BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00004219
         (495 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007139904.1| hypothetical protein PHAVU_008G068400g [Phas...   137   1e-30
ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like prote...   137   1e-30
ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   137   1e-30
gb|AFK41314.1| unknown [Lotus japonicus]                              137   1e-30
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...   137   1e-30
ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Me...   137   1e-30
ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycin...   137   1e-30
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   137   1e-30
ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, part...   136   3e-30
ref|XP_007033677.1| Small nuclear ribonucleoprotein family prote...   136   3e-30
ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citr...   136   3e-30
ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Popu...   136   3e-30
ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like prote...   136   3e-30
ref|XP_004249138.1| PREDICTED: U6 snRNA-associated Sm-like prote...   136   3e-30
gb|ABK26542.1| unknown [Picea sitchensis]                             136   3e-30
ref|XP_006846628.1| hypothetical protein AMTR_s00156p00050710 [A...   135   4e-30
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   135   6e-30
ref|NP_001131392.1| Small nuclear ribonucleoprotein F [Zea mays]...   135   6e-30
ref|XP_004952559.1| PREDICTED: U6 snRNA-associated Sm-like prote...   135   8e-30
dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Gro...   135   8e-30

>ref|XP_007139904.1| hypothetical protein PHAVU_008G068400g [Phaseolus vulgaris]
           gi|561013037|gb|ESW11898.1| hypothetical protein
           PHAVU_008G068400g [Phaseolus vulgaris]
          Length = 91

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 84  KRTLAEG 90


>ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform X1
           [Cicer arietinum] gi|502143790|ref|XP_004505466.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform X2 [Cicer arietinum]
          Length = 90

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 23  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 82

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 83  KRTLAEG 89


>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 84  KRTLAEG 90


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 23  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 82

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 83  KRTLAEG 89


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 84  KRTLAEG 90


>ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Medicago truncatula]
           gi|355508672|gb|AES89814.1| U6 snRNA-associated Sm-like
           protein LSm6 [Medicago truncatula]
           gi|388502230|gb|AFK39181.1| unknown [Medicago
           truncatula]
          Length = 91

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 84  KRTLAEG 90


>ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycine max]
           gi|255627589|gb|ACU14139.1| unknown [Glycine max]
          Length = 91

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 84  KRTLAEG 90


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  137 bits (346), Expect = 1e-30
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLAEG
Sbjct: 84  KRTLAEG 90


>ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, partial [Populus
           trichocarpa] gi|550332631|gb|EEE88636.2| hypothetical
           protein POPTR_0008s07780g, partial [Populus trichocarpa]
          Length = 134

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 67  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 126

Query: 315 KRTLAEG 295
           KRTLA+G
Sbjct: 127 KRTLADG 133


>ref|XP_007033677.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|590654371|ref|XP_007033678.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|590654375|ref|XP_007033679.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712706|gb|EOY04603.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712707|gb|EOY04604.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712708|gb|EOY04605.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 91

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLA+G
Sbjct: 84  KRTLADG 90


>ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citrus clementina]
           gi|568879626|ref|XP_006492754.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Citrus
           sinensis] gi|118483023|gb|ABK93423.1| unknown [Populus
           trichocarpa] gi|557544402|gb|ESR55380.1| hypothetical
           protein CICLE_v10023071mg [Citrus clementina]
          Length = 91

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLA+G
Sbjct: 84  KRTLADG 90


>ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Populus trichocarpa]
           gi|118482915|gb|ABK93371.1| unknown [Populus
           trichocarpa] gi|222865208|gb|EEF02339.1| hypothetical
           protein POPTR_0010s18590g [Populus trichocarpa]
          Length = 91

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTLA+G
Sbjct: 84  KRTLADG 90


>ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Solanum
           tuberosum]
          Length = 91

 Score =  136 bits (342), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTL EG
Sbjct: 84  KRTLGEG 90


>ref|XP_004249138.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform 1
           [Solanum lycopersicum] gi|460407397|ref|XP_004249139.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform 2 [Solanum lycopersicum]
          Length = 90

 Score =  136 bits (342), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 23  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 82

Query: 315 KRTLAEG 295
           KRTL EG
Sbjct: 83  KRTLGEG 89


>gb|ABK26542.1| unknown [Picea sitchensis]
          Length = 91

 Score =  136 bits (342), Expect = 3e-30
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 83

Query: 315 KRTLAEG 295
           KRTL EG
Sbjct: 84  KRTLGEG 90


>ref|XP_006846628.1| hypothetical protein AMTR_s00156p00050710 [Amborella trichopoda]
           gi|548849480|gb|ERN08303.1| hypothetical protein
           AMTR_s00156p00050710 [Amborella trichopoda]
          Length = 107

 Score =  135 bits (341), Expect = 4e-30
 Identities = 66/67 (98%), Positives = 66/67 (98%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 40  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 99

Query: 315 KRTLAEG 295
           KRTL EG
Sbjct: 100 KRTLPEG 106


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  135 bits (340), Expect = 6e-30
 Identities = 65/67 (97%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYIST+
Sbjct: 24  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTT 83

Query: 315 KRTLAEG 295
           KRTLA+G
Sbjct: 84  KRTLADG 90


>ref|NP_001131392.1| Small nuclear ribonucleoprotein F [Zea mays]
           gi|194691404|gb|ACF79786.1| unknown [Zea mays]
           gi|195605878|gb|ACG24769.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413918138|gb|AFW58070.1| Small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 95

 Score =  135 bits (340), Expect = 6e-30
 Identities = 65/67 (97%), Positives = 67/67 (100%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYIST+
Sbjct: 28  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTT 87

Query: 315 KRTLAEG 295
           KRTLA+G
Sbjct: 88  KRTLADG 94


>ref|XP_004952559.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Setaria
           italica]
          Length = 140

 Score =  135 bits (339), Expect = 8e-30
 Identities = 65/67 (97%), Positives = 66/67 (98%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 73  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 132

Query: 315 KRTLAEG 295
           KRTL +G
Sbjct: 133 KRTLTDG 139


>dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Group]
           gi|215765012|dbj|BAG86709.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222622927|gb|EEE57059.1| hypothetical protein
           OsJ_06869 [Oryza sativa Japonica Group]
          Length = 101

 Score =  135 bits (339), Expect = 8e-30
 Identities = 65/67 (97%), Positives = 66/67 (98%)
 Frame = -1

Query: 495 GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 316
           GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS
Sbjct: 34  GRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTS 93

Query: 315 KRTLAEG 295
           KRTL +G
Sbjct: 94  KRTLTDG 100