BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00003117
         (3409 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   467   e-128
ref|XP_007207211.1| hypothetical protein PRUPE_ppa001899mg [Prun...   415   e-113
ref|XP_007031278.1| Phytochrome interacting factor 3, putative i...   404   e-109
ref|XP_007031281.1| Phytochrome interacting factor 3, putative i...   399   e-108
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot...   392   e-106
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]   388   e-104
ref|XP_007031279.1| Phytochrome interacting factor 3, putative i...   387   e-104
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...   385   e-104
ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [F...   379   e-102
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr...   373   e-100
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu...   373   e-100
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]     373   e-100
ref|XP_007031280.1| Phytochrome interacting factor 3, putative i...   355   6e-95
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]     352   7e-94
ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [A...   329   5e-87
ref|XP_006605776.1| PREDICTED: transcription factor PIF3-like [G...   324   2e-85
ref|XP_004495811.1| PREDICTED: transcription factor PIF3-like is...   313   3e-82
ref|XP_004495812.1| PREDICTED: transcription factor PIF3-like is...   308   1e-80
ref|XP_006589101.1| PREDICTED: transcription factor PIF3-like [G...   298   9e-78
gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsa...   298   9e-78

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  467 bits (1202), Expect = e-128
 Identities = 313/737 (42%), Positives = 393/737 (53%), Gaps = 9/737 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MPFS+L++++ KGK ES Q K TN   DL+F P+N+FVELVWE GQI+MQGQ        
Sbjct: 1    MPFSELYRMA-KGKPESVQQK-TN---DLSFGPENDFVELVWEGGQIMMQGQSSRARKSP 55

Query: 448  XXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKFVA-DSVLNDFSSSGPSGHMGLGQEDDLV 624
                      SH  K ++KD G     K  KF + D +LNDF  S PS  MGL Q+DD+V
Sbjct: 56   LSNSFP----SHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMV 111

Query: 625  RWLNYPLD-----DDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAH 789
             WLNYP+D     D CSDF  ELSG  +N L    N    +   S+   I +DS+ +SAH
Sbjct: 112  PWLNYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTI-KDSNTISAH 170

Query: 790  GGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANNT 969
             G + +Q NA K S      ++PR      QL      Q QT  PS RS+VS+    N +
Sbjct: 171  NGVSLEQGNASKASAAGVEPSRPRSS----QLYPPSSQQCQTLFPSMRSKVSDPISNNTS 226

Query: 970  SSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-LK 1146
            ++       NS +    TSG  +TK +KQD   TR       +++G +NFSHF RP  L 
Sbjct: 227  NAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTR-------NNSGLMNFSHFSRPAALV 279

Query: 1147 TNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPLH 1326
              +LQ+  A  GP SSS  DR+ S DK  A  S N  ES  ++S+ G +       +P+ 
Sbjct: 280  KANLQNIGAIAGP-SSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVM 338

Query: 1327 MAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPDG 1506
            +   +D  P V K+ +EP     S  ICQE A    +SS+Q +G      A TA G PDG
Sbjct: 339  VPASVDLKPVVAKTMEEPLPAEQSPVICQEGACKNEKSSNQVLG------ARTAKGIPDG 392

Query: 1507 EKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPAT 1686
            EK                      NDPKH  KRK RDT              V  +K A 
Sbjct: 393  EKTIEPAVACSSVCSGNSVERAS-NDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAP 451

Query: 1687 GRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 1866
             +G T +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL
Sbjct: 452  AKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 511

Query: 1867 QLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXXX 2046
            QLQVQIMS                QH+HA HM  F P                       
Sbjct: 512  QLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP--MGVGMGMGMGMGYGMGMLDMN 569

Query: 2047 XXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPI--PRPPFIHM 2220
                 CP +Q PPM G  FP   +S P +L  M GS++Q+FGLPGQG+P+  P  P I M
Sbjct: 570  GGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQGIPLSMPHAPLIPM 629

Query: 2221 PGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSKTNSPFSEDQIATQCQ 2400
             G+P  K + +   SG+A   EV DSA  SSSKD ++N+N ++ + N   +    ++QCQ
Sbjct: 630  SGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQNVNSQVMQNNDA-NSSMASSQCQ 688

Query: 2401 VTKEGFEQSAMVQKIDQ 2451
                  EQSA+VQK DQ
Sbjct: 689  ------EQSALVQKNDQ 699


>ref|XP_007207211.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
            gi|462402853|gb|EMJ08410.1| hypothetical protein
            PRUPE_ppa001899mg [Prunus persica]
          Length = 744

 Score =  415 bits (1067), Expect = e-113
 Identities = 290/756 (38%), Positives = 392/756 (51%), Gaps = 11/756 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+ ++++  G+++S+Q           F P N+FVELVWENGQI+MQGQ        
Sbjct: 1    MPLSEFYRMA--GRVDSSQD----------FEPVNDFVELVWENGQIMMQGQSSRTRKSP 48

Query: 448  XXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKFVA-DSVLNDFSSSGPSGHMGLGQEDDLV 624
                    + S+  K+++KD G+    K  KF + +SVL++   S PS  MGL ++D+++
Sbjct: 49   TCNNS---LPSYTPKNRDKDVGNGNIAKTGKFGSVESVLDEIPLSVPSSEMGLSEDDEML 105

Query: 625  RWLNYPLDDD-----CSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAH 789
             WLNY +D+      C +F  ELS    N + +  N        SS + + RDS+  SAH
Sbjct: 106  PWLNYSIDEPLHHEYCDEFLPELSTVTANEISSNSNLASMDKRSSS-SQVYRDSNTNSAH 164

Query: 790  GGPNPDQRNAVKFSG-DAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANN 966
             G   +QRNA K +  D  + ++PR      QL      Q Q+  PS RSRVS+  G N 
Sbjct: 165  EGAYLEQRNAPKVASIDGADVSRPRTGTS--QLYPLSSQQSQSLFPSFRSRVSDIVGDNT 222

Query: 967  TSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-L 1143
             ++  P    NS+Q ++     P  KM++QD      P  PSN+++  +NFSHF RP  L
Sbjct: 223  GNATHPTVCKNSTQ-VSSAGVFPGIKMQRQD------PVMPSNNNSSVVNFSHFSRPAAL 275

Query: 1144 KTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPL 1323
              ++LQS     G   SS ++++ +  KVSA  S+N  EST+I+S+SG    +  Q Q +
Sbjct: 276  VKSNLQSIGVVAGSGLSS-MEKIGNKGKVSAATSNNPPESTLIDSSSGLSKESNSQCQHI 334

Query: 1324 HMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPD 1503
             +   ++  P   K  +E    + SEA CQEDA   + +++         C S      D
Sbjct: 335  TVTSNVELKPTEAKPLEESCAAKQSEAACQEDASKNDTNTNHIP------CESANRVLRD 388

Query: 1504 GEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPA 1683
            GEK                      +DP H  KRKSRDT              V  KK A
Sbjct: 389  GEKTLEPVVASSVCSGNSVERGS--DDPTHALKRKSRDTDESECHSDDVEEESVGVKKIA 446

Query: 1684 TGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 1863
              RG  S KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT
Sbjct: 447  HARGMGS-KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 505

Query: 1864 LQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXX 2043
            LQLQVQIMS                QHMHAP MA FSP                      
Sbjct: 506  LQLQVQIMSMGAGLYMPPMMFPAGMQHMHAPRMAHFSPMGLGMGMGMGLGMGFGMGMPDM 565

Query: 2044 XXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPIP--RPPFIH 2217
                   P++QVPPM G  FP   ++G ++   M GS++QMFGLPGQG+P+P  RPP + 
Sbjct: 566  NGGSSSFPMLQVPPMQGAHFPNSPMAGHTAFNGMVGSNLQMFGLPGQGVPMPMQRPPLVP 625

Query: 2218 MPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLK-MSKTNSPFSEDQIATQ 2394
              G P  K +      G+    E  +S   S SKD ++N+N + +  TN+  S +Q ++Q
Sbjct: 626  SSGGPFMKSSVGLNACGAGGPMENAESTPVSGSKDSVQNMNSQVVQNTNANSSMNQTSSQ 685

Query: 2395 CQVTKEGFEQSAMVQKIDQNKHDGSN*IMESSSNRN 2502
            CQ T EGF Q A+V+   Q     +N    SSS  +
Sbjct: 686  CQATNEGFGQPALVRNNVQAADVDNNRANRSSSGND 721


>ref|XP_007031278.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
            cacao] gi|508719883|gb|EOY11780.1| Phytochrome
            interacting factor 3, putative isoform 1 [Theobroma
            cacao]
          Length = 729

 Score =  404 bits (1038), Expect = e-109
 Identities = 292/743 (39%), Positives = 380/743 (51%), Gaps = 15/743 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L++++ +GKL+S+Q K  +CS DL+FVP+N+FVELV ENGQILMQGQ        
Sbjct: 1    MPLSELYRMA-RGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIP 59

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVT-PKFDKF-VADSVLNDFSSSGPSGHMGLGQEDD 618
                     + SH  K+++KD G+  T  K  KF   DSVL++   S PS  M L Q+D+
Sbjct: 60   ACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDE 119

Query: 619  LVRWLNYPLDD----DCSDFFSELSGDNLNALPAQVNAVPTKANGSSY---AHILRDSHM 777
            +V WLNYP+D     + SDF  ELSG         VN   T +N +S+   +  +RDS  
Sbjct: 120  VVPWLNYPVDQSLQSEYSDFLPELSG-------VAVNETSTHSNFASFDRRSQSIRDSCT 172

Query: 778  VSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRV-SNFN 954
            VS + G   +Q N  K    A    +PR      QL + P    QTS P  RSR+  N  
Sbjct: 173  VSLNNGAVFEQGNPSKVPTPADGEARPRSGTS--QLSTLPSQLCQTSSPFLRSRILENIG 230

Query: 955  GANNTSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLR 1134
             +   +S   A   +S        GLP  KM+KQD         P N+ T  +NFSHF R
Sbjct: 231  NSLGHTSTHHAIGGDSIGVQASDGGLPGIKMQKQDQVA------PCNN-TVLMNFSHFSR 283

Query: 1135 PT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQ 1311
            P  L    LQ+  A       + ++R+ S +K SA   S+  ++T I+S+   +     Q
Sbjct: 284  PAALVKASLQNISAI------ASIERIGSKEKGSAASISDPADTTFIDSSIDLQKEKFSQ 337

Query: 1312 GQPLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAM 1491
             QP  +  K D      KS  EP T    +AIC+E+     ++  Q  G+++S       
Sbjct: 338  CQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESAS------K 391

Query: 1492 GRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAA 1671
            G PDG+K                      +DP +  KRKSRD               V  
Sbjct: 392  GLPDGDKTVEPVLAASSVCSGNSVERAS-DDPVYNLKRKSRDNEESECPSEDAEEESVGV 450

Query: 1672 KKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 1851
            KK    RG + +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE
Sbjct: 451  KKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 510

Query: 1852 YLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXX 2031
            YLKTLQLQVQIMS                QHMHA HMA FSP                  
Sbjct: 511  YLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPDM 570

Query: 2032 XXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLP--IPRP 2205
                       P+VQVPP+HG  F   +  GP++L  M GS++Q+FGLPGQGLP  +P  
Sbjct: 571  NAGSSAR----PMVQVPPIHGAPF---SGPGPTALQGMAGSNLQLFGLPGQGLPMSMPHT 623

Query: 2206 PFIHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK-TNSPFSEDQ 2382
            P I + G    KP       G     +   SA  SSSKD ++N+N ++++ TN   S +Q
Sbjct: 624  PLIPISGGHLMKPAMGLSACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVNSSMNQ 683

Query: 2383 IATQCQVTKEGFEQSAMVQKIDQ 2451
              +QC  T + FEQ A VQ+  Q
Sbjct: 684  TPSQCPTTNQSFEQPAAVQENGQ 706


>ref|XP_007031281.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
            cacao] gi|508719886|gb|EOY11783.1| Phytochrome
            interacting factor 3, putative isoform 4 [Theobroma
            cacao]
          Length = 730

 Score =  399 bits (1026), Expect = e-108
 Identities = 292/744 (39%), Positives = 380/744 (51%), Gaps = 16/744 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L++++ +GKL+S+Q K  +CS DL+FVP+N+FVELV ENGQILMQGQ        
Sbjct: 1    MPLSELYRMA-RGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIP 59

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVT-PKFDKF-VADSVLNDFSSSGPSGHMGLGQEDD 618
                     + SH  K+++KD G+  T  K  KF   DSVL++   S PS  M L Q+D+
Sbjct: 60   ACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDE 119

Query: 619  LVRWLNYPLDD----DCSDFFSELSGDNLNALPAQVNAVPTKANGSSY---AHILRDSHM 777
            +V WLNYP+D     + SDF  ELSG         VN   T +N +S+   +  +RDS  
Sbjct: 120  VVPWLNYPVDQSLQSEYSDFLPELSG-------VAVNETSTHSNFASFDRRSQSIRDSCT 172

Query: 778  VSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRV-SNFN 954
            VS + G   +Q N  K    A    +PR      QL + P    QTS P  RSR+  N  
Sbjct: 173  VSLNNGAVFEQGNPSKVPTPADGEARPRSGTS--QLSTLPSQLCQTSSPFLRSRILENIG 230

Query: 955  GANNTSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLR 1134
             +   +S   A   +S        GLP  KM+KQD         P N+ T  +NFSHF R
Sbjct: 231  NSLGHTSTHHAIGGDSIGVQASDGGLPGIKMQKQDQVA------PCNN-TVLMNFSHFSR 283

Query: 1135 PT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQ 1311
            P  L    LQ+  A       + ++R+ S +K SA   S+  ++T I+S+   +     Q
Sbjct: 284  PAALVKASLQNISAI------ASIERIGSKEKGSAASISDPADTTFIDSSIDLQKEKFSQ 337

Query: 1312 GQPLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAM 1491
             QP  +  K D      KS  EP T    +AIC+E+     ++  Q  G+++S       
Sbjct: 338  CQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESAS------K 391

Query: 1492 GRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAA 1671
            G PDG+K                      +DP +  KRKSRD               V  
Sbjct: 392  GLPDGDKTVEPVLAASSVCSGNSVERAS-DDPVYNLKRKSRDNEESECPSEDAEEESVGV 450

Query: 1672 KKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCN-KVDKASMLDEAI 1848
            KK    RG + +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCN KVDKASMLDEAI
Sbjct: 451  KKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKKVDKASMLDEAI 510

Query: 1849 EYLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXX 2028
            EYLKTLQLQVQIMS                QHMHA HMA FSP                 
Sbjct: 511  EYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPD 570

Query: 2029 XXXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLP--IPR 2202
                        P+VQVPP+HG  F   +  GP++L  M GS++Q+FGLPGQGLP  +P 
Sbjct: 571  MNAGSSAR----PMVQVPPIHGAPF---SGPGPTALQGMAGSNLQLFGLPGQGLPMSMPH 623

Query: 2203 PPFIHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK-TNSPFSED 2379
             P I + G    KP       G     +   SA  SSSKD ++N+N ++++ TN   S +
Sbjct: 624  TPLIPISGGHLMKPAMGLSACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVNSSMN 683

Query: 2380 QIATQCQVTKEGFEQSAMVQKIDQ 2451
            Q  +QC  T + FEQ A VQ+  Q
Sbjct: 684  QTPSQCPTTNQSFEQPAAVQENGQ 707


>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus trichocarpa]
            gi|550337605|gb|ERP60050.1| Phytochrome-interacting
            factor 3 family protein [Populus trichocarpa]
          Length = 742

 Score =  392 bits (1006), Expect = e-106
 Identities = 281/751 (37%), Positives = 364/751 (48%), Gaps = 11/751 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFV-PDNEFVELVWENGQILMQGQXXXXXXX 444
            MP S+L    +KGK++ +Q K  +CS DL+FV P+N+F EL+WENGQI            
Sbjct: 1    MPLSELLYRMAKGKIDFSQEKDPSCSTDLSFVRPENDFGELIWENGQIQSS--------R 52

Query: 445  XXXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKF-VADSVLNDFSSSGPSGHMGLGQEDDL 621
                     +     K + KD G+    +  KF + +S LN+   S P+  MG+ Q+DD+
Sbjct: 53   ARKIQPCSTLPCQNPKIRYKDIGNGTDIRTGKFGMMESTLNELPMSVPAVEMGVNQDDDM 112

Query: 622  VRWLNYPLD-----DDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSA 786
            V WLNYPLD     D CS+F  ELSG  +N   +Q N         S++  +RDS  VS 
Sbjct: 113  VPWLNYPLDESPQHDYCSEFLPELSGVTVNGHSSQSNF--PSFGKKSFSQSVRDSRTVSV 170

Query: 787  HGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANN 966
            H G + +Q +  K S  A ++   R      QL  +     QTS P  RSRVS  NG + 
Sbjct: 171  HNGLSLEQGDVAKNSS-AGDTEANRPRTSASQLYLSSSEHCQTSFPYFRSRVSAKNGDST 229

Query: 967  TSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-L 1143
            +++A      +S +      G P+ KM+KQ  A        S +++  +NFSHF RP  L
Sbjct: 230  SNAAHHVVSVDSIRAPTSGGGFPSIKMQKQVPAQ-------STTNSSLMNFSHFARPAAL 282

Query: 1144 KTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPL 1323
               +LQ+     G    S ++R ++ DK S   SSN  E T I S SG          P+
Sbjct: 283  AKANLQNIGMRAGT-GISNMERTQNKDKGSIASSSNPAECTPINSCSGLLKETSSHCLPV 341

Query: 1324 HMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPD 1503
             M  K+DA P   K ++        EA   E     +R+  Q      +FC S   G  D
Sbjct: 342  LMPPKVDAKPSEAKPAEGFVPAELPEATIPEGDSKSDRNCRQ------NFCESAIKGVAD 395

Query: 1504 GEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPA 1683
             EK                      +DP    KRK RDT              V AKK A
Sbjct: 396  VEKTKEPVVASSSVGSDNSVERAS-DDPTENLKRKHRDTEESEGPSEDVEEESVGAKKQA 454

Query: 1684 TGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 1863
              R    +KR+RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT
Sbjct: 455  PARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKT 514

Query: 1864 LQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXX 2043
            LQLQVQIMS                 HMHA HM  F P                      
Sbjct: 515  LQLQVQIMSMGAGLYMPSMMLPPGMPHMHAAHMGQFLPMGVGMGMRMGMGMGFGMSMPDV 574

Query: 2044 XXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPI--PRPPFIH 2217
                  CP+ QVPPMHGP F    +SG S+L  M GS++QMFGL GQG P+  P  P + 
Sbjct: 575  NGGSSGCPMYQVPPMHGPHFSGQPMSGLSALHRMGGSNLQMFGLSGQGFPMSFPCAPLVP 634

Query: 2218 MPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSKTNSPFSE-DQIATQ 2394
            M G P  K    P   G     +  DSA   SS + ++ +N ++ + N   S  +Q ++Q
Sbjct: 635  MSGGPPLKTNMEPNACGVVGATDNLDSATACSSHEAIQKINSQVMQNNVVNSSMNQTSSQ 694

Query: 2395 CQVTKEGFEQSAMVQKIDQNKHDGSN*IMES 2487
            CQ T E FEQ A+VQ   Q+     N  ++S
Sbjct: 695  CQATNECFEQPALVQNNAQDSGVADNRALKS 725


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score =  388 bits (996), Expect = e-104
 Identities = 265/645 (41%), Positives = 326/645 (50%), Gaps = 7/645 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MPFS+L++++ KGK ES Q K TN   DL+F P+N+FVELVWE GQI+MQGQ        
Sbjct: 1    MPFSELYRMA-KGKPESVQQK-TN---DLSFGPENDFVELVWEGGQIMMQGQSSRARKSP 55

Query: 448  XXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKFVA-DSVLNDFSSSGPSGHMGLGQEDDLV 624
                      SH  K ++KD G     K  KF + D +LNDF  S PS  MGL Q+DD+V
Sbjct: 56   LSNSFP----SHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMV 111

Query: 625  RWLNYPLD-----DDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAH 789
             WLNYP+D     D CSDF  ELSG  +N L    N    +   S+   I +DS+ +SAH
Sbjct: 112  PWLNYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTI-KDSNTISAH 170

Query: 790  GGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANNT 969
             G + +Q NA K S      ++PR      QL      Q QT  PS RS+VS+    N +
Sbjct: 171  NGVSLEQGNASKASAAGVEPSRPRSS----QLYPPSSQQCQTLFPSMRSKVSDPISNNTS 226

Query: 970  SSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-LK 1146
            ++       NS +    TSG  +TK +KQD   TR       +++G +NFSHF RP  L 
Sbjct: 227  NAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQTR-------NNSGLMNFSHFSRPAALV 279

Query: 1147 TNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPLH 1326
              +LQ+  A  GP SSS  DR+ S DK  A  S N  ES  ++S+ G +       +P+ 
Sbjct: 280  KANLQNIGAIAGP-SSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVM 338

Query: 1327 MAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPDG 1506
            +   +D  P V K+ +EP     S                            TA G PDG
Sbjct: 339  VPASVDLKPVVAKTMEEPLPAEQSPVHLPR---------------------RTAKGIPDG 377

Query: 1507 EKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPAT 1686
            EK                      NDPKH  KRK RDT              V  +K A 
Sbjct: 378  EKSIEPAVACSSVCSGNSVERAS-NDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAP 436

Query: 1687 GRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 1866
             +G T +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL
Sbjct: 437  AKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 496

Query: 1867 QLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXXX 2046
            QLQVQIMS                QH+HA HM  F P                       
Sbjct: 497  QLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP--MGVGMGMGMGMGYGMGMLDMN 554

Query: 2047 XXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPG 2181
                 CP +Q PPM G  FP   +S P +L  M GS++Q+FGLPG
Sbjct: 555  GGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPG 599


>ref|XP_007031279.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
            cacao] gi|508719884|gb|EOY11781.1| Phytochrome
            interacting factor 3, putative isoform 2 [Theobroma
            cacao]
          Length = 731

 Score =  387 bits (994), Expect = e-104
 Identities = 282/729 (38%), Positives = 370/729 (50%), Gaps = 17/729 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L++++ +GKL+S+Q K  +CS DL+FVP+N+FVELV ENGQILMQGQ        
Sbjct: 1    MPLSELYRMA-RGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIP 59

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVT-PKFDKF-VADSVLNDFSSSGPSGHMGLGQEDD 618
                     + SH  K+++KD G+  T  K  KF   DSVL++   S PS  M L Q+D+
Sbjct: 60   ACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDE 119

Query: 619  LVRWLNYPLDD----DCSDFFSELSGDNLNALPAQVNAVPTKANGSSY---AHILRDSHM 777
            +V WLNYP+D     + SDF  ELSG         VN   T +N +S+   +  +RDS  
Sbjct: 120  VVPWLNYPVDQSLQSEYSDFLPELSG-------VAVNETSTHSNFASFDRRSQSIRDSCT 172

Query: 778  VSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRV-SNFN 954
            VS + G   +Q N  K    A    +PR      QL + P    QTS P  RSR+  N  
Sbjct: 173  VSLNNGAVFEQGNPSKVPTPADGEARPRSGTS--QLSTLPSQLCQTSSPFLRSRILENIG 230

Query: 955  GANNTSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLR 1134
             +   +S   A   +S        GLP  KM+KQD         P N+ T  +NFSHF R
Sbjct: 231  NSLGHTSTHHAIGGDSIGVQASDGGLPGIKMQKQDQVA------PCNN-TVLMNFSHFSR 283

Query: 1135 PT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQ 1311
            P  L    LQ+  A       + ++R+ S +K SA   S+  ++T I+S+   +     Q
Sbjct: 284  PAALVKASLQNISAI------ASIERIGSKEKGSAASISDPADTTFIDSSIDLQKEKFSQ 337

Query: 1312 GQPLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAM 1491
             QP  +  K D      KS  EP T    +AIC+E+     ++  Q  G+++S       
Sbjct: 338  CQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESAS------K 391

Query: 1492 GRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAA 1671
            G PDG+K                      +DP +  KRKSRD               V  
Sbjct: 392  GLPDGDKTVEPVLAASSVCSGNSVERAS-DDPVYNLKRKSRDNEESECPSEDAEEESVGV 450

Query: 1672 KKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 1851
            KK    RG + +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE
Sbjct: 451  KKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 510

Query: 1852 YLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXX 2031
            YLKTLQLQVQIMS                QHMHA HMA FSP                  
Sbjct: 511  YLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPDM 570

Query: 2032 XXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLP--IPRP 2205
                       P+VQVPP+HG  F   +  GP++L  M GS++Q+FGLPGQGLP  +P  
Sbjct: 571  NAGSSAR----PMVQVPPIHGAPF---SGPGPTALQGMAGSNLQLFGLPGQGLPMSMPHT 623

Query: 2206 PFIHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK---TNSPFSE 2376
            P I + G    KP       G     +   SA  SSSKD ++N+N ++++    NS  ++
Sbjct: 624  PLIPISGGHLMKPAMGLSACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVNSSMNQ 683

Query: 2377 DQIATQCQV 2403
               + Q Q+
Sbjct: 684  TPSSVQQQI 692


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
            gi|223548548|gb|EEF50039.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 758

 Score =  385 bits (989), Expect = e-104
 Identities = 289/762 (37%), Positives = 372/762 (48%), Gaps = 17/762 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESA-QPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXX 444
            MP S+L    SKGK +S+ Q K T CS DL+  P+N+F+ELVWENGQI            
Sbjct: 1    MPLSELICRLSKGKFDSSSQEKNTTCSTDLSAGPENDFLELVWENGQIQSSRARKISNG- 59

Query: 445  XXXXXXXGFMMSHMSKSQEKDQ----GDAVTPKFDKFVA-DSVLNDFSSSGPSGHMGLGQ 609
                     + S  SK ++KD     G+    K  +F A D  L++   S PS  MGL Q
Sbjct: 60   ---------VQSQTSKFRDKDISIGIGNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLNQ 110

Query: 610  EDDLVRWLNYPLDDD-----CSDFFSELSGDNLNALPAQVNAVPTK-ANGSSYAHILRDS 771
            EDD+V WLN P+DD      C +F +ELSG  +N       A   K  NG+     +RDS
Sbjct: 111  EDDMVPWLNDPIDDSLQQDYCHEFLAELSGVTVNEHAQNSFASSDKKCNGNQS---VRDS 167

Query: 772  HMVSAHGGPNPDQRNAVKFS-GDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSN 948
            H  S H G + +Q +  + S G   ++T+ R      QL S+   Q Q S P  RSR+S 
Sbjct: 168  HTASVHNGLSLEQGHMPRVSSGRDGDATRSRTTAS--QLYSSSVQQCQASFPHFRSRISA 225

Query: 949  FNGANNTSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHF 1128
             N  +  +S   A   +  +      G P+ K +KQ      P    +NSS   +NFSHF
Sbjct: 226  NNAESTNNSTHVASSGDPIRGSPSGGGFPSIKAQKQV-----PVLATTNSS--LMNFSHF 278

Query: 1129 LRPT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAG 1305
             RP  L   + ++     G   SS ++R+ S DK S   SSN  ES + E+ SG +    
Sbjct: 279  SRPVALAKANFENIGTRAGSGISS-IERIGSQDKGSIASSSNPAESMLNETFSGLKKETS 337

Query: 1306 YQGQPLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCAST 1485
             + +P+ ++ K+D  P   + ++EP   +  EA+  +    KN            F AS 
Sbjct: 338  SRCRPVMVSSKVDDKPLDHRPAEEPLLAKQPEAMENDCKNDKNHCQ---------FAASA 388

Query: 1486 AMGRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXV 1665
              G  DGEK                      ++P    KRK R+T              V
Sbjct: 389  TKGLADGEKTAEPIVASSSVCSGNSMERVS-DEPMQNLKRKHRETEESEGPSEDVEEESV 447

Query: 1666 AAKKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 1845
              KK A  RG T +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA
Sbjct: 448  GGKKAAPARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 507

Query: 1846 IEYLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXX 2025
            IEYLKTLQLQVQIMS                 HMH  HM+ FSP                
Sbjct: 508  IEYLKTLQLQVQIMSMGAGLYMPSMMLPPGVPHMHVAHMSQFSP--------MGVGMGFG 559

Query: 2026 XXXXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPIPR- 2202
                        C ++QVPPMHG  FP   +SGPS+L  M GS++ MFGL  QG P+P  
Sbjct: 560  MGMPDMIGGSSGCSMIQVPPMHGAHFPSPPMSGPSALHGMGGSNLPMFGLSSQGHPMPYL 619

Query: 2203 -PPFIHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNL-KMSKTNSPFSE 2376
             PP + M G P  + T      G A   +  DSA  SSSKD + N+N   +    +  S 
Sbjct: 620  CPPVMPMSGGPLLRTTLGLNAGGVAGPTDNLDSAPGSSSKDSIRNVNSHSIQNGGANSSM 679

Query: 2377 DQIATQCQVTKEGFEQSAMVQKIDQNKHDGSN*IMESSSNRN 2502
            +Q +TQCQVT E FEQ A+VQ   Q     S  +  +  N N
Sbjct: 680  NQTSTQCQVTNERFEQPALVQSSAQASEVDSGALKSADENDN 721


>ref|XP_004302325.1| PREDICTED: transcription factor PIF3-like [Fragaria vesca subsp.
            vesca]
          Length = 710

 Score =  379 bits (972), Expect = e-102
 Identities = 284/738 (38%), Positives = 368/738 (49%), Gaps = 13/738 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L    S+G+ +S Q           F P ++ VELVWENGQI+MQ Q        
Sbjct: 1    MPLSEL---LSRGRSDSNQD----------FEPLSDLVELVWENGQIMMQSQSNRARKSP 47

Query: 448  XXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKFVA-DSVLNDFSSSGPSGHMGLGQEDDLV 624
                    + SH  +++++D G+    K  KF + +SV+++   S PSG MGL  +DD++
Sbjct: 48   TFNS----LPSHTPRNRDRDLGNGSNGKMGKFGSVNSVIDEIPLSVPSGEMGLSDDDDML 103

Query: 625  RWLNYPLDDDCS-----DFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAH 789
             WLNY LD         DF  E+S    N +    N  P     SS + + R+S+  S  
Sbjct: 104  PWLNYALDQPLQHEYSHDFMPEISDVTANEISTNGNLTPIDKRSSS-SQMYRESNTNST- 161

Query: 790  GGPNPDQRNAVKFSG-DAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANN 966
              P  +QRN  K S   A  +++PR         S+  PQ   SIPS RS  S+  G N 
Sbjct: 162  --PGLEQRNVSKLSSVSAAEASRPRTSTTHLYQMSSQQPQ--ASIPSLRSIASDMVGGNT 217

Query: 967  TSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPTLK 1146
            +S+A  A   NS Q  +   G P   M+KQ+     PP+  +N+ST  +NFSHF R +L 
Sbjct: 218  SSAAHHAVCKNSIQ-ASPAGGFPGIPMQKQN-----PPTSSNNNST-IVNFSHFSRSSLL 270

Query: 1147 TNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPLH 1326
                              V+++++ DKVSA  SSN  ES +IES+ G    +  Q Q + 
Sbjct: 271  R-----------------VEKIKNKDKVSAATSSNPPESILIESSCGLMKESTSQCQDVM 313

Query: 1327 MAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKN--RSSDQAVGQTSSFCASTAMGRP 1500
                +D  P   K  +EP TT+ SEA   ++   KN  R+S+         C S     P
Sbjct: 314  APSSVDMKPTASKPLEEPHTTKQSEAAAYQEDPSKNDDRNSNHIP------CESAIRPLP 367

Query: 1501 DGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKP 1680
            D EK                      +DP  + KRKSRDT              V  KK 
Sbjct: 368  DVEKTTEPVVDSSVCSVNSVEKAS--DDPTRVLKRKSRDTDDSECHSEDVEEESVGVKKK 425

Query: 1681 -ATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 1857
             A GRG T +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL
Sbjct: 426  VAHGRG-TGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 484

Query: 1858 KTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXX 2037
            KTLQLQVQIMS                QHMHAPHMA FS                     
Sbjct: 485  KTLQLQVQIMSMGAGLYMPQMMLPPGMQHMHAPHMAHFSHMGMGMGMGMGLGMGFGMGLP 544

Query: 2038 XXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQG--LPIPRPPF 2211
                     P++QVPPM G  FP   +SG ++   M GS++QMFGLPGQG  +P+ RPP 
Sbjct: 545  DMNGGSSGYPMLQVPPMQGAHFPGSPMSGHTAFNGMIGSNLQMFGLPGQGVSMPMQRPPL 604

Query: 2212 IHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLK-MSKTNSPFSEDQIA 2388
            + + G    K    P   G+    E  + A  +SSKD ++N+N + M   N+  S +Q  
Sbjct: 605  VPISGGSFMKSAIGPNACGAGGPVENMEPAPGTSSKDSVQNMNSQIMQNINTSSSMNQ-- 662

Query: 2389 TQCQVTKEGFEQSAMVQK 2442
            T  Q T EGF QSA+VQK
Sbjct: 663  TSNQATNEGFGQSALVQK 680


>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
            gi|567862616|ref|XP_006423962.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
            factor PIF3-like [Citrus sinensis]
            gi|557525895|gb|ESR37201.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
            gi|557525896|gb|ESR37202.1| hypothetical protein
            CICLE_v10027890mg [Citrus clementina]
          Length = 735

 Score =  373 bits (958), Expect = e-100
 Identities = 280/737 (37%), Positives = 365/737 (49%), Gaps = 13/737 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP  +L+Q++ K KL+SA+ K  + S DL+F P+N+ VELVWENGQIL QGQ        
Sbjct: 1    MPLFELYQMT-KEKLDSAKQKNPSSSTDLSFEPENDLVELVWENGQILKQGQSSRTKKSP 59

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVTPKFDKFVADSVLNDFSSSGPSGHMGLGQEDDLV 624
                   + + SH  K+++KD G   T KF     D++LN    S PSG MGL Q+DD+V
Sbjct: 60   TSNSLPSYCLRSHTPKNRDKDLGK--TGKFG--TVDAMLNGIQMSDPSGEMGLNQDDDMV 115

Query: 625  RWLNYPLD-----DDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAH 789
             WLNY +D     D CSDF  ELSG   N L +Q N        SS     R+ + V  +
Sbjct: 116  PWLNYAVDESLQQDYCSDFLHELSGVTGNELSSQNNFASFDKRSSSN-QFDREFNSVFGN 174

Query: 790  GGPNPDQRNAVKFSG-DAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANN 966
             G   +  N  K S      +T+PR         S+   Q QTS+P+ RS VS+      
Sbjct: 175  HGARLEHGNVSKVSSVGGGEATRPRSSTNSVYTSSSQ--QCQTSLPNLRSGVSDSTSNGI 232

Query: 967  TSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-L 1143
             +S     F  S  N   T  L   K+ KQD          S +++G +NFSHF RP  L
Sbjct: 233  KNSTDNGIFQGS--NPTATGNLSGLKLHKQD-------QRLSANNSGVMNFSHFARPVAL 283

Query: 1144 KTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPL 1323
               +LQ+  + PG   S  ++R+ S DK S++ S + +ES +I+S+   R  +  Q  P 
Sbjct: 284  VRANLQNIGSMPGARLSR-IERMGSKDK-SSVASRSPVESPLIDSSGCLRKESSCQ--PA 339

Query: 1324 HMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPD 1503
             +  K+D  P   KSS++P +    EA C+EDA   ++   Q   +      S   G  +
Sbjct: 340  AVTSKVDVKPQEAKSSEQPVS-EPPEAACREDALNNDKKPSQVHAE------SATKGVVE 392

Query: 1504 GEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRK--SRDTXXXXXXXXXXXXXXVAAKK 1677
             EK                      + P H  KRK    D               V  KK
Sbjct: 393  SEKTVEPVVAASSVCSGNSVERASDDLP-HNVKRKHCDLDDSECPSEEQDVEEESVGVKK 451

Query: 1678 PATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 1857
               GR  T +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL
Sbjct: 452  QVPGRVGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 511

Query: 1858 KTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXX 2037
            KTLQLQVQIMS                QHMHA HMA F P                    
Sbjct: 512  KTLQLQVQIMSMGAGFYMPPMMYPSGMQHMHAAHMAHFPPMGIGMGMGIGYGMGMPDING 571

Query: 2038 XXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQG--LPIPRPPF 2211
                     P+VQVP MHG  FP  +VSGPS+L  M GS+ Q+ GLP QG  + +P  P 
Sbjct: 572  GSSCY----PMVQVPAMHGAHFPGTSVSGPSALQGMAGSNFQLLGLPAQGHHMSMPHAPL 627

Query: 2212 IHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK-TNSPFSEDQIA 2388
              + G P  K       +G     +  D+A  S+SKD ++N+N ++ + T +    DQ +
Sbjct: 628  NPLSGGPIMKSAMGLNPTGMVGSMDNTDAAKGSTSKDLVQNVNSQVKQNTGAKGPVDQAS 687

Query: 2389 TQCQVTKEGFEQSAMVQ 2439
             QC+ T E   + A VQ
Sbjct: 688  GQCEATNESSAEPAAVQ 704


>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
            gi|550324617|gb|EEE95373.2| hypothetical protein
            POPTR_0013s00310g [Populus trichocarpa]
          Length = 713

 Score =  373 bits (958), Expect = e-100
 Identities = 279/753 (37%), Positives = 363/753 (48%), Gaps = 12/753 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L    +KGK +S+Q K   CS DL+FVP+N+F EL+WENGQI             
Sbjct: 1    MPLSELLYRMAKGKTDSSQEKNPACSTDLSFVPENDFGELIWENGQIQYSRARKIQTCN- 59

Query: 448  XXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKF-VADSVLNDFSSSGPSGHMGLGQEDDLV 624
                      S   K ++KD G+    K  KF   +S LN+  +  P+  +   Q+DD+V
Sbjct: 60   ----------SLPPKIRDKDIGNGTNTKTGKFGTMESTLNELLAV-PAVEVRANQDDDMV 108

Query: 625  RWLNYPLD-----DDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAH 789
             WLNYPLD     D CSDF  ELSG  +N   +Q N         + +  + DSH VS H
Sbjct: 109  PWLNYPLDEPLQHDYCSDFLPELSGVTVNEHSSQSNFPSFDKRSCNQS--ITDSHTVSVH 166

Query: 790  GGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANNT 969
             G N +Q + V  S       K R      QL  +   Q +TS P  RSR S     + +
Sbjct: 167  NGLNLEQGDVVMNSSAGDIDAK-RPRTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTS 225

Query: 970  SSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-LK 1146
            ++       +S +      G P+ KM+KQ  AP+     P NSS   +NFSHF RP  L 
Sbjct: 226  NAVHHVIAPDSIRAPTSGGGFPSIKMQKQVPAPS-----PINSS--LINFSHFARPAALV 278

Query: 1147 TNHLQSC--RAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQP 1320
              +LQ+   RA+ G   +S ++R+++ DK    GS  + + T                +P
Sbjct: 279  KANLQNVGMRASSG---TSSMERMQNKDK----GSIGLPKETDSHC------------RP 319

Query: 1321 LHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRP 1500
              M+ K++  P   K ++        E + QE     +R+  Q  G+      S   G  
Sbjct: 320  NMMSSKVEVKPTEVKPAEGSVPAELPEEMSQEGDSKSDRNCHQNFGE------SAIKGLE 373

Query: 1501 DGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKP 1680
            D EK                      +DP    KRK RDT              V AKKP
Sbjct: 374  DVEKTTEPLVASSSVGSGNSAERPS-DDPTENLKRKHRDTEESEGPSEDAEEESVGAKKP 432

Query: 1681 ATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 1860
            A+ R    +KR RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK
Sbjct: 433  ASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 492

Query: 1861 TLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXX 2040
            TLQLQVQIMS                 HMHA HM  F P                     
Sbjct: 493  TLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQFLP------MGVGMGMGFRMGMPD 546

Query: 2041 XXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPI--PRPPFI 2214
                   CP+ QVPPMHG  FP   +SGPS+L  M G S+QMFGL GQGLP+  PR P +
Sbjct: 547  MNGGYSGCPMYQVPPMHGAHFPGSQMSGPSALHGMGGPSLQMFGLSGQGLPMSFPRAPLM 606

Query: 2215 HMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSKTN-SPFSEDQIAT 2391
             M G P  K    P   G     +  DSA  SSSKD ++N+N ++ + N +  S +Q ++
Sbjct: 607  PMSGGPPPKTNREPNACGVVGPMDNLDSATASSSKDAIQNINSQVMQNNVANRSMNQTSS 666

Query: 2392 QCQVTKEGFEQSAMVQKIDQNKHDGSN*IMESS 2490
            QCQ T E FEQ A  Q   +      + +++S+
Sbjct: 667  QCQATNECFEQPAFAQNNGEGSEVAESGVLKSA 699


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus domestica]
          Length = 713

 Score =  373 bits (957), Expect = e-100
 Identities = 277/743 (37%), Positives = 373/743 (50%), Gaps = 19/743 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MPFS+L++++  G+++S+Q  +            N+F+ELVWENGQ++MQGQ        
Sbjct: 1    MPFSELYRMA--GRVDSSQDFE------------NDFLELVWENGQVVMQGQSSRTRKNP 46

Query: 448  XXXXXXGFMMSHMSKSQEKDQGDAVTPKFDKF--VADSVLNDFSSSGPSGHMGLGQEDDL 621
                   +   +  K++++D G++   K  KF  V DS L++   S PS  MGL ++DD 
Sbjct: 47   SCNTLPSY---NTPKNRDRDVGNSNIGKTGKFGFVVDSELDEIPLSVPSSEMGLSEDDDT 103

Query: 622  VRWLNYPLDDD-----CSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSA 786
            + WLNY +D+      C DF  E S    N   +  N        SS + +LRDS+  SA
Sbjct: 104  LPWLNYSIDEPLHHEYCHDFLPEFSSATANEASSNHNLASIDKRSSS-SQVLRDSNPNSA 162

Query: 787  HGGPNPDQRNAVKFS--GDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGA 960
            H      QRN  K +  G A  S   R      QL S    Q Q S PS RSRVS+  G 
Sbjct: 163  HEDACLQQRNVGKVALIGRADVS---RPRTGTSQLHSLSSQQSQASYPSFRSRVSDTAG- 218

Query: 961  NNTSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT 1140
            +NTS+       NS+Q ++   G P  K+ + D      P  PSN++   +NFSHF RP 
Sbjct: 219  DNTSATHRDVGKNSTQ-ISSAGGSPGMKILRPD------PVTPSNNNPSIVNFSHFSRPA 271

Query: 1141 -LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQ 1317
             L   ++Q+     G  SSS + R+ + DK SA  S+N+ ES  I+S+S +   +  Q Q
Sbjct: 272  ALVKANVQTNGVMAGSGSSSMI-RIANKDKFSAATSNNLPESMPIDSSSSAPKESNSQCQ 330

Query: 1318 PLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGR 1497
             + +   ++  P   K  +EP T + SE  CQE+      +S   +      C S     
Sbjct: 331  QILVRSSVELKPTEAKPLEEPCTAKQSEGTCQEE------TSKDDINSNHIPCESAVRVS 384

Query: 1498 PDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKK 1677
            P+GEK                      +DP    KRK R+T              +  KK
Sbjct: 385  PNGEKTVEPVVASSVCSGNSVERGS--DDPTQALKRKFRETDESECHSDDVEEEYMGVKK 442

Query: 1678 PATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 1857
                RG  S KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL
Sbjct: 443  GDHARGMGS-KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYL 501

Query: 1858 KTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXX 2037
            KTLQLQVQ+MS                QHMH P MA FSP                    
Sbjct: 502  KTLQLQVQMMSMGAGMYMPPMMLPPGMQHMHGPCMAHFSPMGVGMGMGMGLGMGFGMGMP 561

Query: 2038 XXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPIPRPPFIH 2217
                     P++QVPPM G  FP   ++G ++   M GS++QMFGLP QG+P+P      
Sbjct: 562  DMNGASSSYPMLQVPPMQGAHFPGSHMAGHTAFNGMMGSNLQMFGLPSQGVPVP------ 615

Query: 2218 MPGAPSAKPTSSPIVSGSANVE--------EVRDSALHSSSKDEMENLNLK-MSKTNSPF 2370
            M  AP A  ++ P V  SA +         E  +SA  S SKD ++N+N + M  +N+  
Sbjct: 616  MQRAPLAPSSAGPFVKSSAGLNAGSSGGPVENVESAPVSGSKDSVQNMNSQAMQNSNANS 675

Query: 2371 SEDQIATQCQVTKEGFEQSAMVQ 2439
            S +Q ++Q Q T EGF QSA+V+
Sbjct: 676  SMNQTSSQGQATNEGFGQSALVR 698


>ref|XP_007031280.1| Phytochrome interacting factor 3, putative isoform 3 [Theobroma
            cacao] gi|508719885|gb|EOY11782.1| Phytochrome
            interacting factor 3, putative isoform 3 [Theobroma
            cacao]
          Length = 709

 Score =  355 bits (912), Expect = 6e-95
 Identities = 272/743 (36%), Positives = 360/743 (48%), Gaps = 15/743 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L++++ +GKL+S+Q K  +CS DL+FVP+N+FVELV ENGQILMQGQ        
Sbjct: 1    MPLSELYRMA-RGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIP 59

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVT-PKFDKF-VADSVLNDFSSSGPSGHMGLGQEDD 618
                     + SH  K+++KD G+  T  K  KF   DSVL++   S PS  M L Q+D+
Sbjct: 60   ACNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDE 119

Query: 619  LVRWLNYPLDD----DCSDFFSELSGDNLNALPAQVNAVPTKANGSSY---AHILRDSHM 777
            +V WLNYP+D     + SDF  ELSG         VN   T +N +S+   +  +RDS  
Sbjct: 120  VVPWLNYPVDQSLQSEYSDFLPELSG-------VAVNETSTHSNFASFDRRSQSIRDSCT 172

Query: 778  VSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRV-SNFN 954
            VS + G   +Q N  K    A    +PR      QL + P    QTS P  RSR+  N  
Sbjct: 173  VSLNNGAVFEQGNPSKVPTPADGEARPRSGTS--QLSTLPSQLCQTSSPFLRSRILENIG 230

Query: 955  GANNTSSAQPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLR 1134
             +   +S   A   +S        GLP  KM+KQD         P N+ T  +NFSHF R
Sbjct: 231  NSLGHTSTHHAIGGDSIGVQASDGGLPGIKMQKQDQVA------PCNN-TVLMNFSHFSR 283

Query: 1135 PT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQ 1311
            P  L    LQ+  A       + ++R+ S +K SA   S+  ++T I+S+   +     Q
Sbjct: 284  PAALVKASLQNISAI------ASIERIGSKEKGSAASISDPADTTFIDSSIDLQKEKFSQ 337

Query: 1312 GQPLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAM 1491
             QP  +  K D      KS  EP T    +AIC+E+     ++  Q  G+++S       
Sbjct: 338  CQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKNVKNPSQVTGESAS------K 391

Query: 1492 GRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAA 1671
            G PDG+K                      +DP +  KRKSRD               V  
Sbjct: 392  GLPDGDKTVEPVLAASSVCSGNSVERAS-DDPVYNLKRKSRDNEESECPSEDAEEESVGV 450

Query: 1672 KKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIE 1851
            KK    RG + +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK            
Sbjct: 451  KKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK------------ 498

Query: 1852 YLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXX 2031
                    VQIMS                QHMHA HMA FSP                  
Sbjct: 499  --------VQIMSMGAGLYMPPMMLPTGMQHMHAAHMAHFSPMGVGLGMGMGFGMPLPDM 550

Query: 2032 XXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLP--IPRP 2205
                       P+VQVPP+HG  F   +  GP++L  M GS++Q+FGLPGQGLP  +P  
Sbjct: 551  NAGSSAR----PMVQVPPIHGAPF---SGPGPTALQGMAGSNLQLFGLPGQGLPMSMPHT 603

Query: 2206 PFIHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK-TNSPFSEDQ 2382
            P I + G    KP       G     +   SA  SSSKD ++N+N ++++ TN   S +Q
Sbjct: 604  PLIPISGGHLMKPAMGLSACGLVGPMDNMGSATASSSKDPVQNINSQVAQNTNVNSSMNQ 663

Query: 2383 IATQCQVTKEGFEQSAMVQKIDQ 2451
              +QC  T + FEQ A VQ+  Q
Sbjct: 664  TPSQCPTTNQSFEQPAAVQENGQ 686


>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
          Length = 758

 Score =  352 bits (903), Expect = 7e-94
 Identities = 280/753 (37%), Positives = 361/753 (47%), Gaps = 29/753 (3%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP S+L++++ K +++S Q           F   N+  ELVWENGQI  QGQ        
Sbjct: 1    MPLSELYRLA-KRRVDSNQD----------FENGNDVFELVWENGQITTQGQSSRVRKEP 49

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVTPKFDKF-VADSVLNDFSSSGPSGHMGLGQEDDL 621
                     + S+  KS++KD G+  T K  KF   DSVLN+   S PS  +GL  +DD+
Sbjct: 50   TCNSLPSHCLPSYTPKSRDKDLGNGTTTKTGKFGTVDSVLNEIPMSVPSDGVGLSHDDDM 109

Query: 622  VRWLNYPLDDD-----CSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSA 786
            + WLNYP+D       C DF  ELSG  +N +    N   T  + SS   + R+S+  S 
Sbjct: 110  MPWLNYPMDGSLQHEYCRDFLPELSGVTVNEISKSNNNFATN-DKSSCNQLYRESNANSV 168

Query: 787  HGGPNPDQRNAVKFSGD---APNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNG 957
                + +QRN     G    +  ST+PR         S+   Q Q S PS RSRV +  G
Sbjct: 169  DYCASLEQRNNSSKVGSVVASDVSTRPRTGTSQLYSSSSS-QQCQASFPSFRSRVLDTVG 227

Query: 958  ANNTSSAQPAPFWNSSQNLNFTSGLPNTKME-KQDTAPTRPPSHPSNSSTGFLNFSHFLR 1134
             N TS+A  A   N S  ++   G P+ KM  +QD+ P      PSNS    LNFSHF R
Sbjct: 228  DNTTSAAHHA-VCNDSGRVSSVGGFPSLKMHNRQDSIP------PSNSFN-VLNFSHFTR 279

Query: 1135 PT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQ 1311
            P  L    LQ+    PG         + + +K  A   +N  +S +I++ SG R      
Sbjct: 280  PAALAKASLQNIGTMPG-------SNMPNKEKGCAANGNNPPKSGLIDTGSGLRKETSAH 332

Query: 1312 GQPLHMAGKLDAMPPVDKSSKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAM 1491
             Q +  +G ++  P   +S +EP   + SEA+C+EDA   + ++       S  C ST  
Sbjct: 333  CQVVASSG-VNLKPSEARSLEEPCAAKDSEAVCREDASKNDINN-------SFPCESTNR 384

Query: 1492 GRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAA 1671
              PDGEK                      +DP H+ KRK RDT              V  
Sbjct: 385  ALPDGEKNIEPVVASSSVCSGNSVERAS-DDPTHVLKRKFRDTEDSECHSEDVEEESVGV 443

Query: 1672 KKPATGRGSTSTKRSRAAEVHNLSER-------------RRRDRINEKMRALQELIPNCN 1812
            KK A  R S S KRSRAAEVHNLSER             RRRDRINEKMRALQELIPNCN
Sbjct: 444  KKTAPPRASGS-KRSRAAEVHNLSERILNGFFIFHLSEQRRRDRINEKMRALQELIPNCN 502

Query: 1813 KVDKASMLDEAIEYLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXX 1992
            KVDKASMLDEAIEYLKTLQLQVQIMS                Q MHAPHM  F P     
Sbjct: 503  KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLCMPPMMLPTGMQPMHAPHMTHFLPMGVGM 562

Query: 1993 XXXXXXXXXXXXXXXXXXXXXXXCPLVQVPPMHGPKFPCGTVSG-PSSLPMMTGSSVQMF 2169
                                    P+ Q PPM G  FP   + G  ++   MTG ++Q+F
Sbjct: 563  GMGLGMGFGMGMPDMNGGSSGY--PMFQFPPMQGAHFPGPPMPGHTAAFHGMTGPNLQVF 620

Query: 2170 GLPGQGL--PIPRPPFIHMPGAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNL 2343
            GLPGQGL  P+ R P + + G P  K       SG+    E  +S    +SKD  +N+  
Sbjct: 621  GLPGQGLSMPMQRAPLVPVLGGPFMKSAMGLNASGAGGSMENMESTQPYTSKDPAQNMGS 680

Query: 2344 KMSKTNSPFSE-DQIATQCQVTKEGFEQSAMVQ 2439
             + +   P S  +Q  +QCQ T EGFEQS +VQ
Sbjct: 681  HVVQNAGPSSSMNQTNSQCQATNEGFEQSPLVQ 713


>ref|XP_006840391.1| hypothetical protein AMTR_s00045p00141060 [Amborella trichopoda]
            gi|548842109|gb|ERN02066.1| hypothetical protein
            AMTR_s00045p00141060 [Amborella trichopoda]
          Length = 781

 Score =  329 bits (844), Expect = 5e-87
 Identities = 263/725 (36%), Positives = 350/725 (48%), Gaps = 22/725 (3%)
 Frame = +1

Query: 364  PDNEFVELVWENGQILMQGQXXXXXXXXXXXXXXGFMMSHMSKSQ-EKDQGDAVTPKFDK 540
            PD+EFVEL+WENGQI++QGQ                  SH  K+    + GDAV P   K
Sbjct: 110  PDHEFVELLWENGQIVLQGQTSRNRKDASSSGYS----SHPPKTHLNHNSGDAVLPVASK 165

Query: 541  F----VADSVLNDFSSSGPSGHMGLGQEDDLVRWLNYPLDDD-----CSDFFSELSGDNL 693
                   +SVL+DFSS   SG   L QED++V WLNYPLDD      CS+FF ELSG NL
Sbjct: 166  GGRYGTLESVLHDFSSGQASG-CPLVQEDEMVPWLNYPLDDSLERDYCSEFFPELSGVNL 224

Query: 694  NALPAQVNAVPTKANGSSYAHILRDSHMVSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXX 873
              L    N V ++       ++   SH           +  +++ S  AP+  +      
Sbjct: 225  TPLSKPTNVVVSE----KACNLDTTSH-----------KNLSMEHSSQAPSRLRA----- 264

Query: 874  XXQLRSAPFPQFQTSIPSPRSRVSNFNGANNTSSAQPAPFWNSSQNLNFTSGLPNTKMEK 1053
               L+     Q Q S P  R   SN + ++  +S+ P          N   G+ N+K E+
Sbjct: 265  ---LQPFNSQQGQPSNPILRQFPSNTHKSSCGNSSSPGA--------NPAIGIVNSKTEQ 313

Query: 1054 QDTAPTRPPSHPSNSSTGFLNFSHFLRPT-LKTNHLQSCRAAPGPPSSSGVDRLRSNDKV 1230
             +   TRPP     + T  +NFSHF RP  L   +LQS   A          RL++N+  
Sbjct: 314  PNHGSTRPPQP---THTNLMNFSHFSRPAALVKANLQSMGMA---------GRLKNNNDK 361

Query: 1231 SAMGSSNVIESTVIEST----SGSRSIAGYQGQPLH--MAGKLDAMPPVDKSSKEPTTTR 1392
            +++  SN +ES++++S     SG   +       LH   A  + + P  +K S E     
Sbjct: 362  ASVTDSNPVESSIVDSAVVSKSGKTKLDQQCQASLHPTKAKDISSSPAREKQSVE----- 416

Query: 1393 HSEAICQEDAFV-KNRSSDQAVGQTSSFCASTAMGRPDGEKXXXXXXXXXXXXXXXXXXX 1569
              + +  EDA   +NRS D+ +  +SSF ASTA+G  +  K                   
Sbjct: 417  -EDVMYVEDASTSQNRSPDRTLCPSSSFAASTALGISESVKAVEPVVASSSVCSGNSGGR 475

Query: 1570 XXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPATGRGSTSTKRSRAAEVHNLSER 1749
                +P+H  KRK  +               V  +K ATGR +T TKRSRAAEVHNLSER
Sbjct: 476  VS-KEPRHGLKRKVGEQEESGYQSEDVEGESVGTRKQATGRSAT-TKRSRAAEVHNLSER 533

Query: 1750 RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSXXXXXXXXXXXXX 1929
            RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS             
Sbjct: 534  RRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMASGMCMPPMMMT 593

Query: 1930 XXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPLVQVPPMHGPKFPC 2109
               QHM  PHM  FSP                            CPL+ +P + GP+ PC
Sbjct: 594  AGMQHMPPPHMTHFSP-MGVGMGMGMGIGMGMGMGMLDIGGSPGCPLIPLPSIRGPQIPC 652

Query: 2110 GTVSGPSSLPMMTGSSVQMFGLPGQGLPIPRPPFIHMPGAPSAKPTSSPIVSGSANVEEV 2289
             ++SGP  LP M GS++QM+     G+P+ R PF+   G P AK  + P +S   +    
Sbjct: 653  SSISGPMGLPGMPGSNLQMY-----GMPMARAPFLPFSGFPQAKAVAGPDISAPTSSGAF 707

Query: 2290 RDSALHSSSKDEMENL---NLKMSKTNSPFSEDQIATQCQVTKEGFEQSAMVQKIDQNKH 2460
             +    SSSKD+M+NL   N++   T+S     Q+    QV  E   Q  +V   +Q+  
Sbjct: 708  SELNPPSSSKDQMQNLISPNVQQKVTDS----QQLEASNQVISEHSAQPNLVPGHNQSSQ 763

Query: 2461 -DGSN 2472
              GSN
Sbjct: 764  VIGSN 768


>ref|XP_006605776.1| PREDICTED: transcription factor PIF3-like [Glycine max]
          Length = 722

 Score =  324 bits (831), Expect = 2e-85
 Identities = 255/731 (34%), Positives = 346/731 (47%), Gaps = 9/731 (1%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXXXX 447
            MP  +L++++ +   +  +   +  + DL   P+N+F ELVWENGQI  QGQ        
Sbjct: 1    MPLYELYRLARE---KLGKETTSTRAPDLCSSPENDFFELVWENGQISSQGQSSRVRRSP 57

Query: 448  XXXXXXGFMM-SHMSKSQEKDQGDAVTPKFDKFV-ADSVLNDFSSSGPSGHMGLGQEDDL 621
                     + SH  K ++KD G     +  KF   DS LN+   S PS  +    ++D+
Sbjct: 58   SCKSLPSHCLPSHCPKVRDKDVGYGTNTRMGKFGDLDSGLNEIPMSVPSREVDFCHDEDV 117

Query: 622  VRWLNYPLDDDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAHGGPN 801
            + WL+Y   D       E   D L+A  +    +  K+NG+      RDSH  S      
Sbjct: 118  LPWLDYTSMD--GSLQHEYGSDFLHASNS-FTLLDKKSNGNM---AFRDSHKTSE----- 166

Query: 802  PDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANNTSSA- 978
             +Q N  K S  A      R      QL      Q QTS  S RSR S+    NNTS+A 
Sbjct: 167  -EQGNVFKGSS-AEQVETARPKASTSQLFPPSLHQCQTSFVSSRSRASDITENNNTSNAN 224

Query: 979  QPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPTLKTN-H 1155
            Q   +   +  L+ +S L + K++K D     PP   + SS+  +NFSHF RP      +
Sbjct: 225  QDVSYGEITHILSSSSDLSSAKVQKCD-----PPITSNGSSSTIMNFSHFARPAAMVRAN 279

Query: 1156 LQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPLHMAG 1335
            LQ+     G  SS+  D +   +K +A  SSN  ES +++S+         Q Q +    
Sbjct: 280  LQNIGLKSGL-SSARSDSMEIKNKGAAATSSNPPESILVDSSGECSKEPTMQCQQVVEQS 338

Query: 1336 KLDAMPPVDKSSKEPTT-TRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPDGEK 1512
            K D      KS ++    ++ SE   +E A   +++ +Q +G + +       G+   EK
Sbjct: 339  KPDVNSLQPKSVEQNAVPSKQSEPASKESATKIDQTPNQVLGDSGT------KGQTAAEK 392

Query: 1513 XXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPATGR 1692
                                  ++P    KRK++DT                AKK A G+
Sbjct: 393  SMEPAVASSSVCSGTGADQGS-DEPNQNLKRKTKDTDDSECHSEDVEEESAGAKKTAGGQ 451

Query: 1693 GSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 1872
            G   +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL
Sbjct: 452  GGAGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 511

Query: 1873 QVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXXXXX 2052
            QVQIMS                QHMHAPHMAPFSP                         
Sbjct: 512  QVQIMSMGAGLYMPPMMLPAGMQHMHAPHMAPFSPMGVGMHMGYGMGYGMGMPDMNGGSS 571

Query: 2053 XXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPIPRPPFIHMP--- 2223
                P++QVP M G   P   +SGP++L  M  S+   +GLPGQG P+  PP    P   
Sbjct: 572  RF--PMIQVPQMQGTHIPVAHMSGPTALHGMARSNPPGYGLPGQGYPMHMPPASVFPFSG 629

Query: 2224 GAPSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK-TNSPFSEDQIATQCQ 2400
            G     P       GS+ + E  DSA  S  KD+M+N++ ++ + T    S  Q+ TQC+
Sbjct: 630  GPLMNSPAQGLHARGSSGLVETVDSASASGLKDQMQNVDPQVKQSTGGCDSTSQMPTQCE 689

Query: 2401 VTKEGFEQSAM 2433
                GFEQSA+
Sbjct: 690  AAAVGFEQSAL 700


>ref|XP_004495811.1| PREDICTED: transcription factor PIF3-like isoform X1 [Cicer
            arietinum]
          Length = 733

 Score =  313 bits (803), Expect = 3e-82
 Identities = 265/757 (35%), Positives = 357/757 (47%), Gaps = 22/757 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCS-ADLAFVPDNEFVELVWENGQILMQGQXXXXXXX 444
            MP  +L++++     E+   +  N S AD     +N+F ELVWE+GQI  QGQ       
Sbjct: 1    MPLYELYRLAR----ENLGNETNNTSVADQPSESENDFFELVWESGQISSQGQSSRVRKS 56

Query: 445  XXXXXXXGFMM-SHMSKSQEKD---QGDAVTPKFDKFV-ADSVLNDFSSSGPSGHMGLGQ 609
                      + SH  + ++KD    G    P+  KF   ++ LN+   S PS  + +GQ
Sbjct: 57   PSCRSFPSHCLPSHSPRGRDKDIGVGGYGNNPRTGKFGDLETGLNEIPMSVPSHVVDVGQ 116

Query: 610  EDDLVRWLNYPLDDDC-----SDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSH 774
            ++D++ WL+Y +D        S+F  EL     N LPA  N        S+   I R SH
Sbjct: 117  DEDMMPWLDYSMDGSFQNEYGSNFLHELPSVAGNNLPAASNNFTLLDKRSNGNQIFRKSH 176

Query: 775  MVSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFN 954
              SA      +  N  + S   P  T         QL    +P   TS  + RSR S+  
Sbjct: 177  KNSA------EPMNVSRGSSAEPVETARLNKASTSQL----YPP-STSFLTVRSRASDVA 225

Query: 955  GANNTSSA-QPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFL 1131
              NN S+A Q  P+   ++  + +S  P+ K++KQD      P  P NSS+  +NFSHF 
Sbjct: 226  ENNNASNANQDVPYGEITRITSSSSDFPSLKVQKQD------PKMPGNSSS-LMNFSHFA 278

Query: 1132 RPT-LKTNHLQSCRAAPGPPSSSG-VDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAG 1305
            RP  +   +LQ+     G  S+S   D +   +K +A  SSN  +ST++ S+        
Sbjct: 279  RPAAIVRANLQNISLKSGLVSASARSDSIAVKNKGAASTSSNPPDSTLVNSSGDCSKEPE 338

Query: 1306 YQGQPLHMAGKLDAMPPVDKSSK-EPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCAS 1482
             + Q +    K+D  P   KS + +   ++ SE  C+E     ++ S+Q +G        
Sbjct: 339  TRCQKVAEQPKVDLKPLQPKSLELKVVASKQSEPACKESGVKNDQPSNQVLGD------G 392

Query: 1483 TAMGRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXX 1662
             A G+   EK                      +DP    KRKSRDT              
Sbjct: 393  VAKGQTTVEKGVEVAVASSSVCSGNGADRGS-DDPNQNLKRKSRDTEDSECHSEDVEDES 451

Query: 1663 VAAKKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 1842
            V  KK A+GRG   +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE
Sbjct: 452  VVVKKGASGRGVIGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 511

Query: 1843 AIEYLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXX 2022
            AIEYLKTLQLQVQ+MS                QHMHAPHMA FSP               
Sbjct: 512  AIEYLKTLQLQVQMMSMGAGLYMPPMMLPAGMQHMHAPHMAAFSPLGVGMHMGLGMGYGM 571

Query: 2023 XXXXXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQG--LPI 2196
                          P++QVP M G   P   +SGPS++  M  S+ Q FGL GQG  +P+
Sbjct: 572  GIPDMNGGSSRF--PMIQVPQMQGAHIPVAHMSGPSAIHGMARSNPQGFGLQGQGISMPM 629

Query: 2197 PRPPFIHMPGAP----SAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSK-TN 2361
            PR P     G P    SA  TS+    GSA   E  + A  S SKD   N++ ++ + T+
Sbjct: 630  PRAPVFPFSGGPIMNSSATGTSA---YGSAGPVETVNPASASGSKDPTPNVDSQIKQSTS 686

Query: 2362 SPFSEDQIATQCQVTKEGFEQSAMVQKIDQNKHDGSN 2472
               +  QI  Q + T   F+Q A V       H+G N
Sbjct: 687  GRDTTSQIPNQREPTTAVFKQPASV-------HNGGN 716


>ref|XP_004495812.1| PREDICTED: transcription factor PIF3-like isoform X2 [Cicer
            arietinum]
          Length = 723

 Score =  308 bits (788), Expect = 1e-80
 Identities = 254/720 (35%), Positives = 342/720 (47%), Gaps = 21/720 (2%)
 Frame = +1

Query: 268  MPFSQLHQISSKGKLESAQPKQTNCS-ADLAFVPDNEFVELVWENGQILMQGQXXXXXXX 444
            MP  +L++++     E+   +  N S AD     +N+F ELVWE+GQI  QGQ       
Sbjct: 1    MPLYELYRLAR----ENLGNETNNTSVADQPSESENDFFELVWESGQISSQGQSSRVRKS 56

Query: 445  XXXXXXXGFMM-SHMSKSQEKD---QGDAVTPKFDKFV-ADSVLNDFSSSGPSGHMGLGQ 609
                      + SH  + ++KD    G    P+  KF   ++ LN+   S PS  + +GQ
Sbjct: 57   PSCRSFPSHCLPSHSPRGRDKDIGVGGYGNNPRTGKFGDLETGLNEIPMSVPSHVVDVGQ 116

Query: 610  EDDLVRWLNYPLDDDC-----SDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSH 774
            ++D++ WL+Y +D        S+F  EL     N LPA  N        S+   I R SH
Sbjct: 117  DEDMMPWLDYSMDGSFQNEYGSNFLHELPSVAGNNLPAASNNFTLLDKRSNGNQIFRKSH 176

Query: 775  MVSAHGGPNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFN 954
              SA      +  N  + S   P  T         QL    +P   TS  + RSR S+  
Sbjct: 177  KNSA------EPMNVSRGSSAEPVETARLNKASTSQL----YPP-STSFLTVRSRASDVA 225

Query: 955  GANNTSSA-QPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFL 1131
              NN S+A Q  P+   ++  + +S  P+ K++KQD      P  P NSS+  +NFSHF 
Sbjct: 226  ENNNASNANQDVPYGEITRITSSSSDFPSLKVQKQD------PKMPGNSSS-LMNFSHFA 278

Query: 1132 RPT-LKTNHLQSCRAAPGPPSSSG-VDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAG 1305
            RP  +   +LQ+     G  S+S   D +   +K +A  SSN  +ST++ S+        
Sbjct: 279  RPAAIVRANLQNISLKSGLVSASARSDSIAVKNKGAASTSSNPPDSTLVNSSGDCSKEPE 338

Query: 1306 YQGQPLHMAGKLDAMPPVDKSSK-EPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCAS 1482
             + Q +    K+D  P   KS + +   ++ SE  C+E     ++ S+Q +G        
Sbjct: 339  TRCQKVAEQPKVDLKPLQPKSLELKVVASKQSEPACKESGVKNDQPSNQVLGD------G 392

Query: 1483 TAMGRPDGEKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXX 1662
             A G+   EK                      +DP    KRKSRDT              
Sbjct: 393  VAKGQTTVEKGVEVAVASSSVCSGNGADRGS-DDPNQNLKRKSRDTEDSECHSEDVEDES 451

Query: 1663 VAAKKPATGRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 1842
            V  KK A+GRG   +KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE
Sbjct: 452  VVVKKGASGRGVIGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 511

Query: 1843 AIEYLKTLQLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXX 2022
            AIEYLKTLQLQVQ+MS                QHMHAPHMA FSP               
Sbjct: 512  AIEYLKTLQLQVQMMSMGAGLYMPPMMLPAGMQHMHAPHMAAFSPLGVGMHMGLGMGYGM 571

Query: 2023 XXXXXXXXXXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQG--LPI 2196
                          P++QVP M G   P   +SGPS++  M  S+ Q FGL GQG  +P+
Sbjct: 572  GIPDMNGGSSRF--PMIQVPQMQGAHIPVAHMSGPSAIHGMARSNPQGFGLQGQGISMPM 629

Query: 2197 PRPPFIHMPGAP----SAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSKTNS 2364
            PR P     G P    SA  TS+    GSA   E  + A  S SKD   N++ ++ ++ S
Sbjct: 630  PRAPVFPFSGGPIMNSSATGTSA---YGSAGPVETVNPASASGSKDPTPNVDSQIKQSTS 686


>ref|XP_006589101.1| PREDICTED: transcription factor PIF3-like [Glycine max]
          Length = 691

 Score =  298 bits (764), Expect = 9e-78
 Identities = 247/729 (33%), Positives = 322/729 (44%), Gaps = 7/729 (0%)
 Frame = +1

Query: 268  MPFSQLHQISSK--GKLESAQPKQTNCSADLAFVPDNEFVELVWENGQILMQGQXXXXXX 441
            MP  +L++++ +  GK  ++      CS+     P+N+F ELVWENGQI  QGQ      
Sbjct: 1    MPLYELYRLAREKLGKETTSTRAPDQCSS-----PENDFFELVWENGQISSQGQSSRVRR 55

Query: 442  XXXXXXXXGFMM-SHMSKSQEKDQGDAVTPKFDKFV-ADSVLNDFSSSGPSGHMGLGQED 615
                       + SH  K+++KD G     +  KF   DS LN+   S PS  +   Q++
Sbjct: 56   SPSCKSLPSHCLPSHSPKARDKDVGYGSYTRLGKFGDLDSGLNEIPMSVPSSEVDFCQDE 115

Query: 616  DLVRWLNYPLDDDCSDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAHGG 795
            D++ WL+YP  D       E   D L A  +    +  K+NG+      RDS   S    
Sbjct: 116  DVLPWLDYPSID--GSLQQEYGSDFLPASNS-FTLLDKKSNGNM---AFRDSQKTSE--- 166

Query: 796  PNPDQRNAVKFSGDAPNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANNTSS 975
               +Q N  K S      T         QL      Q QTS  S RSR S+    NNTS+
Sbjct: 167  ---EQGNVFKGSSAGQVETARPKASSTSQLFPPSLHQCQTSFVSSRSRASDITENNNTSN 223

Query: 976  A-QPAPFWNSSQNLNFTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPTLKTN 1152
            A Q A +   +  L+ +S   N K++K D     PP + + SS+  +NFSHF RP     
Sbjct: 224  ANQDASYGKITHILSSSSDFSNAKVQKCD-----PPMNSNGSSSTIMNFSHFARPAAMVR 278

Query: 1153 -HLQSCRAAPGPPSSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPLHM 1329
             +L S     G  SSS  D +   +K +A  SSN  ES +++S+         Q Q +  
Sbjct: 279  ANLHSIGLKSGL-SSSRSDSMEMKNKGAAATSSNPPESILVDSSVECLKEPIIQCQQVVE 337

Query: 1330 AGKLDAMPPVDKSSKEPTT-TRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPDG 1506
              K D    + KS ++    ++ SE   +E A   +   +Q  G   +       G+   
Sbjct: 338  QSKADVNSLLPKSVEQNAVPSKQSEPAGKESAAKIDLIPNQVPGDNGT------KGQTAA 391

Query: 1507 EKXXXXXXXXXXXXXXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPAT 1686
            EK                       +P    KRK +DT                AKK A 
Sbjct: 392  EKSKEPAVASSSVCSGNGTDQGS-EEPNQNLKRKRKDTDDSECHSEDVEEESAGAKKTAG 450

Query: 1687 GRGSTSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 1866
            GRG   +KRSRAAEVHNLSER+RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL
Sbjct: 451  GRGGAGSKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTL 510

Query: 1867 QLQVQIMSXXXXXXXXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXXX 2046
            QLQVQIMS                QHMHAPHMAPFSP                       
Sbjct: 511  QLQVQIMSMGAGLYMPPMMLPAGMQHMHAPHMAPFSPMGVGMHMGYGMGYGMGMPDMNGG 570

Query: 2047 XXXXXCPLVQVPPMHGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPIPRPPFIHMPG 2226
                  P++QVP M G   P   +SG ++   M  ++   FGLPGQG P+P P     P 
Sbjct: 571  SSRF--PMIQVPQMQGTHIPVAHMSGSTAFHGMARANPPGFGLPGQGHPMPMPRAPMFPF 628

Query: 2227 APSAKPTSSPIVSGSANVEEVRDSALHSSSKDEMENLNLKMSKTNSPFSEDQIATQCQVT 2406
            +    P   P V  S                            T    S  Q+ TQC+  
Sbjct: 629  SGGQMPNVDPQVKQS----------------------------TGGRDSTSQMPTQCEAA 660

Query: 2407 KEGFEQSAM 2433
              GFEQS +
Sbjct: 661  AVGFEQSTL 669


>gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
          Length = 589

 Score =  298 bits (764), Expect = 9e-78
 Identities = 228/617 (36%), Positives = 294/617 (47%), Gaps = 6/617 (0%)
 Frame = +1

Query: 658  SDFFSELSGDNLNALPAQVNAVPTKANGSSYAHILRDSHMVSAHGGPNPDQRNAVKFSGD 837
            SDF  ELSG  +N   +Q N         + +  + DSH VS H G N +Q + V  S  
Sbjct: 1    SDFLPELSGVTVNEHSSQSNFPSFDKRSCNQS--ITDSHTVSVHNGLNLEQGDVVMNSSA 58

Query: 838  APNSTKPRXXXXXXQLRSAPFPQFQTSIPSPRSRVSNFNGANNTSSAQPAPFWNSSQNLN 1017
                 K R      QL  +   Q +TS P  RSR S     + +++       +S +   
Sbjct: 59   GDIDAK-RPGTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAPT 117

Query: 1018 FTSGLPNTKMEKQDTAPTRPPSHPSNSSTGFLNFSHFLRPT-LKTNHLQSC--RAAPGPP 1188
               G P+ KM+KQ  AP+     P NSS   +NFSHF RP  L   +LQ+   RA+ G  
Sbjct: 118  SGGGFPSIKMQKQVPAPS-----PINSS--LMNFSHFARPAALVKANLQNVGMRASSG-- 168

Query: 1189 SSSGVDRLRSNDKVSAMGSSNVIESTVIESTSGSRSIAGYQGQPLHMAGKLDAMPPVDKS 1368
             +S ++R+++ DK    GS  + + T                +P  M+ K++  P   K 
Sbjct: 169  -TSSMERMQNKDK----GSIGLPKETDSHC------------RPNMMSSKVEVKPTEVKP 211

Query: 1369 SKEPTTTRHSEAICQEDAFVKNRSSDQAVGQTSSFCASTAMGRPDGEKXXXXXXXXXXXX 1548
            ++        E + QE     +R+  Q  G+      S   G  D EK            
Sbjct: 212  AEGSVPAELPEEMSQEGDSKSDRNCHQNFGE------SAIKGLEDVEKTTEPLVASSSVG 265

Query: 1549 XXXXXXXXXXNDPKHLSKRKSRDTXXXXXXXXXXXXXXVAAKKPATGRGSTSTKRSRAAE 1728
                      +DP    KRK RDT              V AKKPA+ R    +KR RAAE
Sbjct: 266  SGNSAERPS-DDPTENLKRKHRDTEESEGPSEDAEEESVGAKKPASARAGNGSKRGRAAE 324

Query: 1729 VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSXXXXXX 1908
            VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS      
Sbjct: 325  VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGMY 384

Query: 1909 XXXXXXXXXXQHMHAPHMAPFSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPLVQVPPM 2088
                       HMHA HM  F P                            CP+ QVPPM
Sbjct: 385  MPSMMLPPGMPHMHAAHMGQFLP------MGVGMGMGFRMGMPDMNGGYSGCPMYQVPPM 438

Query: 2089 HGPKFPCGTVSGPSSLPMMTGSSVQMFGLPGQGLPI--PRPPFIHMPGAPSAKPTSSPIV 2262
            HG  FP   +SGPS+L  M GSS+QMFGL GQGLP+  PR P + M G P  K    P  
Sbjct: 439  HGAHFPGSPMSGPSALHGMGGSSLQMFGLSGQGLPMSFPRAPLMPMSGGPPPKTNREPNA 498

Query: 2263 SGSANVEEVRDSALHSSSKDEMENLNLKMSKTN-SPFSEDQIATQCQVTKEGFEQSAMVQ 2439
             G     +  DSA  SSSKD ++N+N ++ + N +  S +Q ++QCQ T E FEQ A  Q
Sbjct: 499  CGVVGPMDNLDSATASSSKDAIQNINSQVMQNNVANRSMNQTSSQCQATNECFEQPAFAQ 558

Query: 2440 KIDQNKHDGSN*IMESS 2490
               +      + +++S+
Sbjct: 559  NNGEGSEVAESGVLKSA 575