|AES62943.1| Fibrillarin [Medicago
           truncatula] gi|355502654|gb|AES83857.1| Fibrillarin
           [Medicago truncatula] gi|388494564|gb|AFK35348.1|
           unknown [Medicago truncatula]
          Length = 313

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKP EQVTLEPFERDHACVVGGYRVP
Sbjct: 281 FKPMEQVTLEPFERDHACVVGGYRVP 306


>ref|XP_006655045.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Oryza brachyantha]
          Length = 278

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKP+EQVTLEPFERDHACVVGGYR+P
Sbjct: 246 FKPSEQVTLEPFERDHACVVGGYRMP 271


>ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Oryza brachyantha]
          Length = 308

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKP+EQVTLEPFERDHACVVGGYR+P
Sbjct: 276 FKPSEQVTLEPFERDHACVVGGYRMP 301


>ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutrema salsugineum]
           gi|557114458|gb|ESQ54741.1| hypothetical protein
           EUTSA_v10025746mg [Eutrema salsugineum]
          Length = 320

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 207 FKPAEQVTLEPFERDHACVVGGYRVP 130
           FKPAEQVTLEPFERDHACVVG YRVP
Sbjct: 286 FKPAEQVTLEPFERDHACVVGSYRVP 311