BLASTX nr result
ID: Cocculus23_contig00003391
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00003391
(1603 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI36671.3| unnamed protein product [Vitis vinifera] 91 2e-15
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 89 6e-15
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 88 1e-14
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 88 1e-14
gb|EYU30521.1| hypothetical protein MIMGU_mgv1a000041mg [Mimulus... 88 1e-14
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 87 2e-14
ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, par... 87 2e-14
ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prun... 87 3e-14
gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlise... 86 4e-14
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 86 4e-14
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 86 4e-14
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 86 5e-14
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 86 5e-14
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 86 6e-14
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 84 2e-13
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 84 2e-13
gb|EPS58129.1| hypothetical protein M569_16686, partial [Genlise... 83 3e-13
ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arab... 83 3e-13
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 83 4e-13
gb|EYU41212.1| hypothetical protein MIMGU_mgv1a000056mg [Mimulus... 82 5e-13
>emb|CBI36671.3| unnamed protein product [Vitis vinifera]
Length = 1405
Score = 90.5 bits (223), Expect = 2e-15
Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 1/191 (0%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK + +KN DK+ E
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNETVKN-PDKKKE 167
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDFFRDDRYDRLIGEEIKDGRDSLFVPEEGFYQPRTE 1036
IE++LN +P+H F+QL+ ITDF +E +G +L V + Y
Sbjct: 168 IERLLNPIPNHIFDQLVSIGRLITDF----------QDEANEGM-TLNVQDIDAY----- 211
Query: 1035 ETWMAYKLLLDVIRSQIGHDQPDVILCM-IAHEVLQILKNEQFGPLETRKRMLENLLNWI 859
W+ K+ SQ Q D C +A EVL+IL +ET+ LL +
Sbjct: 212 --WLQRKI------SQAYEQQIDPQQCQKLAEEVLKILAEGDDREVETK------LLVHL 257
Query: 858 SDDNFNRLVFV 826
D F+ + F+
Sbjct: 258 QFDKFSLIKFL 268
Score = 70.5 bits (171), Expect = 2e-09
Identities = 44/101 (43%), Positives = 63/101 (62%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE + +K+
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNETVKNPD-KKK 166
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRV 763
+E LLN I + F++LV +G +I DFQD N G+ V
Sbjct: 167 EIERLLNPIPNHIFDQLVSIGRLITDFQDE--ANEGMTLNV 205
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 89.0 bits (219), Expect = 6e-15
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = -2
Query: 1455 RNSDETDEMKAVDDDSPFVPERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAH 1276
R E + A DD G YQP T++T AY+A+L +++QQLGG S++ G A
Sbjct: 97 RRLQEESVLTATDD--------GVYQPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAAD 148
Query: 1275 EVLSVLKCQNIKNLLDKRAEIEKILNRLPDHTFEQLLESSGCITDFFR-DDRYDRLIGEE 1099
E+L+VLK +KN DK+ +IEK+LN +P+H F+QL+ ITDF D + G +
Sbjct: 149 EILAVLKNDTVKN-PDKKKDIEKLLNPIPNHVFDQLVSIGKLITDFQEVSDAVNGSAGGD 207
Query: 1098 IKDGRD 1081
+ G D
Sbjct: 208 VDGGLD 213
Score = 67.0 bits (162), Expect = 2e-08
Identities = 48/154 (31%), Positives = 79/154 (51%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L ++G YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ +
Sbjct: 105 LTATDDGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLSIVSGAADEILAVLKNDTVKNPD 163
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFD 718
+K+ +E LLN I + F++LV +G +I DFQ+ V V + + D +D D
Sbjct: 164 -KKKDIEKLLNPIPNHVFDQLVSIGKLITDFQE-------VSDAVNGSAGGDVDGGLDDD 215
Query: 717 QSTQNPWSDGGSPLEWEPENPSQQPELSNHDQMA 616
+ + + E + Q E + D +A
Sbjct: 216 VGVAVEFEENEDDEDEESDLDMVQEEEEDDDDLA 249
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 88.2 bits (217), Expect = 1e-14
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK + +KN DK+ E
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNETVKN-PDKKKE 167
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IE++LN +P+H F+QL+ ITDF
Sbjct: 168 IERLLNPIPNHIFDQLVSIGRLITDF 193
Score = 73.9 bits (180), Expect = 2e-10
Identities = 56/152 (36%), Positives = 81/152 (53%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE + +K+
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNETVKNPD-KKK 166
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFDQSTQ 706
+E LLN I + F++LV +G +I DFQD G + GP AAN D +D D
Sbjct: 167 EIERLLNPIPNHIFDQLVSIGRLITDFQD---GGDA----AGPT-AANGDDALDDDVGVA 218
Query: 705 NPWSDGGSPLEWEPENPSQQPELSNHDQMAWN 610
+ + E + Q+ E + D M N
Sbjct: 219 VEFEENEDEEEESDLDMVQEDEEEDDDVMEQN 250
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 88.2 bits (217), Expect = 1e-14
Identities = 41/86 (47%), Positives = 62/86 (72%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK + +KN DK+ E
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNETVKN-PDKKKE 167
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IE++LN +P+H F+QL+ ITDF
Sbjct: 168 IERLLNPIPNHIFDQLVSIGRLITDF 193
Score = 73.9 bits (180), Expect = 2e-10
Identities = 56/152 (36%), Positives = 81/152 (53%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE + +K+
Sbjct: 109 EEGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNETVKNPD-KKK 166
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFDQSTQ 706
+E LLN I + F++LV +G +I DFQD G + GP AAN D +D D
Sbjct: 167 EIERLLNPIPNHIFDQLVSIGRLITDFQD---GGDA----AGPT-AANGDDALDDDVGVA 218
Query: 705 NPWSDGGSPLEWEPENPSQQPELSNHDQMAWN 610
+ + E + Q+ E + D M N
Sbjct: 219 VEFEENEDEEEESDLDMVQEDEEEDDDVMEQN 250
>gb|EYU30521.1| hypothetical protein MIMGU_mgv1a000041mg [Mimulus guttatus]
Length = 2168
Score = 87.8 bits (216), Expect = 1e-14
Identities = 51/129 (39%), Positives = 78/129 (60%), Gaps = 17/129 (13%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L ++QQLGG +++ G A E+L+VLK N+KN DK+AE
Sbjct: 106 EEGVYQPKTKETRAAYEAMLSAIQQQLGGQPLNIVSGAADEILAVLKNDNLKN-PDKKAE 164
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDFF---------RDDRYDRLIG--------EEIKDG 1087
IEK+LN + TF++L+++ +TD++ RDD D +G EE ++
Sbjct: 165 IEKLLNPISVATFDELVKTGRLVTDYYHDAGDAAVDRDDVLDDDVGVAVEFEEDEEEEEE 224
Query: 1086 RDSLFVPEE 1060
D VPE+
Sbjct: 225 SDLDMVPED 233
Score = 60.5 bits (145), Expect = 2e-06
Identities = 36/87 (41%), Positives = 53/87 (60%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG YQP+T+ET AY+ +L I+ Q+G QP I+ A E+L +LKN+ + +K
Sbjct: 106 EEGVYQPKTKETRAAYEAMLSAIQQQLG-GQPLNIVSGAADEILAVLKNDNLKNPD-KKA 163
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDF 805
+E LLN IS F+ LV G ++ D+
Sbjct: 164 EIEKLLNPISVATFDELVKTGRLVTDY 190
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 87.4 bits (215), Expect = 2e-14
Identities = 46/107 (42%), Positives = 70/107 (65%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK +KN DK+ E
Sbjct: 113 EEGTYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNDAVKN-PDKKKE 171
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDFFRDDRYDRLIGEEIKDGRDSL 1075
IEK+LN +P+H F+QL+ ITD+ D D G ++ +G + L
Sbjct: 172 IEKLLNPIPNHVFDQLVSIGKLITDY--QDAGD-AAGNDVANGGEDL 215
Score = 67.8 bits (164), Expect = 1e-08
Identities = 40/93 (43%), Positives = 60/93 (64%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ +
Sbjct: 109 LTASEEGTYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNDAVKNPD 167
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQD 799
+K+ +E LLN I + F++LV +G +I D+QD
Sbjct: 168 -KKKEIEKLLNPIPNHVFDQLVSIGKLITDYQD 199
>ref|XP_006428572.1| hypothetical protein CICLE_v100108901mg, partial [Citrus clementina]
gi|557530629|gb|ESR41812.1| hypothetical protein
CICLE_v100108901mg, partial [Citrus clementina]
Length = 1791
Score = 87.4 bits (215), Expect = 2e-14
Identities = 46/107 (42%), Positives = 70/107 (65%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK +KN DK+ E
Sbjct: 113 EEGTYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNDAVKN-PDKKKE 171
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDFFRDDRYDRLIGEEIKDGRDSL 1075
IEK+LN +P+H F+QL+ ITD+ D D G ++ +G + L
Sbjct: 172 IEKLLNPIPNHVFDQLVSIGKLITDY--QDAGD-AAGNDVANGGEDL 215
Score = 67.8 bits (164), Expect = 1e-08
Identities = 40/93 (43%), Positives = 60/93 (64%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ +
Sbjct: 109 LTASEEGTYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNDAVKNPD 167
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQD 799
+K+ +E LLN I + F++LV +G +I D+QD
Sbjct: 168 -KKKEIEKLLNPIPNHVFDQLVSIGKLITDYQD 199
>ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
gi|462404052|gb|EMJ09609.1| hypothetical protein
PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 86.7 bits (213), Expect = 3e-14
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +S++ G A E+L+VLK + KN DK+ E
Sbjct: 108 EEGVYQPKTKETRAAYEAMLSVIQQQLGGQPSSIVSGAADEILAVLKNETFKN-PDKKKE 166
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IEK+LN +P+ F+QL+ ITDF
Sbjct: 167 IEKMLNPIPNSVFDQLVSIGRLITDF 192
Score = 76.6 bits (187), Expect = 3e-11
Identities = 52/154 (33%), Positives = 80/154 (51%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE F +
Sbjct: 104 LTATEEGVYQPKTKETRAAYEAMLSVIQQQLG-GQPSSIVSGAADEILAVLKNETFKNPD 162
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFD 718
+K+ +E +LN I + F++LV +G +I DFQD G + AN D +D D
Sbjct: 163 -KKKEIEKMLNPIPNSVFDQLVSIGRLITDFQD--------GGDAGGSAVANGDEALDDD 213
Query: 717 QSTQNPWSDGGSPLEWEPENPSQQPELSNHDQMA 616
+ + + + Q+ E + D +A
Sbjct: 214 VGVAVEFEENEDDEDESDLDMVQEDEEEDDDDVA 247
>gb|EPS64394.1| hypothetical protein M569_10384, partial [Genlisea aurea]
Length = 977
Score = 86.3 bits (212), Expect = 4e-14
Identities = 41/93 (44%), Positives = 63/93 (67%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
+ G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK +N+KN DK+ E
Sbjct: 123 DEGVYQPKTKETAAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNENLKN-PDKKKE 181
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDFFRDDRYD 1117
IEK+LN +P F+QL+ ITD++ D
Sbjct: 182 IEKLLNPIPGSMFDQLVSIGRLITDYYEGGDLD 214
Score = 64.7 bits (156), Expect = 1e-07
Identities = 37/89 (41%), Positives = 57/89 (64%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
+EG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE + +K+
Sbjct: 123 DEGVYQPKTKETAAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNENLKNPD-KKK 180
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQD 799
+E LLN I F++LV +G +I D+ +
Sbjct: 181 EIEKLLNPIPGSMFDQLVSIGRLITDYYE 209
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 86.3 bits (212), Expect = 4e-14
Identities = 42/88 (47%), Positives = 61/88 (69%)
Frame = -2
Query: 1401 VPERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKR 1222
V E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK + IKN DK+
Sbjct: 105 VTEEGVYQPKTKETRAAYEAMLSLIQQQLGGQPLNIVSGAADEILAVLKNEGIKN-PDKK 163
Query: 1221 AEIEKILNRLPDHTFEQLLESSGCITDF 1138
EIEK+LN +P F+QL+ ITD+
Sbjct: 164 KEIEKLLNPIPSQVFDQLVSIGKLITDY 191
Score = 72.8 bits (177), Expect = 4e-10
Identities = 49/153 (32%), Positives = 81/153 (52%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L V EEG YQP+T+ET AY+ +L +I+ Q+G QP I+ A E+L +LKNE +
Sbjct: 103 LSVTEEGVYQPKTKETRAAYEAMLSLIQQQLG-GQPLNIVSGAADEILAVLKNEGIKNPD 161
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFD 718
+K+ +E LLN I F++LV +G +I D+QD G G + V+F+
Sbjct: 162 -KKKEIEKLLNPIPSQVFDQLVSIGKLITDYQDGGEGGGGSMGNGDDGLDDDVGVAVEFE 220
Query: 717 QSTQNPWSDGGSPLEWEPENPSQQPELSNHDQM 619
++ ++ + + E E+ Q+ ++M
Sbjct: 221 EN-EDEEEESDLDMVQEDEDEDQEERKKIEEEM 252
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 86.3 bits (212), Expect = 4e-14
Identities = 42/88 (47%), Positives = 61/88 (69%)
Frame = -2
Query: 1401 VPERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKR 1222
V E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK + IKN DK+
Sbjct: 105 VTEEGVYQPKTKETRAAYEAMLSLIQQQLGGQPLNIVSGAADEILAVLKNEGIKN-PDKK 163
Query: 1221 AEIEKILNRLPDHTFEQLLESSGCITDF 1138
EIEK+LN +P F+QL+ ITD+
Sbjct: 164 KEIEKLLNPIPSQVFDQLVSIGKLITDY 191
Score = 72.0 bits (175), Expect = 7e-10
Identities = 45/122 (36%), Positives = 69/122 (56%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L V EEG YQP+T+ET AY+ +L +I+ Q+G QP I+ A E+L +LKNE +
Sbjct: 103 LSVTEEGVYQPKTKETRAAYEAMLSLIQQQLG-GQPLNIVSGAADEILAVLKNEGIKNPD 161
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFD 718
+K+ +E LLN I F++LV +G +I D+QD G G + V+F+
Sbjct: 162 -KKKEIEKLLNPIPSQVFDQLVSIGKLITDYQDGGEGGGGSMGNGDDGLDDDVGVAVEFE 220
Query: 717 QS 712
++
Sbjct: 221 EN 222
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 85.9 bits (211), Expect = 5e-14
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Frame = -2
Query: 1467 VDMERNSDETDEMKAVDDDSPFVPER---------------GFYQPSTEDTWEAYQALLC 1333
++ +N + + A DD+ VP + G YQP T++T AY+A+L
Sbjct: 71 LEKAKNKKKKKDRDAAADDATAVPSKRRRVQHDSVLSTSDDGVYQPKTKETRAAYEAMLS 130
Query: 1332 IVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAEIEKILNRLPDHTFEQLLESSG 1153
+++ QLGG S++ A E+L+VLK +KN DK+ +IEK+LN +P H F+QL+
Sbjct: 131 VIQNQLGGQPLSIVSAAADEILAVLKNDTVKN-PDKKKDIEKLLNPIPGHVFDQLVSIGK 189
Query: 1152 CITDFFRDDRYDRLIGEEIKDGRDSL 1075
ITDF + D G DG + L
Sbjct: 190 LITDF--QEVVDVPNGSSAMDGEEGL 213
Score = 65.9 bits (159), Expect = 5e-08
Identities = 38/93 (40%), Positives = 60/93 (64%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L ++G YQP+T+ET AY+ +L VI++Q+G QP I+ A E+L +LKN+ +
Sbjct: 106 LSTSDDGVYQPKTKETRAAYEAMLSVIQNQLG-GQPLSIVSAAADEILAVLKNDTVKNPD 164
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQD 799
+K+ +E LLN I F++LV +G +I DFQ+
Sbjct: 165 -KKKDIEKLLNPIPGHVFDQLVSIGKLITDFQE 196
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 85.9 bits (211), Expect = 5e-14
Identities = 45/106 (42%), Positives = 66/106 (62%)
Frame = -2
Query: 1455 RNSDETDEMKAVDDDSPFVPERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAH 1276
R E + A DD G YQP T++T AY+A+L +++QQLGG S++ G A
Sbjct: 100 RRMMEESVLTATDD--------GVYQPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAAD 151
Query: 1275 EVLSVLKCQNIKNLLDKRAEIEKILNRLPDHTFEQLLESSGCITDF 1138
E+L+VLK +KN +DK+ +IEK+LN +P+ F+QL+ ITDF
Sbjct: 152 EILAVLKNDTLKN-VDKKKDIEKLLNTIPNQVFDQLVSIGKLITDF 196
Score = 68.6 bits (166), Expect = 8e-09
Identities = 38/93 (40%), Positives = 61/93 (65%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L ++G YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ ++
Sbjct: 108 LTATDDGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLSIVSGAADEILAVLKNDTLKNVD 166
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQD 799
+K+ +E LLN I + F++LV +G +I DFQ+
Sbjct: 167 -KKKDIEKLLNTIPNQVFDQLVSIGKLITDFQE 198
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 85.5 bits (210), Expect = 6e-14
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 15/146 (10%)
Frame = -2
Query: 1467 VDMERNSDETDEMKAVDDDSPFVPER---------------GFYQPSTEDTWEAYQALLC 1333
++ +N + + A DD+ VP + G YQP T++T AY+A+L
Sbjct: 71 LEKAKNKKKKKDRDAAADDAAAVPSKRRRVQHDSVLSASDDGVYQPKTKETRAAYEAMLS 130
Query: 1332 IVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAEIEKILNRLPDHTFEQLLESSG 1153
+++ QLGG S++ A E+L+VLK +KN DK+ +IEK+LN +P H F+QL+
Sbjct: 131 VIQNQLGGQPLSIVSAAADEILAVLKNDVVKN-PDKKKDIEKLLNPIPGHVFDQLVSIGK 189
Query: 1152 CITDFFRDDRYDRLIGEEIKDGRDSL 1075
ITDF + D G DG + L
Sbjct: 190 LITDF--QEAVDVPNGSSAMDGEEGL 213
Score = 65.5 bits (158), Expect = 7e-08
Identities = 38/93 (40%), Positives = 60/93 (64%)
Frame = -2
Query: 1077 LFVPEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLE 898
L ++G YQP+T+ET AY+ +L VI++Q+G QP I+ A E+L +LKN+ +
Sbjct: 106 LSASDDGVYQPKTKETRAAYEAMLSVIQNQLG-GQPLSIVSAAADEILAVLKNDVVKNPD 164
Query: 897 TRKRMLENLLNWISDDNFNRLVFVGGIIQDFQD 799
+K+ +E LLN I F++LV +G +I DFQ+
Sbjct: 165 -KKKDIEKLLNPIPGHVFDQLVSIGKLITDFQE 196
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 83.6 bits (205), Expect = 2e-13
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G Y P T++T AY+A+L +++QQLGG S++ G A E+L+VLK + KN DK+ E
Sbjct: 108 EEGVYMPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKN-PDKKKE 166
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IEK+LN +P++ F+QL+ ITD+
Sbjct: 167 IEKLLNPIPNNVFDQLVSIGRLITDY 192
Score = 74.7 bits (182), Expect = 1e-10
Identities = 53/143 (37%), Positives = 81/143 (56%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG Y P+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ F + +K+
Sbjct: 108 EEGVYMPKTKETRAAYEAMLSVIQQQLG-GQPLSIVSGAADEILAVLKNDSFKNPD-KKK 165
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFDQSTQ 706
+E LLN I ++ F++LV +G +I D+QD GN+ GPA AN D +D
Sbjct: 166 EIEKLLNPIPNNVFDQLVSIGRLITDYQD---GNDA----TGPA-TANGDGALD------ 211
Query: 705 NPWSDGGSPLEWEPENPSQQPEL 637
D G +E+E ++ +L
Sbjct: 212 ---DDIGVAVEFEENEEEEESDL 231
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 83.6 bits (205), Expect = 2e-13
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G Y P T++T AY+A+L +++QQLGG S++ G A E+L+VLK + KN DK+ E
Sbjct: 108 EEGVYMPKTKETRAAYEAMLSVIQQQLGGQPLSIVSGAADEILAVLKNDSFKN-PDKKKE 166
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IEK+LN +P++ F+QL+ ITD+
Sbjct: 167 IEKLLNPIPNNVFDQLVSIGRLITDY 192
Score = 74.7 bits (182), Expect = 1e-10
Identities = 53/143 (37%), Positives = 81/143 (56%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG Y P+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ F + +K+
Sbjct: 108 EEGVYMPKTKETRAAYEAMLSVIQQQLG-GQPLSIVSGAADEILAVLKNDSFKNPD-KKK 165
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFDQSTQ 706
+E LLN I ++ F++LV +G +I D+QD GN+ GPA AN D +D
Sbjct: 166 EIEKLLNPIPNNVFDQLVSIGRLITDYQD---GNDA----TGPA-TANGDGALD------ 211
Query: 705 NPWSDGGSPLEWEPENPSQQPEL 637
D G +E+E ++ +L
Sbjct: 212 ---DDIGVAVEFEENEEEEESDL 231
>gb|EPS58129.1| hypothetical protein M569_16686, partial [Genlisea aurea]
Length = 301
Score = 83.2 bits (204), Expect = 3e-13
Identities = 39/86 (45%), Positives = 61/86 (70%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
+ G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK +N+KN +K+ E
Sbjct: 52 DEGVYQPKTKETAAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNENLKN-PEKKKE 110
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IEK+LN +P F+QL+ ITD+
Sbjct: 111 IEKLLNPIPGSMFDQLVSIGRLITDY 136
Score = 68.2 bits (165), Expect = 1e-08
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
+EG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE E +K+
Sbjct: 52 DEGVYQPKTKETAAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNENLKNPE-KKK 109
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQ------DRRL-GNNGVPSRVGPA--FAAN--T 739
+E LLN I F++LV +G +I D++ D L G +G+ VG A F N
Sbjct: 110 EIEKLLNPIPGSMFDQLVSIGRLITDYREGGDLDDAALNGADGLDDDVGVAVEFEENEEE 169
Query: 738 DRTVDFDQSTQNPWSDGGSPLEWEPENPSQQPELSNHDQMAWNA 607
+ D D ++ D E E Q ++ D W A
Sbjct: 170 EEESDLDIVPEDEDEDDDDVAEIERSGAMQMGGSNDDDDDDWGA 213
>ref|XP_002879976.1| hypothetical protein ARALYDRAFT_483318 [Arabidopsis lyrata subsp.
lyrata] gi|297325815|gb|EFH56235.1| hypothetical protein
ARALYDRAFT_483318 [Arabidopsis lyrata subsp. lyrata]
Length = 2168
Score = 83.2 bits (204), Expect = 3e-13
Identities = 40/100 (40%), Positives = 68/100 (68%)
Frame = -2
Query: 1389 GFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAEIE 1210
G YQP +++T A++ +L +++QQLGG +++CG A E+L+VLK +++KN +K+ EIE
Sbjct: 107 GVYQPKSKETRAAFETMLSLIQQQLGGQPLNIVCGAADEILAVLKNESVKN-HEKKVEIE 165
Query: 1209 KILNRLPDHTFEQLLESSGCITDFFRDDRYDRLIGEEIKD 1090
K+LN +PD F Q + ITD ++++ D L G+ +D
Sbjct: 166 KLLNIIPDKVFNQFVTIGKLITD-YQEEGGDSLSGQACED 204
Score = 67.8 bits (164), Expect = 1e-08
Identities = 47/156 (30%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
Frame = -2
Query: 1251 QNIKNLLDKRAEIEKILNRLPDHTFEQLLESSGCITDFFRDDRYDRLIG-EEIKDGRDSL 1075
++++ +D ++ ++++ P E+L +S + +R D ++ +E K R
Sbjct: 45 ESLRGRIDPKSFGDRVVKGRPHELDERLKQSK-------KKEREDDMVSTQESKRPRLRE 97
Query: 1074 FV----PEEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFG 907
+ ++G YQP+++ET A++ +L +I+ Q+G QP I+C A E+L +LKNE
Sbjct: 98 VIVLTDTDDGVYQPKSKETRAAFETMLSLIQQQLG-GQPLNIVCGAADEILAVLKNESVK 156
Query: 906 PLETRKRMLENLLNWISDDNFNRLVFVGGIIQDFQD 799
E +K +E LLN I D FN+ V +G +I D+Q+
Sbjct: 157 NHE-KKVEIEKLLNIIPDKVFNQFVTIGKLITDYQE 191
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 82.8 bits (203), Expect = 4e-13
Identities = 44/107 (41%), Positives = 70/107 (65%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ A E+L+VLK ++++ DKR E
Sbjct: 108 EEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSAAADEILAVLKNESVRT-QDKRKE 166
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDFFRDDRYDRLIGEEIKDGRDSL 1075
IEK+LN +P++ FEQ++ ITD+ D D G + +G D+L
Sbjct: 167 IEKLLNPIPNNMFEQVVSIGRLITDY--QDAGDG-AGASVANGDDAL 210
Score = 79.0 bits (193), Expect = 6e-12
Identities = 50/143 (34%), Positives = 78/143 (54%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKNE + RK
Sbjct: 108 EEGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSAAADEILAVLKNESVRTQDKRKE 166
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFDQSTQ 706
+E LLN I ++ F ++V +G +I D+QD G + A V+FD+ +
Sbjct: 167 -IEKLLNPIPNNMFEQVVSIGRLITDYQDAGDGAGASVANGDDALDDGVGVAVEFDEDNE 225
Query: 705 NPWSDGGSPLEWEPENPSQQPEL 637
+ D S L+ PE ++ ++
Sbjct: 226 DEEED--SDLDMVPEEEEEEDDV 246
>gb|EYU41212.1| hypothetical protein MIMGU_mgv1a000056mg [Mimulus guttatus]
Length = 2013
Score = 82.4 bits (202), Expect = 5e-13
Identities = 39/86 (45%), Positives = 61/86 (70%)
Frame = -2
Query: 1395 ERGFYQPSTEDTWEAYQALLCIVEQQLGGYSTSVLCGVAHEVLSVLKCQNIKNLLDKRAE 1216
E G YQP T++T AY+A+L +++QQLGG +++ G A E+L+VLK N+KN DK+ E
Sbjct: 106 EEGVYQPKTKETRAAYEAMLSVIQQQLGGQPLNIVSGAADEILAVLKNDNLKN-PDKKKE 164
Query: 1215 IEKILNRLPDHTFEQLLESSGCITDF 1138
IEK+LN + TF++L++ +TD+
Sbjct: 165 IEKLLNPISVSTFDELVKIGRLVTDY 190
Score = 70.5 bits (171), Expect = 2e-09
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
Frame = -2
Query: 1065 EEGFYQPRTEETWMAYKLLLDVIRSQIGHDQPDVILCMIAHEVLQILKNEQFGPLETRKR 886
EEG YQP+T+ET AY+ +L VI+ Q+G QP I+ A E+L +LKN+ + +K+
Sbjct: 106 EEGVYQPKTKETRAAYEAMLSVIQQQLG-GQPLNIVSGAADEILAVLKNDNLKNPD-KKK 163
Query: 885 MLENLLNWISDDNFNRLVFVGGIIQDFQDRRLGNNGVPSRVGPAFAANTDRTVDFD---- 718
+E LLN IS F+ LV +G ++ D+ D S G A A N D +D D
Sbjct: 164 EIEKLLNPISVSTFDELVKIGRLVTDYHD--------ASDAGDA-AVNGDDGLDDDVGVA 214
Query: 717 -QSTQNPWSDGGSPLEWEPENPSQQPELSNHD 625
+ +N + S L+ PE+ +++ D
Sbjct: 215 VEFEENEEEEEESDLDMVPEDEEDDDDVAEVD 246