BLASTX nr result
ID: Cocculus23_contig00004012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00004012
(1293 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera] 366 1e-98
ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chlorop... 359 1e-96
ref|XP_007205651.1| hypothetical protein PRUPE_ppa009351mg [Prun... 350 1e-93
ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobrom... 347 6e-93
gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis] 347 8e-93
ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial ... 347 8e-93
ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial ... 347 8e-93
ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus ... 340 1e-90
ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Popu... 339 1e-90
ref|NP_001030985.1| 50S ribosomal protein L4 [Arabidopsis thalia... 337 5e-90
ref|XP_004294262.1| PREDICTED: 50S ribosomal protein L4, chlorop... 337 5e-90
ref|NP_849604.1| 50S ribosomal protein L4 [Arabidopsis thaliana]... 337 5e-90
ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]... 337 5e-90
ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chlorop... 337 7e-90
gb|AAM61637.1| ribosomal protein L4 [Arabidopsis thaliana] 337 9e-90
ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chlorop... 337 9e-90
sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, ch... 336 1e-89
ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arab... 336 1e-89
ref|XP_006417815.1| hypothetical protein EUTSA_v10008395mg [Eutr... 335 2e-89
ref|XP_006417814.1| hypothetical protein EUTSA_v10008395mg [Eutr... 335 2e-89
>emb|CAN78612.1| hypothetical protein VITISV_028922 [Vitis vinifera]
Length = 306
Score = 366 bits (940), Expect = 1e-98
Identities = 189/247 (76%), Positives = 207/247 (83%), Gaps = 4/247 (1%)
Frame = -2
Query: 1181 QNPKSIISTTP----KLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDL 1014
QNP + + P K LKPLS +RS+ +PILSF+G+KVGET L+L
Sbjct: 24 QNPNFLSTFKPNSFLKPLKPLS-------------VRSDLVAIPILSFTGEKVGETQLNL 70
Query: 1013 KSAPPETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTP 834
KSAP +TARAVVHRGIITD QN+RRGTASTLTRGEVRGGG KPY QKKTG+ARRGSQRTP
Sbjct: 71 KSAPLDTARAVVHRGIITDLQNRRRGTASTLTRGEVRGGGKKPYPQKKTGRARRGSQRTP 130
Query: 833 LRPGGGVIFGPKPRDWSIKINRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIA 654
LRPGGGV+FGPKPRDWSIKINRKEKRLAISTA+SSA VN IVVEDFS+ FDKPKTKEFI+
Sbjct: 131 LRPGGGVVFGPKPRDWSIKINRKEKRLAISTAMSSAAVNTIVVEDFSDKFDKPKTKEFIS 190
Query: 653 AMKRWGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAV 474
AMKRWG+DP EKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILN+DKLV T+ V
Sbjct: 191 AMKRWGIDPKEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNSDKLVLTQETV 250
Query: 473 DYLKTMY 453
DYL MY
Sbjct: 251 DYLNRMY 257
>ref|XP_004143147.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Cucumis
sativus] gi|449496602|ref|XP_004160176.1| PREDICTED: 50S
ribosomal protein L4, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 359 bits (922), Expect = 1e-96
Identities = 183/244 (75%), Positives = 203/244 (83%)
Frame = -2
Query: 1181 QNPKSIISTTPKLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAP 1002
QN ++ P LKP + + S I SE ATLP+LSF+G KVGET LDLKSAP
Sbjct: 25 QNLNLFFNSKPNSLKPQTKTLS---------ISSELATLPVLSFTGQKVGETYLDLKSAP 75
Query: 1001 PETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPG 822
PETARAVVHR IITDQQNKRRGTASTLTR EV GGG KPY QKKTG+ARRGS RTPLRPG
Sbjct: 76 PETARAVVHRAIITDQQNKRRGTASTLTRAEVSGGGKKPYKQKKTGRARRGSMRTPLRPG 135
Query: 821 GGVIFGPKPRDWSIKINRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKR 642
GGV+FGPKPRDWSIKINRKEK+LAISTA++SA VN IVVE+F + F+KPKTKEFIAA+KR
Sbjct: 136 GGVVFGPKPRDWSIKINRKEKKLAISTAVASAAVNTIVVEEFGDKFEKPKTKEFIAALKR 195
Query: 641 WGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLK 462
WG+DP EKS+FLMTEVSDNVRLSSRNIGTLK+LTPRTLNLFDIL++DKLV T AVDYL
Sbjct: 196 WGIDPKEKSLFLMTEVSDNVRLSSRNIGTLKLLTPRTLNLFDILDSDKLVLTPTAVDYLN 255
Query: 461 TMYG 450
YG
Sbjct: 256 ERYG 259
>ref|XP_007205651.1| hypothetical protein PRUPE_ppa009351mg [Prunus persica]
gi|462401293|gb|EMJ06850.1| hypothetical protein
PRUPE_ppa009351mg [Prunus persica]
Length = 296
Score = 350 bits (897), Expect = 1e-93
Identities = 178/224 (79%), Positives = 193/224 (86%), Gaps = 3/224 (1%)
Frame = -2
Query: 1112 NPNFAQP---LIRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITDQQNKR 942
N +F P I SE ATLP+LSF+GDKVGET LDLK+A P+TARAVVHR IITD QNKR
Sbjct: 33 NNSFKTPKPLTISSELATLPVLSFTGDKVGETFLDLKAALPDTARAVVHRAIITDLQNKR 92
Query: 941 RGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIKINRKE 762
RGTASTLTR EVRGGG KPY QKKTG+AR+GS RTPLRPGGGV+FGPKPRDWSIKINRKE
Sbjct: 93 RGTASTLTRAEVRGGGRKPYPQKKTGRARQGSTRTPLRPGGGVVFGPKPRDWSIKINRKE 152
Query: 761 KRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFLMTEVSDNV 582
KRLAISTA++SA N IVVEDFS+ F+KPKTKEFIAAMKRWGLDP EK+ FLM EV+DNV
Sbjct: 153 KRLAISTAVASAAENTIVVEDFSDEFEKPKTKEFIAAMKRWGLDPNEKTTFLMREVADNV 212
Query: 581 RLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
RLSSRNIGTLKMLTPRTLNLFDILNADKL+ T VDYL YG
Sbjct: 213 RLSSRNIGTLKMLTPRTLNLFDILNADKLILTPEIVDYLNARYG 256
>ref|XP_007016159.1| 50S ribosomal protein L4 isoform 1 [Theobroma cacao]
gi|508786522|gb|EOY33778.1| 50S ribosomal protein L4
isoform 1 [Theobroma cacao]
Length = 303
Score = 347 bits (890), Expect = 6e-93
Identities = 179/243 (73%), Positives = 199/243 (81%), Gaps = 3/243 (1%)
Frame = -2
Query: 1169 SIISTTPKLLKP---LSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAPP 999
S+ ++P P LS SSNPN I S+ +TL ILSF+G+K+GET LDLKSAPP
Sbjct: 17 SLFLSSPSTKLPCLSLSFKTSSNPNLC---IASQLSTLSILSFTGEKIGETYLDLKSAPP 73
Query: 998 ETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGG 819
ETARAVVHR IITDQQNKRRGTASTLTR EVRGGG KPY QKKTG+ARRGS R+PLRPGG
Sbjct: 74 ETARAVVHRAIITDQQNKRRGTASTLTRSEVRGGGKKPYPQKKTGRARRGSMRSPLRPGG 133
Query: 818 GVIFGPKPRDWSIKINRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKRW 639
GVIFGPKPRDWSIKIN+KEKRLAISTALSSA N IVVE+F + F+KPKTK+F+ A+KRW
Sbjct: 134 GVIFGPKPRDWSIKINKKEKRLAISTALSSAAQNTIVVEEFGDKFEKPKTKDFMEALKRW 193
Query: 638 GLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKT 459
GLDP +KSMFLM EV +NV LSSRNIGTL+MLTPRTLNLFDILN D LV T AVDYL
Sbjct: 194 GLDPKQKSMFLMMEVPENVNLSSRNIGTLRMLTPRTLNLFDILNCDNLVLTPDAVDYLNG 253
Query: 458 MYG 450
YG
Sbjct: 254 RYG 256
>gb|EXC01483.1| 50S ribosomal protein L4 [Morus notabilis]
Length = 293
Score = 347 bits (889), Expect = 8e-93
Identities = 181/244 (74%), Positives = 201/244 (82%)
Frame = -2
Query: 1181 QNPKSIISTTPKLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAP 1002
+ P S+ S TPK PLS I SE ATLP+LSF+G+KVGET LDLKSAP
Sbjct: 37 KTPNSLKSPTPK---PLS-------------IISELATLPVLSFTGEKVGETFLDLKSAP 80
Query: 1001 PETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPG 822
PETARAVVHRGIITD QNKRRGTASTLTRGEVRGGG KPY QKKTG+AR GS R+PLRPG
Sbjct: 81 PETARAVVHRGIITDLQNKRRGTASTLTRGEVRGGGRKPYPQKKTGRARSGSIRSPLRPG 140
Query: 821 GGVIFGPKPRDWSIKINRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKR 642
GGV+FGPKPRDWSIKINRKEKRLAISTA++SA VN IVVEDF + F++PKTKEFIAA+KR
Sbjct: 141 GGVVFGPKPRDWSIKINRKEKRLAISTAVASAAVNTIVVEDFGDKFERPKTKEFIAALKR 200
Query: 641 WGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLK 462
WG+DP EKS FLM +V++N+ LSSRNIGTLK+LTPRTLNLFDILNADKLV T AV YL
Sbjct: 201 WGIDPKEKSTFLMMDVTENLVLSSRNIGTLKILTPRTLNLFDILNADKLVLTPGAVYYLN 260
Query: 461 TMYG 450
YG
Sbjct: 261 ERYG 264
>ref|XP_007016161.1| 50S ribosomal protein L4 isoform 3, partial [Theobroma cacao]
gi|508786524|gb|EOY33780.1| 50S ribosomal protein L4
isoform 3, partial [Theobroma cacao]
Length = 269
Score = 347 bits (889), Expect = 8e-93
Identities = 176/228 (77%), Positives = 193/228 (84%)
Frame = -2
Query: 1133 LSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITDQ 954
LS SSNPN I S+ +TL ILSF+G+K+GET LDLKSAPPETARAVVHR IITDQ
Sbjct: 15 LSFKTSSNPNLC---IASQLSTLSILSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQ 71
Query: 953 QNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIKI 774
QNKRRGTASTLTR EVRGGG KPY QKKTG+ARRGS R+PLRPGGGVIFGPKPRDWSIKI
Sbjct: 72 QNKRRGTASTLTRSEVRGGGKKPYPQKKTGRARRGSMRSPLRPGGGVIFGPKPRDWSIKI 131
Query: 773 NRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFLMTEV 594
N+KEKRLAISTALSSA N IVVE+F + F+KPKTK+F+ A+KRWGLDP +KSMFLM EV
Sbjct: 132 NKKEKRLAISTALSSAAQNTIVVEEFGDKFEKPKTKDFMEALKRWGLDPKQKSMFLMMEV 191
Query: 593 SDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
+NV LSSRNIGTL+MLTPRTLNLFDILN D LV T AVDYL YG
Sbjct: 192 PENVNLSSRNIGTLRMLTPRTLNLFDILNCDNLVLTPDAVDYLNGRYG 239
>ref|XP_007016160.1| 50S ribosomal protein L4 isoform 2, partial [Theobroma cacao]
gi|508786523|gb|EOY33779.1| 50S ribosomal protein L4
isoform 2, partial [Theobroma cacao]
Length = 271
Score = 347 bits (889), Expect = 8e-93
Identities = 176/228 (77%), Positives = 193/228 (84%)
Frame = -2
Query: 1133 LSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITDQ 954
LS SSNPN I S+ +TL ILSF+G+K+GET LDLKSAPPETARAVVHR IITDQ
Sbjct: 15 LSFKTSSNPNLC---IASQLSTLSILSFTGEKIGETYLDLKSAPPETARAVVHRAIITDQ 71
Query: 953 QNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIKI 774
QNKRRGTASTLTR EVRGGG KPY QKKTG+ARRGS R+PLRPGGGVIFGPKPRDWSIKI
Sbjct: 72 QNKRRGTASTLTRSEVRGGGKKPYPQKKTGRARRGSMRSPLRPGGGVIFGPKPRDWSIKI 131
Query: 773 NRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFLMTEV 594
N+KEKRLAISTALSSA N IVVE+F + F+KPKTK+F+ A+KRWGLDP +KSMFLM EV
Sbjct: 132 NKKEKRLAISTALSSAAQNTIVVEEFGDKFEKPKTKDFMEALKRWGLDPKQKSMFLMMEV 191
Query: 593 SDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
+NV LSSRNIGTL+MLTPRTLNLFDILN D LV T AVDYL YG
Sbjct: 192 PENVNLSSRNIGTLRMLTPRTLNLFDILNCDNLVLTPDAVDYLNGRYG 239
>ref|XP_002525600.1| 50S ribosomal protein L4, putative [Ricinus communis]
gi|223535036|gb|EEF36718.1| 50S ribosomal protein L4,
putative [Ricinus communis]
Length = 283
Score = 340 bits (871), Expect = 1e-90
Identities = 174/241 (72%), Positives = 198/241 (82%), Gaps = 1/241 (0%)
Frame = -2
Query: 1169 SIISTTPKLLKPLSHSQSSNPNFAQPL-IRSEFATLPILSFSGDKVGETDLDLKSAPPET 993
S + TTPK + + PN + L I + +TLPILSF+G+K+GET LDLK+APP+T
Sbjct: 19 SSLFTTPKFQSFSKPNSLNPPNSSLSLSISCQVSTLPILSFTGEKIGETYLDLKTAPPDT 78
Query: 992 ARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGV 813
ARAVVHR IITDQQNKRRGTASTLTR EVRGGG KPY QKKTG+ARRGS RTPLRPGGGV
Sbjct: 79 ARAVVHRAIITDQQNKRRGTASTLTRAEVRGGGKKPYQQKKTGRARRGSSRTPLRPGGGV 138
Query: 812 IFGPKPRDWSIKINRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMKRWGL 633
IFGPKPRDWSIKIN+KEKRLAISTAL SA + + VE+F + F+KPKTK+FI AMKRWGL
Sbjct: 139 IFGPKPRDWSIKINKKEKRLAISTALCSATESMLCVEEFGDKFEKPKTKDFIEAMKRWGL 198
Query: 632 DPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMY 453
DP EK MFLM +V+D+V LSSRNIGTL+MLTPRTLNLFDILN+DKLV T AVDYL Y
Sbjct: 199 DPKEKVMFLMMDVADSVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDAVDYLNGRY 258
Query: 452 G 450
G
Sbjct: 259 G 259
>ref|XP_002309469.2| hypothetical protein POPTR_0006s23770g [Populus trichocarpa]
gi|550336953|gb|EEE92992.2| hypothetical protein
POPTR_0006s23770g [Populus trichocarpa]
Length = 290
Score = 339 bits (870), Expect = 1e-90
Identities = 176/243 (72%), Positives = 199/243 (81%), Gaps = 5/243 (2%)
Frame = -2
Query: 1163 ISTTPKLLKPLSHSQSSNPNFAQPL--IRSEFATLPILSFSGDKVGETDLDLKSAPPETA 990
+S++ + L+ ++ P ++ I + ATLPILSF+G+K+GET LDLKSAPPETA
Sbjct: 16 LSSSHNKIPKLTSLSTTKPQYSLKSLSISCQVATLPILSFTGEKIGETYLDLKSAPPETA 75
Query: 989 RAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVI 810
RAVVHRGIITDQQNKRRGTASTLTRGEVRGGG KPY QKKTG+ARRGS R+PLRPGGGVI
Sbjct: 76 RAVVHRGIITDQQNKRRGTASTLTRGEVRGGGRKPYPQKKTGRARRGSMRSPLRPGGGVI 135
Query: 809 FGPKPRDWSIKINRKEKRLAISTALSSA---MVNAIVVEDFSENFDKPKTKEFIAAMKRW 639
FGPKPRDWSIKINRKEKRLA+STALSSA + I VE+F + F+KPKTKEFI AM RW
Sbjct: 136 FGPKPRDWSIKINRKEKRLAMSTALSSAASESESVICVEEFGDKFEKPKTKEFIEAMNRW 195
Query: 638 GLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKT 459
GLDP EK MFLM +VSDNV LSSRNIGTL+MLTPRTLNLFDILN+DKLV T VDYL
Sbjct: 196 GLDPKEKVMFLMMDVSDNVGLSSRNIGTLRMLTPRTLNLFDILNSDKLVLTPDTVDYLNG 255
Query: 458 MYG 450
YG
Sbjct: 256 RYG 258
>ref|NP_001030985.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|79317147|ref|NP_001030986.1| 50S ribosomal protein L4
[Arabidopsis thaliana]
gi|8778555|gb|AAF79563.1|AC022464_21 F22G5.34
[Arabidopsis thaliana] gi|222423413|dbj|BAH19678.1|
AT1G07320 [Arabidopsis thaliana]
gi|332189987|gb|AEE28108.1| 50S ribosomal protein L4
[Arabidopsis thaliana] gi|332189988|gb|AEE28109.1| 50S
ribosomal protein L4 [Arabidopsis thaliana]
Length = 278
Score = 337 bits (865), Expect = 5e-90
Identities = 171/232 (73%), Positives = 198/232 (85%), Gaps = 4/232 (1%)
Frame = -2
Query: 1133 LSHSQSSNPNFAQPL-IRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITD 957
+S S+ + ++PL + S+ ATLPILSF G+KVGET LDLK+AP +TARAVVHR I+TD
Sbjct: 31 ISVSKLGSGRVSKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTD 90
Query: 956 QQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIK 777
NKRRGTASTLTRGEVRGGG+KPYSQKKTG ARRGSQRTPLRPGGGV+FGP+P+DWSIK
Sbjct: 91 LNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIK 150
Query: 776 INRKEKRLAISTALSSAMV---NAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFL 606
INRKEK+LAISTALSSA AIVVE+F E F+KPKTK+F+AAM+RWGLDP EK+MFL
Sbjct: 151 INRKEKKLAISTALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFL 210
Query: 605 MTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
M +V +NV SSRNIGTL+MLTPRTLNLFDILNADKLV T AAV++L YG
Sbjct: 211 MIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYG 262
>ref|XP_004294262.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 284
Score = 337 bits (865), Expect = 5e-90
Identities = 177/236 (75%), Positives = 198/236 (83%), Gaps = 6/236 (2%)
Frame = -2
Query: 1139 KPLSHS--QSSNPNFAQPL-IRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRG 969
KPLS + +S++ +PL + +E ATLP+LSF+GDKVGET LDLKSA P+TARAVVHR
Sbjct: 22 KPLSFATLRSNSLKSPKPLTLTAELATLPVLSFTGDKVGETFLDLKSALPDTARAVVHRA 81
Query: 968 IITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRD 789
II D QNKRRGTASTLTRGEVRGGG KPY QKKTG+AR+GS RTPLRPGGGV+FGPKPRD
Sbjct: 82 IIHDLQNKRRGTASTLTRGEVRGGGRKPYPQKKTGRARQGSTRTPLRPGGGVVFGPKPRD 141
Query: 788 WSIKINRKEKRLAISTALSSAMVNAIVVEDFSENF---DKPKTKEFIAAMKRWGLDPTEK 618
WSIKINRKEKRLAISTA++SA N IVVEDFS+ F +KPKT EFIAAMKRWGLDP EK
Sbjct: 142 WSIKINRKEKRLAISTAVASAADNTIVVEDFSDEFEKLEKPKTTEFIAAMKRWGLDPKEK 201
Query: 617 SMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
+ F M EV+D V+LSSRNIGTLKMLTPRTLNLFDILNADKL+ T VDYL YG
Sbjct: 202 TTFFMLEVADKVKLSSRNIGTLKMLTPRTLNLFDILNADKLILTPETVDYLNGRYG 257
>ref|NP_849604.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|332189986|gb|AEE28107.1| 50S ribosomal protein L4
[Arabidopsis thaliana]
Length = 280
Score = 337 bits (865), Expect = 5e-90
Identities = 171/232 (73%), Positives = 198/232 (85%), Gaps = 4/232 (1%)
Frame = -2
Query: 1133 LSHSQSSNPNFAQPL-IRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITD 957
+S S+ + ++PL + S+ ATLPILSF G+KVGET LDLK+AP +TARAVVHR I+TD
Sbjct: 31 ISVSKLGSGRVSKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTD 90
Query: 956 QQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIK 777
NKRRGTASTLTRGEVRGGG+KPYSQKKTG ARRGSQRTPLRPGGGV+FGP+P+DWSIK
Sbjct: 91 LNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIK 150
Query: 776 INRKEKRLAISTALSSAMV---NAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFL 606
INRKEK+LAISTALSSA AIVVE+F E F+KPKTK+F+AAM+RWGLDP EK+MFL
Sbjct: 151 INRKEKKLAISTALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFL 210
Query: 605 MTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
M +V +NV SSRNIGTL+MLTPRTLNLFDILNADKLV T AAV++L YG
Sbjct: 211 MIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYG 262
>ref|NP_563786.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
gi|21542429|sp|O50061.2|RK4_ARATH RecName: Full=50S
ribosomal protein L4, chloroplastic; AltName: Full=CL4;
AltName: Full=R-protein L4; Flags: Precursor
gi|17380866|gb|AAL36245.1| unknown protein [Arabidopsis
thaliana] gi|21436209|gb|AAM51392.1| unknown protein
[Arabidopsis thaliana] gi|110741117|dbj|BAE98652.1|
hypothetical protein [Arabidopsis thaliana]
gi|332189985|gb|AEE28106.1| 50S ribosomal protein L4
[Arabidopsis thaliana]
Length = 282
Score = 337 bits (865), Expect = 5e-90
Identities = 171/232 (73%), Positives = 198/232 (85%), Gaps = 4/232 (1%)
Frame = -2
Query: 1133 LSHSQSSNPNFAQPL-IRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITD 957
+S S+ + ++PL + S+ ATLPILSF G+KVGET LDLK+AP +TARAVVHR I+TD
Sbjct: 31 ISVSKLGSGRVSKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTD 90
Query: 956 QQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIK 777
NKRRGTASTLTRGEVRGGG+KPYSQKKTG ARRGSQRTPLRPGGGV+FGP+P+DWSIK
Sbjct: 91 LNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIK 150
Query: 776 INRKEKRLAISTALSSAMV---NAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFL 606
INRKEK+LAISTALSSA AIVVE+F E F+KPKTK+F+AAM+RWGLDP EK+MFL
Sbjct: 151 INRKEKKLAISTALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFL 210
Query: 605 MTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
M +V +NV SSRNIGTL+MLTPRTLNLFDILNADKLV T AAV++L YG
Sbjct: 211 MIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYG 262
>ref|XP_003521064.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform 1
[Glycine max]
Length = 310
Score = 337 bits (864), Expect = 7e-90
Identities = 172/231 (74%), Positives = 196/231 (84%), Gaps = 1/231 (0%)
Frame = -2
Query: 1139 KPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIIT 960
KPLS S ++P LP+L+FSG++VGE+ LDL+SAPP+TARAVVHR ++T
Sbjct: 50 KPLSISCKASP------------PLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVT 97
Query: 959 DQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSI 780
D QNKRRGTASTLTRGEVRGGG KP+ QKKTG+ARRGS RTPLRPGGGVIFGPKPRDWSI
Sbjct: 98 DLQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVIFGPKPRDWSI 157
Query: 779 KINRKEKRLAISTALSSAMVNAIVVEDFSENF-DKPKTKEFIAAMKRWGLDPTEKSMFLM 603
KINRKEKRLAISTA++SA +A+VVEDF+ F +KPKTKEFIAAMKRWGLDP EK+MFLM
Sbjct: 158 KINRKEKRLAISTAVASAAASAVVVEDFAAEFAEKPKTKEFIAAMKRWGLDPKEKAMFLM 217
Query: 602 TEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
TEV +NVRLSSRNIGTLKM TPRTLNL+DIL+ADKLV T+ AVDYL YG
Sbjct: 218 TEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYG 268
>gb|AAM61637.1| ribosomal protein L4 [Arabidopsis thaliana]
Length = 282
Score = 337 bits (863), Expect = 9e-90
Identities = 171/232 (73%), Positives = 197/232 (84%), Gaps = 4/232 (1%)
Frame = -2
Query: 1133 LSHSQSSNPNFAQPL-IRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIITD 957
+S S+ + ++PL + S+ ATLPILSF G+KVGET LDLK+AP +TARAVVHR I+TD
Sbjct: 31 ISVSKLGSGRVSKPLSVSSQLATLPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTD 90
Query: 956 QQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSIK 777
NKRRGTASTLTRGEVRGGG+KPYSQKKTG ARRGSQRTPLRPGGGV+FGP+P+DWSIK
Sbjct: 91 LNNKRRGTASTLTRGEVRGGGIKPYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIK 150
Query: 776 INRKEKRLAISTALSSAMV---NAIVVEDFSENFDKPKTKEFIAAMKRWGLDPTEKSMFL 606
INRKEK+LAISTALSSA AIVVE+F E F+KPKTK+F+AAM+RWGLDP EK MFL
Sbjct: 151 INRKEKKLAISTALSSAASAEGGAIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKPMFL 210
Query: 605 MTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
M +V +NV SSRNIGTL+MLTPRTLNLFDILNADKLV T AAV++L YG
Sbjct: 211 MIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNADKLVLTPAAVEFLNARYG 262
>ref|XP_006583522.1| PREDICTED: 50S ribosomal protein L4, chloroplastic-like isoform X1
[Glycine max] gi|571465968|ref|XP_006583523.1| PREDICTED:
50S ribosomal protein L4, chloroplastic-like isoform X2
[Glycine max]
Length = 303
Score = 337 bits (863), Expect = 9e-90
Identities = 171/231 (74%), Positives = 196/231 (84%), Gaps = 1/231 (0%)
Frame = -2
Query: 1139 KPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSAPPETARAVVHRGIIT 960
KPLS S ++P LP+L+FSG++VGE+ LDL+SAPP+TARAVVHR ++T
Sbjct: 45 KPLSISCKASP------------PLPVLNFSGERVGESFLDLRSAPPDTARAVVHRAVVT 92
Query: 959 DQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRPGGGVIFGPKPRDWSI 780
D QNKRRGTASTLTRGEVRGGG KP+ QKKTG+ARRGS RTPLRPGGGV+FGPKPRDWSI
Sbjct: 93 DLQNKRRGTASTLTRGEVRGGGRKPFPQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSI 152
Query: 779 KINRKEKRLAISTALSSAMVNAIVVEDFSENF-DKPKTKEFIAAMKRWGLDPTEKSMFLM 603
KINRKEKRLAISTA++SA +A+VVEDF+ F +KPKTKEFIAAMKRWGLDP EK+MFLM
Sbjct: 153 KINRKEKRLAISTAVASAAASAVVVEDFATEFAEKPKTKEFIAAMKRWGLDPKEKAMFLM 212
Query: 602 TEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYLKTMYG 450
TEV +NVRLSSRNIGTLKM TPRTLNL+DIL+ADKLV T+ AVDYL YG
Sbjct: 213 TEVPENVRLSSRNIGTLKMHTPRTLNLYDILDADKLVLTQGAVDYLNQRYG 263
>sp|O80361.1|RK4_TOBAC RecName: Full=50S ribosomal protein L4, chloroplastic; AltName:
Full=CL4; AltName: Full=R-protein L4; Flags: Precursor
gi|3298439|dbj|BAA31510.1| chloroplast ribosomal protein
L4 [Nicotiana tabacum]
Length = 282
Score = 336 bits (862), Expect = 1e-89
Identities = 170/245 (69%), Positives = 201/245 (82%)
Frame = -2
Query: 1184 LQNPKSIISTTPKLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDLKSA 1005
+Q+ K ++ +PK L A IRSE AT+PILSF G +VG T L+LKSA
Sbjct: 19 IQSSKHLLFRSPKQLSVA----------AIATIRSEVATIPILSFDGAEVGSTTLNLKSA 68
Query: 1004 PPETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTPLRP 825
P +TARAVVHRG+ TD +N+RRGTASTLTR EVRGGG+KPY QKKTG+ARRGS RTPLRP
Sbjct: 69 PLDTARAVVHRGLTTDLRNQRRGTASTLTRSEVRGGGIKPYPQKKTGRARRGSNRTPLRP 128
Query: 824 GGGVIFGPKPRDWSIKINRKEKRLAISTALSSAMVNAIVVEDFSENFDKPKTKEFIAAMK 645
GGGV+FGPKP+DWS+KIN+KEKRLAISTALSSA N IVVE+F++ F+KPKTKEFI M+
Sbjct: 129 GGGVVFGPKPKDWSVKINKKEKRLAISTALSSASENTIVVEEFNDKFEKPKTKEFIDLMR 188
Query: 644 RWGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRAAVDYL 465
RWGLDP EKS+FLMT+VSDNV LSSRNIGTLKMLTPRTLNLFDIL+++KLV T++AVD+L
Sbjct: 189 RWGLDPKEKSLFLMTDVSDNVILSSRNIGTLKMLTPRTLNLFDILDSEKLVLTKSAVDFL 248
Query: 464 KTMYG 450
YG
Sbjct: 249 NERYG 253
>ref|XP_002889640.1| hypothetical protein ARALYDRAFT_470751 [Arabidopsis lyrata subsp.
lyrata] gi|297335482|gb|EFH65899.1| hypothetical protein
ARALYDRAFT_470751 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 336 bits (862), Expect = 1e-89
Identities = 174/251 (69%), Positives = 203/251 (80%), Gaps = 7/251 (2%)
Frame = -2
Query: 1181 QNPKSIISTTP----KLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDL 1014
Q PK+ IS ++ KPLS + S+ ATLPI+SF G+KVGET LDL
Sbjct: 25 QIPKTYISVAKFGSGRVSKPLS-------------VASQLATLPIISFEGEKVGETYLDL 71
Query: 1013 KSAPPETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTP 834
K+AP +TARAVVHR I+TD QNKRRGTASTLTRGEVRGGG+KPY+QKKTG ARRGSQRTP
Sbjct: 72 KTAPEDTARAVVHRAIVTDLQNKRRGTASTLTRGEVRGGGIKPYAQKKTGHARRGSQRTP 131
Query: 833 LRPGGGVIFGPKPRDWSIKINRKEKRLAISTALSSAMV---NAIVVEDFSENFDKPKTKE 663
LRPGGGV+FGP+P+DWSIKINRKEK+LAISTALSSA+ AIVVE+F E F+KPKTK+
Sbjct: 132 LRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAVSAEGGAIVVEEFGEKFEKPKTKD 191
Query: 662 FIAAMKRWGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTR 483
F+AAM+RWGLDP EK+MFLM +V +NV SSRNIGTL+MLTPRTLNLFDILN+DKLV T
Sbjct: 192 FLAAMQRWGLDPKEKAMFLMIDVDENVAKSSRNIGTLRMLTPRTLNLFDILNSDKLVLTP 251
Query: 482 AAVDYLKTMYG 450
AAV++L YG
Sbjct: 252 AAVEFLNARYG 262
>ref|XP_006417815.1| hypothetical protein EUTSA_v10008395mg [Eutrema salsugineum]
gi|557095586|gb|ESQ36168.1| hypothetical protein
EUTSA_v10008395mg [Eutrema salsugineum]
Length = 286
Score = 335 bits (860), Expect = 2e-89
Identities = 173/250 (69%), Positives = 200/250 (80%), Gaps = 6/250 (2%)
Frame = -2
Query: 1181 QNPKSIISTTP----KLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDL 1014
Q PK+ IS ++ KPLS + S+ ATLPI+SF G+K+GET LDL
Sbjct: 25 QFPKTYISVAKLGSGRVSKPLS-------------VASQLATLPIISFEGEKIGETYLDL 71
Query: 1013 KSAPPETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTP 834
K+AP +TARAVVHR I+TD QNKRRGTASTLTRGEVRGGG+KPY+QKKTG ARRGSQRTP
Sbjct: 72 KTAPEDTARAVVHRAIVTDLQNKRRGTASTLTRGEVRGGGIKPYAQKKTGHARRGSQRTP 131
Query: 833 LRPGGGVIFGPKPRDWSIKINRKEKRLAISTALSSA--MVNAIVVEDFSENFDKPKTKEF 660
LRPGGG +FGPKPRDWSIKINRKEKRLAISTA+SSA AIVVE+F + F+KPKTK+F
Sbjct: 132 LRPGGGAVFGPKPRDWSIKINRKEKRLAISTAISSAASAEGAIVVEEFGDKFEKPKTKDF 191
Query: 659 IAAMKRWGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRA 480
+AAMKRWGLDP EK+MFLM +V +NV S RNIGTL+MLTPRTLNLFDILN+DKLV T A
Sbjct: 192 LAAMKRWGLDPKEKAMFLMMDVEENVAKSGRNIGTLRMLTPRTLNLFDILNSDKLVLTPA 251
Query: 479 AVDYLKTMYG 450
AV++L YG
Sbjct: 252 AVEFLNARYG 261
>ref|XP_006417814.1| hypothetical protein EUTSA_v10008395mg [Eutrema salsugineum]
gi|557095585|gb|ESQ36167.1| hypothetical protein
EUTSA_v10008395mg [Eutrema salsugineum]
Length = 284
Score = 335 bits (860), Expect = 2e-89
Identities = 173/250 (69%), Positives = 200/250 (80%), Gaps = 6/250 (2%)
Frame = -2
Query: 1181 QNPKSIISTTP----KLLKPLSHSQSSNPNFAQPLIRSEFATLPILSFSGDKVGETDLDL 1014
Q PK+ IS ++ KPLS + S+ ATLPI+SF G+K+GET LDL
Sbjct: 25 QFPKTYISVAKLGSGRVSKPLS-------------VASQLATLPIISFEGEKIGETYLDL 71
Query: 1013 KSAPPETARAVVHRGIITDQQNKRRGTASTLTRGEVRGGGVKPYSQKKTGKARRGSQRTP 834
K+AP +TARAVVHR I+TD QNKRRGTASTLTRGEVRGGG+KPY+QKKTG ARRGSQRTP
Sbjct: 72 KTAPEDTARAVVHRAIVTDLQNKRRGTASTLTRGEVRGGGIKPYAQKKTGHARRGSQRTP 131
Query: 833 LRPGGGVIFGPKPRDWSIKINRKEKRLAISTALSSA--MVNAIVVEDFSENFDKPKTKEF 660
LRPGGG +FGPKPRDWSIKINRKEKRLAISTA+SSA AIVVE+F + F+KPKTK+F
Sbjct: 132 LRPGGGAVFGPKPRDWSIKINRKEKRLAISTAISSAASAEGAIVVEEFGDKFEKPKTKDF 191
Query: 659 IAAMKRWGLDPTEKSMFLMTEVSDNVRLSSRNIGTLKMLTPRTLNLFDILNADKLVFTRA 480
+AAMKRWGLDP EK+MFLM +V +NV S RNIGTL+MLTPRTLNLFDILN+DKLV T A
Sbjct: 192 LAAMKRWGLDPKEKAMFLMMDVEENVAKSGRNIGTLRMLTPRTLNLFDILNSDKLVLTPA 251
Query: 479 AVDYLKTMYG 450
AV++L YG
Sbjct: 252 AVEFLNARYG 261