BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00004205
         (1672 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus not...   602   e-169
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa...   602   e-169
ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prun...   602   e-169
ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1...   601   e-169
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1...   597   e-168
ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phas...   597   e-168
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   595   e-167
ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citr...   593   e-167
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   593   e-167
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1...   592   e-166
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   592   e-166
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              591   e-166
ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [A...   591   e-166
ref|XP_007022303.1| RecA DNA recombination family protein isofor...   591   e-166
ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1...   590   e-166
ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG3...   589   e-165
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   587   e-165
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   584   e-164
ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1...   582   e-163
ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1...   581   e-163

>gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus notabilis]
          Length = 438

 Score =  602 bits (1552), Expect = e-169
 Identities = 323/436 (74%), Positives = 351/436 (80%), Gaps = 25/436 (5%)
 Frame = -1

Query: 1537 MDAVFP---LKTHFFHSKTHPSFVVPSLQFPLSRLRFSSKLNSKRSEA-------RCEF- 1391
            M+ +FP   L  HF  S +   F+ PSL  P S    +S L  +   +       RCEF 
Sbjct: 1    MELLFPPSKLTPHFRSSTSTTRFLPPSLYLPSSSSSSASSLRRRSVSSPSAIRRIRCEFD 60

Query: 1390 ---NGSLSGDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD 1220
               NG+L G+ D R +DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD
Sbjct: 61   AKINGALPGEFDPRFLDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD 120

Query: 1219 LALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGV 1040
            LALGGGLPRGRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGV
Sbjct: 121  LALGGGLPRGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGV 180

Query: 1039 DIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQAR 860
            D+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQAR
Sbjct: 181  DVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQAR 240

Query: 859  LMSQALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTG 680
            LMSQALRKMSGNASKA C LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTG
Sbjct: 241  LMSQALRKMSGNASKACCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTG 300

Query: 679  KIKSVKGDEDIG---------XXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCA 527
            KIKSVKGDE+IG                      RPYKQAEF+IIFGEGV+KLGCVLDCA
Sbjct: 301  KIKSVKGDEEIGLRVRVRIQKSKKGINKFPSQVSRPYKQAEFEIIFGEGVSKLGCVLDCA 360

Query: 526  ETMDIIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISH 347
            E MD+I KKGSWYSY D RLGQGRD+S+QYLRENP+L  EIEK+VRSK+A+GT Q G   
Sbjct: 361  EIMDVIAKKGSWYSYGDHRLGQGRDRSLQYLRENPLLLDEIEKIVRSKLAEGTGQTGFLQ 420

Query: 346  GQLTLL--QDEQVTDE 305
             +   L  +DE V +E
Sbjct: 421  PRSLSLPQEDEDVYEE 436


>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
            gi|550349661|gb|ERP67037.1| DNA repair protein recA
            [Populus trichocarpa]
          Length = 427

 Score =  602 bits (1551), Expect = e-169
 Identities = 317/424 (74%), Positives = 348/424 (82%), Gaps = 12/424 (2%)
 Frame = -1

Query: 1540 SMDAVFPLKT-HFFHSKTHPSFVVPSLQFPLSRLRFSSK----LNSKRSEARCEF----N 1388
            S+  + P+ T H F SK+ P      L F  SR+ F +     +  K  E RCEF    N
Sbjct: 3    SLAILKPITTIHHFPSKSTPFHPSLPLYFQFSRVCFKTSHFAAVKKKPKEIRCEFDSKVN 62

Query: 1387 GS-LSGDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 1211
            GS LS D+D R +D+QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD AL
Sbjct: 63   GSPLSSDLDARFLDKQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFAL 122

Query: 1210 GGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIE 1031
            GGGLP+GRIVEIFGPESSGKTTLALHAIAEVQK GG+AMLVDAEHAFDPAYS+ALGVD+E
Sbjct: 123  GGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVE 182

Query: 1030 NLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 851
            NLIVCQPDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMS
Sbjct: 183  NLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMS 242

Query: 850  QALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIK 671
            QALRKMSGNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIK
Sbjct: 243  QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIK 302

Query: 670  SVKGDEDIGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSW 491
            SVKGDED+G             RPYKQAEF+IIFGEGV++LGC+LDCAE MD++VKKGSW
Sbjct: 303  SVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSW 362

Query: 490  YSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGI--SHGQLTLLQDEQ 317
            YSY D RLGQGRDK++QYLR+NP L  EIEK VRS + DGT+  G   +      LQDE 
Sbjct: 363  YSYGDHRLGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDGTVNMGTPQARNMPVPLQDEN 422

Query: 316  VTDE 305
            V D+
Sbjct: 423  VYDD 426


>ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prunus persica]
            gi|462411678|gb|EMJ16727.1| hypothetical protein
            PRUPE_ppa007080mg [Prunus persica]
          Length = 383

 Score =  602 bits (1551), Expect = e-169
 Identities = 302/356 (84%), Positives = 322/356 (90%)
 Frame = -1

Query: 1414 RSEARCEFNGSLSGDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSG 1235
            R E + + NG+LS D D R IDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSG
Sbjct: 10   RCELQAKVNGALSADSDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSG 69

Query: 1234 CLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 1055
            CLTLDLALGGGLP+GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS
Sbjct: 70   CLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 129

Query: 1054 RALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQM 875
            +ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQM
Sbjct: 130  KALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQM 189

Query: 874  GLQARLMSQALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLE 695
            GLQARLMSQALRKMSGNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLE
Sbjct: 190  GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLE 249

Query: 694  IRSTGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMD 515
            IRSTGKIKSVKGDE+IG             RPYKQAEF+I+FGEGV KLGC+LDCAETMD
Sbjct: 250  IRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVGKLGCILDCAETMD 309

Query: 514  IIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISH 347
            ++VKKGSWYSY D RLGQGRDK++QYLRENP+L  EIEK+VRS + DGT Q G  H
Sbjct: 310  VVVKKGSWYSYGDHRLGQGRDKALQYLRENPLLLDEIEKIVRSMITDGTGQVGTLH 365


>ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Setaria italica]
          Length = 417

 Score =  601 bits (1549), Expect = e-169
 Identities = 304/404 (75%), Positives = 344/404 (85%), Gaps = 11/404 (2%)
 Frame = -1

Query: 1483 SFVVPSLQFPLSRLRFSSK-----LNSKRSEARCEF-----NGSLSGDMDQRLIDRQKAL 1334
            S + PS+   + R R + +     + ++    RCEF     NG+LSG+ D RL+DRQKAL
Sbjct: 13   SHLAPSISTRIRRRRPAPRASAGGVTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKAL 72

Query: 1333 EAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGPESSG 1154
            +AAM+DINNSFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLP+GR+VE++GPESSG
Sbjct: 73   DAAMSDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSG 132

Query: 1153 KTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADR 974
            KTTLALHAIAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADR
Sbjct: 133  KTTLALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADR 192

Query: 973  MCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCALIF 794
            MCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC L+F
Sbjct: 193  MCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMF 252

Query: 793  LNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXXXXX 614
            LNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS KGDED+G          
Sbjct: 253  LNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAKGDEDVGVKVRVRVQKS 312

Query: 613  XXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSIQYL 434
               RPYKQAEF+IIFGEGV+KLGCVLDCAE M+++ KKGSWYSY+D RLGQGR+K++QYL
Sbjct: 313  KVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDMRLGQGREKALQYL 372

Query: 433  RENPVLCSEIEKVVRSKVADGTIQAG-ISHGQLTLLQDEQVTDE 305
            RENP +C EIEKVVR+ + +GT     ++ GQ +L +D+QV DE
Sbjct: 373  RENPTICDEIEKVVRAMIPEGTRHMSLLAFGQSSLTEDDQVYDE 416


>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Citrus sinensis]
          Length = 440

 Score =  597 bits (1538), Expect = e-168
 Identities = 314/414 (75%), Positives = 350/414 (84%), Gaps = 14/414 (3%)
 Frame = -1

Query: 1504 FHSKTHPSFVVPS---LQFPLSRLRF---SSKLNSKRSEAR---CEFNGSLSG----DMD 1364
            F+ KTH   +  S   L    SR RF   SSKL++ R   +   CEF+G ++G      D
Sbjct: 26   FNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGD 85

Query: 1363 QRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRI 1184
             R +DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP+GRI
Sbjct: 86   SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145

Query: 1183 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 1004
            VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPDN
Sbjct: 146  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDN 205

Query: 1003 GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 824
            GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGN
Sbjct: 206  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265

Query: 823  ASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIG 644
            ASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED+G
Sbjct: 266  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325

Query: 643  XXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLG 464
                         RPYKQAEF+IIFGEGV+KLGC+LDCAE MDI+V+KG+WYSY DQRLG
Sbjct: 326  VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385

Query: 463  QGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISHGQLTL-LQDEQVTDE 305
            QGRDK++QYLR+NP+L  EIEKVVRS ++DG++  G     ++L  QDE + +E
Sbjct: 386  QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQDENILEE 439


>ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
            gi|561006319|gb|ESW05313.1| hypothetical protein
            PHAVU_011G169700g [Phaseolus vulgaris]
          Length = 415

 Score =  597 bits (1538), Expect = e-168
 Identities = 314/417 (75%), Positives = 345/417 (82%), Gaps = 6/417 (1%)
 Frame = -1

Query: 1537 MDAVFPLKTHFFHSKTHPSFVVPSLQFPLSRLRFSSKLNSKRSEARCEF----NGSLSGD 1370
            MD +FPLK H    K  P F   SL FPL  LRF +    K +  +CE     NG+LSGD
Sbjct: 1    MDLMFPLKPHSVILKA-PLF--SSLLFPLP-LRFRAVTAFKHANIQCELEGRPNGALSGD 56

Query: 1369 MDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 1190
             D R IDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+G
Sbjct: 57   FDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKG 116

Query: 1189 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 1010
            RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 117  RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 176

Query: 1009 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 830
            D+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMS
Sbjct: 177  DHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 236

Query: 829  GNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 650
            GNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLE+R  GKIKS KGDE+
Sbjct: 237  GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIKSAKGDEE 296

Query: 649  IGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQR 470
            IG             RPYK AEF+IIFGEG++KLGC+LDCAE  DI++KKGSWYSY D R
Sbjct: 297  IGLKVRLRVQKSKVSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSWYSYGDHR 356

Query: 469  LGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISH--GQLTLLQDEQVTDE 305
            LGQGRDK+IQYL+EN  L  EIEKVVRS + DG+ QA ++H      L +D+ + +E
Sbjct: 357  LGQGRDKAIQYLKENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHEDDDIFEE 413


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  595 bits (1535), Expect = e-167
 Identities = 311/411 (75%), Positives = 342/411 (83%), Gaps = 6/411 (1%)
 Frame = -1

Query: 1519 LKTHFFHSKTHPSFVVPSLQFPLSRLRFSSKLNSKRSEARCEF----NGSLSGDMDQRLI 1352
            L  H F  KT    ++PS  FP S L        ++   RCEF    NG+LS D D R +
Sbjct: 8    LNFHHFPLKT----LLPSA-FPSSSLPPHMGAKRQQMRLRCEFEVKVNGALSSDPDPRFL 62

Query: 1351 DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIF 1172
            DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+GRIVEI+
Sbjct: 63   DRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIY 122

Query: 1171 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMA 992
            GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD+GEMA
Sbjct: 123  GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMA 182

Query: 991  LETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 812
            LE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA
Sbjct: 183  LEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 242

Query: 811  GCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGXXXX 632
            GC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIR  GKIKS KGDEDIG    
Sbjct: 243  GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKSSKGDEDIGLRVR 302

Query: 631  XXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLGQGRD 452
                     RPYKQAEF+IIFGEGV+KLGC+LDCAE MD++VKKGSWYSY D RLGQGRD
Sbjct: 303  VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSYGDNRLGQGRD 362

Query: 451  KSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISHGQL--TLLQDEQVTDE 305
            +++QYLRENP++C EIEK+VR  +A+G  Q G  H +L  T  +DE + +E
Sbjct: 363  RALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEE 413


>ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citrus clementina]
            gi|557543284|gb|ESR54262.1| hypothetical protein
            CICLE_v10020181mg [Citrus clementina]
          Length = 440

 Score =  593 bits (1529), Expect = e-167
 Identities = 312/414 (75%), Positives = 350/414 (84%), Gaps = 14/414 (3%)
 Frame = -1

Query: 1504 FHSKTHPSFVVPS---LQFPLSRLRF---SSKLNSKRSEAR---CEFNGSLSG----DMD 1364
            F+ KTH   +  S   L    SR RF   SSKL++ R   +   CEF+G ++G      D
Sbjct: 26   FNMKTHLCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGD 85

Query: 1363 QRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRI 1184
             R +DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP+GRI
Sbjct: 86   SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145

Query: 1183 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 1004
            VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YS+ALGVD+ENLIVCQPDN
Sbjct: 146  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205

Query: 1003 GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 824
            GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGN
Sbjct: 206  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265

Query: 823  ASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIG 644
            ASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED+G
Sbjct: 266  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325

Query: 643  XXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLG 464
                         RPYKQAEF+IIFGEGV+KLGC+LDCAE MDI+V+KG+WYSY DQRLG
Sbjct: 326  VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385

Query: 463  QGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISHGQLTL-LQDEQVTDE 305
            QGRDK++QYLR+NP+L  EIEKVVRS ++DG++  G     ++L  Q+E + +E
Sbjct: 386  QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
            gi|241920620|gb|EER93764.1| hypothetical protein
            SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  593 bits (1529), Expect = e-167
 Identities = 302/400 (75%), Positives = 338/400 (84%), Gaps = 6/400 (1%)
 Frame = -1

Query: 1486 PSFVVPSLQFPLSRLRFSSKLNSKRSEARCEF-----NGSLSGDMDQRLIDRQKALEAAM 1322
            PSF   S +   +    +  L ++    RCEF     NG+LSG+ D RL+DRQKAL+AAM
Sbjct: 15   PSFPARSRRRRAAPRAAAGGLTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAM 74

Query: 1321 NDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTL 1142
            NDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLP+GR+VE++GPESSGKTTL
Sbjct: 75   NDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTL 134

Query: 1141 ALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRS 962
            ALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRS
Sbjct: 135  ALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRS 194

Query: 961  GAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCALIFLNQI 782
            GAIDLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC L+FLNQI
Sbjct: 195  GAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQI 254

Query: 781  RYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXXXXXXXXR 602
            RYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED+G             R
Sbjct: 255  RYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSR 314

Query: 601  PYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSIQYLRENP 422
            PYKQAEF+IIFGEGV+KLGCVLDCAE MD++ KKGSWYSY+D RLGQGR+K++QYLRE+P
Sbjct: 315  PYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESP 374

Query: 421  VLCSEIEKVVRSKVADGTIQAG-ISHGQLTLLQDEQVTDE 305
             +C EIEKVVR+ + +G+     ++ GQ +  +DEQV DE
Sbjct: 375  TICDEIEKVVRAMIPEGSRHMSLLAFGQTSSTEDEQVYDE 414


>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 418

 Score =  592 bits (1525), Expect = e-166
 Identities = 301/357 (84%), Positives = 321/357 (89%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1414 RSEARCEFNGSLS-GDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPS 1238
            RSE + + NG+LS  D D   +DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPS
Sbjct: 44   RSELQVKVNGALSTADSDSLFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPS 103

Query: 1237 GCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAY 1058
            GCLTLDLALGGGLP+GRIVEIFGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAY
Sbjct: 104  GCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAY 163

Query: 1057 SRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 878
            S+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ
Sbjct: 164  SKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 223

Query: 877  MGLQARLMSQALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRL 698
            MGLQARLMSQALRKMSGNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRL
Sbjct: 224  MGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRL 283

Query: 697  EIRSTGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETM 518
            EIRSTGKIKSVKGDE+IG             RPYKQAEF+I+FGEGV+KLGC+LDCAE M
Sbjct: 284  EIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVSKLGCILDCAEMM 343

Query: 517  DIIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISH 347
            D+IVKKGSWYSY D RLGQGRDKS+QYLRENPVL  EIEK+VRS + D T Q G  H
Sbjct: 344  DVIVKKGSWYSYGDHRLGQGRDKSLQYLRENPVLLDEIEKIVRSTMTDATGQVGSFH 400


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  592 bits (1525), Expect = e-166
 Identities = 312/417 (74%), Positives = 340/417 (81%), Gaps = 6/417 (1%)
 Frame = -1

Query: 1537 MDAVFPLKTHFFHSKTHPSFVVPSLQFPLSRLRFSSKLNSKRSEARCEF----NGSLSGD 1370
            MD +FPLK H    K   S    SL FP   LRF +    K +  +CE     NG+LSGD
Sbjct: 1    MDLMFPLKPHCVILKAPLS---SSLLFPFP-LRFRAVTAFKHANIQCELEGRPNGALSGD 56

Query: 1369 MDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 1190
             D R IDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+G
Sbjct: 57   FDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKG 116

Query: 1189 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 1010
            RI+EI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 117  RIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 176

Query: 1009 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 830
            D+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMS
Sbjct: 177  DHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 236

Query: 829  GNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 650
            GNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLE+R TGKIKS KGDE+
Sbjct: 237  GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAKGDEE 296

Query: 649  IGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQR 470
            IG             RPYK AEF+IIFGEG++KLGC+LDCAE  DI+ KKGSWYSY D R
Sbjct: 297  IGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHR 356

Query: 469  LGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAGISH--GQLTLLQDEQVTDE 305
            LGQGRDK+IQYL+EN  L  EIEKVVRS + DGT Q    H      L QD+ + +E
Sbjct: 357  LGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEE 413


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  591 bits (1524), Expect = e-166
 Identities = 302/382 (79%), Positives = 332/382 (86%), Gaps = 8/382 (2%)
 Frame = -1

Query: 1426 LNSKRSEAR--CEF----NGSLSGDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAG 1265
            + +KR + R  CEF    NG+LS D D R +DRQKALEAAMNDIN+SFGKGSVTRLGSAG
Sbjct: 1    MGAKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAG 60

Query: 1264 GALVETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVD 1085
            GALVETFPSGCLTLD ALGGGLP+GRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVD
Sbjct: 61   GALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVD 120

Query: 1084 AEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAE 905
            AEHAFDPAYS+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAE
Sbjct: 121  AEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAE 180

Query: 904  IEGEIGMQQMGLQARLMSQALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIA 725
            IEGEIGMQQMGLQARLMSQALRKMSGNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIA
Sbjct: 181  IEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIA 240

Query: 724  LKFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLG 545
            LKFFAS+RLEIR  GKIKS KGDEDIG             RPYKQAEF+IIFGEGV+KLG
Sbjct: 241  LKFFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLG 300

Query: 544  CVLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTI 365
            C+LDCAE MD++VKKGSWYSY D RLGQGRD+++QYLRENP++C EIEK+VR  +A+G  
Sbjct: 301  CILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIG 360

Query: 364  QAGISHGQL--TLLQDEQVTDE 305
            Q G  H +L  T  +DE + +E
Sbjct: 361  QLGAPHVRLSPTSPEDEDILEE 382


>ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [Amborella trichopoda]
            gi|548838911|gb|ERM99246.1| hypothetical protein
            AMTR_s00092p00136000 [Amborella trichopoda]
          Length = 406

 Score =  591 bits (1523), Expect = e-166
 Identities = 307/392 (78%), Positives = 331/392 (84%), Gaps = 3/392 (0%)
 Frame = -1

Query: 1537 MDAVFPLKTHFFHSKTHPSFVVPSLQFPL--SRLRFSSKLNSK-RSEARCEFNGSLSGDM 1367
            MD + P K + F          P  +FPL  S LRF   L  + R +A  + NG+L  D 
Sbjct: 1    MDCICPSKFYAF----------PVNKFPLVCSNLRFERILRVRFRCDAEAKGNGALFSDA 50

Query: 1366 DQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGR 1187
            D R +DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF SGCLTLDLALGGGLP+GR
Sbjct: 51   DSRSVDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFSSGCLTLDLALGGGLPKGR 110

Query: 1186 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPD 1007
            IVEI+GPESSGKTTLALHA+AEVQKLGGNAMLVDAEHAFDPAYSR+LGVD+ENLIVCQPD
Sbjct: 111  IVEIYGPESSGKTTLALHAMAEVQKLGGNAMLVDAEHAFDPAYSRSLGVDVENLIVCQPD 170

Query: 1006 NGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSG 827
            NGEMALETADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSG
Sbjct: 171  NGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSG 230

Query: 826  NASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDI 647
            NASKAGC LIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDEDI
Sbjct: 231  NASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDEDI 290

Query: 646  GXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRL 467
            G             RPYKQAEFDIIFGEGV  LGC+LDCAE MDI+ +KGSWYSY D RL
Sbjct: 291  GVKVRVRVQKSKVSRPYKQAEFDIIFGEGVGNLGCILDCAEMMDIVSRKGSWYSYSDLRL 350

Query: 466  GQGRDKSIQYLRENPVLCSEIEKVVRSKVADG 371
            GQGRDK++QYLRENP+LC+E+EK VRS ++DG
Sbjct: 351  GQGRDKALQYLRENPLLCTELEKGVRSAMSDG 382


>ref|XP_007022303.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
            gi|508721931|gb|EOY13828.1| RecA DNA recombination family
            protein isoform 1 [Theobroma cacao]
          Length = 485

 Score =  591 bits (1523), Expect = e-166
 Identities = 303/386 (78%), Positives = 332/386 (86%)
 Frame = -1

Query: 1522 PLKTHFFHSKTHPSFVVPSLQFPLSRLRFSSKLNSKRSEARCEFNGSLSGDMDQRLIDRQ 1343
            PL+ HF   +  P     S   PL+ ++   +L     E     NG+LS + D R +DRQ
Sbjct: 84   PLQNHF---RQRPPLT--SSHLPLAAVK--KRLRKVHCEFEPRVNGALSPNSDSRFLDRQ 136

Query: 1342 KALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGPE 1163
            KALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP+GRIVE++GPE
Sbjct: 137  KALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEVYGPE 196

Query: 1162 SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALET 983
            SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPDNGEMALE 
Sbjct: 197  SSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALEI 256

Query: 982  ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCA 803
            ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 
Sbjct: 257  ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCT 316

Query: 802  LIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXX 623
            LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIR +GKIKSVKGDEDIG       
Sbjct: 317  LIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPSGKIKSVKGDEDIGLRVRVRV 376

Query: 622  XXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSI 443
                  RPYKQAEF+IIFGEGV+KLGC+LDCAE MD++VKKGSWYSY + RLGQGRDK++
Sbjct: 377  QKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEMMDVVVKKGSWYSYGEHRLGQGRDKAL 436

Query: 442  QYLRENPVLCSEIEKVVRSKVADGTI 365
            QYLR+NPVL  EIEK+VRS +ADGT+
Sbjct: 437  QYLRDNPVLHGEIEKIVRSMMADGTL 462


>ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
            partial [Oryza brachyantha]
          Length = 371

 Score =  590 bits (1520), Expect = e-166
 Identities = 296/371 (79%), Positives = 329/371 (88%), Gaps = 6/371 (1%)
 Frame = -1

Query: 1399 CEF-----NGSLSGDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSG 1235
            CEF     NG+LSG+ D RLIDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSG
Sbjct: 1    CEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSG 60

Query: 1234 CLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 1055
            CLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS
Sbjct: 61   CLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 120

Query: 1054 RALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQM 875
            +ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQM
Sbjct: 121  KALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQM 180

Query: 874  GLQARLMSQALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLE 695
            GLQARLMSQALRKMSGNASKAGC L+FLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLE
Sbjct: 181  GLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLE 240

Query: 694  IRSTGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMD 515
            IR  GKIKS KGDED+G             RPYKQAEF+IIFGEGV+KLGCVLDCAE M+
Sbjct: 241  IRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELME 300

Query: 514  IIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGT-IQAGISHGQL 338
            ++ KKGSWYSY+D RLGQGR+K++QYLRE+P +C EIEK VR+ + +GT  ++ ++ GQ 
Sbjct: 301  VVAKKGSWYSYKDMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGTRHESLLAFGQS 360

Query: 337  TLLQDEQVTDE 305
            +L ++EQV DE
Sbjct: 361  SLTEEEQVYDE 371


>ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG32971.1| protein recA [Zea
            mays] gi|238008650|gb|ACR35360.1| unknown [Zea mays]
            gi|414871794|tpg|DAA50351.1| TPA: putative recA DNA
            recombination family protein isoform 1 [Zea mays]
            gi|414871795|tpg|DAA50352.1| TPA: putative recA DNA
            recombination family protein isoform 2 [Zea mays]
          Length = 415

 Score =  589 bits (1519), Expect = e-165
 Identities = 296/380 (77%), Positives = 328/380 (86%), Gaps = 6/380 (1%)
 Frame = -1

Query: 1426 LNSKRSEARCEF-----NGSLSGDMDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGG 1262
            L ++    RCEF     NG+LSG+ D RL+DRQK L+AAMNDINNSFGKGSVTRLGSAGG
Sbjct: 35   LTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKVLDAAMNDINNSFGKGSVTRLGSAGG 94

Query: 1261 ALVETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDA 1082
            A VETFPSGCLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDA
Sbjct: 95   AFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDA 154

Query: 1081 EHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEI 902
            EHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEI
Sbjct: 155  EHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEI 214

Query: 901  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIAL 722
            EGEIGMQQMGLQARLMSQALRKMSGNASKAGC L+FLNQIRYKIGVFYGNPEVTSGGIAL
Sbjct: 215  EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIAL 274

Query: 721  KFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGC 542
            KFFASVRLEIR  GKIKS KGDED+G             RPYKQAEF+IIFGEGV+KLGC
Sbjct: 275  KFFASVRLEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGC 334

Query: 541  VLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQ 362
            VLDCAE MD++ KKGSWYSY+D RLGQGR+K++QYLRE+P  C EIEKVVR+ + +G+  
Sbjct: 335  VLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIPEGSRH 394

Query: 361  AG-ISHGQLTLLQDEQVTDE 305
               ++ GQ +  +DEQ  DE
Sbjct: 395  MSLLAFGQSSSTEDEQAYDE 414


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
            gi|108710024|gb|ABF97819.1| DNA repair protein recA,
            chloroplast precursor, putative, expressed [Oryza sativa
            Japonica Group] gi|113549209|dbj|BAF12652.1| Os03g0639700
            [Oryza sativa Japonica Group]
            gi|215704578|dbj|BAG94211.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 418

 Score =  587 bits (1514), Expect = e-165
 Identities = 301/405 (74%), Positives = 338/405 (83%), Gaps = 16/405 (3%)
 Frame = -1

Query: 1471 PSLQFPLSRLRFSSKLNSKRSEA----------RCEF-----NGSLSGDMDQRLIDRQKA 1337
            P+   P SR +  +   S R+ A          RCEF     NG+LSG+ D RLIDRQKA
Sbjct: 14   PAHLLPRSRRKGRAPAPSARATACGAVGRGRRLRCEFVAGGGNGALSGEDDPRLIDRQKA 73

Query: 1336 LEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGPESS 1157
            L+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLP+GR+VE++GPESS
Sbjct: 74   LDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESS 133

Query: 1156 GKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETAD 977
            GKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE AD
Sbjct: 134  GKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIAD 193

Query: 976  RMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCALI 797
            RMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC L+
Sbjct: 194  RMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLM 253

Query: 796  FLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXXXX 617
            FLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED+G         
Sbjct: 254  FLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQK 313

Query: 616  XXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSIQY 437
                RPYKQAEF+IIFGEGV+KLGCVLDCAE M+++ KKGSWYSY++ RLGQGR+K++QY
Sbjct: 314  SKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMRLGQGREKALQY 373

Query: 436  LRENPVLCSEIEKVVRSKVADGTIQAG-ISHGQLTLLQDEQVTDE 305
            LRE+P +C EIEK VR+ + +G      ++ G+ +L ++EQV DE
Sbjct: 374  LRESPTICDEIEKAVRAMIPEGARHMSLLAFGRSSLTEEEQVDDE 418


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  584 bits (1505), Expect = e-164
 Identities = 300/399 (75%), Positives = 339/399 (84%), Gaps = 8/399 (2%)
 Frame = -1

Query: 1477 VVPSLQFPLSRLRFSSKLNSKRSEA-RCEF-----NGSLSGDMDQRLIDRQKALEAAMND 1316
            V+P  +  +S  R S+   + R    RCEF     NG+LSG+ D RLIDRQKAL+AAMND
Sbjct: 14   VLPRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMND 73

Query: 1315 INNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLAL 1136
            INNSFGKGSVTRLGSAGGA VETFPSGCLTLD ALGGGLP+GR+VE++GPESSGKTTLAL
Sbjct: 74   INNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLAL 133

Query: 1135 HAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGA 956
            HAIAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGA
Sbjct: 134  HAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGA 193

Query: 955  IDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCALIFLNQIRY 776
            IDLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC L+FLNQIRY
Sbjct: 194  IDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRY 253

Query: 775  KIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDIGXXXXXXXXXXXXXRPY 596
            KIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS KGDED+G             RPY
Sbjct: 254  KIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVGVKVRVRVQKSKVSRPY 313

Query: 595  KQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQRLGQGRDKSIQYLRENPVL 416
            KQAEF+I+FGEGV+KLGC+LDCAE M+++ KKGSWYSY+D RLGQGR+K++QYLRE+P +
Sbjct: 314  KQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLGQGREKALQYLRESPTI 373

Query: 415  CSEIEKVVRSKVADGTIQAG-ISHGQLTL-LQDEQVTDE 305
            C EIEKVVR+ + +GT     ++ GQ +   ++E+V DE
Sbjct: 374  CDEIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 412


>ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum tuberosum]
          Length = 419

 Score =  582 bits (1501), Expect = e-163
 Identities = 301/417 (72%), Positives = 345/417 (82%), Gaps = 7/417 (1%)
 Frame = -1

Query: 1537 MDAVFPLKTHFFHSKT--HPSFVVPSLQF--PLSRLRFSSKLNSKRSEARCEFNGSLSGD 1370
            M+  FP+K  FF SK          S++F   +SR +F ++    RSE   + NG+ S D
Sbjct: 1    MELTFPVKAQFFGSKIGYKSQSYSTSVKFYQKVSRPQFPARGIRVRSEFDHKINGTFSPD 60

Query: 1369 MDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 1190
             D R +DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG+P+G
Sbjct: 61   SDARFLDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKG 120

Query: 1189 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 1010
            RIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 121  RIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 180

Query: 1009 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 830
            DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
Sbjct: 181  DNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 240

Query: 829  GNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 650
            GNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKS KGDE+
Sbjct: 241  GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAKGDEE 300

Query: 649  IGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQR 470
            +G             RPYKQAEF+I+FGEGV+KLGCVLDCAE ++++ KKGSWY+Y + R
Sbjct: 301  VGIKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAELIEVVAKKGSWYNYGEHR 360

Query: 469  LGQGRDKSIQYLRENPVLCSEIEKVVRSKVADGTIQAG---ISHGQLTLLQDEQVTD 308
            LGQGR+K++QYLRENP+L  EIEK+VRS V + T   G   + H    LL+++ + +
Sbjct: 361  LGQGREKALQYLRENPLLSEEIEKMVRSSVLETTGFLGSSSLKHPLPQLLEEDALQE 417


>ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum lycopersicum]
          Length = 419

 Score =  581 bits (1497), Expect = e-163
 Identities = 298/392 (76%), Positives = 336/392 (85%), Gaps = 4/392 (1%)
 Frame = -1

Query: 1537 MDAVFPLKTHFFHSKT-HPSFVVP-SLQF--PLSRLRFSSKLNSKRSEARCEFNGSLSGD 1370
            M+  FP+K   F SK  H S     S++F   +SR +FS+     RSE   + NG+ S D
Sbjct: 1    MELTFPVKAQLFGSKIGHKSLSYSTSVKFYQKVSRPQFSACGIRVRSEFDHKINGAFSPD 60

Query: 1369 MDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 1190
             D R++DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG+P+G
Sbjct: 61   SDARILDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKG 120

Query: 1189 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 1010
            RIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 121  RIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 180

Query: 1009 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 830
            DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS
Sbjct: 181  DNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 240

Query: 829  GNASKAGCALIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDED 650
            GNASKAGC LIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKS KGDE+
Sbjct: 241  GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAKGDEE 300

Query: 649  IGXXXXXXXXXXXXXRPYKQAEFDIIFGEGVNKLGCVLDCAETMDIIVKKGSWYSYEDQR 470
            +G             RPYKQAEF+I+FGEGV+KLGCVLDCAE ++++ KKGSWY+Y + R
Sbjct: 301  VGIKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAELIEVVAKKGSWYNYGEHR 360

Query: 469  LGQGRDKSIQYLRENPVLCSEIEKVVRSKVAD 374
            LGQGR+K++QYLRENP+L  EIEK+VRS V +
Sbjct: 361  LGQGREKALQYLRENPLLSEEIEKMVRSSVLE 392