BLASTX nr result
ID: Cocculus23_contig00003680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00003680
(357 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007035430.1| Ribosomal protein L33 family protein [Theobr... 73 4e-11
gb|ABK21647.1| unknown [Picea sitchensis] gi|116780944|gb|ABK218... 73 5e-11
gb|EMT32803.1| 50S ribosomal protein L33 [Aegilops tauschii] 72 6e-11
ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group] g... 72 6e-11
emb|CBI26135.3| unnamed protein product [Vitis vinifera] 72 8e-11
ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis ... 72 8e-11
gb|ABK21866.1| unknown [Picea sitchensis] 71 1e-10
ref|XP_006489189.1| PREDICTED: 54S ribosomal protein L39, mitoch... 69 5e-10
ref|XP_002505615.1| predicted protein [Micromonas sp. RCC299] gi... 69 5e-10
ref|XP_002516842.1| structural constituent of ribosome, putative... 69 5e-10
gb|ACG30463.1| 50S ribosomal protein L33 [Zea mays] 69 5e-10
gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis] 69 9e-10
ref|XP_006407961.1| hypothetical protein EUTSA_v10022246mg, part... 68 2e-09
ref|XP_006400432.1| hypothetical protein EUTSA_v10015229mg [Eutr... 68 2e-09
ref|XP_006299449.1| hypothetical protein CARUB_v10015614mg [Caps... 68 2e-09
ref|NP_187283.1| ribosomal protein L33 family protein [Arabidops... 68 2e-09
ref|XP_002314445.1| ribosomal protein L33 [Populus trichocarpa] ... 68 2e-09
ref|XP_001784185.1| predicted protein [Physcomitrella patens] gi... 66 6e-09
ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [C... 65 8e-09
ref|XP_005851290.1| hypothetical protein CHLNCDRAFT_19156 [Chlor... 65 8e-09
>ref|XP_007035430.1| Ribosomal protein L33 family protein [Theobroma cacao]
gi|508714459|gb|EOY06356.1| Ribosomal protein L33 family
protein [Theobroma cacao]
Length = 58
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ KKV +KLEFRKYDPRVN HVLFTEQK+K
Sbjct: 18 AGTGFFYVKRKSAKKVAEKLEFRKYDPRVNRHVLFTEQKMK 58
>gb|ABK21647.1| unknown [Picea sitchensis] gi|116780944|gb|ABK21892.1| unknown
[Picea sitchensis]
Length = 57
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+K+ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 17 AGTGFFYVKRKNPRKLPEKLEFRKYDPRVNRHVLFTEAKMK 57
>gb|EMT32803.1| 50S ribosomal protein L33 [Aegilops tauschii]
Length = 86
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+++ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 17 AGTGFFYVKRKNPRRITEKLEFRKYDPRVNKHVLFTEAKMK 57
>ref|NP_001055710.1| Os05g0452600 [Oryza sativa Japonica Group]
gi|226493452|ref|NP_001150073.1| LOC100283702 [Zea mays]
gi|242088467|ref|XP_002440066.1| hypothetical protein
SORBIDRAFT_09g025380 [Sorghum bicolor]
gi|357133012|ref|XP_003568122.1| PREDICTED: 50S
ribosomal protein L33-like [Brachypodium distachyon]
gi|357136557|ref|XP_003569870.1| PREDICTED: 50S
ribosomal protein L33-like [Brachypodium distachyon]
gi|514748027|ref|XP_004961515.1| PREDICTED: 39S
ribosomal protein L33, mitochondrial-like [Setaria
italica] gi|113579261|dbj|BAF17624.1| Os05g0452600
[Oryza sativa Japonica Group]
gi|195629488|gb|ACG36385.1| 50S ribosomal protein L33
[Zea mays] gi|195636476|gb|ACG37706.1| 50S ribosomal
protein L33 [Zea mays] gi|195637860|gb|ACG38398.1| 50S
ribosomal protein L33 [Zea mays]
gi|195656701|gb|ACG47818.1| 50S ribosomal protein L33
[Zea mays] gi|218196895|gb|EEC79322.1| hypothetical
protein OsI_20170 [Oryza sativa Indica Group]
gi|218197095|gb|EEC79522.1| hypothetical protein
OsI_20605 [Oryza sativa Indica Group]
gi|222632209|gb|EEE64341.1| hypothetical protein
OsJ_19181 [Oryza sativa Japonica Group]
gi|223975085|gb|ACN31730.1| unknown [Zea mays]
gi|241945351|gb|EES18496.1| hypothetical protein
SORBIDRAFT_09g025380 [Sorghum bicolor]
gi|413946041|gb|AFW78690.1| hypothetical protein
ZEAMMB73_147625 [Zea mays] gi|413946042|gb|AFW78691.1|
hypothetical protein ZEAMMB73_147625 [Zea mays]
gi|413946043|gb|AFW78692.1| hypothetical protein
ZEAMMB73_147625 [Zea mays] gi|413946044|gb|AFW78693.1|
hypothetical protein ZEAMMB73_147625 [Zea mays]
gi|474195996|gb|EMS58366.1| 50S ribosomal protein L33
[Triticum urartu] gi|474407096|gb|EMS66535.1| 50S
ribosomal protein L33 [Triticum urartu]
Length = 57
Score = 72.4 bits (176), Expect = 6e-11
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+++ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 17 AGTGFFYVKRKNPRRITEKLEFRKYDPRVNKHVLFTEAKMK 57
>emb|CBI26135.3| unnamed protein product [Vitis vinifera]
Length = 101
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+K+ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 61 AGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 101
>ref|XP_002278027.1| PREDICTED: 50S ribosomal protein L33 [Vitis vinifera]
Length = 59
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+K+ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 19 AGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 59
>gb|ABK21866.1| unknown [Picea sitchensis]
Length = 57
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = -1
Query: 354 GTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
GTGFFYVK KNP+K+ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 18 GTGFFYVKRKNPRKLPEKLEFRKYDPRVNRHVLFTEAKMK 57
>ref|XP_006489189.1| PREDICTED: 54S ribosomal protein L39, mitochondrial-like isoform X1
[Citrus sinensis] gi|568872054|ref|XP_006489190.1|
PREDICTED: 54S ribosomal protein L39, mitochondrial-like
isoform X2 [Citrus sinensis]
gi|568872056|ref|XP_006489191.1| PREDICTED: 54S
ribosomal protein L39, mitochondrial-like isoform X3
[Citrus sinensis]
Length = 57
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ KKV +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 17 AGTGFFYVKRKSAKKVLEKLEFRKYDPRVNRHVLFTEAKMK 57
>ref|XP_002505615.1| predicted protein [Micromonas sp. RCC299]
gi|226520885|gb|ACO66873.1| predicted protein
[Micromonas sp. RCC299]
Length = 74
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIKY 232
A TGFFYVK +NPKK+ KLEFRKYDPRV HVLF EQK+KY
Sbjct: 18 AKTGFFYVKRRNPKKLLNKLEFRKYDPRVKKHVLFVEQKLKY 59
>ref|XP_002516842.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223543930|gb|EEF45456.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 58
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ KKV +KLEFRK+DPRVN HVLFTE K+K
Sbjct: 18 AGTGFFYVKRKSAKKVAEKLEFRKFDPRVNRHVLFTEAKMK 58
>gb|ACG30463.1| 50S ribosomal protein L33 [Zea mays]
Length = 57
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+++ +KLEFRK DPRVN HVLFTE K+K
Sbjct: 17 AGTGFFYVKRKNPRRITEKLEFRKXDPRVNKHVLFTEAKMK 57
>gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]
Length = 62
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ KK+ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 22 AGTGFFYVKRKSFKKITEKLEFRKYDPRVNRHVLFTEAKMK 62
>ref|XP_006407961.1| hypothetical protein EUTSA_v10022246mg, partial [Eutrema
salsugineum] gi|557109107|gb|ESQ49414.1| hypothetical
protein EUTSA_v10022246mg, partial [Eutrema salsugineum]
Length = 95
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ K + +KLEFRKYDPRVN HVLFTEQK+K
Sbjct: 55 AGTGFFYVKRKSSKGLLEKLEFRKYDPRVNRHVLFTEQKMK 95
>ref|XP_006400432.1| hypothetical protein EUTSA_v10015229mg [Eutrema salsugineum]
gi|567175443|ref|XP_006400433.1| hypothetical protein
EUTSA_v10015229mg [Eutrema salsugineum]
gi|557101522|gb|ESQ41885.1| hypothetical protein
EUTSA_v10015229mg [Eutrema salsugineum]
gi|557101523|gb|ESQ41886.1| hypothetical protein
EUTSA_v10015229mg [Eutrema salsugineum]
Length = 58
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ K + +KLEFRKYDPRVN HVLFTEQK+K
Sbjct: 18 AGTGFFYVKRKSSKGLLEKLEFRKYDPRVNRHVLFTEQKMK 58
>ref|XP_006299449.1| hypothetical protein CARUB_v10015614mg [Capsella rubella]
gi|482568158|gb|EOA32347.1| hypothetical protein
CARUB_v10015614mg [Capsella rubella]
Length = 97
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ K + +KLEFRKYDPRVN HVLFTEQK+K
Sbjct: 57 AGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQKMK 97
>ref|NP_187283.1| ribosomal protein L33 family protein [Arabidopsis thaliana]
gi|15239562|ref|NP_197380.1| ribosomal protein L33
family protein [Arabidopsis thaliana]
gi|297812063|ref|XP_002873915.1| ribosomal protein L33
family protein [Arabidopsis lyrata subsp. lyrata]
gi|297829162|ref|XP_002882463.1| ribosomal protein L33
family protein [Arabidopsis lyrata subsp. lyrata]
gi|6437554|gb|AAF08581.1|AC011623_14 putative 50S
ribosomal protein L33 [Arabidopsis thaliana]
gi|21536699|gb|AAM61031.1| ribosomal protein L33-like
[Arabidopsis thaliana] gi|38566500|gb|AAR24140.1|
At5g18790 [Arabidopsis thaliana]
gi|40823687|gb|AAR92299.1| At5g18790 [Arabidopsis
thaliana] gi|51969692|dbj|BAD43538.1| putative 50S
ribosomal protein L33 [Arabidopsis thaliana]
gi|109134211|gb|ABG25103.1| At3g06320 [Arabidopsis
thaliana] gi|297319752|gb|EFH50174.1| ribosomal protein
L33 family protein [Arabidopsis lyrata subsp. lyrata]
gi|297328303|gb|EFH58722.1| ribosomal protein L33 family
protein [Arabidopsis lyrata subsp. lyrata]
gi|332005229|gb|AED92612.1| ribosomal protein L33 family
protein [Arabidopsis thaliana]
gi|332640853|gb|AEE74374.1| ribosomal protein L33 family
protein [Arabidopsis thaliana]
Length = 58
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ K + +KLEFRKYDPRVN HVLFTEQK+K
Sbjct: 18 AGTGFFYVKRKSTKGLLEKLEFRKYDPRVNRHVLFTEQKMK 58
>ref|XP_002314445.1| ribosomal protein L33 [Populus trichocarpa]
gi|118481950|gb|ABK92907.1| unknown [Populus
trichocarpa] gi|222863485|gb|EEF00616.1| ribosomal
protein L33 [Populus trichocarpa]
Length = 58
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K+ KK +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 18 AGTGFFYVKRKSAKKALEKLEFRKYDPRVNRHVLFTEAKMK 58
>ref|XP_001784185.1| predicted protein [Physcomitrella patens]
gi|162664257|gb|EDQ50983.1| predicted protein
[Physcomitrella patens]
Length = 57
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK KNP+K+ KLE RKYDP VN HVLFTE K+K
Sbjct: 17 AGTGFFYVKPKNPRKLTTKLEMRKYDPVVNKHVLFTEAKMK 57
>ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [Cucumis sativus]
gi|449488522|ref|XP_004158068.1| PREDICTED: 50S
ribosomal protein L33-like [Cucumis sativus]
Length = 57
Score = 65.5 bits (158), Expect = 8e-09
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTGFFYVK K P K+ +KLEFRKYDPRVN HVLFTE K+K
Sbjct: 18 AGTGFFYVKRK-PTKITEKLEFRKYDPRVNRHVLFTEAKMK 57
>ref|XP_005851290.1| hypothetical protein CHLNCDRAFT_19156 [Chlorella variabilis]
gi|307110953|gb|EFN59188.1| hypothetical protein
CHLNCDRAFT_19156 [Chlorella variabilis]
Length = 57
Score = 65.5 bits (158), Expect = 8e-09
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = -1
Query: 357 AGTGFFYVKYKNPKKVGQKLEFRKYDPRVNCHVLFTEQKIK 235
AGTG+FYV KNP+K+ QKLEF KYDPRV HVLFTE K+K
Sbjct: 17 AGTGYFYVARKNPRKLPQKLEFVKYDPRVRRHVLFTETKLK 57