BLASTX nr result
ID: Cocculus23_contig00003005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00003005
(237 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004498949.1| PREDICTED: ruBisCO large subunit-binding pro... 142 6e-32
ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding pro... 141 8e-32
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro... 141 8e-32
ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro... 141 1e-31
ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Caps... 140 2e-31
ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thali... 140 2e-31
ref|XP_006307049.1| hypothetical protein CARUB_v10008637mg [Caps... 140 2e-31
sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding... 140 2e-31
ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding pro... 140 2e-31
ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata] gi... 140 2e-31
dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana] 140 2e-31
ref|XP_007208310.1| hypothetical protein PRUPE_ppa003093mg [Prun... 139 3e-31
ref|XP_007024263.1| TCP-1/cpn60 chaperonin family protein [Theob... 139 4e-31
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit... 139 4e-31
gb|EXB55869.1| RuBisCO large subunit-binding protein subunit bet... 139 5e-31
ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidop... 139 5e-31
ref|XP_007014617.1| TCP-1/cpn60 chaperonin family protein [Theob... 139 5e-31
ref|XP_007149220.1| hypothetical protein PHAVU_005G051700g [Phas... 138 7e-31
ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutr... 138 7e-31
ref|XP_006838174.1| hypothetical protein AMTR_s00106p00119930 [A... 138 7e-31
>ref|XP_004498949.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Cicer arietinum]
Length = 592
Score = 142 bits (357), Expect = 6e-32
Identities = 71/78 (91%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKDTL NDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLSNDN RYGYNA
Sbjct: 470 SKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNTRYGYNA 529
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLM+AGIIDPTK
Sbjct: 530 ATGKYEDLMSAGIIDPTK 547
>ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Glycine max]
Length = 592
Score = 141 bits (356), Expect = 8e-32
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKD+LDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN RYGYNA
Sbjct: 470 SKVDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPRYGYNA 529
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLM+AGIIDPTK
Sbjct: 530 ATGKYEDLMSAGIIDPTK 547
>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297746501|emb|CBI16557.3| unnamed protein product
[Vitis vinifera]
Length = 608
Score = 141 bits (356), Expect = 8e-32
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKDTLDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN +YG+NA
Sbjct: 486 SKVDAIKDTLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGFNA 545
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 546 ATGKYEDLMAAGIIDPTK 563
>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297743227|emb|CBI36094.3| unnamed protein product
[Vitis vinifera]
Length = 609
Score = 141 bits (355), Expect = 1e-31
Identities = 69/78 (88%), Positives = 76/78 (97%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
+KVDAIKDTLD+DEQK+GADIVKRALSYP+KLIAKNAG NGSVV+EKVLS+DN +YGYNA
Sbjct: 487 AKVDAIKDTLDSDEQKVGADIVKRALSYPMKLIAKNAGVNGSVVIEKVLSSDNPKYGYNA 546
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 547 ATGKYEDLMAAGIIDPTK 564
>ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Capsella rubella]
gi|482565980|gb|EOA30169.1| hypothetical protein
CARUB_v10013285mg [Capsella rubella]
Length = 596
Score = 140 bits (353), Expect = 2e-31
Identities = 69/78 (88%), Positives = 75/78 (96%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKDTL+NDE+K+GA+IVKRALSYPLKLIAKNAG NGSVV EKVL+NDN +YGYNA
Sbjct: 474 SKVDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKYGYNA 533
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 534 ATGKYEDLMAAGIIDPTK 551
>ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thaliana]
gi|30695947|ref|NP_849811.1| chaperonin 60 subunit beta
1 [Arabidopsis thaliana]
gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
Full=Chaperonin 60 subunit beta 1, chloroplastic;
Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
subunit beta 1; AltName: Full=RuBisCO large
subunit-binding protein subunit beta, chloroplastic;
Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
Rubisco subunit binding-protein beta subunit
[Arabidopsis thaliana] gi|4204266|gb|AAD10647.1| Rubisco
subunit binding-protein beta subunit [Arabidopsis
thaliana] gi|20148345|gb|AAM10063.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
thaliana] gi|332195130|gb|AEE33251.1| chaperonin 60
subunit beta 1 [Arabidopsis thaliana]
gi|332195131|gb|AEE33252.1| chaperonin 60 subunit beta 1
[Arabidopsis thaliana]
Length = 600
Score = 140 bits (352), Expect = 2e-31
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIK TLDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLSNDN ++GYNA
Sbjct: 478 SKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNA 537
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 538 ATGKYEDLMAAGIIDPTK 555
>ref|XP_006307049.1| hypothetical protein CARUB_v10008637mg [Capsella rubella]
gi|482575760|gb|EOA39947.1| hypothetical protein
CARUB_v10008637mg [Capsella rubella]
Length = 600
Score = 140 bits (352), Expect = 2e-31
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIK TLDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLSNDN ++GYNA
Sbjct: 478 SKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNA 537
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 538 ATGKYEDLMAAGIIDPTK 555
>sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding protein subunit beta,
chloroplastic; AltName: Full=60 kDa chaperonin subunit
beta; AltName: Full=CPN-60 beta; Flags: Precursor
gi|806808|gb|AAA66365.1| chaperonin precursor [Pisum
sativum]
Length = 595
Score = 140 bits (352), Expect = 2e-31
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKDTL NDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN +YGYNA
Sbjct: 472 SKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNA 531
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 532 ATGKYEDLMAAGIIDPTK 549
>ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Glycine max]
Length = 591
Score = 140 bits (352), Expect = 2e-31
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVD IKD+LDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN RYGYNA
Sbjct: 469 SKVDTIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPRYGYNA 528
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLM+AGIIDPTK
Sbjct: 529 ATGKYEDLMSAGIIDPTK 546
>ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata]
gi|297340348|gb|EFH70765.1| CPN60B [Arabidopsis lyrata
subsp. lyrata]
Length = 600
Score = 140 bits (352), Expect = 2e-31
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIK TLDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLSNDN ++GYNA
Sbjct: 478 SKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNA 537
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 538 ATGKYEDLMAAGIIDPTK 555
>dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana]
Length = 234
Score = 140 bits (352), Expect = 2e-31
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIK TLDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLSNDN ++GYNA
Sbjct: 112 SKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNA 171
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 172 ATGKYEDLMAAGIIDPTK 189
>ref|XP_007208310.1| hypothetical protein PRUPE_ppa003093mg [Prunus persica]
gi|462403952|gb|EMJ09509.1| hypothetical protein
PRUPE_ppa003093mg [Prunus persica]
Length = 605
Score = 139 bits (351), Expect = 3e-31
Identities = 69/78 (88%), Positives = 73/78 (93%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKDTLDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN +YGYNA
Sbjct: 482 SKVDAIKDTLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNA 541
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATG YEDLMA GIIDPTK
Sbjct: 542 ATGNYEDLMAVGIIDPTK 559
>ref|XP_007024263.1| TCP-1/cpn60 chaperonin family protein [Theobroma cacao]
gi|508779629|gb|EOY26885.1| TCP-1/cpn60 chaperonin
family protein [Theobroma cacao]
Length = 608
Score = 139 bits (350), Expect = 4e-31
Identities = 67/78 (85%), Positives = 75/78 (96%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
+KVDA+++TLDNDEQK+GADIVKRALSYP+KLIAKNAG NGSVV+EKVLS+DN YGYNA
Sbjct: 486 AKVDAVRETLDNDEQKVGADIVKRALSYPMKLIAKNAGVNGSVVIEKVLSSDNPNYGYNA 545
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 546 ATGKYEDLMAAGIIDPTK 563
>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
[Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
subunit binding-protein beta subunit, rubb, putative
[Ricinus communis]
Length = 605
Score = 139 bits (350), Expect = 4e-31
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKD+LDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN R+GYNA
Sbjct: 483 SKVDAIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPRFGYNA 542
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATG YEDLMAAGIIDPTK
Sbjct: 543 ATGNYEDLMAAGIIDPTK 560
>gb|EXB55869.1| RuBisCO large subunit-binding protein subunit beta [Morus
notabilis]
Length = 769
Score = 139 bits (349), Expect = 5e-31
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVD I+DTL+NDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN +YGYNA
Sbjct: 481 SKVDGIRDTLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNA 540
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 541 ATGKYEDLMAAGIIDPTK 558
>ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
gi|75311214|sp|Q9LJE4.1|CPNB2_ARATH RecName:
Full=Chaperonin 60 subunit beta 2, chloroplastic;
Short=CPN-60 beta 2; Flags: Precursor
gi|9280299|dbj|BAB01754.1| GloEL protein; chaperonin, 60
kDa [Arabidopsis thaliana] gi|332641841|gb|AEE75362.1|
TCP-1/cpn60 chaperonin family protein [Arabidopsis
thaliana]
Length = 596
Score = 139 bits (349), Expect = 5e-31
Identities = 68/78 (87%), Positives = 75/78 (96%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIKDTL+NDE+K+GA+IVKRALSYPLKLIAKNAG NGSVV EKVL+NDN ++GYNA
Sbjct: 474 SKVDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNA 533
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 534 ATGKYEDLMAAGIIDPTK 551
>ref|XP_007014617.1| TCP-1/cpn60 chaperonin family protein [Theobroma cacao]
gi|508784980|gb|EOY32236.1| TCP-1/cpn60 chaperonin
family protein [Theobroma cacao]
Length = 607
Score = 139 bits (349), Expect = 5e-31
Identities = 68/78 (87%), Positives = 75/78 (96%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
S+VD+IKD+LDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN +YGYNA
Sbjct: 485 SEVDSIKDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNA 544
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 545 ATGKYEDLMAAGIIDPTK 562
>ref|XP_007149220.1| hypothetical protein PHAVU_005G051700g [Phaseolus vulgaris]
gi|561022484|gb|ESW21214.1| hypothetical protein
PHAVU_005G051700g [Phaseolus vulgaris]
Length = 593
Score = 138 bits (348), Expect = 7e-31
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAI+D+LDNDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN RYGYNA
Sbjct: 471 SKVDAIRDSLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNARYGYNA 530
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATG YEDLM+AGIIDPTK
Sbjct: 531 ATGNYEDLMSAGIIDPTK 548
>ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutrema salsugineum]
gi|557089212|gb|ESQ29920.1| hypothetical protein
EUTSA_v10011330mg [Eutrema salsugineum]
Length = 600
Score = 138 bits (348), Expect = 7e-31
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIK +L+NDE+K+GADIVKRALSYPLKLIAKNAG NGSVV EKVLSNDN +YGYNA
Sbjct: 478 SKVDAIKASLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKYGYNA 537
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATGKYEDLMAAGIIDPTK
Sbjct: 538 ATGKYEDLMAAGIIDPTK 555
>ref|XP_006838174.1| hypothetical protein AMTR_s00106p00119930 [Amborella trichopoda]
gi|548840632|gb|ERN00743.1| hypothetical protein
AMTR_s00106p00119930 [Amborella trichopoda]
Length = 613
Score = 138 bits (348), Expect = 7e-31
Identities = 70/78 (89%), Positives = 73/78 (93%)
Frame = +3
Query: 3 SKVDAIKDTLDNDEQKIGADIVKRALSYPLKLIAKNAGDNGSVVMEKVLSNDNQRYGYNA 182
SKVDAIK TL+NDEQKIGADIVKRALSYPLKLIAKNAG NGSVV EKVLS+DN +YGYNA
Sbjct: 491 SKVDAIKGTLENDEQKIGADIVKRALSYPLKLIAKNAGVNGSVVTEKVLSSDNPKYGYNA 550
Query: 183 ATGKYEDLMAAGIIDPTK 236
ATG YEDLMAAGIIDPTK
Sbjct: 551 ATGNYEDLMAAGIIDPTK 568