BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00003856
         (1173 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...    77   1e-11
emb|CAN65206.1| hypothetical protein VITISV_016718 [Vitis vinifera]    70   1e-09
ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populu...    70   2e-09
ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...    69   3e-09
ref|XP_006389319.1| 5'-3' exoribonuclease family protein [Populu...    68   7e-09
ref|XP_007208373.1| hypothetical protein PRUPE_ppa000881mg [Prun...    62   6e-07
ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citr...    60   2e-06
ref|XP_006433056.1| hypothetical protein CICLE_v10000168mg [Citr...    60   2e-06

>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
 Frame = +2

Query: 8    QARERPQVXXXXXXXXXXXXXHQLLKSVLHINP--STSMTCGYQPYPRITGN----RPRP 169
            Q RERPQV             H+L+K+ L+I P  S+S     Q Y  I GN    RPRP
Sbjct: 738  QGRERPQVARAIAGPLLGEAAHRLVKNTLNIRPNGSSSKFLEQQTYRNIPGNSTFNRPRP 797

Query: 170  AGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHREQ 349
            AGP GYE G+     Y   + N  + ++++    + +  +     R N R +D++ + E 
Sbjct: 798  AGPSGYERGYSNDPNYYYGHHNYQQGLMSNPRSPLFS--NGVSSNRHNFRTQDRVQYHE- 854

Query: 350  WQWRHLQSWVSGLRIEERPGRRPQDQIPLKSSRAGNSNELQQQ 478
             Q+R L++ +S L +EE    RP   +  ++   G S+ LQQQ
Sbjct: 855  -QYRDLKTGMSALTMEENVKSRPPAVMSQRTQNTGYSSSLQQQ 896


>emb|CAN65206.1| hypothetical protein VITISV_016718 [Vitis vinifera]
          Length = 389

 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
 Frame = +2

Query: 8   QARERPQVXXXXXXXXXXXXXHQLLKSVLHINPSTS-----MTCGYQPYP-RITGNRPRP 169
           Q RERPQV             H+LLK+ L+I P+ +     +   Y+  P     NRPRP
Sbjct: 140 QGRERPQVPRAISGPLLGEAAHRLLKNTLNIKPNNTSSGMLLQTPYRNMPSNYVVNRPRP 199

Query: 170 AGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHREQ 349
           AGP GYE GF     Y   + ++P+  +  S      +P+  +G R N RV+D+ + ++ 
Sbjct: 200 AGPSGYEKGFNGDSNYYYGHYDNPRGAL--SIPRFPPSPNNMQGNRQNFRVQDRSTFQD- 256

Query: 350 WQWRHLQSWVSGLRIEE--RPGRRPQDQIPLKSSRAGNSNELQQQPNNKIEGKRIEEVVR 523
            Q+R+ ++ +S L  E+  R   RP  Q        G S               IEE VR
Sbjct: 257 -QYRNSRTGMSALTTEQNFRVQHRPPYQDQFSELSMGMST------------LTIEEGVR 303

Query: 524 QRPPNQMLSKNSKAGSSNDLQQQHVKSE 607
            R P    S+   A  + +   Q V+++
Sbjct: 304 TRQPIVRPSRMPSAADTLNTNNQFVQNK 331


>ref|XP_006382752.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
            gi|550338119|gb|ERP60549.1| 5'-3' exoribonuclease family
            protein [Populus trichocarpa]
          Length = 948

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 48/157 (30%), Positives = 76/157 (48%)
 Frame = +2

Query: 8    QARERPQVXXXXXXXXXXXXXHQLLKSVLHINPSTSMTCGYQPYPRITGNRPRPAGPPGY 187
            Q RERPQV             H+L+K+ L+I P+ S + G       T NRPRPAGP GY
Sbjct: 737  QGRERPQVPRAVAGPVLGEAAHRLVKNTLNIKPNGSSSRG-----NYTFNRPRPAGPAGY 791

Query: 188  ESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHREQWQWRHL 367
              G+     Y   + N+ + ++++    V++  +  +G R NSR +D++ + +  Q+  L
Sbjct: 792  GRGYGDDPNYHYAHYNNQQGLMSNHMYPVSS--NGVQGNRHNSRPQDRVQYHQ--QYHDL 847

Query: 368  QSWVSGLRIEERPGRRPQDQIPLKSSRAGNSNELQQQ 478
             + VS L +EE    R    I  +    G +  L  Q
Sbjct: 848  STGVSALTVEENFRSRAPAVISPRIPNPGYTTNLYNQ 884


>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 9/210 (4%)
 Frame = +2

Query: 8    QARERPQVXXXXXXXXXXXXXHQLLKSVLHINPSTS-----MTCGYQPYP-RITGNRPRP 169
            Q RERPQV             H+LLK+ L+I P+ +     +   Y+  P     NRPRP
Sbjct: 726  QGRERPQVPRAISGPLLGEAAHRLLKNTLNIKPNNTSSGMLLQTPYRNMPSNYVVNRPRP 785

Query: 170  AGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHREQ 349
            AGP GYE GF     Y   + ++P+  +  S      +P+  +G R N RV+D+ + ++ 
Sbjct: 786  AGPSGYEKGFNGDSNYYYGHYDNPRGAL--SIPRFPPSPNNMQGNRQNFRVQDRSTFQD- 842

Query: 350  WQWRHLQSWVSG---LRIEERPGRRPQDQIPLKSSRAGNSNELQQQPNNKIEGKRIEEVV 520
             Q+R+ ++ + G   L IEE  G R +  I ++ SR  ++ +     N  ++ K      
Sbjct: 843  -QYRNSRTGIMGMSTLTIEE--GVRTRQPI-VRPSRMPSAADTLNTNNQFVQNKS----- 893

Query: 521  RQRPPNQMLSKNSKAGSSNDLQQQHVKSEG 610
               PP++ + + +   +   ++QQ   S G
Sbjct: 894  PPAPPSKWIERQATGNAGMIVRQQDNVSAG 923


>ref|XP_006389319.1| 5'-3' exoribonuclease family protein [Populus trichocarpa]
            gi|550312079|gb|ERP48233.1| 5'-3' exoribonuclease family
            protein [Populus trichocarpa]
          Length = 965

 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
 Frame = +2

Query: 8    QARERPQVXXXXXXXXXXXXXHQLLKSVLHINP--STSMTCGYQPYPRITGN----RPRP 169
            Q RERPQV             H+L+K+ L+I P  S+S     Q Y  I GN    RPRP
Sbjct: 737  QGRERPQVQRAIAGPFLGDAAHRLVKNTLNIKPNGSSSRVFDQQLYHNIPGNYTFYRPRP 796

Query: 170  AGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHREQ 349
            AGP GY  G+     Y  + Q+S ++ + S+     +  +  +  R N R +D + + + 
Sbjct: 797  AGPAGYGRGYWDDPNY-HYAQHSNQQGLMSNP-RYRSLSNGVQSNRHNFRTQDGVQYHQ- 853

Query: 350  WQWRHLQSWVSGLRIEERPGRRPQDQIPLKSSRAGNSNELQQQ 478
             Q+ +L + VS L +EE    R    I  +    GN+  LQ Q
Sbjct: 854  -QYHNLSTGVSALTVEENIRSRAPAVISPRMPNPGNTPNLQNQ 895


>ref|XP_007208373.1| hypothetical protein PRUPE_ppa000881mg [Prunus persica]
            gi|462404015|gb|EMJ09572.1| hypothetical protein
            PRUPE_ppa000881mg [Prunus persica]
          Length = 972

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
 Frame = +2

Query: 8    QARERPQVXXXXXXXXXXXXXHQLLKSVLHI--NPSTSMTCGYQPYPRITGN----RPRP 169
            Q RERPQV             H+L+K+ L+I  N S S     QP     GN    RPRP
Sbjct: 734  QGRERPQVPGAIAGPMLGEAAHRLVKNTLNIRSNNSASGFWDQQPLRNFPGNYPVNRPRP 793

Query: 170  AGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATP-----HQAKGKRWNSRVEDQI 334
            AGP GYE GF +  +Y   N  +P+        G+ A P     +  +G R + R ++++
Sbjct: 794  AGPSGYEKGFREEAKY--GNSFTPQ--------GIMARPRFPSSNGMQGDRQSFRAQERV 843

Query: 335  SHRE-----------QWQWRHLQSWVSGLRIEER-PGRRPQDQIPLKSSRAGNSNELQQQ 478
             ++E           Q Q+  L++ +SGL +EE    R P  Q  + +S  G S   Q Q
Sbjct: 844  QYQEQSFRTQERVQYQEQYHSLRTGMSGLTMEESVRTRSPAGQPGMPNS--GYSTNPQHQ 901

Query: 479  PNNKIEGKRIEEVVRQRPPNQMLSKNSKAGSSNDLQQQ 592
                       +     PP + ++K S A      +QQ
Sbjct: 902  ---------FAQDALPSPPPKWINKESTANGGLYNRQQ 930


>ref|XP_006433057.1| hypothetical protein CICLE_v10000168mg [Citrus clementina]
            gi|568835355|ref|XP_006471738.1| PREDICTED: 5'-3'
            exoribonuclease 4-like [Citrus sinensis]
            gi|557535179|gb|ESR46297.1| hypothetical protein
            CICLE_v10000168mg [Citrus clementina]
          Length = 959

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
 Frame = +2

Query: 8    QARERPQVXXXXXXXXXXXXXHQLLKSVLHINPSTSMTCGYQP-YPRITGN------RPR 166
            Q RERPQV             H+L+K+ L+  P+ S     QP Y    GN      R R
Sbjct: 740  QGRERPQVPGAIAGPVLGEAAHRLIKNTLNYKPNGSPGFFEQPSYRNFQGNYANAVTRLR 799

Query: 167  PAGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHRE 346
            PA P G+E G+    +Y   N N P+ +  +S   V +   Q  G + ++R++++  H++
Sbjct: 800  PAAPSGHERGYGDESRYNYGNYNYPQGMRGNSRFPVPSNGMQ--GNQHHARMQERFQHQD 857

Query: 347  QWQWRHLQSWVSGLRIEERPGRRPQDQIPLKSSRAGNSNELQQQ 478
                  L + +S L IEE    RP   +  +   +G S    QQ
Sbjct: 858  ------LGTGMSALAIEESTRSRPPIVMLSRVQNSGYSGNPSQQ 895


>ref|XP_006433056.1| hypothetical protein CICLE_v10000168mg [Citrus clementina]
           gi|557535178|gb|ESR46296.1| hypothetical protein
           CICLE_v10000168mg [Citrus clementina]
          Length = 750

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 7/164 (4%)
 Frame = +2

Query: 8   QARERPQVXXXXXXXXXXXXXHQLLKSVLHINPSTSMTCGYQP-YPRITGN------RPR 166
           Q RERPQV             H+L+K+ L+  P+ S     QP Y    GN      R R
Sbjct: 531 QGRERPQVPGAIAGPVLGEAAHRLIKNTLNYKPNGSPGFFEQPSYRNFQGNYANAVTRLR 590

Query: 167 PAGPPGYESGFVQSKQYPDHNQNSPKEVINSSTVGVAATPHQAKGKRWNSRVEDQISHRE 346
           PA P G+E G+    +Y   N N P+ +  +S   V +   Q  G + ++R++++  H++
Sbjct: 591 PAAPSGHERGYGDESRYNYGNYNYPQGMRGNSRFPVPSNGMQ--GNQHHARMQERFQHQD 648

Query: 347 QWQWRHLQSWVSGLRIEERPGRRPQDQIPLKSSRAGNSNELQQQ 478
                 L + +S L IEE    RP   +  +   +G S    QQ
Sbjct: 649 ------LGTGMSALAIEESTRSRPPIVMLSRVQNSGYSGNPSQQ 686