BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00003911
         (1376 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteo...   503   e-140
ref|XP_006576245.1| PREDICTED: uncharacterized protein LOC100809...   501   e-139
gb|EXC05639.1| ATP-dependent Clp protease proteolytic subunit-re...   495   e-137
ref|XP_007030998.1| ATP-dependent caseinolytic (Clp) protease/cr...   493   e-137
ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycin...   493   e-137
ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subun...   493   e-137
gb|EYU37284.1| hypothetical protein MIMGU_mgv1a010345mg [Mimulus...   492   e-136
ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteo...   492   e-136
ref|XP_004302392.1| PREDICTED: ATP-dependent Clp protease proteo...   492   e-136
ref|XP_007205539.1| hypothetical protein PRUPE_ppa008579mg [Prun...   488   e-135
ref|XP_007147022.1| hypothetical protein PHAVU_006G089800g [Phas...   486   e-134
ref|XP_006840521.1| hypothetical protein AMTR_s00045p00207040 [A...   483   e-134
ref|XP_002319519.1| ATP-dependent Clp protease proteolytic subun...   483   e-134
ref|XP_006344669.1| PREDICTED: ATP-dependent Clp protease proteo...   463   e-128
ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabido...   463   e-128
ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-...   463   e-128
ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subun...   463   e-128
dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis...   462   e-127
dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis...   461   e-127
ref|XP_004230237.1| PREDICTED: ATP-dependent Clp protease proteo...   459   e-126

>ref|XP_003554645.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic-like [Glycine max]
          Length = 327

 Score =  503 bits (1296), Expect = e-140
 Identities = 249/320 (77%), Positives = 285/320 (89%), Gaps = 2/320 (0%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVAAA 211
           MA++L++S+ +S  +   TRRR R +  S +       +PMPPLNP+DPFLSKLASVAA+
Sbjct: 9   MAAYLRVSMPTSPQSPTTTRRRCRNLKTSCSVNRPK--IPMPPLNPKDPFLSKLASVAAS 66

Query: 212 NPDLKLST--NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHGRI 385
           +P+  L+T  NSDT PYLD+FDSPKLMA+PAQVERSVSYNEHRPR+PPPDLPSLLLHGRI
Sbjct: 67  SPETLLNTPKNSDTLPYLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRI 126

Query: 386 VYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIYDA 565
           VYIGMPLVPAVTELV+AEL+YLQYMDPKEPIY+YINSTGTTRDDGETVGME+EGFAIYDA
Sbjct: 127 VYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDA 186

Query: 566 MMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDVLI 745
           MMQLKNEI TVAVG+AIGQACLLL+AG  G+RFMMPHAKAMIQQPR+PSSGLMPASDVLI
Sbjct: 187 MMQLKNEIHTVAVGSAIGQACLLLSAGSPGKRFMMPHAKAMIQQPRIPSSGLMPASDVLI 246

Query: 746 RAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEKVM 925
           RAKEV+ NRD LVKLLAKHTGNS ETV   MKRP+YMD+TRA+EFGVIDR+LWRGQEKVM
Sbjct: 247 RAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGQEKVM 306

Query: 926 SDATSPEDWDKLSGIKVLDG 985
           +D  SP+DWDK +GIK++DG
Sbjct: 307 ADVASPDDWDKGAGIKIVDG 326


>ref|XP_006576245.1| PREDICTED: uncharacterized protein LOC100809485 isoform X1 [Glycine
           max]
          Length = 324

 Score =  501 bits (1291), Expect = e-139
 Identities = 245/322 (76%), Positives = 286/322 (88%), Gaps = 4/322 (1%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRSA--SSTVPMPPLNPRDPFLSKLASVA 205
           MA++L++  ++ +     T  R  T CR+  +  +  ++ +PMPPLNP+DPFLSKLAS+A
Sbjct: 4   MAAYLRVPTSTPITPQSPTATR--TKCRNLKTSCSVNAAKIPMPPLNPKDPFLSKLASIA 61

Query: 206 AANPDLKLST--NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHG 379
           A++PD  L+T  NSDTPP+LD+FDSPKLMA+PAQVERSVSYNEHRPR+PPPDLPSLLLHG
Sbjct: 62  ASSPDTLLNTPKNSDTPPFLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHG 121

Query: 380 RIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIY 559
           RIVYIGMPLVPAVTELV+AEL+YLQYMDPKEPI++YINSTGTTRDDGETVGME+EGFAIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMYLQYMDPKEPIFIYINSTGTTRDDGETVGMETEGFAIY 181

Query: 560 DAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDV 739
           DAMMQLKNEI TVAVG+AIGQACLLL+AG  G+RFMMPHAKAMIQQPR+PSSGLMPASDV
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDV 241

Query: 740 LIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEK 919
           LIRAKEV+ NRD LVKLLAKHTGNS ETV   MKRP+YMD+TRA+EFGVIDR+LWRGQEK
Sbjct: 242 LIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGQEK 301

Query: 920 VMSDATSPEDWDKLSGIKVLDG 985
           VM+D  SP+DWDK +GIK++DG
Sbjct: 302 VMADVASPDDWDKGAGIKIVDG 323


>gb|EXC05639.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
           [Morus notabilis]
          Length = 329

 Score =  495 bits (1275), Expect = e-137
 Identities = 246/314 (78%), Positives = 277/314 (88%), Gaps = 2/314 (0%)
 Frame = +2

Query: 53  SVASSLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVAAANPDLKLS 232
           S +S  F      R  RT C SFN++ A + +P+PP+NP+DPFLSKLASVAA +P+  L 
Sbjct: 18  SSSSPFFLGPRNPRNFRTFC-SFNAK-AKAKIPVPPINPKDPFLSKLASVAATSPETLLD 75

Query: 233 --TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPL 406
              NS++PPYLDLFD+PKLMA+PAQVERSVSYN+ RP  PPPDLPSLLLHGRIVYIGMPL
Sbjct: 76  RPVNSESPPYLDLFDAPKLMATPAQVERSVSYNDQRPSTPPPDLPSLLLHGRIVYIGMPL 135

Query: 407 VPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIYDAMMQLKNE 586
           VPAVTELV+AEL+YLQ+MDPKEPIY+YINSTGTTRDDGETVGME+EGFAIYDAMMQLKNE
Sbjct: 136 VPAVTELVVAELMYLQWMDPKEPIYIYINSTGTTRDDGETVGMETEGFAIYDAMMQLKNE 195

Query: 587 IQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVVT 766
           I TVAVGAAIGQACLLL AG KG+RFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKE+VT
Sbjct: 196 IHTVAVGAAIGQACLLLLAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEIVT 255

Query: 767 NRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEKVMSDATSPE 946
           NRDTLVKLLAKHTGNS ETV   M+RPFYMD+T+A+EFGVID+VLWRGQEK+MSD   PE
Sbjct: 256 NRDTLVKLLAKHTGNSEETVANVMRRPFYMDATKAKEFGVIDKVLWRGQEKIMSDVAPPE 315

Query: 947 DWDKLSGIKVLDGM 988
           DWDK +GIKV+DG+
Sbjct: 316 DWDKSAGIKVVDGL 329


>ref|XP_007030998.1| ATP-dependent caseinolytic (Clp) protease/crotonase family protein
           isoform 1 [Theobroma cacao]
           gi|590644136|ref|XP_007030999.1| ATP-dependent
           caseinolytic (Clp) protease/crotonase family protein
           isoform 1 [Theobroma cacao] gi|508719603|gb|EOY11500.1|
           ATP-dependent caseinolytic (Clp) protease/crotonase
           family protein isoform 1 [Theobroma cacao]
           gi|508719604|gb|EOY11501.1| ATP-dependent caseinolytic
           (Clp) protease/crotonase family protein isoform 1
           [Theobroma cacao]
          Length = 325

 Score =  493 bits (1270), Expect = e-137
 Identities = 243/325 (74%), Positives = 290/325 (89%), Gaps = 7/325 (2%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTR--RRPRTV---CRSFNSRSASSTVPMPPLNPRDPFLSKLA 196
           MAS L   +A  + +S +++  RRP+ +   CR+F +++A+  +PMPP+NP+DPFLSKLA
Sbjct: 1   MASCLHAPMAYRIPSSASSQSVRRPKALTLSCRAFGAKNAAK-IPMPPVNPKDPFLSKLA 59

Query: 197 SVAAANPDLKLS--TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLL 370
           SVAA++P+  L+   N DTPPYLDLF+SPKLMA+PAQVERSVSYNEHRPR+PPPDLPSLL
Sbjct: 60  SVAASSPETLLNRPVNPDTPPYLDLFESPKLMATPAQVERSVSYNEHRPRRPPPDLPSLL 119

Query: 371 LHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGF 550
           LHGRIVYIGMPLVPAVTEL++AEL+YLQ+MDPK+PIYLYINSTGTTRDDGETVGME+EGF
Sbjct: 120 LHGRIVYIGMPLVPAVTELIVAELMYLQWMDPKQPIYLYINSTGTTRDDGETVGMETEGF 179

Query: 551 AIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPA 730
           A+YDA+M L+NEI TVAVGAAIGQACLLL+AG KG+RFMMPHAKAMIQQPR+PSSGLMPA
Sbjct: 180 AMYDALMNLQNEIHTVAVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRIPSSGLMPA 239

Query: 731 SDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRG 910
           SDVLIRAKEV+ NRD LV+LLAKHTGNSVE V   MKRPFYMD+TRA+EFGVID++LWRG
Sbjct: 240 SDVLIRAKEVIINRDILVELLAKHTGNSVEMVANVMKRPFYMDATRAKEFGVIDKILWRG 299

Query: 911 QEKVMSDATSPEDWDKLSGIKVLDG 985
           QEKVM++  +PE+WDK +GIKV+DG
Sbjct: 300 QEKVMAEVAAPEEWDKNAGIKVMDG 324


>ref|NP_001241928.1| uncharacterized protein LOC100809485 [Glycine max]
           gi|255635968|gb|ACU18330.1| unknown [Glycine max]
          Length = 324

 Score =  493 bits (1270), Expect = e-137
 Identities = 242/322 (75%), Positives = 284/322 (88%), Gaps = 4/322 (1%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRSA--SSTVPMPPLNPRDPFLSKLASVA 205
           MA++L++  ++ +     T  R  T CR+  +  +  ++ +PMPPLNP+DPFLSKLAS+A
Sbjct: 4   MAAYLRVPTSTPITPQSPTATR--TKCRNLKTSCSVNAAKIPMPPLNPKDPFLSKLASIA 61

Query: 206 AANPDLKLST--NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHG 379
           A++PD  L+T  NSDTPP+LD+FDSPKLMA+PAQVERSVSYNEHRPR+PPPDLPSLLLHG
Sbjct: 62  ASSPDTLLNTPKNSDTPPFLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHG 121

Query: 380 RIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIY 559
           RIVYIGMPLVPAVTELV+AEL+ LQYMDPKE I++YINSTGTTRDDGETVGME+EGFAIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTTRDDGETVGMETEGFAIY 181

Query: 560 DAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDV 739
           DAMMQLKNEI TVAVG+AIGQACLLL+AG  G+RFMMPHAKAMIQQPR+PSSGLMPASDV
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDV 241

Query: 740 LIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEK 919
           LIRAKEV+ NRD LVKLLAKHTGNS ETV   MKRP+YMD+TRA+EFGVIDR+LWRG+EK
Sbjct: 242 LIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRILWRGREK 301

Query: 920 VMSDATSPEDWDKLSGIKVLDG 985
           VM+D  SP+DWDK +GIK++DG
Sbjct: 302 VMADVASPDDWDKGAGIKIVDG 323


>ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
           communis] gi|223548389|gb|EEF49880.1| ATP-dependent Clp
           protease proteolytic subunit, putative [Ricinus
           communis]
          Length = 325

 Score =  493 bits (1269), Expect = e-137
 Identities = 245/310 (79%), Positives = 275/310 (88%), Gaps = 2/310 (0%)
 Frame = +2

Query: 59  ASSLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVAAANPDLKLST- 235
           +SS   S N++   R   R+     +SS +PMPP+NP+DPFLSKLAS+AA +PD  L   
Sbjct: 17  SSSSSASSNSQSLKR---RNLRINCSSSKIPMPPINPKDPFLSKLASIAANSPDSLLDRP 73

Query: 236 -NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVP 412
             SDTPP+LDLFDSPKLMA+PAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVP
Sbjct: 74  ITSDTPPFLDLFDSPKLMATPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVP 133

Query: 413 AVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIYDAMMQLKNEIQ 592
           AVTELV+AEL+YLQ+MDPKEPIYLYINSTGTTRDDGETVGME+EGFAIYD+MMQLKNEI 
Sbjct: 134 AVTELVVAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIYDSMMQLKNEIH 193

Query: 593 TVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVVTNR 772
           TVAVGAAIGQACLLLAAG KG+RFMMPHAKAMIQQP+VPSSGLM ASDVLIRAKE VTNR
Sbjct: 194 TVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPKVPSSGLMAASDVLIRAKEAVTNR 253

Query: 773 DTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEKVMSDATSPEDW 952
           DTLV+LLAKHT NSVETV  AMKRPFYMDS RA+EFGVID++LWRGQEK+M+D  +PE+W
Sbjct: 254 DTLVELLAKHTENSVETVANAMKRPFYMDSRRAKEFGVIDKILWRGQEKIMADVVTPEEW 313

Query: 953 DKLSGIKVLD 982
           DK++GIK+ D
Sbjct: 314 DKMAGIKIAD 323


>gb|EYU37284.1| hypothetical protein MIMGU_mgv1a010345mg [Mimulus guttatus]
          Length = 315

 Score =  492 bits (1267), Expect = e-136
 Identities = 248/323 (76%), Positives = 282/323 (87%), Gaps = 4/323 (1%)
 Frame = +2

Query: 32  MASFLQISVAS--SLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVA 205
           MA+ +++ + S  S  TSE  RR    + R+         +PMPPLNP+DPFLS+LASVA
Sbjct: 1   MANCMRMPMVSTTSCITSEKRRRSLCVINRT--------KIPMPPLNPKDPFLSRLASVA 52

Query: 206 AANPDLKLS--TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHG 379
           A +PD  L+  TNSDTPP+LD+F SP LMA+PAQVERSVSYNEHRPR+PPPDLPSLLLHG
Sbjct: 53  ATSPDTLLNRPTNSDTPPFLDIFHSPNLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHG 112

Query: 380 RIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIY 559
           RIVYIGMPLVPAVTELV+AEL+YLQ+MDPKEPIYLYINSTGTTRDDGETVGME+EGFAIY
Sbjct: 113 RIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIY 172

Query: 560 DAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDV 739
           DAMMQLKNEI TVAVGAAIGQACLLL+AG KG+RFMMPHAKAMIQQPRVPSSGLMPASDV
Sbjct: 173 DAMMQLKNEIHTVAVGAAIGQACLLLSAGTKGQRFMMPHAKAMIQQPRVPSSGLMPASDV 232

Query: 740 LIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEK 919
           LIRAKEV+ NRD LVKLLAKHTGNS E+V + MKRPFYMDSTRA+EFGVID++LWRGQEK
Sbjct: 233 LIRAKEVIINRDILVKLLAKHTGNSEESVASLMKRPFYMDSTRAKEFGVIDKILWRGQEK 292

Query: 920 VMSDATSPEDWDKLSGIKVLDGM 988
           +M+DA  PE+WDK +GI+VLD +
Sbjct: 293 IMADAAPPEEWDKNAGIRVLDAV 315


>ref|XP_002279451.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic [Vitis vinifera]
           gi|296089701|emb|CBI39520.3| unnamed protein product
           [Vitis vinifera]
          Length = 322

 Score =  492 bits (1267), Expect = e-136
 Identities = 245/322 (76%), Positives = 286/322 (88%), Gaps = 3/322 (0%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSEN-TRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVAA 208
           MA+ LQ+ +ASS+ +S + +  RP          + S+ +PM P+NP+DPFLSKLASVAA
Sbjct: 1   MAASLQLPMASSIPSSSSPSTTRPIFKTHCSMKPTCSAKIPMSPINPKDPFLSKLASVAA 60

Query: 209 ANPD--LKLSTNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHGR 382
            +P+  L+  + SD+ P+LDLFDSPKLMA+PAQVERSVSYNEHRPR+PPPDLPSLLLHGR
Sbjct: 61  TSPERLLQRPSGSDSLPFLDLFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGR 120

Query: 383 IVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIYD 562
           IVYIGMPLVPAVTELVIAEL+YLQ+MDPKEP+Y+YIN TGTTRDDGE VGME+EGFAIYD
Sbjct: 121 IVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTTRDDGERVGMETEGFAIYD 180

Query: 563 AMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDVL 742
           AMMQLKNEI TVAVGAAIGQACLLLAAG KG+RFMMPHAKAMIQQPRVPSSGLMPASDVL
Sbjct: 181 AMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVL 240

Query: 743 IRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEKV 922
           IRAKEV+TNRDTLVKLLAKHTGNS ETV+T M+RP+YMDST+A+EFGVID++LWRGQEK+
Sbjct: 241 IRAKEVITNRDTLVKLLAKHTGNSEETVSTVMRRPYYMDSTKAKEFGVIDKILWRGQEKI 300

Query: 923 MSDATSPEDWDKLSGIKVLDGM 988
           M+D  SPE+WDK +GI+V+DG+
Sbjct: 301 MADVLSPEEWDKNAGIQVVDGI 322


>ref|XP_004302392.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic-like [Fragaria vesca subsp.
           vesca]
          Length = 320

 Score =  492 bits (1266), Expect = e-136
 Identities = 247/320 (77%), Positives = 279/320 (87%), Gaps = 3/320 (0%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVAAA 211
           MAS LQI +     +S    +   T C S N+R A + +P+P +NPRDPFLS+LASVA  
Sbjct: 1   MASSLQIPICIPTCSSSRKSQTFSTSC-SLNAR-AKAKIPIPRINPRDPFLSRLASVAVN 58

Query: 212 NPDLKL---STNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHGR 382
           +P+  L   S NSD+ PYLD+FD PKLMA+PAQVERSVSYNEHRP+KPPPDLPSLLLHGR
Sbjct: 59  SPETLLNRPSNNSDSLPYLDIFDEPKLMATPAQVERSVSYNEHRPKKPPPDLPSLLLHGR 118

Query: 383 IVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIYD 562
           IVYIGMPLVPAVTEL++AEL+YLQ+MDPK+PIY+YINSTGTTRDDGETVGMESEGFAIYD
Sbjct: 119 IVYIGMPLVPAVTELIVAELMYLQWMDPKQPIYIYINSTGTTRDDGETVGMESEGFAIYD 178

Query: 563 AMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDVL 742
           AMMQLKNEI TVAVGAAIGQACLLLAAG KG RFMMPHAKAMIQQPRVPSSGLMPASDVL
Sbjct: 179 AMMQLKNEIHTVAVGAAIGQACLLLAAGTKGNRFMMPHAKAMIQQPRVPSSGLMPASDVL 238

Query: 743 IRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEKV 922
           IRAKEV+TNRDTLVKLL+KHTGNSVE V+  MKRP+YMDST A+EFGVID+VLWRGQEK+
Sbjct: 239 IRAKEVITNRDTLVKLLSKHTGNSVEAVSNLMKRPYYMDSTTAKEFGVIDKVLWRGQEKI 298

Query: 923 MSDATSPEDWDKLSGIKVLD 982
           M+D  SPEDWDK +G+KV+D
Sbjct: 299 MADVASPEDWDKNAGVKVVD 318


>ref|XP_007205539.1| hypothetical protein PRUPE_ppa008579mg [Prunus persica]
           gi|595826252|ref|XP_007205540.1| hypothetical protein
           PRUPE_ppa008579mg [Prunus persica]
           gi|462401181|gb|EMJ06738.1| hypothetical protein
           PRUPE_ppa008579mg [Prunus persica]
           gi|462401182|gb|EMJ06739.1| hypothetical protein
           PRUPE_ppa008579mg [Prunus persica]
          Length = 326

 Score =  488 bits (1257), Expect = e-135
 Identities = 245/324 (75%), Positives = 283/324 (87%), Gaps = 7/324 (2%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTR----RRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLAS 199
           MA+ L + ++ S  +S + R    RR    C S NS+ A   +P+PP+NP+DPFLS+L+S
Sbjct: 1   MATSLHLPISISATSSSSLRAKNTRRFAAFC-SINSK-AKVKIPIPPINPKDPFLSRLSS 58

Query: 200 VAAANPDLKLST---NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLL 370
           VAA +P+  L+    NSD+ PYLDLFD PKLMA+PAQVERSVSYNEHRPRKPPPDLPSLL
Sbjct: 59  VAANSPETLLNRPVQNSDSLPYLDLFDEPKLMATPAQVERSVSYNEHRPRKPPPDLPSLL 118

Query: 371 LHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGF 550
           LHGRIVYIGMPLVPAVTELV+AEL+YLQ+MDPK+PIY+YINSTGTTRDDGETVGMESEGF
Sbjct: 119 LHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKQPIYIYINSTGTTRDDGETVGMESEGF 178

Query: 551 AIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPA 730
           AIYDAMMQLKNEI TVAVGAAIGQACLLL+AG KG+RFMMPHAKAMIQQPRVPSSGLMPA
Sbjct: 179 AIYDAMMQLKNEIHTVAVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPA 238

Query: 731 SDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRG 910
           SDVLIRAKEV+TNRD L+KLLAKHTGNSVE VT  M+RP+YMDST A+EFGVID++LWRG
Sbjct: 239 SDVLIRAKEVMTNRDILIKLLAKHTGNSVEAVTNVMRRPYYMDSTTAKEFGVIDKILWRG 298

Query: 911 QEKVMSDATSPEDWDKLSGIKVLD 982
           QEK+M+D  SPE+WDK +G+KV+D
Sbjct: 299 QEKIMADVASPEEWDKKAGVKVVD 322


>ref|XP_007147022.1| hypothetical protein PHAVU_006G089800g [Phaseolus vulgaris]
           gi|561020245|gb|ESW19016.1| hypothetical protein
           PHAVU_006G089800g [Phaseolus vulgaris]
          Length = 329

 Score =  486 bits (1250), Expect = e-134
 Identities = 240/322 (74%), Positives = 283/322 (87%), Gaps = 5/322 (1%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRR---PRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASV 202
           MA++L++ + +   +S  T RR    RT C S N+ + ++ +PMPPLNP+DPFLSKLASV
Sbjct: 7   MAAYLRVPMLTFSQSSTATTRRCRNQRTRC-SVNAATNTAKIPMPPLNPKDPFLSKLASV 65

Query: 203 AAANPDLKLST--NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLH 376
           AA++P+  L+   NSDTPP+LD+FDSP LMA+PAQVERSVSYNEHRP +PPPDLPSLLL+
Sbjct: 66  AASSPETFLNPPRNSDTPPFLDIFDSPTLMATPAQVERSVSYNEHRPTRPPPDLPSLLLN 125

Query: 377 GRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAI 556
           GRI+YIGMPLVPAVTELV+AEL+YLQYMDPKEPIY+YINSTGTTRDDGETVGME+EGFAI
Sbjct: 126 GRIIYIGMPLVPAVTELVVAELMYLQYMDPKEPIYIYINSTGTTRDDGETVGMETEGFAI 185

Query: 557 YDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASD 736
           YD+MMQLKNEI TVAVGAAIGQACLLL+AG  G+RFMMPHAKAMIQQPR+PSSGLMPASD
Sbjct: 186 YDSMMQLKNEIHTVAVGAAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASD 245

Query: 737 VLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQE 916
           VLIRAKEV+ NR+ LVKLLAKHTGNS ETV   M+RP+YMD+T+A+EFGVIDRVLWRGQE
Sbjct: 246 VLIRAKEVIINRNNLVKLLAKHTGNSEETVANVMRRPYYMDATKAKEFGVIDRVLWRGQE 305

Query: 917 KVMSDATSPEDWDKLSGIKVLD 982
           K+M+D   PEDWDK +GI ++D
Sbjct: 306 KIMADVAPPEDWDKGAGINIVD 327


>ref|XP_006840521.1| hypothetical protein AMTR_s00045p00207040 [Amborella trichopoda]
           gi|548842239|gb|ERN02196.1| hypothetical protein
           AMTR_s00045p00207040 [Amborella trichopoda]
          Length = 285

 Score =  483 bits (1244), Expect = e-134
 Identities = 227/284 (79%), Positives = 269/284 (94%), Gaps = 1/284 (0%)
 Frame = +2

Query: 140 STVPMPPLNPRDPFLSKLASVAAANPDL-KLSTNSDTPPYLDLFDSPKLMASPAQVERSV 316
           +++P+PPLNP+DPFLSKLAS A+ +P+L + + N DTPP+LDLFD+PKLMA+PAQVER+V
Sbjct: 2   ASIPIPPLNPKDPFLSKLASAASISPNLIQPNKNDDTPPFLDLFDTPKLMATPAQVERAV 61

Query: 317 SYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINS 496
           SYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAEL+YLQ+MDPK+PIY+YINS
Sbjct: 62  SYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKQPIYIYINS 121

Query: 497 TGTTRDDGETVGMESEGFAIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPH 676
           TGTTRDDGETVGMESEGFAIYDAMMQLKNEIQTVAVGAAIG ACLLLAAG+KGRR+MMPH
Sbjct: 122 TGTTRDDGETVGMESEGFAIYDAMMQLKNEIQTVAVGAAIGHACLLLAAGRKGRRYMMPH 181

Query: 677 AKAMIQQPRVPSSGLMPASDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYM 856
           AKAMIQQPRVPSSG MPASDV+IRA EV+ NRDTLVKL+A+HTGNS+ET++  M+RPFYM
Sbjct: 182 AKAMIQQPRVPSSGQMPASDVIIRANEVINNRDTLVKLIARHTGNSIETISQVMRRPFYM 241

Query: 857 DSTRAQEFGVIDRVLWRGQEKVMSDATSPEDWDKLSGIKVLDGM 988
           DS +A+EFGVID++LWRGQEK+M++A SP++WDK++G++V DG+
Sbjct: 242 DSIKAKEFGVIDKILWRGQEKIMAEAASPDEWDKMAGVRVADGI 285


>ref|XP_002319519.1| ATP-dependent Clp protease proteolytic subunit family protein
           [Populus trichocarpa] gi|118486796|gb|ABK95233.1|
           unknown [Populus trichocarpa]
           gi|222857895|gb|EEE95442.1| ATP-dependent Clp protease
           proteolytic subunit family protein [Populus trichocarpa]
          Length = 341

 Score =  483 bits (1243), Expect = e-134
 Identities = 242/323 (74%), Positives = 275/323 (85%), Gaps = 13/323 (4%)
 Frame = +2

Query: 53  SVASSLFTSENTRRRPRTVCR-------SFNSR--SASSTVPMPPLNPRDPFLSKLASVA 205
           S+ SS   S++ + +P T+         S N+R  S+SS +PMPP+NP+DPFLSKLAS+A
Sbjct: 17  SLPSSTLYSKSIKLKPNTIDNLRIKCFASINARNSSSSSNIPMPPINPKDPFLSKLASIA 76

Query: 206 AANPDLKLS----TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLL 373
           A +PD  L     + SDTPPYLD+F+SPKLMA+PAQVERSVSYNEHRPR PPPDLPSLLL
Sbjct: 77  ATSPDSLLQDSPVSGSDTPPYLDIFESPKLMATPAQVERSVSYNEHRPRTPPPDLPSLLL 136

Query: 374 HGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFA 553
           HGRIVYIGMPLV AVTELV+AEL+YLQ+MDPK PIY+YINSTGTTRDDGE+VGME+EGFA
Sbjct: 137 HGRIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTTRDDGESVGMETEGFA 196

Query: 554 IYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPAS 733
           IYD+MMQLKNEI TVAVGAAIGQACLLLAAG KG R+MMPHAKAMIQQPRVPSSGLMPAS
Sbjct: 197 IYDSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHRYMMPHAKAMIQQPRVPSSGLMPAS 256

Query: 734 DVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQ 913
           DVLIRAKE V NRD L +LLAKHTGNSVETV   MKRPFYMDS RA+EFGVID++LW+GQ
Sbjct: 257 DVLIRAKEAVINRDVLTELLAKHTGNSVETVANVMKRPFYMDSRRAKEFGVIDKILWQGQ 316

Query: 914 EKVMSDATSPEDWDKLSGIKVLD 982
           EK+M+D   PEDWDK +GIKV D
Sbjct: 317 EKIMADVLPPEDWDKSAGIKVAD 339


>ref|XP_006344669.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic-like [Solanum tuberosum]
          Length = 326

 Score =  463 bits (1192), Expect = e-128
 Identities = 239/328 (72%), Positives = 273/328 (83%), Gaps = 9/328 (2%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRSA-----SSTVPMPPLNPRDPFLSKLA 196
           MA+ L++ +ASS+  S ++    +   RSFN R A     SS +PMPP NP+DPFLSKLA
Sbjct: 1   MATCLRLPMASSIPCSSSSSMTLKH--RSFNIRCAAYSNSSSNIPMPPFNPKDPFLSKLA 58

Query: 197 SVAAANPDLKLST--NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLL 370
           SVAA NPD   S   NSD PP+LD++DSPKLMA+PAQVERSVSYNEHR   PPPDLPS+L
Sbjct: 59  SVAANNPDALFSRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRASTPPPDLPSML 118

Query: 371 LHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGF 550
           LHGRIVYIGMPLV AVTELVIAEL+YLQYMDPK PIYLYINSTGTTRDDGETVGME+EGF
Sbjct: 119 LHGRIVYIGMPLVSAVTELVIAELMYLQYMDPKAPIYLYINSTGTTRDDGETVGMEAEGF 178

Query: 551 AIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPA 730
           AIYD+MMQL+NEI TVAVGAAIGQACLLLAAG KG+RFMMPHAKAMIQQPR PSSGLM A
Sbjct: 179 AIYDSMMQLQNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRAPSSGLMQA 238

Query: 731 SDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRG 910
           SDV IRAKEV+ NRDTLVKLLAKHT NS ETV+  M+RP+YMDS +A+EFGVID++LWRG
Sbjct: 239 SDVYIRAKEVIVNRDTLVKLLAKHTENSEETVSNVMRRPYYMDSIKAREFGVIDKILWRG 298

Query: 911 --QEKVMSDATSPEDWDKLSGIKVLDGM 988
             QE++M+   +PE WD  +GIKV D +
Sbjct: 299 QEQEQIMASVDAPEVWDNKAGIKVADAI 326


>ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
           lyrata] gi|297338325|gb|EFH68742.1| ClpP protease
           complex subunit ClpR3 [Arabidopsis lyrata subsp. lyrata]
          Length = 332

 Score =  463 bits (1192), Expect = e-128
 Identities = 231/330 (70%), Positives = 275/330 (83%), Gaps = 13/330 (3%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRS-----------ASSTVPMPPLNPRDP 178
           MAS LQ+S+ S L  S +    P     S   R+           AS+ +PMPP+NP+DP
Sbjct: 1   MASCLQVSMNSLLPRSSSFSPHPPLSLNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDP 60

Query: 179 FLSKLASVAAANPDLKLS--TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPP 352
           FLS LAS+AA +P+  L+   N+D PPYLD+FDSP+LM+SPAQVERSV+YNEHRPR PPP
Sbjct: 61  FLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPP 120

Query: 353 DLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVG 532
           DLPS+LL GRIVYIGMPLVPAVTELV+AEL+YLQ++DPKEPIY+YINSTGTTRDDGETVG
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180

Query: 533 MESEGFAIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPS 712
           MESEGFAIYD++MQLKNE+ TV VGAAIGQACLLL+AG KG RFMMPHAKAMIQQPRVPS
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGNRFMMPHAKAMIQQPRVPS 240

Query: 713 SGLMPASDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVID 892
           SGLMPASDVLIRAKEV+TNRD LV+LLAKHTGNSVETV   M+RP+YMD+ +A+EFGVID
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLAKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300

Query: 893 RVLWRGQEKVMSDATSPEDWDKLSGIKVLD 982
           ++LWRGQEK+++D    E++DK +GIK ++
Sbjct: 301 KILWRGQEKIIADVVPSEEFDKNAGIKSVE 330


>ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
           [Arabidopsis thaliana] gi|79317437|ref|NP_001031008.1|
           ATP-dependent Clp protease proteolytic subunit-related
           protein 3 [Arabidopsis thaliana]
           gi|75301131|sp|Q8L770.1|CLPR3_ARATH RecName:
           Full=ATP-dependent Clp protease proteolytic
           subunit-related protein 3, chloroplastic; Short=ClpR3;
           AltName: Full=nClpP8; Flags: Precursor
           gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease
           proteolytic subunit (ClpR3), putative [Arabidopsis
           thaliana] gi|25083963|gb|AAN72143.1| ATP-dependent Clp
           protease proteolytic subunit (ClpR3), putative
           [Arabidopsis thaliana] gi|51968388|dbj|BAD42886.1| ClpP
           protease complex subunit ClpR3 [Arabidopsis thaliana]
           gi|51968776|dbj|BAD43080.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51968816|dbj|BAD43100.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51969676|dbj|BAD43530.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51969856|dbj|BAD43620.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51969858|dbj|BAD43621.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51971032|dbj|BAD44208.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51971379|dbj|BAD44354.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51971381|dbj|BAD44355.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51971625|dbj|BAD44477.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|51971739|dbj|BAD44534.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|110742786|dbj|BAE99296.1| ClpP protease complex
           subunit ClpR3 [Arabidopsis thaliana]
           gi|332190276|gb|AEE28397.1| ATP-dependent Clp protease
           proteolytic subunit-related protein 3 [Arabidopsis
           thaliana] gi|332190277|gb|AEE28398.1| ATP-dependent Clp
           protease proteolytic subunit-related protein 3
           [Arabidopsis thaliana]
          Length = 330

 Score =  463 bits (1191), Expect = e-128
 Identities = 231/328 (70%), Positives = 278/328 (84%), Gaps = 14/328 (4%)
 Frame = +2

Query: 32  MASFLQISVAS------------SLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRD 175
           MAS LQ S+ S             L ++ + RR  +T   +F ++ AS+ +PMPP+NP+D
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAK-ASAKIPMPPINPKD 59

Query: 176 PFLSKLASVAAANPDLKLS--TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPP 349
           PFLS LAS+AA +P+  L+   N+D PPYLD+FDSP+LM+SPAQVERSV+YNEHRPR PP
Sbjct: 60  PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119

Query: 350 PDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETV 529
           PDLPS+LL GRIVYIGMPLVPAVTELV+AEL+YLQ++DPKEPIY+YINSTGTTRDDGETV
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179

Query: 530 GMESEGFAIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVP 709
           GMESEGFAIYD++MQLKNE+ TV VGAAIGQACLLL+AG KG+RFMMPHAKAMIQQPRVP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239

Query: 710 SSGLMPASDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVI 889
           SSGLMPASDVLIRAKEV+TNRD LV+LL+KHTGNSVETV   M+RP+YMD+ +A+EFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299

Query: 890 DRVLWRGQEKVMSDATSPEDWDKLSGIK 973
           DR+LWRGQEK+++D    E++DK +GIK
Sbjct: 300 DRILWRGQEKIIADVVPSEEFDKNAGIK 327


>ref|NP_001184945.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
           [Arabidopsis thaliana] gi|332190278|gb|AEE28399.1|
           ATP-dependent Clp protease proteolytic subunit-related
           protein 3 [Arabidopsis thaliana]
          Length = 370

 Score =  463 bits (1191), Expect = e-128
 Identities = 231/328 (70%), Positives = 278/328 (84%), Gaps = 14/328 (4%)
 Frame = +2

Query: 32  MASFLQISVAS------------SLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRD 175
           MAS LQ S+ S             L ++ + RR  +T   +F ++ AS+ +PMPP+NP+D
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAK-ASAKIPMPPINPKD 59

Query: 176 PFLSKLASVAAANPDLKLS--TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPP 349
           PFLS LAS+AA +P+  L+   N+D PPYLD+FDSP+LM+SPAQVERSV+YNEHRPR PP
Sbjct: 60  PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119

Query: 350 PDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETV 529
           PDLPS+LL GRIVYIGMPLVPAVTELV+AEL+YLQ++DPKEPIY+YINSTGTTRDDGETV
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179

Query: 530 GMESEGFAIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVP 709
           GMESEGFAIYD++MQLKNE+ TV VGAAIGQACLLL+AG KG+RFMMPHAKAMIQQPRVP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239

Query: 710 SSGLMPASDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVI 889
           SSGLMPASDVLIRAKEV+TNRD LV+LL+KHTGNSVETV   M+RP+YMD+ +A+EFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299

Query: 890 DRVLWRGQEKVMSDATSPEDWDKLSGIK 973
           DR+LWRGQEK+++D    E++DK +GIK
Sbjct: 300 DRILWRGQEKIIADVVPSEEFDKNAGIK 327


>dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
          Length = 315

 Score =  462 bits (1189), Expect = e-127
 Identities = 224/304 (73%), Positives = 270/304 (88%), Gaps = 2/304 (0%)
 Frame = +2

Query: 68  LFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRDPFLSKLASVAAANPDLKLS--TNS 241
           L ++ + RR  +T   +F ++ AS+ +PMPP+NP+DPFLS LAS+AA +P+  L+   N+
Sbjct: 10  LSSNSSGRRNLKTFRYAFRAK-ASAKIPMPPINPKDPFLSTLASIAANSPEKLLNRPVNA 68

Query: 242 DTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLLLHGRIVYIGMPLVPAVT 421
           D PPYLD+FDSP+LM+SPAQVERSV+YNEHRPR PPPDLPS+LL GRIVYIGMPLVPAVT
Sbjct: 69  DVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVT 128

Query: 422 ELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGFAIYDAMMQLKNEIQTVA 601
           ELV+AEL+YLQ++DPKEPIY+YINSTGTTRDDGETVGMESEGFAIYD++MQLKNE+ TV 
Sbjct: 129 ELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVC 188

Query: 602 VGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVVTNRDTL 781
           VGAAIGQACLLL+AG KG+RFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEV+TNRD L
Sbjct: 189 VGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDIL 248

Query: 782 VKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRGQEKVMSDATSPEDWDKL 961
           V+LL+KHTGNSVETV   M+RP+YMD+ +A+EFGVIDR+LWRGQEK+++D    E++DK 
Sbjct: 249 VELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKN 308

Query: 962 SGIK 973
           +GIK
Sbjct: 309 AGIK 312


>dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
          Length = 330

 Score =  461 bits (1187), Expect = e-127
 Identities = 230/328 (70%), Positives = 278/328 (84%), Gaps = 14/328 (4%)
 Frame = +2

Query: 32  MASFLQISVAS------------SLFTSENTRRRPRTVCRSFNSRSASSTVPMPPLNPRD 175
           MAS LQ S+ S             L ++ + RR  +T   +F ++ AS+ +PMPP+NP+D
Sbjct: 1   MASCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAK-ASAKIPMPPINPKD 59

Query: 176 PFLSKLASVAAANPDLKLS--TNSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPP 349
           PFLS LAS+AA +P+  L+   N+D PPYLD+FDSP+LM+SPAQVERSV+YNEHRPR PP
Sbjct: 60  PFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPP 119

Query: 350 PDLPSLLLHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETV 529
           PDLPS+LL GRIVYIGMPLVPAVTELV+AEL+YLQ++DPKEPIY+YINSTGTTRDDGETV
Sbjct: 120 PDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETV 179

Query: 530 GMESEGFAIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVP 709
           GMESEGFAIYD++MQLKNE+ TV VGAAIGQACLLL+AG KG+RFMMPHAKAMIQ+PRVP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQRPRVP 239

Query: 710 SSGLMPASDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVI 889
           SSGLMPASDVLIRAKEV+TNRD LV+LL+KHTGNSVETV   M+RP+YMD+ +A+EFGVI
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299

Query: 890 DRVLWRGQEKVMSDATSPEDWDKLSGIK 973
           DR+LWRGQEK+++D    E++DK +GIK
Sbjct: 300 DRILWRGQEKIIADVVPSEEFDKNAGIK 327


>ref|XP_004230237.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
           protein 3, chloroplastic-like isoform 2 [Solanum
           lycopersicum]
          Length = 326

 Score =  459 bits (1180), Expect = e-126
 Identities = 237/326 (72%), Positives = 271/326 (83%), Gaps = 9/326 (2%)
 Frame = +2

Query: 32  MASFLQISVASSLFTSENTRRRPRTVCRSFNSRSA-----SSTVPMPPLNPRDPFLSKLA 196
           MA+ L++ +ASS+  S ++    +   RSFN R A     SS +PMPP NP+DPFLSKLA
Sbjct: 1   MATCLRLPMASSIPCSSSSSMTLKH--RSFNFRCAAYSNSSSNIPMPPFNPKDPFLSKLA 58

Query: 197 SVAAANPDLKLST--NSDTPPYLDLFDSPKLMASPAQVERSVSYNEHRPRKPPPDLPSLL 370
           SVAA NPD   S   NSD PP+LD++DSPKLMA+PAQVERSVSYNEHR   PPPDLPS+L
Sbjct: 59  SVAANNPDALFSRPQNSDMPPFLDIYDSPKLMATPAQVERSVSYNEHRASTPPPDLPSML 118

Query: 371 LHGRIVYIGMPLVPAVTELVIAELLYLQYMDPKEPIYLYINSTGTTRDDGETVGMESEGF 550
           LHGRIVYIGMPLV AVTELVIAEL+YLQYMDPK PIYLYINSTGTTRDDGETVGME+EGF
Sbjct: 119 LHGRIVYIGMPLVSAVTELVIAELMYLQYMDPKAPIYLYINSTGTTRDDGETVGMEAEGF 178

Query: 551 AIYDAMMQLKNEIQTVAVGAAIGQACLLLAAGKKGRRFMMPHAKAMIQQPRVPSSGLMPA 730
           AIYD+MMQL+NEI TVAVGAAIGQACLLLAAG KG+RFMMPHAKAMIQQPR PSSGLM A
Sbjct: 179 AIYDSMMQLQNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRAPSSGLMQA 238

Query: 731 SDVLIRAKEVVTNRDTLVKLLAKHTGNSVETVTTAMKRPFYMDSTRAQEFGVIDRVLWRG 910
           SDV IRAKEV+ NRD LVKLLAKHT NS ETV+  M+RP+YMDS +A+EFGVID++LWRG
Sbjct: 239 SDVYIRAKEVLVNRDNLVKLLAKHTENSEETVSNVMRRPYYMDSIKAREFGVIDKILWRG 298

Query: 911 --QEKVMSDATSPEDWDKLSGIKVLD 982
             QE++++   +PE WD  +GIKV D
Sbjct: 299 QEQEQIIASVDAPEVWDNRAGIKVAD 324