BLASTX nr result

ID: Cocculus23_contig00004296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00004296
         (378 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81847.1| hypothetical protein VITISV_036818 [Vitis vinifera]    63   5e-08
emb|CBI18097.3| unnamed protein product [Vitis vinifera]               62   8e-08
ref|XP_002264479.1| PREDICTED: patellin-6 [Vitis vinifera]             62   8e-08
ref|XP_002323032.2| SEC14 cytosolic factor family protein [Popul...    62   1e-07
ref|XP_004302562.1| PREDICTED: LOW QUALITY PROTEIN: patellin-6-l...    58   2e-06

>emb|CAN81847.1| hypothetical protein VITISV_036818 [Vitis vinifera]
          Length = 281

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
 Frame = +1

Query: 232 METSSPLSAQQTPK----EHPQTPYKKSFVASLMEAASFRSSSFKEDTYIVS 375
           ME SSP+S QQTP+    E    P++KSFV SLMEAA+ RS SFKEDTY VS
Sbjct: 1   MEASSPISMQQTPQQDQPEASSRPFRKSFVTSLMEAATLRSPSFKEDTYFVS 52


>emb|CBI18097.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
 Frame = +1

Query: 232 METSSPLSAQQTP-KEHPQT---PYKKSFVASLMEAASFRSSSFKEDTYIVS 375
           ME SSP+S QQTP K+ P+    P++K FV SLMEAA+ RS SFKEDTY VS
Sbjct: 33  MEASSPISMQQTPQKDQPEASPKPFRKRFVTSLMEAATLRSPSFKEDTYFVS 84


>ref|XP_002264479.1| PREDICTED: patellin-6 [Vitis vinifera]
          Length = 417

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
 Frame = +1

Query: 232 METSSPLSAQQTP-KEHPQT---PYKKSFVASLMEAASFRSSSFKEDTYIVS 375
           ME SSP+S QQTP K+ P+    P++K FV SLMEAA+ RS SFKEDTY VS
Sbjct: 1   MEASSPISMQQTPQKDQPEASPKPFRKRFVTSLMEAATLRSPSFKEDTYFVS 52


>ref|XP_002323032.2| SEC14 cytosolic factor family protein [Populus trichocarpa]
           gi|550321439|gb|EEF04793.2| SEC14 cytosolic factor
           family protein [Populus trichocarpa]
          Length = 424

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 6/55 (10%)
 Frame = +1

Query: 232 METSSPLSAQQTP------KEHPQTPYKKSFVASLMEAASFRSSSFKEDTYIVSN 378
           M+ SSP+S QQTP       E    PYKKSFV SLMEAA+ R+ SFKEDTY +S+
Sbjct: 1   MDASSPISLQQTPHQDYSVSEASPKPYKKSFVTSLMEAAALRTPSFKEDTYFISH 55


>ref|XP_004302562.1| PREDICTED: LOW QUALITY PROTEIN: patellin-6-like [Fragaria vesca
           subsp. vesca]
          Length = 413

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = +1

Query: 232 METSSPLSAQQTPKEHPQTPYKKSFVASLMEAASFRSSSFKEDTYIVS 375
           M++SSPL  QQTP   P+ P KKSFV+SLM  A+ R+ SFKEDTY VS
Sbjct: 1   MDSSSPLPLQQTPLASPK-PSKKSFVSSLMNVAALRTHSFKEDTYFVS 47


Top