BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00002033
         (1230 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007050431.1| Zinc finger C-x8-C-x5-C-x3-H type family pro...   366   1e-98
ref|XP_004300085.1| PREDICTED: splicing factor U2af small subuni...   366   1e-98
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   366   1e-98
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   365   2e-98
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   364   5e-98
ref|XP_006849930.1| hypothetical protein AMTR_s00022p00118880 [A...   361   3e-97
ref|XP_006435479.1| hypothetical protein CICLE_v10003384mg [Citr...   360   5e-97
ref|XP_006403342.1| hypothetical protein EUTSA_v10003254mg [Eutr...   360   9e-97
ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit fami...   359   1e-96
ref|XP_002300614.1| hypothetical protein POPTR_0002s00480g [Popu...   359   1e-96
ref|XP_006495305.1| PREDICTED: splicing factor U2af small subuni...   358   2e-96
gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlise...   356   1e-95
ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arab...   353   1e-94
ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidops...   353   1e-94
gb|EYU36603.1| hypothetical protein MIMGU_mgv1a027010mg [Mimulus...   352   2e-94
gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notab...   352   2e-94
ref|XP_004969477.1| PREDICTED: splicing factor U2af small subuni...   352   2e-94
ref|XP_006415744.1| hypothetical protein EUTSA_v10008280mg [Eutr...   350   9e-94
ref|XP_006305464.1| hypothetical protein CARUB_v10009885mg [Caps...   350   9e-94
ref|NP_174086.1| splicing factor U2af small subunit A [Arabidops...   350   9e-94

>ref|XP_007050431.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1 [Theobroma
            cacao] gi|590716560|ref|XP_007050432.1| Zinc finger
            C-x8-C-x5-C-x3-H type family protein isoform 1 [Theobroma
            cacao] gi|508702692|gb|EOX94588.1| Zinc finger
            C-x8-C-x5-C-x3-H type family protein isoform 1 [Theobroma
            cacao] gi|508702693|gb|EOX94589.1| Zinc finger
            C-x8-C-x5-C-x3-H type family protein isoform 1 [Theobroma
            cacao]
          Length = 279

 Score =  366 bits (939), Expect = 1e-98
 Identities = 189/272 (69%), Positives = 194/272 (71%), Gaps = 3/272 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDP KIQEHFEDFYEDIFEELSKFGEIESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61   GVDAQGQPIDPHKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG+EL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKVIGREL 180

Query: 645  DRKLFGXXXXXXXXXXXXXXXXXXXXRDSERRPY---RDXXXXXXXXXXXXXXXXXXXXX 475
             RKLFG                    RD E R     RD                     
Sbjct: 181  RRKLFGRYRKFRGSRSRSRSASPRHRRDKEFRDRDRDRDRGDYRDRNGRRPDRHDRDSGS 240

Query: 474  XXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                           P REGSEERRARIEQWN
Sbjct: 241  RRKLGSPRRSRSPAPPAREGSEERRARIEQWN 272


>ref|XP_004300085.1| PREDICTED: splicing factor U2af small subunit B-like [Fragaria vesca
            subsp. vesca]
          Length = 280

 Score =  366 bits (939), Expect = 1e-98
 Identities = 186/273 (68%), Positives = 194/273 (71%), Gaps = 4/273 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVDPQGQP+DPRKIQ+HFEDFYEDIFEEL KFGEIESLN+CDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDPQGQPLDPRKIQDHFEDFYEDIFEELDKFGEIESLNVCDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFY+GRPII DFSPVTDFREATCRQFEENSCNRGGYCNFMHVK IG+EL
Sbjct: 121  QAAAALQALQGRFYNGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGREL 180

Query: 645  DRKLFGXXXXXXXXXXXXXXXXXXXXRDSERRPYRD----XXXXXXXXXXXXXXXXXXXX 478
             RKL+G                    R    R YR+                        
Sbjct: 181  RRKLYGRYRGFRASRSRSRSRSLSPPRHRRDRDYRERDYRGNGKRSKDRYDRDRDNGRRR 240

Query: 477  XXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                             VREGSEERRARIEQWN
Sbjct: 241  HGSPGRSRTRSRSPVAAVREGSEERRARIEQWN 273


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
            sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
            splicing factor U2af small subunit B-like [Cucumis
            sativus]
          Length = 276

 Score =  366 bits (939), Expect = 1e-98
 Identities = 186/271 (68%), Positives = 196/271 (72%), Gaps = 2/271 (0%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGK+L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDL 180

Query: 645  DRKLFGXXXXXXXXXXXXXXXXXXXXRDSER--RPYRDXXXXXXXXXXXXXXXXXXXXXX 472
             RKLFG                    ++ +R  R YRD                      
Sbjct: 181  RRKLFGRYRGYRASRSRSRSLSPRNRKEHDRRERDYRD--RDYRGNGRSKERHDRDGGRR 238

Query: 471  XXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                           VREGSEERRARIEQWN
Sbjct: 239  RQGSPRRSRSRSPVIVREGSEERRARIEQWN 269


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
            vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
            splicing factor U2af small subunit B isoform 2 [Vitis
            vinifera]
          Length = 272

 Score =  365 bits (937), Expect = 2e-98
 Identities = 188/269 (69%), Positives = 195/269 (72%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDPRKIQEHFEDFYEDIFEEL KFGEIESLN+CDNLADHM+GNVYVQFKEE+
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG++L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 645  DRKLFGXXXXXXXXXXXXXXXXXXXXRDSERRPYRDXXXXXXXXXXXXXXXXXXXXXXXX 466
             RKLFG                    RDS+RR   D                        
Sbjct: 181  RRKLFGRYSGYGRSRSRSRSLSPRYRRDSDRRRSGD----RGDYRGNGRRSGDKHGSDGG 236

Query: 465  XXXXXXXXXXXXPVREGSEERRARIEQWN 379
                        PVREGSEERRARIE WN
Sbjct: 237  RRRHGSPRRSRSPVREGSEERRARIELWN 265


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 272

 Score =  364 bits (934), Expect = 5e-98
 Identities = 188/274 (68%), Positives = 194/274 (70%), Gaps = 5/274 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDPRKIQEHFEDFYEDIFEEL KFGEIESLN+CDNLADHM+GNVYVQF+EED
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG++L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 645  DRKLFG-----XXXXXXXXXXXXXXXXXXXXRDSERRPYRDXXXXXXXXXXXXXXXXXXX 481
             RKLFG                          D   R YRD                   
Sbjct: 181  RRKLFGRYRGYRASRSRSRSVSPSRHRREKSNDRRERDYRD---------RDYRGNGRRS 231

Query: 480  XXXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                             PVREGSEERRARIEQWN
Sbjct: 232  GDRHDRRRHGSPRRSRSPVREGSEERRARIEQWN 265


>ref|XP_006849930.1| hypothetical protein AMTR_s00022p00118880 [Amborella trichopoda]
            gi|548853528|gb|ERN11511.1| hypothetical protein
            AMTR_s00022p00118880 [Amborella trichopoda]
          Length = 284

 Score =  361 bits (927), Expect = 3e-97
 Identities = 185/277 (66%), Positives = 199/277 (71%), Gaps = 8/277 (2%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMMTP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVDPQGQ ++P+KIQEHFEDFYEDI+EELSKFGEIESLN+CDNLADHMVGNVYVQFKEE+
Sbjct: 61   GVDPQGQAMEPQKIQEHFEDFYEDIYEELSKFGEIESLNVCDNLADHMVGNVYVQFKEEE 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     Q R+YSGRPII+DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVKQIG+EL
Sbjct: 121  QAAAALQAMQYRYYSGRPIIIDFSPVTDFREATCRQYEENNCNRGGYCNFMHVKQIGREL 180

Query: 645  DRKLFGXXXXXXXXXXXXXXXXXXXXRDSERRPYRD--------XXXXXXXXXXXXXXXX 490
             RKLFG                    R+SER+ Y D                        
Sbjct: 181  RRKLFGRNRRYRRSRSRSRSVSPGHRRESERKGYGDHGRRSYDRYDKHGSHDRHGSYDKY 240

Query: 489  XXXXXXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                                PVREGSEERRARIEQWN
Sbjct: 241  DRHGRHDRHGRHGSPKRTRSPVREGSEERRARIEQWN 277


>ref|XP_006435479.1| hypothetical protein CICLE_v10003384mg [Citrus clementina]
            gi|557537601|gb|ESR48719.1| hypothetical protein
            CICLE_v10003384mg [Citrus clementina]
          Length = 324

 Score =  360 bits (925), Expect = 5e-97
 Identities = 186/276 (67%), Positives = 197/276 (71%), Gaps = 5/276 (1%)
 Frame = -1

Query: 1191 LSMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 1012
            L+MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI
Sbjct: 57   LAMAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMI 116

Query: 1011 TPGVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKE 832
            TPGVD QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIE LN+CDNLADHM+GNVYVQF+E
Sbjct: 117  TPGVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFRE 176

Query: 831  EDXXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGK 652
            E+         QGRFYSGRPIIV+FSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG+
Sbjct: 177  EEQAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGR 236

Query: 651  ELDRKLFGXXXXXXXXXXXXXXXXXXXXRDSE-----RRPYRDXXXXXXXXXXXXXXXXX 487
            +L  KLFG                       +     RR YRD                 
Sbjct: 237  DLRNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRD---------------RD 281

Query: 486  XXXXXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                               PVREGSEERRA+IEQWN
Sbjct: 282  YERSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWN 317


>ref|XP_006403342.1| hypothetical protein EUTSA_v10003254mg [Eutrema salsugineum]
            gi|557104455|gb|ESQ44795.1| hypothetical protein
            EUTSA_v10003254mg [Eutrema salsugineum]
          Length = 282

 Score =  360 bits (923), Expect = 9e-97
 Identities = 182/275 (66%), Positives = 194/275 (70%), Gaps = 6/275 (2%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVDPQGQP+DP KIQ+HFEDFYEDIFEEL KFGE+ESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDPQGQPLDPSKIQDHFEDFYEDIFEELDKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EE++CNRGGYCNFMHVKQI +EL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEDNCNRGGYCNFMHVKQISREL 180

Query: 645  DRKLFG------XXXXXXXXXXXXXXXXXXXXRDSERRPYRDXXXXXXXXXXXXXXXXXX 484
             RKLFG                          R+ +R  +RD                  
Sbjct: 181  RRKLFGRYRRSYRRGSRSRSRSRSISPRRKRERERDRGDHRDRDRHGNGKRSSDRSERHD 240

Query: 483  XXXXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                               VREGSEERRARIEQWN
Sbjct: 241  RDGNGRRRHGSPKRSRSPVVREGSEERRARIEQWN 275


>ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit family protein [Populus
            trichocarpa] gi|222857274|gb|EEE94821.1| U2 snRNP
            auxiliary factor small subunit family protein [Populus
            trichocarpa]
          Length = 272

 Score =  359 bits (922), Expect = 1e-96
 Identities = 185/272 (68%), Positives = 192/272 (70%), Gaps = 3/272 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSN Y RPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNTYHRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQP+DP KIQEHFEDFYEDIFEELSKFGEIE+LN+CDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDAQGQPLDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IGK+L
Sbjct: 121  QAAAALQSLQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDL 180

Query: 645  DRKLFG---XXXXXXXXXXXXXXXXXXXXRDSERRPYRDXXXXXXXXXXXXXXXXXXXXX 475
             RKLFG                        D   R YRD                     
Sbjct: 181  RRKLFGRYRGYRVSRSRSRSVSPRRRDRDYDRRERDYRD-------RDRDYRGNGRRNDR 233

Query: 474  XXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                           PVREGSEERRARIEQWN
Sbjct: 234  DGGRKRHGSPRRSRSPVREGSEERRARIEQWN 265


>ref|XP_002300614.1| hypothetical protein POPTR_0002s00480g [Populus trichocarpa]
            gi|566155509|ref|XP_006386121.1| hypothetical protein
            POPTR_0002s00480g [Populus trichocarpa]
            gi|566155511|ref|XP_006386122.1| U2 snRNP auxiliary
            factor small subunit family protein [Populus trichocarpa]
            gi|222842340|gb|EEE79887.1| hypothetical protein
            POPTR_0002s00480g [Populus trichocarpa]
            gi|550343978|gb|ERP63918.1| hypothetical protein
            POPTR_0002s00480g [Populus trichocarpa]
            gi|550343979|gb|ERP63919.1| U2 snRNP auxiliary factor
            small subunit family protein [Populus trichocarpa]
          Length = 273

 Score =  359 bits (922), Expect = 1e-96
 Identities = 184/272 (67%), Positives = 192/272 (70%), Gaps = 3/272 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQP+DP KIQEHFE+FYEDIFEEL+KFGEIESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDAQGQPLDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG++L
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 645  DRKLFG---XXXXXXXXXXXXXXXXXXXXRDSERRPYRDXXXXXXXXXXXXXXXXXXXXX 475
             RKLFG                        D   R YRD                     
Sbjct: 181  RRKLFGRYRGYRVSRSRSRSVSPRKRERDYDRRERDYRD------RDRDRDRDYRGNGRR 234

Query: 474  XXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                            VREGSEERRARIEQWN
Sbjct: 235  NDKYDREGGRKRHGSTVREGSEERRARIEQWN 266


>ref|XP_006495305.1| PREDICTED: splicing factor U2af small subunit A-like [Citrus
            sinensis]
          Length = 266

 Score =  358 bits (920), Expect = 2e-96
 Identities = 185/274 (67%), Positives = 195/274 (71%), Gaps = 5/274 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDPRKIQEHFEDFYEDIFEELSKFGEIE LN+CDNLADHM+GNVYVQF+EE+
Sbjct: 61   GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIECLNVCDNLADHMIGNVYVQFREEE 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPIIV+FSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG++L
Sbjct: 121  QAAAALHALQGRFYSGRPIIVEFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 645  DRKLFGXXXXXXXXXXXXXXXXXXXXRDSE-----RRPYRDXXXXXXXXXXXXXXXXXXX 481
              KLFG                       +     RR YRD                   
Sbjct: 181  RNKLFGRYRRRSRSRSFSPIPHLRSRHRRDGDRDYRRSYRD---------------RDYE 225

Query: 480  XXXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                             PVREGSEERRA+IEQWN
Sbjct: 226  RSRRTHSRSSTSSRSRTPVREGSEERRAKIEQWN 259


>gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlisea aurea]
          Length = 278

 Score =  356 bits (913), Expect = 1e-95
 Identities = 185/274 (67%), Positives = 195/274 (71%), Gaps = 5/274 (1%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPI+ RKIQEHFEDF+EDIFEELSKFGEIESLN+CDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDAQGQPIEARKIQEHFEDFFEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     +GRFYSGRPII DFSPVTDFREATCRQ+EE+SCNRGGYCNFMHVK IG++L
Sbjct: 121  QAAAALNALRGRFYSGRPIIADFSPVTDFREATCRQYEEDSCNRGGYCNFMHVKMIGRDL 180

Query: 645  DRKLFG-----XXXXXXXXXXXXXXXXXXXXRDSERRPYRDXXXXXXXXXXXXXXXXXXX 481
             +KLFG                         RD ER   RD                   
Sbjct: 181  RKKLFGRRQIRFWGRRSRSRSASPPHFHRRERDKERDRERD---RDREVERREYRGGGGR 237

Query: 480  XXXXXXXXXXXXXXXXXPVREGSEERRARIEQWN 379
                             PVREGSEERRARIEQWN
Sbjct: 238  RQGERRRHGGSPRRSRSPVREGSEERRARIEQWN 271


>ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
            lyrata] gi|297309568|gb|EFH39992.1| hypothetical protein
            ARALYDRAFT_494737 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  353 bits (905), Expect = 1e-94
 Identities = 164/186 (88%), Positives = 172/186 (92%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVDPQGQP+DP KIQ+HFEDFYEDIFEEL+KFGE+ESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EENSCNRGGYCNFMHVKQI +EL
Sbjct: 121  HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186


>ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
            gi|42573547|ref|NP_974870.1| Splicing factor U2af small
            subunit B [Arabidopsis thaliana]
            gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName:
            Full=Splicing factor U2af small subunit B; AltName:
            Full=U2 auxiliary factor 35 kDa subunit B; AltName:
            Full=U2 small nuclear ribonucleoprotein auxiliary factor
            small subunit B; Short=U2 snRNP auxiliary factor small
            subunit B; AltName: Full=Zinc finger CCCH
            domain-containing protein 60; Short=AtC3H60
            gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor,
            small subunit [Arabidopsis thaliana]
            gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor
            small subunit [Arabidopsis thaliana]
            gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor
            small subunit [Arabidopsis thaliana]
            gi|332007485|gb|AED94868.1| Splicing factor U2af small
            subunit B [Arabidopsis thaliana]
            gi|332007486|gb|AED94869.1| Splicing factor U2af small
            subunit B [Arabidopsis thaliana]
          Length = 283

 Score =  353 bits (905), Expect = 1e-94
 Identities = 164/186 (88%), Positives = 172/186 (92%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVDPQGQP+DP KIQ+HFEDFYEDIFEEL+KFGE+ESLN+CDNLADHM+GNVYV FKEED
Sbjct: 61   GVDPQGQPLDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EENSCNRGGYCNFMHVKQI +EL
Sbjct: 121  HAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISREL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186


>gb|EYU36603.1| hypothetical protein MIMGU_mgv1a027010mg [Mimulus guttatus]
          Length = 304

 Score =  352 bits (903), Expect = 2e-94
 Identities = 166/186 (89%), Positives = 170/186 (91%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDP KIQEHFEDF+EDIFEEL KFGEIESLN+CDNLADHM+GNVY QFKEED
Sbjct: 61   GVDAQGQPIDPDKIQEHFEDFFEDIFEELRKFGEIESLNVCDNLADHMIGNVYAQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EENSCNRGGYCNFMHVK IGKEL
Sbjct: 121  EAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGKEL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186


>gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notabilis]
          Length = 348

 Score =  352 bits (902), Expect = 2e-94
 Identities = 165/186 (88%), Positives = 171/186 (91%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDP KIQEHFEDFYEDIFEEL KFGEIESLN+CDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDAQGQPIDPHKIQEHFEDFYEDIFEELCKFGEIESLNVCDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFY+GRPII DFSPVTDFREATCRQFEEN+CNRGGYCNFMHVK IG++L
Sbjct: 121  HAAAALQALQGRFYNGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186


>ref|XP_004969477.1| PREDICTED: splicing factor U2af small subunit B-like isoform X1
            [Setaria italica] gi|514779946|ref|XP_004969478.1|
            PREDICTED: splicing factor U2af small subunit B-like
            isoform X2 [Setaria italica]
            gi|514779950|ref|XP_004969479.1| PREDICTED: splicing
            factor U2af small subunit B-like isoform X3 [Setaria
            italica] gi|514779954|ref|XP_004969480.1| PREDICTED:
            splicing factor U2af small subunit B-like isoform X4
            [Setaria italica]
          Length = 293

 Score =  352 bits (902), Expect = 2e-94
 Identities = 162/186 (87%), Positives = 174/186 (93%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSR+HNRPTISPTL+L NMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRIHNRPTISPTLVLVNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQPIDPRK+QEHFEDFYEDIFEELSKFGEIE+LN+CDNLADHM+GNVYVQF+EED
Sbjct: 61   GVDAQGQPIDPRKMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPI+VDFSPVTDFREATCRQ+EENSCNRGGYCNFMHVKQIG++L
Sbjct: 121  QAAAAHTALQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGRDL 180

Query: 645  DRKLFG 628
             +KLFG
Sbjct: 181  RKKLFG 186


>ref|XP_006415744.1| hypothetical protein EUTSA_v10008280mg [Eutrema salsugineum]
            gi|557093515|gb|ESQ34097.1| hypothetical protein
            EUTSA_v10008280mg [Eutrema salsugineum]
          Length = 308

 Score =  350 bits (897), Expect = 9e-94
 Identities = 163/186 (87%), Positives = 171/186 (91%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQP+DPRKIQEHFEDF+ED+FEEL KFGEIESLNICDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK + +EL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186


>ref|XP_006305464.1| hypothetical protein CARUB_v10009885mg [Capsella rubella]
            gi|482574175|gb|EOA38362.1| hypothetical protein
            CARUB_v10009885mg [Capsella rubella]
          Length = 296

 Score =  350 bits (897), Expect = 9e-94
 Identities = 163/186 (87%), Positives = 171/186 (91%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQP+DPRKIQEHFEDF+ED+FEEL KFGEIESLNICDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK + +EL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186


>ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
            gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName:
            Full=Splicing factor U2af small subunit A; AltName:
            Full=U2 auxiliary factor 35 kDa subunit A; AltName:
            Full=U2 small nuclear ribonucleoprotein auxiliary factor
            small subunit A; Short=U2 snRNP auxiliary factor small
            subunit A; AltName: Full=Zinc finger CCCH
            domain-containing protein 8; Short=AtC3H8
            gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity to
            gb|Y18349 U2 snRNP auxiliary factor, small subunit from
            Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come from
            this gene [Arabidopsis thaliana]
            gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis
            thaliana] gi|12744991|gb|AAK06875.1|AF344324_1 putative
            U2 snRNP auxiliary factor [Arabidopsis thaliana]
            gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary
            factor [Arabidopsis thaliana] gi|19699275|gb|AAL91249.1|
            At1g27650/T22C5_2 [Arabidopsis thaliana]
            gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary
            factor protein [Arabidopsis thaliana]
            gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary
            factor [Arabidopsis thaliana] gi|21689611|gb|AAM67427.1|
            At1g27650/T22C5_2 [Arabidopsis thaliana]
            gi|332192737|gb|AEE30858.1| splicing factor U2af small
            subunit A [Arabidopsis thaliana]
          Length = 296

 Score =  350 bits (897), Expect = 9e-94
 Identities = 163/186 (87%), Positives = 171/186 (91%)
 Frame = -1

Query: 1185 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 1006
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 1005 GVDPQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNICDNLADHMVGNVYVQFKEED 826
            GVD QGQP+DPRKIQEHFEDF+ED+FEEL KFGEIESLNICDNLADHM+GNVYVQFKEED
Sbjct: 61   GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 825  XXXXXXXXXQGRFYSGRPIIVDFSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGKEL 646
                     QGRFYSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK + +EL
Sbjct: 121  QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 645  DRKLFG 628
             RKLFG
Sbjct: 181  RRKLFG 186