BLASTX nr result
ID: Cocculus23_contig00003144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00003144
(4353 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC21916.1| Tripartite motif-containing protein 45 [Morus not... 566 e-158
ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244... 564 e-157
emb|CBI36502.3| unnamed protein product [Vitis vinifera] 557 e-155
ref|XP_002518040.1| conserved hypothetical protein [Ricinus comm... 556 e-155
ref|XP_002300152.2| RNA recognition motif-containing family prot... 533 e-148
ref|XP_004296963.1| PREDICTED: uncharacterized protein LOC101297... 532 e-148
ref|XP_006373080.1| hypothetical protein POPTR_0017s08510g [Popu... 532 e-148
ref|XP_006373079.1| RNA recognition motif-containing family prot... 532 e-148
ref|XP_007034240.1| RNA recognition motif-containing protein iso... 530 e-147
ref|XP_007034241.1| RNA recognition motif-containing protein iso... 524 e-145
ref|XP_007224346.1| hypothetical protein PRUPE_ppa020677mg, part... 523 e-145
ref|XP_002885603.1| hypothetical protein ARALYDRAFT_898933 [Arab... 511 e-141
dbj|BAB03007.1| unnamed protein product [Arabidopsis thaliana] 508 e-140
ref|NP_189032.2| RNA recognition motif (RRM)-containing protein ... 507 e-140
ref|NP_001030753.1| RNA recognition motif (RRM)-containing prote... 501 e-138
ref|XP_006296861.1| hypothetical protein CARUB_v10012848mg [Caps... 493 e-136
ref|XP_006421067.1| hypothetical protein CICLE_v10004448mg [Citr... 482 e-133
ref|XP_006492975.1| PREDICTED: uncharacterized protein LOC102615... 481 e-132
ref|XP_006848480.1| hypothetical protein AMTR_s00013p00253930 [A... 474 e-130
ref|XP_007034247.1| RNA recognition motif-containing protein iso... 462 e-127
>gb|EXC21916.1| Tripartite motif-containing protein 45 [Morus notabilis]
Length = 973
Score = 567 bits (1460), Expect = e-158
Identities = 364/906 (40%), Positives = 465/906 (51%), Gaps = 38/906 (4%)
Frame = +3
Query: 321 VKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVG 500
+ KP+GP DPAKC SSFVV KD+DGRK PNGG +KVK+ PGVG
Sbjct: 68 LSRKPIGPADPAKCMAAGAGIAGGTACAPSSFVVTAKDADGRKCPNGGAQIKVKVSPGVG 127
Query: 501 VGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSAS----NAG 668
VGG++QEG+VKD GDGTY VTYVVPKRGNYMV+V+CNGKPIMGSPFPVFFSA +G
Sbjct: 128 VGGTEQEGVVKDMGDGTYTVTYVVPKRGNYMVNVECNGKPIMGSPFPVFFSAGATTPTSG 187
Query: 669 GLLGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSS 848
GLLG+ PT+ F N VNQTMPNMPNY+GSVSGA+ GLLGMIPG++PGASGG ILPG+G+S
Sbjct: 188 GLLGLAPTST-FPNLVNQTMPNMPNYSGSVSGAFPGLLGMIPGIIPGASGGAILPGIGAS 246
Query: 849 LGEVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1028
LGEVCREYLNGRCAK DCK NHPP N
Sbjct: 247 LGEVCREYLNGRCAKTDCKLNHPPHNLLMTALAATTSMGTVSQVPMAPSAAAMAAAQAIV 306
Query: 1029 XXXXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYC 1208
SP+KAG+ DALKKTLQVSNLSPLLTVEQLKQLFS+C
Sbjct: 307 AAQALQAHAAQVQAQAKSGKDSSASPDKAGKDDALKKTLQVSNLSPLLTVEQLKQLFSFC 366
Query: 1209 GTVVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPV 1388
GTVV+C+ITDSKHFAYIEYSKPEEATAALALNNMDVGGRP+NVEMAKSLP KPAILN+ +
Sbjct: 367 GTVVECTITDSKHFAYIEYSKPEEATAALALNNMDVGGRPMNVEMAKSLPQKPAILNSQL 426
Query: 1389 NQSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKL 1568
SSLP +RAATMKSATELA+ARAAEIS+KL
Sbjct: 427 ASSSLPMMMQQAVAMQQMQFQQALLMQQTMMTQQAASRAATMKSATELAAARAAEISKKL 486
Query: 1569 KAEGV------GNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXX 1730
KA+G+ EEKE + K+ I Y
Sbjct: 487 KADGLVSEEKEEKEEKEAKPKSRSPSPSRKKSRSKSRSPINYHRRRRSPSYSPPSRQARD 546
Query: 1731 XXXXXXXXXXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRT 1910
H+ +Y++ERR + SR++ SRS SP
Sbjct: 547 RRSRSPIRSRHYSSYDNERRSFREIRDGGDRYRRRDSGRSRDHHVSSSRKHRSRSASPGR 606
Query: 1911 RKPSKASLASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSK 2090
RK + SPKRHRES E HR+RSRS
Sbjct: 607 RKSYRVDSVSPKRHRES---TPRRATRAGSRSPSYSRGNRSSPRIDDERKLNHRKRSRSI 663
Query: 2091 SLEGTSYHRRRSRSKSVEDTSNH--RRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQ 2264
S +G YH +R ++ + S H RRRSRS S ED+ H + K K +R+
Sbjct: 664 SPDG-KYHSNGTRDETRHERSKHRDRRRSRSVSAEDKHHRMSFARSTNETKSKHRRRSRS 722
Query: 2265 KDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEK-GESKTKKSALDV 2441
K + E +H V+ +D D ++ + S + KR SD K E++ + S DV
Sbjct: 723 K---SVEGKHRSVE--KDANRDDKSKHRGRRRSRSTSLESKRLSDGKMNETRNEDSKHDV 777
Query: 2442 NDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSK----DAR 2609
+ ++ + + + DS G R S ++K S S + + + K D R
Sbjct: 778 RRSR--SRSRSESLEDKFHFDDSVEGGRNEKSK-HHAKRRSRSRSVESNHKLKEKVDDGR 834
Query: 2610 KSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSS----------------- 2738
+ RR+ + + + + + + + + ++ KH + S
Sbjct: 835 DKRPKHRGRRRSRSVSVEAKHHRRSRSSSRSSGETKMKHSRRSGSKSPDGKNNFKDKLNE 894
Query: 2739 SEYKRHEKVESVRREKAVLDDDSREG----RKASDYSKSKSHRCSSKNSEDIGGAKDRHR 2906
+ YK+ + R ++L++ R G + +SD S+SK+ R S +SE G +H
Sbjct: 895 TRYKKSKSGRRKRSRSSLLEEKLRRGSSGSQSSSDESESKNIRRSKSDSE---GRPSKHE 951
Query: 2907 SEKRRH 2924
+ H
Sbjct: 952 APITEH 957
Score = 63.9 bits (154), Expect = 6e-07
Identities = 77/367 (20%), Positives = 144/367 (39%), Gaps = 10/367 (2%)
Frame = +3
Query: 2070 RRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKS-IEDRVHSGGKRDRSKSEKLKI 2246
R++SRSKS +YHRRR RS S S R RS+S I R +S +R +++
Sbjct: 515 RKKSRSKSRSPINYHRRR-RSPSYSPPSRQARDRRSRSPIRSRHYSSYDNERRSFREIRD 573
Query: 2247 DQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKK 2426
+++ D + H + S + ++S R S + ++
Sbjct: 574 GGDRYRRRDSGRSRDHHVSSSRKHRSRSASPGRRKSYRVDSVSPKRHRESTPRRATRAGS 633
Query: 2427 SALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSK-- 2600
+ + + + +I E L+ + ++ ++S GT DE H RSK
Sbjct: 634 RSPSYSRGNR----SSPRIDDERKLNHRKRSRSISPDGKYHSNGTR---DETRHERSKHR 686
Query: 2601 DARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSL-SKHGKSSSEYKRHEKVESVR 2777
D R+S S + ++ +++ K + +KS+ KH + R +K S
Sbjct: 687 DRRRSRSVSAEDKHHRMSFARSTNETKSKHRRRSRSKSVEGKHRSVEKDANRDDK--SKH 744
Query: 2778 REKAVLDDDSREGRKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVAEDIGS 2957
R + S E ++ SD +++ SK+ D+ ++ R RSE + + +
Sbjct: 745 RGRRRSRSTSLESKRLSDGKMNETRNEDSKH--DVRRSRSRSRSESLEDKF-HFDDSVEG 801
Query: 2958 GNFDLSETKDTPKLKS------HRSSSSAEDETTNDPKYSSRHERSELVKDNSEESRNLM 3119
G + S+ + +S H+ +D PK+ R + + R+
Sbjct: 802 GRNEKSKHHAKRRSRSRSVESNHKLKEKVDDGRDKRPKHRGRRRSRSVSVEAKHHRRSRS 861
Query: 3120 APNSSLE 3140
+ SS E
Sbjct: 862 SSRSSGE 868
>ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 564 bits (1454), Expect = e-157
Identities = 337/733 (45%), Positives = 398/733 (54%), Gaps = 36/733 (4%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
+KP+GPVDP+KC+ SSFVVVTKDSDGRK+PNGG ++V++ PGVGVG
Sbjct: 73 SKPIGPVDPSKCTAAGAGIAGGAACSASSFVVVTKDSDGRKVPNGGAQIRVRVSPGVGVG 132
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSASNA-GGLLGM 683
GSDQEG++KDQGDG+Y VTYVV KRGNYMVHV+CNGKPIMGSPFPVFFSA A GGLLG+
Sbjct: 133 GSDQEGIIKDQGDGSYTVTYVVSKRGNYMVHVECNGKPIMGSPFPVFFSAGTASGGLLGL 192
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
P + F N VNQTMPNMPNY+GSVSGA+ GLLGMIPG+VPGASGG +LPG+G+SLGEVC
Sbjct: 193 APAST-FPNLVNQTMPNMPNYSGSVSGAFPGLLGMIPGIVPGASGGAVLPGIGASLGEVC 251
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYLNGRCAK DCKFNHPP N
Sbjct: 252 REYLNGRCAKTDCKFNHPPHNLLMTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQAL 311
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
GSP+K G+ DALKKTLQVSNLSPLLTVEQLKQLFS+CGTVV+
Sbjct: 312 QAHAAQVQAQAQSAKDSAGSPDKVGKADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVE 371
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILN+P+ SL
Sbjct: 372 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSL 431
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P NRAATMKSATELASARAAEIS+KLKA+G
Sbjct: 432 PMVMQQAVAMQQMQFQQALLMQQTMTAQQAANRAATMKSATELASARAAEISKKLKADGF 491
Query: 1584 GNEEKETEIKN---XXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
EEKE + +N + Y
Sbjct: 492 VEEEKEEKEENRKSRSPSISHARSKSRSKSPLHYRRRRRSRSFSPPSRYSREHRSRSPFR 551
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
H+ ++ R + + SRRN SRS SPRTRK +A
Sbjct: 552 SHHYSIHDHGSRSYRDNKDGSDRSRRRDLDRSHDHHLSSSRRNRSRSRSPRTRKSYRADS 611
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSY- 2111
SPKR ES + S RRRSRSKS+EG Y
Sbjct: 612 ESPKRRVESSSHRTRKSSRVSPKSPRHHRGSRSSPRNDDDNKSKRRRRSRSKSVEGKHYS 671
Query: 2112 -------------HRRRSRSKSV------------------EDTSNHRRRSRSKSIEDRV 2198
HR R RS+S+ + S HR+RSRSKS E +
Sbjct: 672 NEKIDERRDKKSKHRDRRRSRSISAEGKHHKGSGFSPRSFDDSKSKHRKRSRSKSAEGKR 731
Query: 2199 HSGGKRDRSKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLST 2378
K D + EK K ++ + +AE ++ ++ +D + ++ S +
Sbjct: 732 VLSDKTDEGRDEKGKHHEKRRSR-SRSAEGKYCRLNRLSPKSSDEIRPK--HRRHSRSRS 788
Query: 2379 DDKRSSDEKGESK 2417
+ R SD KG+ K
Sbjct: 789 AEYRRSDNKGDEK 801
>emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 557 bits (1436), Expect = e-155
Identities = 330/704 (46%), Positives = 393/704 (55%), Gaps = 7/704 (0%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
+KP+GPVDP+KC+ SSFVVVTKDSDGRK+PNGG ++V++ PGVGVG
Sbjct: 73 SKPIGPVDPSKCTAAGAGIAGGAACSASSFVVVTKDSDGRKVPNGGAQIRVRVSPGVGVG 132
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSASNA-GGLLGM 683
GSDQEG++KDQGDG+Y VTYVV KRGNYMVHV+CNGKPIMGSPFPVFFSA A GGLLG+
Sbjct: 133 GSDQEGIIKDQGDGSYTVTYVVSKRGNYMVHVECNGKPIMGSPFPVFFSAGTASGGLLGL 192
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
P + F N VNQTMPNMPNY+GSVSGA+ GLLGMIPG+VPGASGG +LPG+G+SLGEVC
Sbjct: 193 APAST-FPNLVNQTMPNMPNYSGSVSGAFPGLLGMIPGIVPGASGGAVLPGIGASLGEVC 251
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYLNGRCAK DCKFNHPP N
Sbjct: 252 REYLNGRCAKTDCKFNHPPHNLLMTALAATTTMGTLSQVPMAPSAAAMAAAQAIVAAQAL 311
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
GSP+K G+ DALKKTLQVSNLSPLLTVEQLKQLFS+CGTVV+
Sbjct: 312 QAHAAQVQAQAQSAKDSAGSPDKVGKADALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVE 371
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILN+P+ SL
Sbjct: 372 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSL 431
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P NRAATMKSATELASARAAEIS+KLKA+G
Sbjct: 432 PMVMQQAVAMQQMQFQQALLMQQTMTAQQAANRAATMKSATELASARAAEISKKLKADGF 491
Query: 1584 GNEEKETEIKN---XXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
EEKE + +N + Y
Sbjct: 492 VEEEKEEKEENRKSRSPSISHARSKSRSKSPLHYRRRRRSRSFSPPSRYSREHRSRSPFR 551
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
H+ ++ R + + SRRN SRS SPRTRK +A
Sbjct: 552 SHHYSIHDHGSRSYRDNKDGSDRSRRRDLDRSHDHHLSSSRRNRSRSRSPRTRKSYRADS 611
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
SPKR ES + S HR R RS+S+ H
Sbjct: 612 ESPKRRVES---------SSHRTRKSSRHYSNEKIDERRDKKSKHRDRRRSRSISAEGKH 662
Query: 2115 RRRS--RSKSVEDT-SNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAE 2285
+ S +S +D+ S HR+RSRSKS E + K D + EK K ++ + +AE
Sbjct: 663 HKGSGFSPRSFDDSKSKHRKRSRSKSAEGKRVLSDKTDEGRDEKGKHHEKRRSR-SRSAE 721
Query: 2286 KQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESK 2417
++ ++ +D + ++ S + + R SD KG+ K
Sbjct: 722 GKYCRLNRLSPKSSDEIRPK--HRRHSRSRSAEYRRSDNKGDEK 763
>ref|XP_002518040.1| conserved hypothetical protein [Ricinus communis]
gi|223542636|gb|EEF44173.1| conserved hypothetical
protein [Ricinus communis]
Length = 946
Score = 556 bits (1432), Expect = e-155
Identities = 373/954 (39%), Positives = 479/954 (50%), Gaps = 22/954 (2%)
Frame = +3
Query: 318 FVKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGV 497
++ NKP+GPVDP KC+ S+F+V TKDSDGRK+ +GG +KVK+ PGV
Sbjct: 77 YLANKPVGPVDPTKCTAVGAGIAGGTACAPSTFMVATKDSDGRKVMHGGAQIKVKVSPGV 136
Query: 498 GVGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGL 674
GVGG++QEG+VKD GDG+Y VTYVVPKRGNYMV+++CNGKPIMGSPFPVFFSA ++ GGL
Sbjct: 137 GVGGTEQEGIVKDMGDGSYTVTYVVPKRGNYMVNIECNGKPIMGSPFPVFFSAGTSTGGL 196
Query: 675 LGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLG 854
LGM P + F N VNQTMPNMPNY+GSVSGA+ GLLGMIPG+V GASGG +LPG+G+SLG
Sbjct: 197 LGMAPAST-FPNLVNQTMPNMPNYSGSVSGAFPGLLGMIPGIVSGASGGAVLPGIGASLG 255
Query: 855 EVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1034
EVCREYLNGRCAK DCK NHPP N
Sbjct: 256 EVCREYLNGRCAKTDCKLNHPPHNLLMTALAATTSMGTLSQVPMAPSAAAMAAAQAIVAA 315
Query: 1035 XXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGT 1214
GSP+KAG+ D LKKTLQVSNLSPLLTV+QLKQLFSY G+
Sbjct: 316 QALQAHAAQVQAQAQSAKDSSGSPDKAGKEDTLKKTLQVSNLSPLLTVDQLKQLFSYFGS 375
Query: 1215 VVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQ 1394
VV+CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLP K ++LN+ V
Sbjct: 376 VVECSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPQK-SLLNSSVAS 434
Query: 1395 SSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKA 1574
SSLP NRAATMKSATELA+ARAAEIS+KLKA
Sbjct: 435 SSLPLMMQQAVAMQQMQFQQALLMQQTMTAQQAANRAATMKSATELAAARAAEISKKLKA 494
Query: 1575 EGVGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
+G +EEKETE K+ + Y
Sbjct: 495 DGFVDEEKETERKSRSPSASRVRSKSKSKSPVSY-RRRRRSPYSPPSRRHRDHRSRSPFR 553
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
H Y+ ERR S VSRRN SRSVSPR ++ +A
Sbjct: 554 SRHLSRYDIERR--SFRDSRDDSGRTRRGDRSFDRRSPVSRRNRSRSVSPRMKRSYRADS 611
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
SPKR RES S R R S + H
Sbjct: 612 GSPKRRRES---------------------------------SPRRARKSSHGGSRSPRH 638
Query: 2115 RRRSRSKSVEDTSN---HRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAE 2285
R SRS D+ N +R+RSRSKS+ED S K ++ EK K Q + E
Sbjct: 639 HRGSRSSPRNDSDNKLKYRKRSRSKSVED---SKEKAKEAQDEKFK-KQERRSRSLSVEE 694
Query: 2286 KQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKKSALDVNDTEKFDA 2465
K ++ KS+ + D+ +G S++ KS TEK +
Sbjct: 695 KNNV--------------------SKSSSRSIDENEPKHRGRSRS-KSVEARRSTEKVNE 733
Query: 2466 LQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSKDARKSEKRSD--NRR 2639
++ ++ + + + S S++ + HSR K +K+S +R+
Sbjct: 734 TRDGRLKNRDR-----------------KRSRSKSVEVRRHSREKGNESRDKKSKHRDRK 776
Query: 2640 KDKVDTSKTERNNSDKDGAHAVNKSLSKHGK-SSSEYKRHEKVESVRREKAVLDDDSREG 2816
+ + ++ + + + + SKH + S S +K+ S R + ++ R
Sbjct: 777 RSRSISADGKHHRGSRSSPRVADDIKSKHRRHSRSRSPESKKLSSYRMDGTGVEKSKRRS 836
Query: 2817 RKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVAEDIGSGNFDLSETKDTPK 2996
R+ S ++ K C S S + +K + RS R E + DI N +E
Sbjct: 837 RRRSMSAEGK--HCRSPRSSEENKSKHKRRSRSRSAEGKHHSSDI--KNIKRAENLVHEN 892
Query: 2997 LKSHRSSSSAED------ETTN--DPKYSSRHE-------RSELVKDNSEESRN 3113
SH + + ED + TN K SS+++ + +V DN +E RN
Sbjct: 893 CVSHETENVTEDQDSVVGDATNMWSNKKSSKYDDYDPEELKENMVIDNDKEMRN 946
Score = 63.9 bits (154), Expect = 6e-07
Identities = 102/456 (22%), Positives = 174/456 (38%), Gaps = 50/456 (10%)
Frame = +3
Query: 2061 SYHRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRS--------------KSIEDRV 2198
S R RS+SKS SY RRR S + RSRS +S D
Sbjct: 512 SASRVRSKSKSKSPVSYRRRRRSPYSPPSRRHRDHRSRSPFRSRHLSRYDIERRSFRDSR 571
Query: 2199 HSGGKR---DRSKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKST 2369
G+ DRS + + +RN + K+ D S K+
Sbjct: 572 DDSGRTRRGDRSFDRRSPVSRRNRSRSVSPRMKRSYRADSG-------------SPKRRR 618
Query: 2370 LSTDDKRSSDEKGESKTKKSALDVNDTEKFDA---LQNNQIHSENNLSDSSVGKRLAASP 2540
S+ + G S++ + + + D+ L+ + ++ DS + A
Sbjct: 619 ESSPRRARKSSHGGSRSPRHHRGSRSSPRNDSDNKLKYRKRSRSKSVEDSKEKAKEAQDE 678
Query: 2541 VFYS---KGTSTSLDEQPH-----SRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGA 2696
F + S S++E+ + SRS D + + R +R K TE+ N +DG
Sbjct: 679 KFKKQERRSRSLSVEEKNNVSKSSSRSIDENEPKHRGRSRSKSVEARRSTEKVNETRDG- 737
Query: 2697 HAVNKSLSKHGKSSSEYKRH--EKVESVRREKAVLDDDSREGRKASDYSKSKSHRCSSKN 2870
N+ + S E +RH EK R +K+ D R ++D + R S +
Sbjct: 738 RLKNRDRKRSRSKSVEVRRHSREKGNESRDKKSKHRDRKRSRSISADGKHHRGSRSSPRV 797
Query: 2871 SEDIGGAKDRHRSEKRRHEITSVAEDIGSGNFDLSET-KDTPKLKSHRSSSSAEDETTND 3047
++DI +S+ RRH + E ++ + T + K +S R S SAE +
Sbjct: 798 ADDI-------KSKHRRHSRSRSPESKKLSSYRMDGTGVEKSKRRSRRRSMSAEGKHCRS 850
Query: 3048 PKYS----SRHE-----RSELVKDNSEESRNLMAPNSSLEK--IQERVSSFSVEEAFV-- 3188
P+ S S+H+ RS K +S + +N+ + + + + + + ++ V
Sbjct: 851 PRSSEENKSKHKRRSRSRSAEGKHHSSDIKNIKRAENLVHENCVSHETENVTEDQDSVVG 910
Query: 3189 DANDRGQYGRSRVYSD------KFDMFTDQDNDTDN 3278
DA + +S Y D K +M D D + N
Sbjct: 911 DATNMWSNKKSSKYDDYDPEELKENMVIDNDKEMRN 946
>ref|XP_002300152.2| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|550348720|gb|EEE84957.2| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 918
Score = 533 bits (1372), Expect = e-148
Identities = 354/879 (40%), Positives = 445/879 (50%), Gaps = 35/879 (3%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVDP KC+ ++FVVVTKD+DGRK+PNGG ++V++ PGVGVG
Sbjct: 79 NKPVGPVDPGKCTAAGAGIAGGTACAPATFVVVTKDADGRKVPNGGAVIRVRVSPGVGVG 138
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGM 683
G++QEG VKD GDGTY VTYVVPKRGNYMV ++CNGK IMGSPFPVFFSA ++ GGLLGM
Sbjct: 139 GTEQEGAVKDMGDGTYTVTYVVPKRGNYMVTIECNGKAIMGSPFPVFFSAGTSTGGLLGM 198
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
PTT F N VNQTMPNMPNY+ SVSGA+ LGM PG+ GASGG ILPGVG+SLGEVC
Sbjct: 199 APTTT-FPNLVNQTMPNMPNYSASVSGAFPAFLGMTPGIASGASGGAILPGVGASLGEVC 257
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYL GRCAK DCK HPP +
Sbjct: 258 REYLYGRCAKMDCKLGHPPHSLLMTLLAPTTTMGTLSHAPMAPSAAAMAAAQAIVAAKAL 317
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
GSP+KA + DALKKTL VSNLSPLLTVEQLKQLFS+CGTVV+
Sbjct: 318 QAHAAQVQAQAQSAKDSSGSPDKARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVE 377
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
C+I DSKH AYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLP KP +LN+ + SSL
Sbjct: 378 CAIADSKHSAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPQKP-LLNSSLASSSL 436
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P N+AA+MKSATELA+ARAAEIS+KLKA+G
Sbjct: 437 PMMMQQAVAMQQMQFQQALIMQQTMTAQQAANKAASMKSATELAAARAAEISKKLKADGF 496
Query: 1584 GNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 1763
E+ET+ + I Y +
Sbjct: 497 VIGEEETKAETKSPSPPQARSRSKSRSPINYQRRLRSPSYSPPSRRNRDRRSRSPFRFRY 556
Query: 1764 HKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASLASP 1943
H Y RR + +S VSRR+ SRS SPRTRK + SP
Sbjct: 557 HSRYNYGRRSYRDSRDIVDRMRMQDSDRSRGRHSPVSRRSRSRSASPRTRKSYRDDSGSP 616
Query: 1944 KRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRR--RSRSKSLEGTS--- 2108
KR ES + ++R RSRSKS+E ++
Sbjct: 617 KRRLESSAQRSRKAADSGSRSPRSHGGRRLSRRNITDSKLRYKRHSRSRSKSVEESNDRV 676
Query: 2109 ---------YHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNH 2261
H RRSRS SVE + RR S S ED R RS+S+ +++ + ++
Sbjct: 677 NEIQDKKSKQHERRSRSLSVELKHHGRRPSHRSSDED---ESNHRSRSRSKSVEVKRHSY 733
Query: 2262 QKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKG-ESKTKKSALD 2438
+K +T +D R D ++ + S DD+ E+G ES+ KK
Sbjct: 734 EKVGKT--------EDGRLKHRD--------RRSRSKSVDDRHCYKERGNESRDKK---- 773
Query: 2439 VNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSR-SKDARKS 2615
T+ D +Q+ I +E+N +R +SP KG S + H R S+
Sbjct: 774 ---TKHRDRVQSRSISAESNHH-----RRSRSSP----KGRDES--KSKHRRHSRPISPE 819
Query: 2616 EKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKS---------SSEYKRHEKVE 2768
KR N R D+ + R + +G H + S+ KS S+E+KRH E
Sbjct: 820 GKRRSNHRIDEKSKHCSRRRSVSAEGKHIRSPRSSEENKSKRRRHSRSKSAEHKRHSNDE 879
Query: 2769 SVRREK---------AVLDDDSREGRKASDYSKSKSHRC 2858
++RE+ +D + + +D KS + C
Sbjct: 880 EIKREENETRHEHTSDKTEDANEDENSFTDKEKSSFYYC 918
>ref|XP_004296963.1| PREDICTED: uncharacterized protein LOC101297633 [Fragaria vesca
subsp. vesca]
Length = 1040
Score = 532 bits (1371), Expect = e-148
Identities = 356/870 (40%), Positives = 447/870 (51%), Gaps = 19/870 (2%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVD KC+ SSF V TKDSDGRK+PNGG +KVKI PG+GVG
Sbjct: 68 NKPIGPVDATKCTAAGAGIAGGTACAPSSFTVATKDSDGRKVPNGGAQIKVKIMPGLGVG 127
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA--SNAGGLLG 680
GS+QEGMVKD GDGTY VTYVVPKRGNYMV ++CNG+ IMGSPFPVFFSA ++ GGLLG
Sbjct: 128 GSEQEGMVKDMGDGTYTVTYVVPKRGNYMVTIECNGRAIMGSPFPVFFSAGSTSTGGLLG 187
Query: 681 MPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEV 860
+ PT+ F N VNQTMPNMPNY+GSVSGA+ GLLGMIPG+VPGA GG ILPG+G+SLGEV
Sbjct: 188 LAPTST-FPNLVNQTMPNMPNYSGSVSGAFPGLLGMIPGIVPGALGGAILPGIGASLGEV 246
Query: 861 CREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1040
CREYLNGRCAK DCK NH P +
Sbjct: 247 CREYLNGRCAKADCKLNH-PPHQLLMTALAATTNMGNVSQVPMAPSAAAMAAAQAIVAAQ 305
Query: 1041 XXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVV 1220
GSP+KAG+ D LK+TLQVSNLSPLLTVEQLKQLFS+CGTVV
Sbjct: 306 ALQAHAAQHAQAQSNKDSSGSPDKAGKADVLKRTLQVSNLSPLLTVEQLKQLFSFCGTVV 365
Query: 1221 DCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSS 1400
+C+ITDSKHFAYIEY+KPEEATAALALN+MDVGGRPLNVEMAKSLP K A +N+ + SS
Sbjct: 366 ECTITDSKHFAYIEYTKPEEATAALALNSMDVGGRPLNVEMAKSLPQKSA-MNSQMASSS 424
Query: 1401 LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEG 1580
LP NRAATMK+ATELA+ARAAEIS+KLKA+G
Sbjct: 425 LPMVMQQAVAMQQMQFQQALLMQQTMTAQQAANRAATMKTATELAAARAAEISKKLKADG 484
Query: 1581 VGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1760
V EE ET+ K I Y
Sbjct: 485 VEIEETETKEKT-RSPSPRARSKSRSRSPINYRRRWKSPSYSPPPRYARGRRSRSPFRSR 543
Query: 1761 HHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASLAS 1940
HH Y++ RR + S SRR SRSVSPR RK + +S
Sbjct: 544 HHSIYDNGRRSY---RDFRNGSDRGRRRDSDDFQSYASRRR-SRSVSPR-RKSHRVDSSS 598
Query: 1941 PKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEG------ 2102
PK RE E S HR+RSRS S E
Sbjct: 599 PKHRRE----RSPRRATRDASRSPGHYTGSKLSPRGDEDKSKHRKRSRSNSPEDKHLLND 654
Query: 2103 --------TSYHRRRSRSKSVE-DTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQR 2255
TS HR R RS+SV + +HR+RS +S+++ +R RSKS ++K
Sbjct: 655 KKDETRYETSKHRERRRSRSVSVEGKHHRKRSSPRSLDENKSKHRRRSRSKSVEVK---- 710
Query: 2256 NHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKKSAL 2435
+ DET +++ + R + L S S +K++ D+K ++ S++ KS
Sbjct: 711 -PRGADETRDRK-LKHRSGRQSRSKSLESKRHSDEKTSELRDEKSKHRDRRRSRS-KSVE 767
Query: 2436 DVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTST--SLDEQPHSRSKDAR 2609
+++ D ++ + + S + + P ++G S+ LDE +SK R
Sbjct: 768 GRRHSKEVDGGRDKKSKRRDRRQSRSRSRSSSLEPKLDTRGESSPRRLDEH---KSKHRR 824
Query: 2610 KSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVESVRREKA 2789
+S +S ++ D + RN K ++S+ S E +RH R
Sbjct: 825 RSRSKSAEGKQHLNDRADKSRNEKAKRHRRRRSRSI------SLERERHRGSRLSPRSSD 878
Query: 2790 VLDDDSREGRKASDYSKSKSHRCSSKNSED 2879
D R R S+ S+ K R + D
Sbjct: 879 ENDSKQRRRRSRSESSEGKHQRSERDENGD 908
Score = 75.5 bits (184), Expect = 2e-10
Identities = 99/399 (24%), Positives = 168/399 (42%), Gaps = 23/399 (5%)
Frame = +3
Query: 2064 YHRRRSRSKSL-EGTSYHRRRSRSKSVE------DTSNHR-------RRSRSKSIEDRVH 2201
+HR+RS +SL E S HRRRSRSKSVE D + R R+SRSKS+E + H
Sbjct: 681 HHRKRSSPRSLDENKSKHRRRSRSKSVEVKPRGADETRDRKLKHRSGRQSRSKSLESKRH 740
Query: 2202 SGGKRDRSKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTD 2381
S K + EK K R + ++H DGG D KKS
Sbjct: 741 SDEKTSELRDEKSKHRDRRRSRSKSVEGRRH---SKEVDGGRD---------KKS--KRR 786
Query: 2382 DKRSSDEKGESKTKKSALDVNDTEKFDAL-QNNQIHSENNLSDSSVGKRLAASPVFYSKG 2558
D+R S + S + + LD L ++ H + S S+ GK +
Sbjct: 787 DRRQSRSRSRSSSLEPKLDTRGESSPRRLDEHKSKHRRRSRSKSAEGK----------QH 836
Query: 2559 TSTSLDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSS 2738
+ D+ + ++K R+ RS + +++ S+ +SD++ + + S+ S
Sbjct: 837 LNDRADKSRNEKAKRHRRRRSRSISLERERHRGSRLSPRSSDENDSKQ-RRRRSRSESSE 895
Query: 2739 SEYKRHEKVESVRREKAVLDDDSREGRKASDYSKSKSHR---CSSKNSEDIGGAKDRHRS 2909
+++R E+ E+ E +D + E ++YS K + S+K + G
Sbjct: 896 GKHQRSERDENGDDELKHYEDGNEESGFLTNYSTKKHNDQMVISNKEEFALNG------- 948
Query: 2910 EKRRHEITSVAEDIGSGNFDLSETKDTPKLKSHRSS-SSAEDETTNDPKYSSRHERS--- 3077
S+ G G +D+ +++ P L++ R S E+ + +Y S H++S
Sbjct: 949 --------SLGRLDGRGVYDV-DSEGGPALQTCRDELSRHENLGKSGLEYHSDHDKSANE 999
Query: 3078 -ELVKDNSEESRNLMAPNSSLEKIQERVSSFSVEEAFVD 3191
++ + S + N M K ++R S S + F D
Sbjct: 1000 DDVYRAGSRKDYNKM-------KSRDRSSLMSKADMFSD 1031
>ref|XP_006373080.1| hypothetical protein POPTR_0017s08510g [Populus trichocarpa]
gi|550319786|gb|ERP50877.1| hypothetical protein
POPTR_0017s08510g [Populus trichocarpa]
Length = 924
Score = 532 bits (1370), Expect = e-148
Identities = 349/895 (38%), Positives = 440/895 (49%), Gaps = 44/895 (4%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVDP KC+ ++F+VVTKD+DGRK+PNGG +KV++ PGVGVG
Sbjct: 53 NKPVGPVDPNKCTAAGGGIAGGTACAPATFMVVTKDADGRKVPNGGAVIKVRVSPGVGVG 112
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGM 683
G++QEG VKD GDGTY VTYVVPKRGNYMV ++CNGK IMGSPFPVFFSA ++ GGLLGM
Sbjct: 113 GTEQEGNVKDMGDGTYTVTYVVPKRGNYMVTIECNGKAIMGSPFPVFFSAGTSTGGLLGM 172
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
PTT F N VNQTMPNMPNY+ ++SGA+ LLGM PG+ ASGG ILPG G+SLGEVC
Sbjct: 173 APTTT-FPNLVNQTMPNMPNYSANISGAFPALLGMTPGITSSASGGAILPGAGASLGEVC 231
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYL GRCAK DCK +HPPQ+
Sbjct: 232 REYLYGRCAKTDCKLSHPPQSLLMTLLAPTTSMGTLSQVPMAPSAAAMAAAQAIVAAKAL 291
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
GSP+KA + DALKKTL VSNLSPLLTVEQLKQLFS+CGTVV+
Sbjct: 292 QAHAAQLQAQARSAKDSSGSPDKARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVE 351
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
C+I DSKH AYIEYSKPEEATAALALNNMDVGGRPLNVE AKSLP KP ILN+ SSL
Sbjct: 352 CTIADSKHSAYIEYSKPEEATAALALNNMDVGGRPLNVETAKSLPQKP-ILNSSFASSSL 410
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P N+AATMKSATELA+ARAAEIS+KLK +G+
Sbjct: 411 PMMMQQAVAMQQMQFQQALLMQQTMTAQQAANKAATMKSATELAAARAAEISKKLKDDGL 470
Query: 1584 GNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 1763
E ET+ ++ I Y +
Sbjct: 471 VTGEGETKAESKSPPPPRARSRSKSRSPINYRRRMRSPSYSPPSRHNRDRRSRSPVRFRY 530
Query: 1764 HKNYESERRYH--XXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASLA 1937
H Y ERR + +S VSRRN SRS SPRTRK +A
Sbjct: 531 HSRYNYERRSYRDRDSRDDGDRTRRRELDRSRDHHSPVSRRNRSRSASPRTRKSYRADSG 590
Query: 1938 SPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSL------- 2096
SPK +ES + +RRRSRS+S
Sbjct: 591 SPKHRQESSAHRSRKASDSGSRSPRHHGGSRSSPRNNPDSKLRYRRRSRSRSKSVEEANE 650
Query: 2097 -------EGTSYHRRRSRSKSV---------------EDTSNHRRRSRSKSIEDRVHSGG 2210
+ + H RRSRS SV ED S HR RSRSKS+E + HS
Sbjct: 651 KVDEIREKKSKQHERRSRSLSVELKHHGRRPSPRSSNEDDSKHRSRSRSKSVEVKRHSNE 710
Query: 2211 KRDRSKSEKLK----------IDQRNHQKD--DETAEKQHIGVDDSRDGGTDVLGSSALS 2354
K D++ KLK +D R+H K+ +ET +K+ D R S +
Sbjct: 711 KVDKTGDGKLKHRHRRSRSKSVDDRHHYKERGNETRDKKTKHQDRGR-------SRSITA 763
Query: 2355 QKKSTLSTDDKRSSDEKGESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAA 2534
+ K S R D +SK ++ + ++ K + + + N + S +
Sbjct: 764 EGKHHRSRSSPRGRD-GSKSKHRRHSRSISPEGK----RRSSHRVDQNKDEKSKHRHRRR 818
Query: 2535 SPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKS 2714
SP K H RS + + K RR + +N +KD N++
Sbjct: 819 SPSAEGK----------HGRSPRSSEENKSKHRRRPRSKSAERKRHSNDEKDIRRGENET 868
Query: 2715 LSKHGKSSSEYKRHEKVESVRREKAVLDDDSREGRKASDYSKSKSHRCSSKNSED 2879
+HG +E EK + E L + ++ + + S+ + ++E+
Sbjct: 869 HHEHGSDKTEDANEEKKYFMNEEMVDLKHKGCDSKELVEDMVTGSNGLPNSSNEE 923
>ref|XP_006373079.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|550319785|gb|ERP50876.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 950
Score = 532 bits (1370), Expect = e-148
Identities = 349/895 (38%), Positives = 440/895 (49%), Gaps = 44/895 (4%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVDP KC+ ++F+VVTKD+DGRK+PNGG +KV++ PGVGVG
Sbjct: 79 NKPVGPVDPNKCTAAGGGIAGGTACAPATFMVVTKDADGRKVPNGGAVIKVRVSPGVGVG 138
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGM 683
G++QEG VKD GDGTY VTYVVPKRGNYMV ++CNGK IMGSPFPVFFSA ++ GGLLGM
Sbjct: 139 GTEQEGNVKDMGDGTYTVTYVVPKRGNYMVTIECNGKAIMGSPFPVFFSAGTSTGGLLGM 198
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
PTT F N VNQTMPNMPNY+ ++SGA+ LLGM PG+ ASGG ILPG G+SLGEVC
Sbjct: 199 APTTT-FPNLVNQTMPNMPNYSANISGAFPALLGMTPGITSSASGGAILPGAGASLGEVC 257
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYL GRCAK DCK +HPPQ+
Sbjct: 258 REYLYGRCAKTDCKLSHPPQSLLMTLLAPTTSMGTLSQVPMAPSAAAMAAAQAIVAAKAL 317
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
GSP+KA + DALKKTL VSNLSPLLTVEQLKQLFS+CGTVV+
Sbjct: 318 QAHAAQLQAQARSAKDSSGSPDKARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVE 377
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
C+I DSKH AYIEYSKPEEATAALALNNMDVGGRPLNVE AKSLP KP ILN+ SSL
Sbjct: 378 CTIADSKHSAYIEYSKPEEATAALALNNMDVGGRPLNVETAKSLPQKP-ILNSSFASSSL 436
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P N+AATMKSATELA+ARAAEIS+KLK +G+
Sbjct: 437 PMMMQQAVAMQQMQFQQALLMQQTMTAQQAANKAATMKSATELAAARAAEISKKLKDDGL 496
Query: 1584 GNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXH 1763
E ET+ ++ I Y +
Sbjct: 497 VTGEGETKAESKSPPPPRARSRSKSRSPINYRRRMRSPSYSPPSRHNRDRRSRSPVRFRY 556
Query: 1764 HKNYESERRYH--XXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASLA 1937
H Y ERR + +S VSRRN SRS SPRTRK +A
Sbjct: 557 HSRYNYERRSYRDRDSRDDGDRTRRRELDRSRDHHSPVSRRNRSRSASPRTRKSYRADSG 616
Query: 1938 SPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSL------- 2096
SPK +ES + +RRRSRS+S
Sbjct: 617 SPKHRQESSAHRSRKASDSGSRSPRHHGGSRSSPRNNPDSKLRYRRRSRSRSKSVEEANE 676
Query: 2097 -------EGTSYHRRRSRSKSV---------------EDTSNHRRRSRSKSIEDRVHSGG 2210
+ + H RRSRS SV ED S HR RSRSKS+E + HS
Sbjct: 677 KVDEIREKKSKQHERRSRSLSVELKHHGRRPSPRSSNEDDSKHRSRSRSKSVEVKRHSNE 736
Query: 2211 KRDRSKSEKLK----------IDQRNHQKD--DETAEKQHIGVDDSRDGGTDVLGSSALS 2354
K D++ KLK +D R+H K+ +ET +K+ D R S +
Sbjct: 737 KVDKTGDGKLKHRHRRSRSKSVDDRHHYKERGNETRDKKTKHQDRGR-------SRSITA 789
Query: 2355 QKKSTLSTDDKRSSDEKGESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAA 2534
+ K S R D +SK ++ + ++ K + + + N + S +
Sbjct: 790 EGKHHRSRSSPRGRD-GSKSKHRRHSRSISPEGK----RRSSHRVDQNKDEKSKHRHRRR 844
Query: 2535 SPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKS 2714
SP K H RS + + K RR + +N +KD N++
Sbjct: 845 SPSAEGK----------HGRSPRSSEENKSKHRRRPRSKSAERKRHSNDEKDIRRGENET 894
Query: 2715 LSKHGKSSSEYKRHEKVESVRREKAVLDDDSREGRKASDYSKSKSHRCSSKNSED 2879
+HG +E EK + E L + ++ + + S+ + ++E+
Sbjct: 895 HHEHGSDKTEDANEEKKYFMNEEMVDLKHKGCDSKELVEDMVTGSNGLPNSSNEE 949
>ref|XP_007034240.1| RNA recognition motif-containing protein isoform 1 [Theobroma cacao]
gi|590656339|ref|XP_007034242.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|590656342|ref|XP_007034243.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|590656345|ref|XP_007034244.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|590656349|ref|XP_007034245.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|590656352|ref|XP_007034246.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|508713269|gb|EOY05166.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|508713271|gb|EOY05168.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|508713272|gb|EOY05169.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|508713273|gb|EOY05170.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|508713274|gb|EOY05171.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
gi|508713275|gb|EOY05172.1| RNA recognition
motif-containing protein isoform 1 [Theobroma cacao]
Length = 965
Score = 530 bits (1366), Expect = e-147
Identities = 357/919 (38%), Positives = 448/919 (48%), Gaps = 68/919 (7%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVDPAKC S+F+VVTKD+DGRK+ +GG +KVK+ PGVGVG
Sbjct: 68 NKPIGPVDPAKCMAAGPGIAGGTACAASTFMVVTKDADGRKVQSGGAQIKVKVSPGVGVG 127
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGM 683
GS+QEG+VKD GDGTY VTYVVPKRGNYMV+++CNGKPIMGSPFPVFFSA ++ GGLLG+
Sbjct: 128 GSEQEGIVKDMGDGTYTVTYVVPKRGNYMVNIECNGKPIMGSPFPVFFSAGTSTGGLLGV 187
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
P + + N VNQTMPNMPNY GSVSGA+ GLLGMIPG+V GASGG ILPG+G+SLGEVC
Sbjct: 188 APAST-YPNLVNQTMPNMPNYTGSVSGAFPGLLGMIPGIVSGASGGAILPGMGASLGEVC 246
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYLNGRCAK DCK NHPP N
Sbjct: 247 REYLNGRCAKTDCKLNHPPHNLLMTALAATTSMGTLSQVPMAPSAAAMAAAQAIVAAQAL 306
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
SP+KAG+ DALKKTLQVSNLSPLLT EQLKQLFS+CGTVV+
Sbjct: 307 QAHAAQVQAQAQSTKDSSDSPDKAGKADALKKTLQVSNLSPLLTAEQLKQLFSFCGTVVE 366
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
C+ITDSKHFAYIEYSKPEEATAALALNNMD+GGRPLNVEMAKSLP KPA+ + + SSL
Sbjct: 367 CTITDSKHFAYIEYSKPEEATAALALNNMDIGGRPLNVEMAKSLPQKPAV--SSLASSSL 424
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P NRAA+MKSATELA+ARAAEIS+KLKA+G+
Sbjct: 425 PMMMQQAVAMQQMQFQQALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGL 484
Query: 1584 GNE----------------------------EKETEIKNXXXXXXXXXXXXXXXXXIKYX 1679
E ++ + K+ I Y
Sbjct: 485 VTEEKETKSKSRSPSTSRARSRSKSKSPLSYQRRSRSKSRSPINYRRRSRSKSRSPISYR 544
Query: 1680 XXXXXXXXXXXXXXXXXXXXXXXXXXXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXX 1859
H Y+SERR +
Sbjct: 545 RRRRSRSYSPSLRFQRDRRSKSPVRSHHRSRYDSERRSYRDRDDIDRSKRRDLDRSRDRR 604
Query: 1860 YSLVSRRNGSRSVSPRTRKPSKASLASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXX 2039
S VSRRN SRS+SP+TRK SPK RES
Sbjct: 605 SS-VSRRNRSRSISPQTRKSPPVDSDSPKNSRESSPRVRKSSHPDSRSPRHHRRSRSSPK 663
Query: 2040 XXXXEGTSYH--------------------------RRRSRSKSLEGTSYHRRRSRSKSV 2141
Y RRRSRS SLEG R RS + S
Sbjct: 664 NDDERKLKYRKRSRSKSVDSDKKRDQIQGEKSKHRSRRRSRSLSLEGEHRGRSRSSASSD 723
Query: 2142 EDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDG 2321
E+ HRRRSRS S+E +V S K D K ++ + R + +AE +H +
Sbjct: 724 ENKLKHRRRSRSVSVERKVRSNSKIDEMKKDESRHSDRRRSRSG-SAEGRHYTKE----- 777
Query: 2322 GTDVLGSSALSQKKSTLSTDDKRSSDEKGESK-TKKSALDVNDTEKFDALQNNQIHSENN 2498
S S+ K + D +RS E K ++S L +++ N H +
Sbjct: 778 ------RSDRSRDKKSKHRDRRRSRSRSAEGKHHRESRLFPRNSD-----GNKIKHRRLS 826
Query: 2499 LSDSSVGKRLAASPV-----FYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDKVDTSK 2663
S S+ GK ++ + + + +S + + S+ + +S + +D+RR+ + +
Sbjct: 827 RSKSTEGKHRSSDKIDERSKRHDRKHLSSAECRHPRGSRSSPRSSEDNDSRRRRRSRSKS 886
Query: 2664 TERNN-------SDKDGAHAVNKSLSKHGKSSSEYKRHEKVESVRREKAVLDDDSREGRK 2822
E N+ D D +VN GK ++ E + R LD D +
Sbjct: 887 VEGNDGILASKEEDYDSKVSVNDDQELKGKYLLQFSCDEGLSPNNR----LDADELSKLE 942
Query: 2823 ASDYSKSKSHRCSSKNSED 2879
S S H+ +S SE+
Sbjct: 943 GS----SSKHQLNSNGSEN 957
Score = 75.9 bits (185), Expect = 2e-10
Identities = 114/468 (24%), Positives = 178/468 (38%), Gaps = 48/468 (10%)
Frame = +3
Query: 2061 SYHRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKL 2240
S R RSRSKS SY +RRSRSKS N+RRRSRSKS + +R RS S L
Sbjct: 499 STSRARSRSKSKSPLSY-QRRSRSKS-RSPINYRRRSRSKSRSPISYRRRRRSRSYSPSL 556
Query: 2241 KIDQ--------RNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSS 2396
+ + R+H + +E++ D D L + + S+ +R+
Sbjct: 557 RFQRDRRSKSPVRSHHRSRYDSERRSYRDRDDIDRSK----RRDLDRSRDRRSSVSRRNR 612
Query: 2397 DEKGESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSV--GKRLAASPVFYSKGTSTS 2570
+T+KS +D+ K + ++ ++ S +R +SP
Sbjct: 613 SRSISPQTRKSPPVDSDSPKNSRESSPRVRKSSHPDSRSPRHHRRSRSSP---KNDDERK 669
Query: 2571 LDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYK 2750
L + SRSK +KR + + S+ + +G H + S+ SS E K
Sbjct: 670 LKYRKRSRSKSVDSDKKRDQIQGEKSKHRSRRRSRSLSLEGEH---RGRSRSSASSDENK 726
Query: 2751 -------RHEKVESVRREKAVLDDDSREGRKASD-------------YSKSKSHRCSSKN 2870
R VE R + +D+ ++ + SD Y+K +S R K
Sbjct: 727 LKHRRRSRSVSVERKVRSNSKIDEMKKDESRHSDRRRSRSGSAEGRHYTKERSDRSRDKK 786
Query: 2871 SEDIGGAKDRHRS-EKRRHEITSVAEDIGSGN----FDLSETKDTPKLKSHRSSSSAEDE 3035
S+ + R RS E + H + + GN LS +K T HRSS ++
Sbjct: 787 SKHRDRRRSRSRSAEGKHHRESRLFPRNSDGNKIKHRRLSRSKSTE--GKHRSSDKIDER 844
Query: 3036 TTNDPKYSSRHERSELVKDNSEESRNLMAPNSSLEKIQERVSSFSVEEAFVDANDRGQYG 3215
S RH+R L R + S E R S ++ V+ ND
Sbjct: 845 -------SKRHDRKHLSSAECRHPRGSRSSPRSSEDNDSRRRRRSRSKS-VEGNDGILAS 896
Query: 3216 RSRVYSDKFDMFTDQ-------------DNDTDNKKFVEDELANMEKS 3320
+ Y K + DQ + + N + DEL+ +E S
Sbjct: 897 KEEDYDSKVSVNDDQELKGKYLLQFSCDEGLSPNNRLDADELSKLEGS 944
>ref|XP_007034241.1| RNA recognition motif-containing protein isoform 2 [Theobroma cacao]
gi|508713270|gb|EOY05167.1| RNA recognition
motif-containing protein isoform 2 [Theobroma cacao]
Length = 890
Score = 524 bits (1349), Expect = e-145
Identities = 340/834 (40%), Positives = 411/834 (49%), Gaps = 62/834 (7%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVDPAKC S+F+VVTKD+DGRK+ +GG +KVK+ PGVGVG
Sbjct: 68 NKPIGPVDPAKCMAAGPGIAGGTACAASTFMVVTKDADGRKVQSGGAQIKVKVSPGVGVG 127
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGM 683
GS+QEG+VKD GDGTY VTYVVPKRGNYMV+++CNGKPIMGSPFPVFFSA ++ GGLLG+
Sbjct: 128 GSEQEGIVKDMGDGTYTVTYVVPKRGNYMVNIECNGKPIMGSPFPVFFSAGTSTGGLLGV 187
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
P + + N VNQTMPNMPNY GSVSGA+ GLLGMIPG+V GASGG ILPG+G+SLGEVC
Sbjct: 188 APAST-YPNLVNQTMPNMPNYTGSVSGAFPGLLGMIPGIVSGASGGAILPGMGASLGEVC 246
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYLNGRCAK DCK NHPP N
Sbjct: 247 REYLNGRCAKTDCKLNHPPHNLLMTALAATTSMGTLSQVPMAPSAAAMAAAQAIVAAQAL 306
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
SP+KAG+ DALKKTLQVSNLSPLLT EQLKQLFS+CGTVV+
Sbjct: 307 QAHAAQVQAQAQSTKDSSDSPDKAGKADALKKTLQVSNLSPLLTAEQLKQLFSFCGTVVE 366
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
C+ITDSKHFAYIEYSKPEEATAALALNNMD+GGRPLNVEMAKSLP KPA+ + + SSL
Sbjct: 367 CTITDSKHFAYIEYSKPEEATAALALNNMDIGGRPLNVEMAKSLPQKPAV--SSLASSSL 424
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P NRAA+MKSATELA+ARAAEIS+KLKA+G+
Sbjct: 425 PMMMQQAVAMQQMQFQQALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLKADGL 484
Query: 1584 GNE----------------------------EKETEIKNXXXXXXXXXXXXXXXXXIKYX 1679
E ++ + K+ I Y
Sbjct: 485 VTEEKETKSKSRSPSTSRARSRSKSKSPLSYQRRSRSKSRSPINYRRRSRSKSRSPISYR 544
Query: 1680 XXXXXXXXXXXXXXXXXXXXXXXXXXXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXX 1859
H Y+SERR +
Sbjct: 545 RRRRSRSYSPSLRFQRDRRSKSPVRSHHRSRYDSERRSYRDRDDIDRSKRRDLDRSRDRR 604
Query: 1860 YSLVSRRNGSRSVSPRTRKPSKASLASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXX 2039
S VSRRN SRS+SP+TRK SPK RES
Sbjct: 605 SS-VSRRNRSRSISPQTRKSPPVDSDSPKNSRESSPRVRKSSHPDSRSPRHHRRSRSSPK 663
Query: 2040 XXXXEGTSYH--------------------------RRRSRSKSLEGTSYHRRRSRSKSV 2141
Y RRRSRS SLEG R RS + S
Sbjct: 664 NDDERKLKYRKRSRSKSVDSDKKRDQIQGEKSKHRSRRRSRSLSLEGEHRGRSRSSASSD 723
Query: 2142 EDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDG 2321
E+ HRRRSRS S+E +V S K D K ++ + R + +AE +H +
Sbjct: 724 ENKLKHRRRSRSVSVERKVRSNSKIDEMKKDESRHSDRRRSRSG-SAEGRHYTKE----- 777
Query: 2322 GTDVLGSSALSQKKSTLSTDDKRSSDEKGESK-TKKSALDVNDTEKFDALQNNQIHSENN 2498
S S+ K + D +RS E K ++S L +++ N H +
Sbjct: 778 ------RSDRSRDKKSKHRDRRRSRSRSAEGKHHRESRLFPRNSD-----GNKIKHRRLS 826
Query: 2499 LSDSSVGKRLAASPV------FYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRK 2642
S S+ GK ++ + K S++ P R SE RR+
Sbjct: 827 RSKSTEGKHRSSDKIDERSKRHDRKHLSSAECRHPRGSRSSPRSSEDNDSRRRR 880
Score = 72.0 bits (175), Expect = 2e-09
Identities = 101/393 (25%), Positives = 156/393 (39%), Gaps = 35/393 (8%)
Frame = +3
Query: 2061 SYHRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKL 2240
S R RSRSKS SY +RRSRSKS N+RRRSRSKS + +R RS S L
Sbjct: 499 STSRARSRSKSKSPLSY-QRRSRSKS-RSPINYRRRSRSKSRSPISYRRRRRSRSYSPSL 556
Query: 2241 KIDQ--------RNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSS 2396
+ + R+H + +E++ D D L + + S+ +R+
Sbjct: 557 RFQRDRRSKSPVRSHHRSRYDSERRSYRDRDDIDRSK----RRDLDRSRDRRSSVSRRNR 612
Query: 2397 DEKGESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSV--GKRLAASPVFYSKGTSTS 2570
+T+KS +D+ K + ++ ++ S +R +SP
Sbjct: 613 SRSISPQTRKSPPVDSDSPKNSRESSPRVRKSSHPDSRSPRHHRRSRSSP---KNDDERK 669
Query: 2571 LDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYK 2750
L + SRSK +KR + + S+ + +G H + S+ SS E K
Sbjct: 670 LKYRKRSRSKSVDSDKKRDQIQGEKSKHRSRRRSRSLSLEGEH---RGRSRSSASSDENK 726
Query: 2751 -------RHEKVESVRREKAVLDDDSREGRKASD-------------YSKSKSHRCSSKN 2870
R VE R + +D+ ++ + SD Y+K +S R K
Sbjct: 727 LKHRRRSRSVSVERKVRSNSKIDEMKKDESRHSDRRRSRSGSAEGRHYTKERSDRSRDKK 786
Query: 2871 SEDIGGAKDRHRS-EKRRHEITSVAEDIGSGN----FDLSETKDTPKLKSHRSSSSAEDE 3035
S+ + R RS E + H + + GN LS +K T HRSS ++
Sbjct: 787 SKHRDRRRSRSRSAEGKHHRESRLFPRNSDGNKIKHRRLSRSKSTE--GKHRSSDKIDER 844
Query: 3036 TTNDPKYSSRHERSELVKDNSEESRNLMAPNSS 3134
S RH+R L +S E R+ SS
Sbjct: 845 -------SKRHDRKHL---SSAECRHPRGSRSS 867
>ref|XP_007224346.1| hypothetical protein PRUPE_ppa020677mg, partial [Prunus persica]
gi|462421282|gb|EMJ25545.1| hypothetical protein
PRUPE_ppa020677mg, partial [Prunus persica]
Length = 764
Score = 523 bits (1347), Expect = e-145
Identities = 325/727 (44%), Positives = 382/727 (52%), Gaps = 34/727 (4%)
Frame = +3
Query: 327 NKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVG 506
NKP+GPVDPAKC+ SSF+VVTKDSDGRK+P+GGV +KVK+ PGVGVG
Sbjct: 67 NKPIGPVDPAKCTAAGAGIAGGTACAPSSFMVVTKDSDGRKVPHGGVQIKVKVIPGVGVG 126
Query: 507 GSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGM 683
GS+QEGMVKD GDGTY VTYVVPKRGNYMV+VDCNGK IMGSPFPVFFSA ++ GGLLG+
Sbjct: 127 GSEQEGMVKDMGDGTYTVTYVVPKRGNYMVNVDCNGKAIMGSPFPVFFSAGTSTGGLLGL 186
Query: 684 PPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLGEVC 863
P + F N VNQTMPNMPNY+ SVSGA+ GLLGMIPG+VPGASGG ILPG+G+SLGEVC
Sbjct: 187 APAST-FPNLVNQTMPNMPNYSASVSGAFPGLLGMIPGIVPGASGGAILPGIGASLGEVC 245
Query: 864 REYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1043
REYL+GRCAK DCK NHPP N
Sbjct: 246 REYLSGRCAKTDCKLNHPPHNLLMTALAATTSMSNVSQVPMAPSAAAMAAAQAIVAAQAL 305
Query: 1044 XXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVD 1223
GSP+KAG+ D LKKTLQVSNLSPLLTVEQLKQLFS+CGTVV+
Sbjct: 306 QAHAAQVQAHAQSNKDSSGSPDKAGKADVLKKTLQVSNLSPLLTVEQLKQLFSFCGTVVE 365
Query: 1224 CSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSL 1403
C+ITDSKHFAYIEYSKPEEA+AAL LNNMDVGGRPLNVEMAKSLP KPAI+N+ + SSL
Sbjct: 366 CTITDSKHFAYIEYSKPEEASAALQLNNMDVGGRPLNVEMAKSLPQKPAIMNSSMASSSL 425
Query: 1404 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKAEGV 1583
P NRAATMK+ATELA+ARAAEIS+KLKA+GV
Sbjct: 426 PMVMQQAVAMQQMQFQQALLMQQTMTAQQAANRAATMKTATELAAARAAEISKKLKADGV 485
Query: 1584 GNEEKETEIK----NXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXX 1751
EEKET K + I Y
Sbjct: 486 DIEEKETTEKSRSPSPHFAKSKSKSKSRSRSPINYRRRRKSPSYSPPSRYPRDRRSRSPL 545
Query: 1752 XXXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKAS 1931
H+ +Y+++RR +S R R+ S++
Sbjct: 546 RSRHYSSYDNDRRSFRDIKNEGERTRRRDLDRSHDHHS-----THYEKAKHRERRRSRSV 600
Query: 1932 LASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEG--- 2102
K HR L E + HRRRSRSKS+E
Sbjct: 601 STDDKHHRRRL-----------------------SPRSLDENKTKHRRRSRSKSVEDKHH 637
Query: 2103 -----------------------TSYHRRRSRSKSVEDTSNHRRR--SRSKSIEDRVHSG 2207
S HR R RS+S+ H RR S +S++D
Sbjct: 638 PDDKTNEMRDEKTKHRDRRRRDKKSKHRDRRRSRSISPEGKHDRRHGSSPRSLDDNKLKH 697
Query: 2208 GKRDRSKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSA-LSQKKSTLSTDD 2384
+R RSKS +R H+ +D + + D+ G SA L K+
Sbjct: 698 RRRSRSKSA-----ERKHRSNDRAYKSR----DEKEKGHRRRRSRSASLEPKRRRGRRLS 748
Query: 2385 KRSSDEK 2405
RSSDEK
Sbjct: 749 PRSSDEK 755
>ref|XP_002885603.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata] gi|297331443|gb|EFH61862.1| hypothetical protein
ARALYDRAFT_898933 [Arabidopsis lyrata subsp. lyrata]
Length = 985
Score = 511 bits (1316), Expect = e-141
Identities = 354/928 (38%), Positives = 460/928 (49%), Gaps = 13/928 (1%)
Frame = +3
Query: 318 FVKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGV 497
++ KP+GPVDP+K + S+FVVVTKDSDGRK+PNGG ++V++CPGV
Sbjct: 78 YLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGRKVPNGGALIRVRVCPGV 137
Query: 498 GVGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFS-ASNAGGL 674
GVGG+DQEG+VKD GDG+Y VTYVVPKRGNYMV+++CNG IMGSPFPVFFS S++ GL
Sbjct: 138 GVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGSAIMGSPFPVFFSQGSSSTGL 197
Query: 675 LGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLG 854
+G P + ++N +NQTMPNMPNY GSVSGA+ GLLGM+PG+ G SGG ILPGVG+SLG
Sbjct: 198 MGSAPAS--YSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIASGPSGGAILPGVGASLG 255
Query: 855 EVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1034
EVCREYLNGRC + CK NHPPQN
Sbjct: 256 EVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNMSQVPMAPSAAAMAAAQAIVAA 315
Query: 1035 XXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGT 1214
GSPEK D+LKK LQVSNLSP LT EQL+QLFS+CGT
Sbjct: 316 QALQAHASQMQAQAQSNKGSLGSPEKGENGDSLKKFLQVSNLSPSLTTEQLRQLFSFCGT 375
Query: 1215 VVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQ 1394
VVDCSITDSKH AYIEYS EEATAALALNN +V GRPLNVE+AKSLP KP+ N +
Sbjct: 376 VVDCSITDSKHLAYIEYSNSEEATAALALNNTEVFGRPLNVEIAKSLPHKPSSNN---SS 432
Query: 1395 SSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKA 1574
SSLP NRAATMKSATELA+ARAAEISRKL+
Sbjct: 433 SSLPLMMQQAVAMQQMQFQQAILMQQAVATQQAANRAATMKSATELAAARAAEISRKLRP 492
Query: 1575 EGVGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
+GVGN+ KE + K+ I Y
Sbjct: 493 DGVGNDVKEADQKS-RSPSKSPGSRSKSKSPISYRRRRRSRSYSPPFRRPRSHRSRSPLR 551
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
YE RR + +S SRR SRSVSP+ RK + L
Sbjct: 552 YHRRSTYEGRRRSY---RDSRDISESRRYGRSDEHHSSSSRR--SRSVSPKKRKSGQEDL 606
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
+ R+S E R RSRS+S+E ++
Sbjct: 607 ELSRHRRDSSSRGDKKSSRAGSRSPRRRKEVKSTPRDDEENKLKRRTRSRSRSVEDSADM 666
Query: 2115 RRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQH 2294
+ SR E+ +H++RSRS+S EDR + S K K +R+ K E
Sbjct: 667 KDESRD---EELKHHKKRSRSRSREDRSKTRDASRNSDETKRKHRRRSRSKSLENDNGSD 723
Query: 2295 IGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTK--KSALDVNDTEKFDAL 2468
VD ++DG +S S+++S +D + +G S+++ ++ + K D
Sbjct: 724 ENVDVAQDGDL----NSRHSRRRSNSLDEDYDMKERRGRSRSRSLETKNRSSGKNKLDED 779
Query: 2469 QNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDK 2648
+N + S S GKR Y+K T RS+D +KS++RS R +
Sbjct: 780 RNTGSRRRRSRSKSVEGKR------SYNKET----------RSRD-KKSKRRSGRRSRSP 822
Query: 2649 VDTSKTERN-------NSDKDGAHAV-NKSLSKHGKSSSEYKRHEKVESVRREKAVLDDD 2804
K R+ + +K H ++S S K+SS KR ++ E +R V D
Sbjct: 823 SSEGKQGRDIRSSPGYSDEKKSRHKQHSRSRSTEKKNSSREKRSKRHERLRSSSPV--GD 880
Query: 2805 SREGRKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVAEDIGSGNFDLSETK 2984
R G ++ S+ H+ ++S G+K EK R + V + + +F E
Sbjct: 881 KRRGDRSLSPVSSEDHKIKKRHS----GSKS--VKEKPRSDYEKVDDGDANSDFSRPERN 934
Query: 2985 DTPKLKSHRSSSSAEDETT--NDPKYSS 3062
L S S SS + E + N P SS
Sbjct: 935 LEGLLLSLDSMSSQDVEKSKENPPSSSS 962
Score = 70.5 bits (171), Expect = 7e-09
Identities = 98/387 (25%), Positives = 158/387 (40%), Gaps = 16/387 (4%)
Frame = +3
Query: 2067 HRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKI 2246
HR RS + ++Y RR + D S RR RS ++ S +R RS S K +
Sbjct: 544 HRSRSPLRYHRRSTYEGRRRSYRDSRDISESRRYGRS---DEHHSSSSRRSRSVSPKKR- 599
Query: 2247 DQRNHQKDDETAEKQHIGVDDSR-DGGTDVLGSSALSQKKSTLST-----DDKRSSDEKG 2408
++ Q+D E + +H SR D + GS + ++K ST ++K +
Sbjct: 600 --KSGQEDLELS--RHRRDSSSRGDKKSSRAGSRSPRRRKEVKSTPRDDEENKLKRRTRS 655
Query: 2409 ESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPH 2588
S++ + + D+ D + + L++++ S + + R A S + DE
Sbjct: 656 RSRSVEDSADMKDESRDEELKHHKKRSRSRSREDRSKTRDA----------SRNSDETKR 705
Query: 2589 SRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVE 2768
+ +R +DN + VD ++ NS + + K R +E
Sbjct: 706 KHRRRSRSKSLENDNGSDENVDVAQDGDLNSRHSRRRSNSLDEDYDMKERRGRSRSRSLE 765
Query: 2769 SVRRE--KAVLDDDSREG-RKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSV 2939
+ R K LD+D G R+ SKS + S K + RS +R +S
Sbjct: 766 TKNRSSGKNKLDEDRNTGSRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSE 825
Query: 2940 AE---DIGSGNFDLSETKDTPKLKSHRSSSSAEDETTNDPKYSSRHER---SELVKDNSE 3101
+ DI S E K + K H S S E + ++ K S RHER S V D
Sbjct: 826 GKQGRDIRSSPGYSDEKKS--RHKQHSRSRSTEKKNSSREKRSKRHERLRSSSPVGDKRR 883
Query: 3102 ESRNLMAPNSSLEKIQERVS-SFSVEE 3179
R+L +S KI++R S S SV+E
Sbjct: 884 GDRSLSPVSSEDHKIKKRHSGSKSVKE 910
Score = 68.2 bits (165), Expect = 3e-08
Identities = 124/495 (25%), Positives = 193/495 (38%), Gaps = 29/495 (5%)
Frame = +3
Query: 2079 SRSKSLEGTSYHRR---RSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKID 2249
SRSKS SY RR RS S +HR RS + + G +R S +
Sbjct: 515 SRSKSKSPISYRRRRRSRSYSPPFRRPRSHRSRSPLRYHRRSTYEGRRRSYRDSRDISES 574
Query: 2250 QRNHQKDD---ETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKT 2420
+R + D+ ++ + R G + L S ++ + S DK+SS + S++
Sbjct: 575 RRYGRSDEHHSSSSRRSRSVSPKKRKSGQEDLELS--RHRRDSSSRGDKKSS--RAGSRS 630
Query: 2421 KKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSK 2600
+ +V T + D EN L KR S S+ S D + SR +
Sbjct: 631 PRRRKEVKSTPRDD--------EENKL------KRRTRS---RSRSVEDSADMKDESRDE 673
Query: 2601 DARKSEKRSDNR-RKDKVDTSKTERNNSDKDGAH---AVNKSLSKHGKSSSEY------- 2747
+ + +KRS +R R+D+ T RN+ + H + +KSL S
Sbjct: 674 ELKHHKKRSRSRSREDRSKTRDASRNSDETKRKHRRRSRSKSLENDNGSDENVDVAQDGD 733
Query: 2748 --KRHEKVESVRREKAVLDDD----SREGRKASDYSKSKSHRCSSKNSEDIGGAKDRHRS 2909
RH RR LD+D R GR S ++K +R S KN D +DR+
Sbjct: 734 LNSRHS-----RRRSNSLDEDYDMKERRGRSRSRSLETK-NRSSGKNKLD----EDRNTG 783
Query: 2910 EKRRHEITSVAEDIGSGNFDLSETKDTPKLKSHRSSSSAEDE------TTNDPKYSSRHE 3071
+RR + E S N + K +S R S S E + P YS E
Sbjct: 784 SRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSD--E 841
Query: 3072 RSELVKDNSEESRNLMAPNSSLEKIQERVSSFSVEEAFVDANDRGQYGRSRVYSDKFDMF 3251
+ K +S SR+ NSS EK +R D RG S V S+ +
Sbjct: 842 KKSRHKQHS-RSRSTEKKNSSREKRSKRHERLRSSSPVGDKR-RGDRSLSPVSSEDHKI- 898
Query: 3252 TDQDNDTDNKKFVEDELANMEKSKIYDGSAVMEGQENLSVQETSIHGMPGVGCRELNRND 3431
+ + +K E ++ E K+ DG A + S E ++ G+ + + +
Sbjct: 899 --KKRHSGSKSVKEKPRSDYE--KVDDGDA----NSDFSRPERNLEGL--LLSLDSMSSQ 948
Query: 3432 SIVRSQEAPGFSESM 3476
+ +S+E P S S+
Sbjct: 949 DVEKSKENPPSSSSV 963
>dbj|BAB03007.1| unnamed protein product [Arabidopsis thaliana]
Length = 1006
Score = 508 bits (1307), Expect = e-140
Identities = 353/964 (36%), Positives = 464/964 (48%), Gaps = 35/964 (3%)
Frame = +3
Query: 318 FVKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGV 497
++ KP+GPVDP+K + S+FVVVTKDSDGRK+PNGG ++VK+ PGV
Sbjct: 80 YLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGRKVPNGGALIRVKVSPGV 139
Query: 498 GVGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFS-ASNAGGL 674
GVGG+DQEG+VKD GDG+Y VTYVVPKRGNYMV+++CNG IMGSPFPVFFS S++ GL
Sbjct: 140 GVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGNAIMGSPFPVFFSQGSSSTGL 199
Query: 675 LGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLG 854
+G P + ++N +NQTMPNMPNY GSVSGA+ GLLGM+PG+ G SGG ILPGVG+SLG
Sbjct: 200 MGSAPAS--YSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIASGPSGGAILPGVGASLG 257
Query: 855 EVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1034
EVCREYLNGRC + CK NHPPQN
Sbjct: 258 EVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAA 317
Query: 1035 XXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGT 1214
GSPEK D LKK LQVSNLSP LT EQL+QLFS+CGT
Sbjct: 318 QALQAHASQMQAQAQSNKGSLGSPEKGENGD-LKKFLQVSNLSPSLTTEQLRQLFSFCGT 376
Query: 1215 VVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQ 1394
VVDCSITDSKH AYIEYS EEATAALALNN +V GR LNVE+AKSLP KP+ N +
Sbjct: 377 VVDCSITDSKHIAYIEYSNSEEATAALALNNTEVFGRALNVEIAKSLPHKPSSNN---SS 433
Query: 1395 SSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKA 1574
SSLP NRAATMKSATELA+ARAAEISRKL+
Sbjct: 434 SSLPLMMQQAVAMQQMQFQQAILMQQAVATQQAANRAATMKSATELAAARAAEISRKLRP 493
Query: 1575 EGVGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
+GVGN+EKE + K+ I Y
Sbjct: 494 DGVGNDEKEADQKSRSPSKSPARSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLR 553
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
YE RR + +S SRR SRSVSP+ RK +
Sbjct: 554 YQRRSTYEGRRRSY---RDSRDISESRRYGRSDEHHSSSSRR--SRSVSPKKRKSGQEDS 608
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
+ R+S E R RSRS+S+E ++
Sbjct: 609 ELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADI 668
Query: 2115 RRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQH 2294
+ +SR E+ +H++RSRS+S EDR + S K K QR+ + E H
Sbjct: 669 KDKSRD---EELKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSH 725
Query: 2295 IGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKKSALDVNDT--EKFDAL 2468
VD ++D +S S+++S +D + +G S+++ + K D
Sbjct: 726 ENVDVAQDNDL----NSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDED 781
Query: 2469 QNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDK 2648
+N + S S GKR Y+K T RS+D +KS++RS R +
Sbjct: 782 RNTGSRRRRSRSKSVEGKR------SYNKET----------RSRD-KKSKRRSGRRSRSP 824
Query: 2649 VDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVESVRREKAVLDDDSREGRKAS 2828
K R+ + S + S +KRH + S+ ++ + D S+ +
Sbjct: 825 SSEGKQGRD---------IRSSPGYSDEKKSRHKRHSRSRSIEKKNSSRDKRSKRHERLR 875
Query: 2829 DYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVAE---------DIGSGNFDLSE- 2978
S + R ++ + + + H+ +KR SV E D G N D S+
Sbjct: 876 SSSPGRDKRRGDRSLSPV--SSEDHKIKKRHSGSKSVKEKPHSDYEKVDDGDANSDSSQQ 933
Query: 2979 ---------------TKDTPKLKSHRSSSSAED--ETTNDPKYSSR-----HERSELVKD 3092
++D K K + SSS+ + + +D K+ R E +V+
Sbjct: 934 ERNLEGHLLSLDSMSSQDVEKSKENPPSSSSVERGDANDDEKFKVRFLFLGEEVCLMVQQ 993
Query: 3093 NSEE 3104
NSEE
Sbjct: 994 NSEE 997
Score = 72.0 bits (175), Expect = 2e-09
Identities = 94/392 (23%), Positives = 153/392 (39%), Gaps = 32/392 (8%)
Frame = +3
Query: 2076 RSRSKSLEGTSYHRRR---SRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKI 2246
RSRSKS SY RRR + S +HR RS + + G +R S +
Sbjct: 516 RSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYEGRRRSYRDSRDISE 575
Query: 2247 DQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDD------KRSSDEKG 2408
+R + D+ + S ++S KK +D +R S +G
Sbjct: 576 SRRYGRSDEHHSSSSR--------------RSRSVSPKKRKSGQEDSELSRLRRDSSSRG 621
Query: 2409 ESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPH 2588
E K+ ++ + ++ S + + KR S S+ S D +
Sbjct: 622 EKKSSRAG-------SRSPRRRKEVKSTPRDDEENKVKRRTRS---RSRSVEDSADIKDK 671
Query: 2589 SRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVE 2768
SR ++ + +KRS +R ++ D SKT + + D A ++ S+ ++ HE V+
Sbjct: 672 SRDEELKHHKKRSRSRSRE--DRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVD 729
Query: 2769 -----------SVRREKAVLDDDSREGRKASDYSKS--KSHRCSSKNSEDIGGAKDRHRS 2909
S RR K++ +D + R+ S+S +R S KN D +DR+
Sbjct: 730 VAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLD----EDRNTG 785
Query: 2910 EKRRHEITSVAEDIGSGNFDLSETKDTPKLKSHRSSSSAEDE------TTNDPKYS---- 3059
+RR + E S N + K +S R S S E + P YS
Sbjct: 786 SRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKK 845
Query: 3060 SRHERSELVKDNSEESRNLMAPNSSLEKIQER 3155
SRH+R SR++ NSS +K +R
Sbjct: 846 SRHKR-------HSRSRSIEKKNSSRDKRSKR 870
>ref|NP_189032.2| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
gi|334185580|ref|NP_001189958.1| RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
gi|332643307|gb|AEE76828.1| RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
gi|332643309|gb|AEE76830.1| RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
Length = 987
Score = 507 bits (1305), Expect = e-140
Identities = 352/954 (36%), Positives = 460/954 (48%), Gaps = 20/954 (2%)
Frame = +3
Query: 318 FVKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGV 497
++ KP+GPVDP+K + S+FVVVTKDSDGRK+PNGG ++VK+ PGV
Sbjct: 80 YLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGRKVPNGGALIRVKVSPGV 139
Query: 498 GVGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFS-ASNAGGL 674
GVGG+DQEG+VKD GDG+Y VTYVVPKRGNYMV+++CNG IMGSPFPVFFS S++ GL
Sbjct: 140 GVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGNAIMGSPFPVFFSQGSSSTGL 199
Query: 675 LGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLG 854
+G P + ++N +NQTMPNMPNY GSVSGA+ GLLGM+PG+ G SGG ILPGVG+SLG
Sbjct: 200 MGSAPAS--YSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIASGPSGGAILPGVGASLG 257
Query: 855 EVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1034
EVCREYLNGRC + CK NHPPQN
Sbjct: 258 EVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAA 317
Query: 1035 XXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGT 1214
GSPEK D LKK LQVSNLSP LT EQL+QLFS+CGT
Sbjct: 318 QALQAHASQMQAQAQSNKGSLGSPEKGENGD-LKKFLQVSNLSPSLTTEQLRQLFSFCGT 376
Query: 1215 VVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQ 1394
VVDCSITDSKH AYIEYS EEATAALALNN +V GR LNVE+AKSLP KP+ N +
Sbjct: 377 VVDCSITDSKHIAYIEYSNSEEATAALALNNTEVFGRALNVEIAKSLPHKPSSNN---SS 433
Query: 1395 SSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKA 1574
SSLP NRAATMKSATELA+ARAAEISRKL+
Sbjct: 434 SSLPLMMQQAVAMQQMQFQQAILMQQAVATQQAANRAATMKSATELAAARAAEISRKLRP 493
Query: 1575 EGVGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
+GVGN+EKE + K+ I Y
Sbjct: 494 DGVGNDEKEADQKSRSPSKSPARSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLR 553
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
YE RR + +S SRR SRSVSP+ RK +
Sbjct: 554 YQRRSTYEGRRRSY---RDSRDISESRRYGRSDEHHSSSSRR--SRSVSPKKRKSGQEDS 608
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
+ R+S E R RSRS+S+E ++
Sbjct: 609 ELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADI 668
Query: 2115 RRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQH 2294
+ +SR E+ +H++RSRS+S EDR + S K K QR+ + E H
Sbjct: 669 KDKSRD---EELKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSH 725
Query: 2295 IGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKKSALDVNDT--EKFDAL 2468
VD ++D +S S+++S +D + +G S+++ + K D
Sbjct: 726 ENVDVAQDNDL----NSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDED 781
Query: 2469 QNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDK 2648
+N + S S GKR Y+K T RS+D +KS++RS R +
Sbjct: 782 RNTGSRRRRSRSKSVEGKR------SYNKET----------RSRD-KKSKRRSGRRSRSP 824
Query: 2649 VDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVESVRREKAVLDDDSREGRKAS 2828
K R+ + S + S +KRH + S+ ++ + D S+ +
Sbjct: 825 SSEGKQGRD---------IRSSPGYSDEKKSRHKRHSRSRSIEKKNSSRDKRSKRHERLR 875
Query: 2829 DYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVAE---------DIGSGNFDLSET 2981
S + R ++ + + + H+ +KR SV E D G N D S+
Sbjct: 876 SSSPGRDKRRGDRSLSPV--SSEDHKIKKRHSGSKSVKEKPHSDYEKVDDGDANSDSSQQ 933
Query: 2982 KDTPKLKSH------RSSSSAEDETTNDPKYSS--RHERSELVKDNSEESRNLM 3119
+ L+ H SS E N P SS R + ++ K EE R ++
Sbjct: 934 E--RNLEGHLLSLDSMSSQDVEKSKENPPSSSSVERGDANDDEKFKIEEKRIIL 985
Score = 72.0 bits (175), Expect = 2e-09
Identities = 94/392 (23%), Positives = 153/392 (39%), Gaps = 32/392 (8%)
Frame = +3
Query: 2076 RSRSKSLEGTSYHRRR---SRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKI 2246
RSRSKS SY RRR + S +HR RS + + G +R S +
Sbjct: 516 RSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYEGRRRSYRDSRDISE 575
Query: 2247 DQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDD------KRSSDEKG 2408
+R + D+ + S ++S KK +D +R S +G
Sbjct: 576 SRRYGRSDEHHSSSSR--------------RSRSVSPKKRKSGQEDSELSRLRRDSSSRG 621
Query: 2409 ESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPH 2588
E K+ ++ + ++ S + + KR S S+ S D +
Sbjct: 622 EKKSSRAG-------SRSPRRRKEVKSTPRDDEENKVKRRTRS---RSRSVEDSADIKDK 671
Query: 2589 SRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVE 2768
SR ++ + +KRS +R ++ D SKT + + D A ++ S+ ++ HE V+
Sbjct: 672 SRDEELKHHKKRSRSRSRE--DRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVD 729
Query: 2769 -----------SVRREKAVLDDDSREGRKASDYSKS--KSHRCSSKNSEDIGGAKDRHRS 2909
S RR K++ +D + R+ S+S +R S KN D +DR+
Sbjct: 730 VAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLD----EDRNTG 785
Query: 2910 EKRRHEITSVAEDIGSGNFDLSETKDTPKLKSHRSSSSAEDE------TTNDPKYS---- 3059
+RR + E S N + K +S R S S E + P YS
Sbjct: 786 SRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKK 845
Query: 3060 SRHERSELVKDNSEESRNLMAPNSSLEKIQER 3155
SRH+R SR++ NSS +K +R
Sbjct: 846 SRHKR-------HSRSRSIEKKNSSRDKRSKR 870
Score = 63.5 bits (153), Expect = 8e-07
Identities = 82/349 (23%), Positives = 138/349 (39%), Gaps = 3/349 (0%)
Frame = +3
Query: 2052 EGTSYHRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKS 2231
E HR+RSRS+SLE + D ++ + RSKS+++ +R RS+S
Sbjct: 704 EAKQKHRQRSRSRSLENDNGSHENVDVAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRS 763
Query: 2232 EKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGE 2411
L+ R+ +K+ +D+ R+ G + ++ + S + KRS +++
Sbjct: 764 RSLETKNRSSRKNK---------LDEDRNTG-------SRRRRSRSKSVEGKRSYNKETR 807
Query: 2412 SKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHS 2591
S+ KKS + + S + S+ G+ + +SP + + S + HS
Sbjct: 808 SRDKKSK------------RRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKSR---HKRHS 852
Query: 2592 RSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEY---KRHEK 2762
RS+ K D R K + ER S G S SS ++ KRH
Sbjct: 853 RSRSIEKKNSSRDKRSK------RHERLRSSSPGRDKRRGDRSLSPVSSEDHKIKKRHSG 906
Query: 2763 VESVRREKAVLDDDSREGRKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVA 2942
+SV+ + SDY K D G A ++R E ++
Sbjct: 907 SKSVKE------------KPHSDYEK-----------VDDGDANSDSSQQERNLEGHLLS 943
Query: 2943 EDIGSGNFDLSETKDTPKLKSHRSSSSAEDETTNDPKYSSRHERSELVK 3089
D S D+ ++K+ P SSSS E ND + E+ ++K
Sbjct: 944 LDSMSSQ-DVEKSKENPP-----SSSSVERGDANDDEKFKIEEKRIILK 986
>ref|NP_001030753.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana]
gi|332643308|gb|AEE76829.1| RNA recognition motif
(RRM)-containing protein [Arabidopsis thaliana]
Length = 934
Score = 501 bits (1290), Expect = e-138
Identities = 333/879 (37%), Positives = 433/879 (49%), Gaps = 3/879 (0%)
Frame = +3
Query: 318 FVKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGV 497
++ KP+GPVDP+K + S+FVVVTKDSDGRK+PNGG ++VK+ PGV
Sbjct: 80 YLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGRKVPNGGALIRVKVSPGV 139
Query: 498 GVGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFS-ASNAGGL 674
GVGG+DQEG+VKD GDG+Y VTYVVPKRGNYMV+++CNG IMGSPFPVFFS S++ GL
Sbjct: 140 GVGGTDQEGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGNAIMGSPFPVFFSQGSSSTGL 199
Query: 675 LGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLG 854
+G P + ++N +NQTMPNMPNY GSVSGA+ GLLGM+PG+ G SGG ILPGVG+SLG
Sbjct: 200 MGSAPAS--YSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGIASGPSGGAILPGVGASLG 257
Query: 855 EVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1034
EVCREYLNGRC + CK NHPPQN
Sbjct: 258 EVCREYLNGRCVNSMCKLNHPPQNLLMTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAA 317
Query: 1035 XXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGT 1214
GSPEK D LKK LQVSNLSP LT EQL+QLFS+CGT
Sbjct: 318 QALQAHASQMQAQAQSNKGSLGSPEKGENGD-LKKFLQVSNLSPSLTTEQLRQLFSFCGT 376
Query: 1215 VVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQ 1394
VVDCSITDSKH AYIEYS EEATAALALNN +V GR LNVE+AKSLP KP+ N +
Sbjct: 377 VVDCSITDSKHIAYIEYSNSEEATAALALNNTEVFGRALNVEIAKSLPHKPSSNN---SS 433
Query: 1395 SSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKA 1574
SSLP NRAATMKSATELA+ARAAEISRKL+
Sbjct: 434 SSLPLMMQQAVAMQQMQFQQAILMQQAVATQQAANRAATMKSATELAAARAAEISRKLRP 493
Query: 1575 EGVGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
+GVGN+EKE + K+ I Y
Sbjct: 494 DGVGNDEKEADQKSRSPSKSPARSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLR 553
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
YE RR + +S SRR SRSVSP+ RK +
Sbjct: 554 YQRRSTYEGRRRSY---RDSRDISESRRYGRSDEHHSSSSRR--SRSVSPKKRKSGQEDS 608
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
+ R+S E R RSRS+S+E ++
Sbjct: 609 ELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADI 668
Query: 2115 RRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQH 2294
+ +SR E+ +H++RSRS+S EDR + S K K QR+ + E H
Sbjct: 669 KDKSRD---EELKHHKKRSRSRSREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSH 725
Query: 2295 IGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKKSALDVNDT--EKFDAL 2468
VD ++D +S S+++S +D + +G S+++ + K D
Sbjct: 726 ENVDVAQDNDL----NSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLDED 781
Query: 2469 QNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDK 2648
+N + S S GKR Y+K T RS+D +KS++RS R +
Sbjct: 782 RNTGSRRRRSRSKSVEGKR------SYNKET----------RSRD-KKSKRRSGRRSRSP 824
Query: 2649 VDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVESVRREKAVLDDDSREGRKAS 2828
K R+ + S + S +KRH + S+ ++ + D S+ +
Sbjct: 825 SSEGKQGRD---------IRSSPGYSDEKKSRHKRHSRSRSIEKKNSSRDKRSKRHERLR 875
Query: 2829 DYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITSVAE 2945
S + R ++ + + + H+ +KR SV E
Sbjct: 876 SSSPGRDKRRGDRSLSPV--SSEDHKIKKRHSGSKSVKE 912
Score = 72.8 bits (177), Expect = 1e-09
Identities = 100/395 (25%), Positives = 162/395 (41%), Gaps = 24/395 (6%)
Frame = +3
Query: 2067 HRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKI 2246
HR RS + ++Y RR + D S RR RS D HS R RS+S +
Sbjct: 546 HRSRSPLRYQRRSTYEGRRRSYRDSRDISESRRYGRS----DEHHSSSSR-RSRS----V 596
Query: 2247 DQRNHQKDDETAEKQHIGVDDSRDGG--TDVLGSSALSQKKSTLST-----DDKRSSDEK 2405
+ + E +E + D S G + GS + ++K ST ++K +
Sbjct: 597 SPKKRKSGQEDSELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTR 656
Query: 2406 GESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQP 2585
S++ + + D+ D + + L++++ S + + R TS + DE
Sbjct: 657 SRSRSVEDSADIKDKSRDEELKHHKKRSRSRSREDRSKTR----------DTSRNSDEAK 706
Query: 2586 HSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLS---------KHGKSS 2738
+ +R +DN + VD ++ ++D + H+ +S S + G+S
Sbjct: 707 QKHRQRSRSRSLENDNGSHENVDVAQ----DNDLNSRHSKRRSKSLDEDYDMKERRGRSR 762
Query: 2739 SEYKRHEKVESVRREKAVLDDDSREG-RKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEK 2915
S K S R+ K LD+D G R+ SKS + S K + RS +
Sbjct: 763 SR-SLETKNRSSRKNK--LDEDRNTGSRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGR 819
Query: 2916 RRHEITSVAE---DIGSGNFDLSETKDTPKLKSHRSSSSAEDETTNDPKYSSRHER---S 3077
R +S + DI S E K + K H S S E + ++ K S RHER S
Sbjct: 820 RSRSPSSEGKQGRDIRSSPGYSDEKKS--RHKRHSRSRSIEKKNSSRDKRSKRHERLRSS 877
Query: 3078 ELVKDNSEESRNLMAPNSSLEKIQERVS-SFSVEE 3179
+D R+L +S KI++R S S SV+E
Sbjct: 878 SPGRDKRRGDRSLSPVSSEDHKIKKRHSGSKSVKE 912
Score = 72.0 bits (175), Expect = 2e-09
Identities = 94/392 (23%), Positives = 153/392 (39%), Gaps = 32/392 (8%)
Frame = +3
Query: 2076 RSRSKSLEGTSYHRRR---SRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKI 2246
RSRSKS SY RRR + S +HR RS + + G +R S +
Sbjct: 516 RSRSKSKSPISYRRRRRSPTYSPPFRRPRSHRSRSPLRYQRRSTYEGRRRSYRDSRDISE 575
Query: 2247 DQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDD------KRSSDEKG 2408
+R + D+ + S ++S KK +D +R S +G
Sbjct: 576 SRRYGRSDEHHSSSSR--------------RSRSVSPKKRKSGQEDSELSRLRRDSSSRG 621
Query: 2409 ESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPH 2588
E K+ ++ + ++ S + + KR S S+ S D +
Sbjct: 622 EKKSSRAG-------SRSPRRRKEVKSTPRDDEENKVKRRTRSR---SRSVEDSADIKDK 671
Query: 2589 SRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRHEKVE 2768
SR ++ + +KRS +R ++ D SKT + + D A ++ S+ ++ HE V+
Sbjct: 672 SRDEELKHHKKRSRSRSRE--DRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVD 729
Query: 2769 -----------SVRREKAVLDDDSREGRKASDYSKS--KSHRCSSKNSEDIGGAKDRHRS 2909
S RR K++ +D + R+ S+S +R S KN D +DR+
Sbjct: 730 VAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLETKNRSSRKNKLD----EDRNTG 785
Query: 2910 EKRRHEITSVAEDIGSGNFDLSETKDTPKLKSHRSSSSAEDE------TTNDPKYS---- 3059
+RR + E S N + K +S R S S E + P YS
Sbjct: 786 SRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKK 845
Query: 3060 SRHERSELVKDNSEESRNLMAPNSSLEKIQER 3155
SRH+R SR++ NSS +K +R
Sbjct: 846 SRHKR-------HSRSRSIEKKNSSRDKRSKR 870
>ref|XP_006296861.1| hypothetical protein CARUB_v10012848mg [Capsella rubella]
gi|482565570|gb|EOA29759.1| hypothetical protein
CARUB_v10012848mg [Capsella rubella]
Length = 1140
Score = 493 bits (1269), Expect = e-136
Identities = 364/1041 (34%), Positives = 487/1041 (46%), Gaps = 35/1041 (3%)
Frame = +3
Query: 318 FVKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGV 497
++ KP+GPVDP+K + S+FVVVTKDSDGRK+P+GG ++VK+ PGV
Sbjct: 77 YLSRKPIGPVDPSKSTASGAGIGGGTACVPSTFVVVTKDSDGRKVPSGGALIRVKVFPGV 136
Query: 498 GVGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFS-ASNAGGL 674
GVGG+DQ+G+VKD GDG+Y VTYVVPKRGNYMV+++CNG IMGSPFPVFFS S++ GL
Sbjct: 137 GVGGTDQQGVVKDVGDGSYAVTYVVPKRGNYMVNIECNGSAIMGSPFPVFFSQGSSSTGL 196
Query: 675 LGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSLG 854
+G P + ++N +NQTMPNMPNY GSVSGA+ GLLGM+PG+ G SGG ILPGVG+SLG
Sbjct: 197 MGSAPAS--YSNLINQTMPNMPNYTGSVSGAFPGLLGMVPGISSGPSGGAILPGVGASLG 254
Query: 855 EVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1034
EVCREYLNGRC CK NHPPQN
Sbjct: 255 EVCREYLNGRCVNTMCKLNHPPQNLLMTAIAATTSMGNLSQVPMAPSAAAMAAAQAIVAA 314
Query: 1035 XXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCGT 1214
GSPEK + D+LKK LQVSNLSP LT EQL+QLFS+CGT
Sbjct: 315 QALQAHASQMQAHAQSNKGSLGSPEKGEKGDSLKKFLQVSNLSPSLTTEQLRQLFSFCGT 374
Query: 1215 VVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVNQ 1394
VVDCSITDSK AYIEYS EEATAALALNN +V GRPLNVE+AKSLP KP ++ +
Sbjct: 375 VVDCSITDSKQLAYIEYSNSEEATAALALNNTEVFGRPLNVEIAKSLPQKP---SSNSSS 431
Query: 1395 SSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLKA 1574
SSLP NRAATMKSATELA+ARAAEISRKL+
Sbjct: 432 SSLPMMMQQAVAMQQMQFQQAILMQQAVATQQAANRAATMKSATELAAARAAEISRKLRP 491
Query: 1575 EGVGNEEKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXX 1754
+GVGN+EKE + K+ I Y
Sbjct: 492 DGVGNDEKEADQKSRSPSNSPARSRSKSKSPISYRRRRRSPSYSPPFRRPRSQRSRSPLR 551
Query: 1755 XXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASL 1934
YE RR + +S RR SRSVSP+ RK K
Sbjct: 552 YHRRSTYEGRRRSY---RDSRDISESRRYGRSDEHHSSSLRR--SRSVSPKKRKSGKEDS 606
Query: 1935 ASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYHRRRSRSKSLEGTSYH 2114
+ R+S E R RSRS+S+E ++
Sbjct: 607 ELSRHRRDSSSRGDKKSSRAGSRSPRRYKEVKSTPRDGEENKIKRRSRSRSRSVEDSADM 666
Query: 2115 RRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKLKIDQRNHQKDDETAEKQH 2294
+ +R E+ + ++RSRS+S E R + S K K R K E H
Sbjct: 667 KDEARD---EELKHQKKRSRSRSREGRSKTKDTSRNSDETKRKHRGRTRSKSLENDNGSH 723
Query: 2295 IGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKGESKTKKSALDVND----TEKFD 2462
VD ++D +S S+++S +D + +G S+++ +L+ + +K D
Sbjct: 724 ENVDVAQDDNL----NSRHSRRRSKSLDEDYDMKERRGRSRSR--SLETKNRSFGKDKLD 777
Query: 2463 ALQNNQIHSENNLSDSSVGKRLAASPVFYSKGTSTSLDEQPHSRSKDARKSEKRSDNRRK 2642
+N + S S GKR Y+K T S D++ RS +S + +
Sbjct: 778 EDRNTGSRRRRSRSKSVEGKR------SYNKET-RSRDKKSKHRSGRRSRSPSSEGKQGR 830
Query: 2643 DKVDTSKTERNNSDKDGAHAVNKSLSKHGKS-SSEYKRHEKVES------VRREKAVLDD 2801
D + + H+ ++S+ K S KRHE++ S RRE L
Sbjct: 831 DIRSSPGYSDERKSRHKRHSRSRSIEKKNSSRGKRSKRHERLRSSSPRGDKRREDRSLSP 890
Query: 2802 DSREGRK------ASDYSKSKSHRCSSKNSEDIGGA-KDRHRSEKRRHEITSVAEDIGSG 2960
S E K S K K H S D G A D E+ I S + + S
Sbjct: 891 VSSEDHKIKKRHSGSKSVKEKPH--SDYEKVDDGDANSDSSPLERNIEGILSPLDSMSSQ 948
Query: 2961 NFDLSETKDTPKLKSHRSSSSAEDETTNDPKYSSRHERSELVKDNSEESRNLMAPNSSLE 3140
D+ ++K+ P + S + A D+ + S+ S + R P ++
Sbjct: 949 --DVEKSKENPPVSSSVETWDANDDEKIKVRCCSKPVNSIPMNPPRRVPRTNSTPQLNVS 1006
Query: 3141 KIQERVSSF--------------SVEEAFVDANDRGQYGR-SRVYSDKFDMFTDQDNDTD 3275
++ R ++ + + DAN +Y R Y+ K +ND
Sbjct: 1007 NLESRGRTYVFGVPKRCWCGEDIVAKNSHSDANPCRRYVRCGYAYAKKL------ENDNH 1060
Query: 3276 NKKFVEDELAN-MEKSKIYDG 3335
K+V++ L + +EK K + G
Sbjct: 1061 VFKWVDEALLDEVEKMKQHIG 1081
>ref|XP_006421067.1| hypothetical protein CICLE_v10004448mg [Citrus clementina]
gi|557522940|gb|ESR34307.1| hypothetical protein
CICLE_v10004448mg [Citrus clementina]
Length = 709
Score = 482 bits (1240), Expect = e-133
Identities = 258/435 (59%), Positives = 295/435 (67%), Gaps = 3/435 (0%)
Frame = +3
Query: 321 VKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVG 500
+ NKP+GPVDP+K + S+F+VVTKDSDGRK+P+GG +KVK+ PGVG
Sbjct: 68 LSNKPIGPVDPSKSTAAGAGIAGGNAGAASTFMVVTKDSDGRKVPHGGAEIKVKVAPGVG 127
Query: 501 VGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA---SNAGG 671
VGGS+QEG+VKD DGTY VTYVVPKRGNYM+ ++CNGKPIMGSPFPVFFSA S GG
Sbjct: 128 VGGSEQEGIVKDMNDGTYTVTYVVPKRGNYMLSIECNGKPIMGSPFPVFFSAGSNSTGGG 187
Query: 672 LLGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSL 851
LLGM P N VNQTMPNMPNY+ SVSGA+ GLLGMIPGVV GASGG ILPG+G+SL
Sbjct: 188 LLGMAP------NLVNQTMPNMPNYSASVSGAFPGLLGMIPGVVSGASGGAILPGMGASL 241
Query: 852 GEVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1031
GEVCREYLNGRCAK DCK NH P +
Sbjct: 242 GEVCREYLNGRCAKTDCKLNH-PPHNLLMTALAATTTMGTLSQVPMAPSAAAMAAAQAIV 300
Query: 1032 XXXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCG 1211
GSP+KAG+ DALKKTLQVSNLSPLLTVEQLKQLFS+CG
Sbjct: 301 AAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNLSPLLTVEQLKQLFSFCG 360
Query: 1212 TVVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVN 1391
TVV+C+ITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKS P KP+ LN+ +
Sbjct: 361 TVVECTITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLA 420
Query: 1392 QSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLK 1571
SSLP NRAA+MKSATELA+ARAAEIS+KLK
Sbjct: 421 GSSLPMMMQQAVAMQQMQFQQALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLK 480
Query: 1572 AEGVGNEEKETEIKN 1616
A+G+ +E+KET+ K+
Sbjct: 481 ADGLVDEDKETKQKS 495
>ref|XP_006492975.1| PREDICTED: uncharacterized protein LOC102615780 isoform X1 [Citrus
sinensis]
Length = 950
Score = 481 bits (1237), Expect = e-132
Identities = 257/435 (59%), Positives = 295/435 (67%), Gaps = 3/435 (0%)
Frame = +3
Query: 321 VKNKPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVG 500
+ NKP+GPVDP+K + S+F+VVTKDSDGRK+P+GG +KVK+ PGVG
Sbjct: 68 LSNKPIGPVDPSKSTAAGAGIAGGNAGAASTFMVVTKDSDGRKVPHGGAEIKVKVAPGVG 127
Query: 501 VGGSDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA---SNAGG 671
VGGS+QEG+VKD DGTY VTYVVPKRGNYM+ ++CNGKPIMGSPFPVFFSA S GG
Sbjct: 128 VGGSEQEGIVKDMNDGTYTVTYVVPKRGNYMLSIECNGKPIMGSPFPVFFSAGSNSTGGG 187
Query: 672 LLGMPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSL 851
LLGM P N VNQTMPNMPNY+ SVSGA+ GLLGMIPGVV GASGG ILPG+G+SL
Sbjct: 188 LLGMAP------NLVNQTMPNMPNYSASVSGAFPGLLGMIPGVVSGASGGAILPGMGASL 241
Query: 852 GEVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1031
GEVCREYLNGRCAK DCK NH P +
Sbjct: 242 GEVCREYLNGRCAKTDCKLNH-PPHNLLMTALAATTTMGTLSQVPMAPSAAAMAAAQAIV 300
Query: 1032 XXXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCG 1211
GSP+KAG+ DALKKTLQVSNLSPLLTVEQL+QLFS+CG
Sbjct: 301 AAQALQAHAAQVQAQQSAKDLSGSPDKAGKADALKKTLQVSNLSPLLTVEQLRQLFSFCG 360
Query: 1212 TVVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVN 1391
TVV+C+ITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKS P KP+ LN+ +
Sbjct: 361 TVVECTITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSFPQKPSHLNSSLA 420
Query: 1392 QSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLK 1571
SSLP NRAA+MKSATELA+ARAAEIS+KLK
Sbjct: 421 GSSLPMMMQQAVAMQQMQFQQALLMQQTLTAQQAANRAASMKSATELAAARAAEISKKLK 480
Query: 1572 AEGVGNEEKETEIKN 1616
A+G+ +E+KET+ K+
Sbjct: 481 ADGLVDEDKETKQKS 495
Score = 67.4 bits (163), Expect = 6e-08
Identities = 113/479 (23%), Positives = 190/479 (39%), Gaps = 16/479 (3%)
Frame = +3
Query: 2061 SYHRRRSRSKSLEGTSY---HRRRSRSKSVEDTSNH-RRRSRSKSIEDRVHSGGKRDRSK 2228
S R RSRSKS Y +R RSRSKS S H RRRSRS S R H G R RS
Sbjct: 499 STSRARSRSKSRSPVHYQRTYRARSRSKSRSPVSFHRRRRSRSFSPPYR-HRRGHRSRS- 556
Query: 2229 SEKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDEKG 2408
+ R++ K D + + D+RDG S +S RS +
Sbjct: 557 ----PLRSRHYSKYD----NERLSTRDTRDGADRSRRESDISHHSPVPRRRKSRSVSPRS 608
Query: 2409 ESKTKKSALDVNDTEKFDALQNNQIHSEN---NLSDSSVGKRLAASPVFYSKGTSTSLDE 2579
+ + ++ A ++++ HS++ + + + A P + + S S++
Sbjct: 609 RKSYRSDSGSPKHRQESSARKSSRAHSKSPKRHRGSRNSPRNDDAKPKYRHRSRSKSMER 668
Query: 2580 QPHSRSKD-ARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYKRH 2756
H KD AR + + R++ + + + E + + A V+++ SK S
Sbjct: 669 --HDEEKDEARDGKSQHRERKRSRSLSREDEHHGRGRSPAGNVDENKSKLRGRSRSVSAL 726
Query: 2757 EKVESVRREKAVLDDDSREGRKASDYSKSKSHRCSSKNSEDIGGAKDRHRSEKRRHEITS 2936
+K +S + + DDSR+ R + + + R S + GG++D+ R S
Sbjct: 727 DKYKS-----SEIADDSRDDRLRNRHKRRS--RSKSVEGKMGGGSRDKKPKHHDRRRSRS 779
Query: 2937 VAED----IGSGN---FDLSETKDTPKLKSHRSSSSAEDETTNDPKYSSRHERSELVKDN 3095
++ D GS + D S TK + +S R +S L N
Sbjct: 780 ISADGKHHRGSRSPRGLDESRTKLGRRSRSKSIERKLYRNRGRSRSADGRRRKSMLSPAN 839
Query: 3096 SEESRNLMAPNSSLEKIQERVSSFSVEEAFVDANDRGQYGRSRVYSDKFDMFTDQDN-DT 3272
+ S + +S +S S + A ++ + Y +S + +D + N
Sbjct: 840 LDRSESNRRRHS---------ASQSKDHANSESAETRDY-KSMHHPHNWDKTEGELNASL 889
Query: 3273 DNKKFVEDELANMEKSKIYDGSAVMEGQENLSVQETSIHGMPGVGCRELNRNDSIVRSQ 3449
+ +ED+ K K YD + + EN+S E HG+ LN +D + SQ
Sbjct: 890 KDPTVMEDDGFLSSKQKNYD---LKKSMENVSAHEN--HGIKSTDPLMLNSDDVNLVSQ 943
Score = 67.0 bits (162), Expect = 7e-08
Identities = 78/340 (22%), Positives = 131/340 (38%), Gaps = 10/340 (2%)
Frame = +3
Query: 1860 YSLVSRRNGSRSVSPRTRKPSKASLASPKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXX 2039
+S V RR SRSVSPR+RK ++ SPK +ES
Sbjct: 592 HSPVPRRRKSRSVSPRSRKSYRSDSGSPKHRQES----SARKSSRAHSKSPKRHRGSRNS 647
Query: 2040 XXXXEGTSYHRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRD 2219
+ +R RSRSKS+E + + ++ + R+RSRS S ED H G+
Sbjct: 648 PRNDDAKPKYRHRSRSKSME--RHDEEKDEARDGKSQHRERKRSRSLSREDEHHGRGRSP 705
Query: 2220 RSKSEKLKIDQRNHQKDDETAEKQHIG--VDDSRDGGTDVLGS--SALSQKKSTLSTDDK 2387
++ K R + +K DDSRD D L + S+ KS
Sbjct: 706 AGNVDENKSKLRGRSRSVSALDKYKSSEIADDSRD---DRLRNRHKRRSRSKSVEGKMGG 762
Query: 2388 RSSDEKGESKTKKSALDVNDTEKFDALQNNQIHSENNLSDS--SVGKRLAASPV----FY 2549
S D+K + ++ + ++ D + S L +S +G+R + + +
Sbjct: 763 GSRDKKPKHHDRRRSRSIS----ADGKHHRGSRSPRGLDESRTKLGRRSRSKSIERKLYR 818
Query: 2550 SKGTSTSLDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHG 2729
++G S S D + ++ NRR+ SK N+ + S H
Sbjct: 819 NRGRSRSADGRRRKSMLSPANLDRSESNRRRHSASQSKDHANSESAE----TRDYKSMHH 874
Query: 2730 KSSSEYKRHEKVESVRREKAVLDDDSREGRKASDYSKSKS 2849
+ + K ++ + ++ V++DD K +Y KS
Sbjct: 875 PHNWD-KTEGELNASLKDPTVMEDDGFLSSKQKNYDLKKS 913
>ref|XP_006848480.1| hypothetical protein AMTR_s00013p00253930 [Amborella trichopoda]
gi|548851786|gb|ERN10061.1| hypothetical protein
AMTR_s00013p00253930 [Amborella trichopoda]
Length = 650
Score = 474 bits (1219), Expect = e-130
Identities = 271/561 (48%), Positives = 318/561 (56%), Gaps = 18/561 (3%)
Frame = +3
Query: 330 KPLGPVDPAKCSXXXXXXXXXXXXXXSSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVGG 509
KP+GP+DP+KCS SFVVVTKDSDG++I GG LKV+I PGVGVGG
Sbjct: 66 KPIGPLDPSKCSAAGAGISGGAACAPISFVVVTKDSDGQRINKGGAKLKVRISPGVGVGG 125
Query: 510 SDQEGMVKDQGDGTYVVTYVVPKRGNYMVHVDCNGKPIMGSPFPVFFSA---SNAGGLLG 680
S+QEGMVKDQGDGTY VTY V KRGNYMVHV+C KPIMGSPFPVFFSA S A GL G
Sbjct: 126 SEQEGMVKDQGDGTYTVTYAVSKRGNYMVHVECEEKPIMGSPFPVFFSAGTLSTAPGLFG 185
Query: 681 ---MPPTTVPFANHVNQTMPNMPNYAGSVSGAYSGLLGMIPGVVPGASGGVILPGVGSSL 851
PT+ + N VNQTMPNMPNY+G+VSGA+ GLLGM+PG++ GASGGV+LPG+G+SL
Sbjct: 186 PAPSVPTSSNYPNLVNQTMPNMPNYSGAVSGAFPGLLGMMPGIISGASGGVVLPGIGASL 245
Query: 852 GEVCREYLNGRCAKNDCKFNHPPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1031
GEVCR+YLN RC N CKF+HPP N
Sbjct: 246 GEVCRDYLNSRCPNNPCKFSHPPHNLLMAALAASTTMGTLSQMPMAPSAAAMAAAQAIVA 305
Query: 1032 XXXXXXXXXXXXXXXXXXXXXXGSPEKAGRVDALKKTLQVSNLSPLLTVEQLKQLFSYCG 1211
GSP+ + DAL++TLQVSNLSPLLTVEQLKQLFSYCG
Sbjct: 306 AQALQAHAAQVQAQAKARGDSPGSPDNEKKADALRRTLQVSNLSPLLTVEQLKQLFSYCG 365
Query: 1212 TVVDCSITDSKHFAYIEYSKPEEATAALALNNMDVGGRPLNVEMAKSLPPKPAILNTPVN 1391
TVVDCSITDSKHFAYIEYSKPEEA AALALNNMDVGGRPLNVEMAKSLP K + + +
Sbjct: 366 TVVDCSITDSKHFAYIEYSKPEEAKAALALNNMDVGGRPLNVEMAKSLPQKATLATSSSH 425
Query: 1392 QSSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAATMKSATELASARAAEISRKLK 1571
QSSLP +RAA+MKSATE+ASARAAEIS+ LK
Sbjct: 426 QSSLPLVMQQAVAMQQMQFQQALIMQQTLASQQAASRAASMKSATEMASARAAEISKMLK 485
Query: 1572 AEGVGNEEKETEIKNXXXXXXXXXXXXXXXXXI--KYXXXXXXXXXXXXXXXXXXXXXXX 1745
+G GNEEK+++ K+ I ++
Sbjct: 486 PDGNGNEEKDSDKKSRSPPASRLRSKSRSKSPIRVRHGRHSHSRSPPPVRHNRDRRSRSP 545
Query: 1746 XXXXXHHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYS----------LVSRRNGSRS 1895
HH ++ SERR+ S SRR+ SRS
Sbjct: 546 VRSRHHHSDHISERRHRESINTYRRSERRERDRSRERGRSHERERPRDNYSSSRRHRSRS 605
Query: 1896 VSPRTRKPSKASLASPKRHRE 1958
+P+TR+ S+ SP HRE
Sbjct: 606 ATPKTRRSSRVDSVSPLHHRE 626
>ref|XP_007034247.1| RNA recognition motif-containing protein isoform 8 [Theobroma cacao]
gi|508713276|gb|EOY05173.1| RNA recognition
motif-containing protein isoform 8 [Theobroma cacao]
Length = 864
Score = 462 bits (1189), Expect = e-127
Identities = 328/892 (36%), Positives = 417/892 (46%), Gaps = 68/892 (7%)
Frame = +3
Query: 408 SSFVVVTKDSDGRKIPNGGVSLKVKICPGVGVGGSDQEGMVKDQGDGTYVVTYVVPKRGN 587
S+F+VVTKD+DGRK+ +GG +KVK+ PGVGVGGS+QEG+VKD GDGTY VTYVVPKRGN
Sbjct: 16 STFMVVTKDADGRKVQSGGAQIKVKVSPGVGVGGSEQEGIVKDMGDGTYTVTYVVPKRGN 75
Query: 588 YMVHVDCNGKPIMGSPFPVFFSA-SNAGGLLGMPPTTVPFANHVNQTMPNMPNYAGSVSG 764
YMV+++CNGKPIMGSPFPVFFSA ++ GGLLG+ P + + N VNQTMPNMPNY
Sbjct: 76 YMVNIECNGKPIMGSPFPVFFSAGTSTGGLLGVAPAST-YPNLVNQTMPNMPNY------ 128
Query: 765 AYSGLLGMIPGVVPGASGGVILPGVGSSLGEVCREYLNGRCAKNDCKFNHPPQNXXXXXX 944
+GG ILPG+G+SLGEVCREYLNGRCAK DCK NHPP N
Sbjct: 129 ----------------TGGAILPGMGASLGEVCREYLNGRCAKTDCKLNHPPHNLLMTAL 172
Query: 945 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPEKAGRV 1124
SP+KAG+
Sbjct: 173 AATTSMGTLSQVPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQAQSTKDSSDSPDKAGKA 232
Query: 1125 DALKKTLQVSNLSPLLTVEQLKQLFSYCGTVVDCSITDSKHFAYIEYSKPEEATAALALN 1304
DALKKTLQVSNLSPLLT EQLKQLFS+CGTVV+C+ITDSKHFAYIEYSKPEEATAALALN
Sbjct: 233 DALKKTLQVSNLSPLLTAEQLKQLFSFCGTVVECTITDSKHFAYIEYSKPEEATAALALN 292
Query: 1305 NMDVGGRPLNVEMAKSLPPKPAILNTPVNQSSLPXXXXXXXXXXXXXXXXXXXXXXXXXX 1484
NMD+GGRPLNVEMAKSLP KPA+ + + SSLP
Sbjct: 293 NMDIGGRPLNVEMAKSLPQKPAV--SSLASSSLPMMMQQAVAMQQMQFQQALLMQQTLTA 350
Query: 1485 XXXXNRAATMKSATELASARAAEISRKLKAEGVGNE------------------------ 1592
NRAA+MKSATELA+ARAAEIS+KLKA+G+ E
Sbjct: 351 QQAANRAASMKSATELAAARAAEISKKLKADGLVTEEKETKSKSRSPSTSRARSRSKSKS 410
Query: 1593 ----EKETEIKNXXXXXXXXXXXXXXXXXIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1760
++ + K+ I Y
Sbjct: 411 PLSYQRRSRSKSRSPINYRRRSRSKSRSPISYRRRRRSRSYSPSLRFQRDRRSKSPVRSH 470
Query: 1761 HHKNYESERRYHXXXXXXXXXXXXXXXXXXXXXYSLVSRRNGSRSVSPRTRKPSKASLAS 1940
H Y+SERR + S VSRRN SRS+SP+TRK S
Sbjct: 471 HRSRYDSERRSYRDRDDIDRSKRRDLDRSRDRRSS-VSRRNRSRSISPQTRKSPPVDSDS 529
Query: 1941 PKRHRESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTSYH----------------- 2069
PK RES Y
Sbjct: 530 PKNSRESSPRVRKSSHPDSRSPRHHRRSRSSPKNDDERKLKYRKRSRSKSVDSDKKRDQI 589
Query: 2070 ---------RRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDR 2222
RRRSRS SLEG R RS + S E+ HRRRSRS S+E +V S K D
Sbjct: 590 QGEKSKHRSRRRSRSLSLEGEHRGRSRSSASSDENKLKHRRRSRSVSVERKVRSNSKIDE 649
Query: 2223 SKSEKLKIDQRNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSSDE 2402
K ++ + R + +AE +H + S S+ K + D +RS
Sbjct: 650 MKKDESRHSDRRRSRSG-SAEGRHYTKE-----------RSDRSRDKKSKHRDRRRSRSR 697
Query: 2403 KGESK-TKKSALDVNDTEKFDALQNNQIHSENNLSDSSVGKRLAASPV-----FYSKGTS 2564
E K ++S L +++ N H + S S+ GK ++ + + +
Sbjct: 698 SAEGKHHRESRLFPRNSD-----GNKIKHRRLSRSKSTEGKHRSSDKIDERSKRHDRKHL 752
Query: 2565 TSLDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNN-------SDKDGAHAVNKSLSK 2723
+S + + S+ + +S + +D+RR+ + + E N+ D D +VN
Sbjct: 753 SSAECRHPRGSRSSPRSSEDNDSRRRRRSRSKSVEGNDGILASKEEDYDSKVSVNDDQEL 812
Query: 2724 HGKSSSEYKRHEKVESVRREKAVLDDDSREGRKASDYSKSKSHRCSSKNSED 2879
GK ++ E + R LD D + S S H+ +S SE+
Sbjct: 813 KGKYLLQFSCDEGLSPNNR----LDADELSKLEGS----SSKHQLNSNGSEN 856
Score = 75.9 bits (185), Expect = 2e-10
Identities = 114/468 (24%), Positives = 178/468 (38%), Gaps = 48/468 (10%)
Frame = +3
Query: 2061 SYHRRRSRSKSLEGTSYHRRRSRSKSVEDTSNHRRRSRSKSIEDRVHSGGKRDRSKSEKL 2240
S R RSRSKS SY +RRSRSKS N+RRRSRSKS + +R RS S L
Sbjct: 398 STSRARSRSKSKSPLSY-QRRSRSKS-RSPINYRRRSRSKSRSPISYRRRRRSRSYSPSL 455
Query: 2241 KIDQ--------RNHQKDDETAEKQHIGVDDSRDGGTDVLGSSALSQKKSTLSTDDKRSS 2396
+ + R+H + +E++ D D L + + S+ +R+
Sbjct: 456 RFQRDRRSKSPVRSHHRSRYDSERRSYRDRDDIDRSK----RRDLDRSRDRRSSVSRRNR 511
Query: 2397 DEKGESKTKKSALDVNDTEKFDALQNNQIHSENNLSDSSV--GKRLAASPVFYSKGTSTS 2570
+T+KS +D+ K + ++ ++ S +R +SP
Sbjct: 512 SRSISPQTRKSPPVDSDSPKNSRESSPRVRKSSHPDSRSPRHHRRSRSSP---KNDDERK 568
Query: 2571 LDEQPHSRSKDARKSEKRSDNRRKDKVDTSKTERNNSDKDGAHAVNKSLSKHGKSSSEYK 2750
L + SRSK +KR + + S+ + +G H + S+ SS E K
Sbjct: 569 LKYRKRSRSKSVDSDKKRDQIQGEKSKHRSRRRSRSLSLEGEH---RGRSRSSASSDENK 625
Query: 2751 -------RHEKVESVRREKAVLDDDSREGRKASD-------------YSKSKSHRCSSKN 2870
R VE R + +D+ ++ + SD Y+K +S R K
Sbjct: 626 LKHRRRSRSVSVERKVRSNSKIDEMKKDESRHSDRRRSRSGSAEGRHYTKERSDRSRDKK 685
Query: 2871 SEDIGGAKDRHRS-EKRRHEITSVAEDIGSGN----FDLSETKDTPKLKSHRSSSSAEDE 3035
S+ + R RS E + H + + GN LS +K T HRSS ++
Sbjct: 686 SKHRDRRRSRSRSAEGKHHRESRLFPRNSDGNKIKHRRLSRSKSTE--GKHRSSDKIDER 743
Query: 3036 TTNDPKYSSRHERSELVKDNSEESRNLMAPNSSLEKIQERVSSFSVEEAFVDANDRGQYG 3215
S RH+R L R + S E R S ++ V+ ND
Sbjct: 744 -------SKRHDRKHLSSAECRHPRGSRSSPRSSEDNDSRRRRRSRSKS-VEGNDGILAS 795
Query: 3216 RSRVYSDKFDMFTDQ-------------DNDTDNKKFVEDELANMEKS 3320
+ Y K + DQ + + N + DEL+ +E S
Sbjct: 796 KEEDYDSKVSVNDDQELKGKYLLQFSCDEGLSPNNRLDADELSKLEGS 843