BLASTX nr result
ID: Cocculus23_contig00001989
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00001989
(336 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006466248.1| PREDICTED: mediator of RNA polymerase II tra... 110 3e-22
ref|XP_006466247.1| PREDICTED: mediator of RNA polymerase II tra... 110 3e-22
ref|XP_006426363.1| hypothetical protein CICLE_v100264431mg [Cit... 110 3e-22
ref|XP_002532875.1| conserved hypothetical protein [Ricinus comm... 109 3e-22
ref|XP_004487937.1| PREDICTED: mediator of RNA polymerase II tra... 109 5e-22
ref|XP_004487935.1| PREDICTED: mediator of RNA polymerase II tra... 109 5e-22
ref|XP_007225798.1| hypothetical protein PRUPE_ppa011256mg [Prun... 109 5e-22
ref|XP_007227497.1| hypothetical protein PRUPE_ppa011250mg [Prun... 108 6e-22
gb|EXC07341.1| hypothetical protein L484_021249 [Morus notabilis] 108 1e-21
gb|EYU44265.1| hypothetical protein MIMGU_mgv1a013558mg [Mimulus... 107 1e-21
ref|XP_007047903.1| Mediator of RNA polymerase II transcription ... 107 1e-21
ref|XP_006364546.1| PREDICTED: mediator of RNA polymerase II tra... 106 4e-21
ref|XP_007154753.1| hypothetical protein PHAVU_003G144800g [Phas... 105 7e-21
gb|EPS66924.1| hypothetical protein M569_07853, partial [Genlise... 105 7e-21
ref|XP_004240465.1| PREDICTED: mediator of RNA polymerase II tra... 105 9e-21
ref|XP_006596966.1| PREDICTED: uncharacterized protein LOC100500... 104 1e-20
ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycin... 104 1e-20
ref|XP_004300645.1| PREDICTED: mediator of RNA polymerase II tra... 104 1e-20
ref|XP_004160019.1| PREDICTED: mediator of RNA polymerase II tra... 104 1e-20
ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [S... 104 1e-20
>ref|XP_006466248.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X2 [Citrus sinensis]
Length = 217
Score = 110 bits (274), Expect = 3e-22
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++NY+EV SA+SSFCEYLAPLLHLSKPGVS GVVPT SL
Sbjct: 149 PVTPGIQLVEVTAPASSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_006466247.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X1 [Citrus sinensis]
Length = 234
Score = 110 bits (274), Expect = 3e-22
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++NY+EV SA+SSFCEYLAPLLHLSKPGVS GVVPT SL
Sbjct: 149 PVTPGIQLVEVTAPASSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_006426363.1| hypothetical protein CICLE_v100264431mg [Citrus clementina]
gi|557528353|gb|ESR39603.1| hypothetical protein
CICLE_v100264431mg [Citrus clementina]
Length = 217
Score = 110 bits (274), Expect = 3e-22
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++NY+EV SA+SSFCEYLAPLLHLSKPGVS GVVPT SL
Sbjct: 149 PVTPGIQLVEVTAPASSENYTEVASAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAVSL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_002532875.1| conserved hypothetical protein [Ricinus communis]
gi|223527360|gb|EEF29504.1| conserved hypothetical
protein [Ricinus communis]
Length = 217
Score = 109 bits (273), Expect = 3e-22
Identities = 55/69 (79%), Positives = 60/69 (86%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPA+ +NYSEVV+A+SSFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPATPENYSEVVAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_004487937.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X3 [Cicer arietinum]
gi|502085527|ref|XP_004487938.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 18-like isoform
X4 [Cicer arietinum]
Length = 217
Score = 109 bits (272), Expect = 5e-22
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQ+VEVTAPASA+NY+EV +A+SSFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 149 PVTPGIQMVEVTAPASAENYTEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_004487935.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like isoform X1 [Cicer arietinum]
gi|502085519|ref|XP_004487936.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 18-like isoform
X2 [Cicer arietinum]
Length = 224
Score = 109 bits (272), Expect = 5e-22
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQ+VEVTAPASA+NY+EV +A+SSFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 156 PVTPGIQMVEVTAPASAENYTEVAAAVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASL 215
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 216 MSDGGGTTL 224
>ref|XP_007225798.1| hypothetical protein PRUPE_ppa011256mg [Prunus persica]
gi|462422734|gb|EMJ26997.1| hypothetical protein
PRUPE_ppa011256mg [Prunus persica]
Length = 217
Score = 109 bits (272), Expect = 5e-22
Identities = 54/69 (78%), Positives = 61/69 (88%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPA+++NY+EVV+AISSFCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPATSENYTEVVAAISSFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_007227497.1| hypothetical protein PRUPE_ppa011250mg [Prunus persica]
gi|462424433|gb|EMJ28696.1| hypothetical protein
PRUPE_ppa011250mg [Prunus persica]
Length = 217
Score = 108 bits (271), Expect = 6e-22
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPA+++NY+EVV+A+SSFCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPATSENYTEVVAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>gb|EXC07341.1| hypothetical protein L484_021249 [Morus notabilis]
Length = 253
Score = 108 bits (269), Expect = 1e-21
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPA+++NYSEVV+A+SSFCE+LAPLLHLSKPG+S GVVPT ASL
Sbjct: 185 PVTPGIQLVEVTAPATSENYSEVVAAVSSFCEHLAPLLHLSKPGISTGVVPTAAAAAASL 244
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 245 MSDGGGTTL 253
>gb|EYU44265.1| hypothetical protein MIMGU_mgv1a013558mg [Mimulus guttatus]
Length = 217
Score = 107 bits (268), Expect = 1e-21
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++NY+EVV+A+SSFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPASSENYTEVVAAMSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG L
Sbjct: 209 MSDGGGTAL 217
>ref|XP_007047903.1| Mediator of RNA polymerase II transcription subunit 18 [Theobroma
cacao] gi|508700164|gb|EOX92060.1| Mediator of RNA
polymerase II transcription subunit 18 [Theobroma cacao]
Length = 217
Score = 107 bits (268), Expect = 1e-21
Identities = 53/69 (76%), Positives = 60/69 (86%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPA+++NY+EVV+A+SSFCEYLAPLLHLSKPG S GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPATSENYNEVVAAVSSFCEYLAPLLHLSKPGASTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>ref|XP_006364546.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Solanum tuberosum]
Length = 216
Score = 106 bits (264), Expect = 4e-21
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++NY+EVV+++SSFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPASSENYNEVVASVSSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASL 208
Query: 154 MSDRGG 137
MSD GG
Sbjct: 209 MSDGGG 214
>ref|XP_007154753.1| hypothetical protein PHAVU_003G144800g [Phaseolus vulgaris]
gi|593783427|ref|XP_007154754.1| hypothetical protein
PHAVU_003G144800g [Phaseolus vulgaris]
gi|561028107|gb|ESW26747.1| hypothetical protein
PHAVU_003G144800g [Phaseolus vulgaris]
gi|561028108|gb|ESW26748.1| hypothetical protein
PHAVU_003G144800g [Phaseolus vulgaris]
Length = 217
Score = 105 bits (262), Expect = 7e-21
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQ+VEVTAPA+A+ Y+EV +A+SSFCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 149 PVTPGIQMVEVTAPAAAETYTEVAAAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG TL
Sbjct: 209 MSDGGGTTL 217
>gb|EPS66924.1| hypothetical protein M569_07853, partial [Genlisea aurea]
Length = 218
Score = 105 bits (262), Expect = 7e-21
Identities = 53/69 (76%), Positives = 58/69 (84%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVT PAS++NYSE VSA+SSFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 150 PVTPGIQLVEVTVPASSENYSEAVSAMSSFCEYLAPLLHLSKPGVSTGVVPTAGAAVASL 209
Query: 154 MSDRGGKTL 128
MS+ G TL
Sbjct: 210 MSEAGSTTL 218
>ref|XP_004240465.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Solanum lycopersicum]
Length = 216
Score = 105 bits (261), Expect = 9e-21
Identities = 51/66 (77%), Positives = 59/66 (89%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++NY+EVV++++SFCEYLAPLLHLSKPGVS GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPASSENYNEVVASVTSFCEYLAPLLHLSKPGVSTGVVPTAAAAAASL 208
Query: 154 MSDRGG 137
MSD GG
Sbjct: 209 MSDGGG 214
>ref|XP_006596966.1| PREDICTED: uncharacterized protein LOC100500095 isoform X1 [Glycine
max]
Length = 242
Score = 104 bits (260), Expect = 1e-20
Identities = 51/69 (73%), Positives = 58/69 (84%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQ+VEVTAPA+A+ Y+EV SA+SSFCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 174 PVTPGIQMVEVTAPATAETYAEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 233
Query: 154 MSDRGGKTL 128
MSD GG L
Sbjct: 234 MSDGGGTNL 242
>ref|NP_001236730.1| uncharacterized protein LOC100500095 [Glycine max]
gi|571513879|ref|XP_006596967.1| PREDICTED:
uncharacterized protein LOC100500095 isoform X2 [Glycine
max] gi|571513883|ref|XP_006596968.1| PREDICTED:
uncharacterized protein LOC100500095 isoform X3 [Glycine
max] gi|571513887|ref|XP_006596969.1| PREDICTED:
uncharacterized protein LOC100500095 isoform X4 [Glycine
max] gi|571513891|ref|XP_006596970.1| PREDICTED:
uncharacterized protein LOC100500095 isoform X5 [Glycine
max] gi|255629097|gb|ACU14893.1| unknown [Glycine max]
Length = 217
Score = 104 bits (260), Expect = 1e-20
Identities = 51/69 (73%), Positives = 58/69 (84%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQ+VEVTAPA+A+ Y+EV SA+SSFCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 149 PVTPGIQMVEVTAPATAETYAEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
MSD GG L
Sbjct: 209 MSDGGGTNL 217
>ref|XP_004300645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Fragaria vesca subsp. vesca]
Length = 218
Score = 104 bits (259), Expect = 1e-20
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPAS++ Y+EV SA+SSFCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPASSETYTEVASAVSSFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 208
Query: 154 MSDRGG 137
MSD GG
Sbjct: 209 MSDGGG 214
>ref|XP_004160019.1| PREDICTED: mediator of RNA polymerase II transcription subunit
18-like [Cucumis sativus]
Length = 217
Score = 104 bits (259), Expect = 1e-20
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVEVTAPA++DNYSEV A+S+FCEYLAPLLHLSKPG+S GVVPT ASL
Sbjct: 149 PVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASL 208
Query: 154 MSDRGGKTL 128
+SD G T+
Sbjct: 209 LSDGAGTTM 217
>ref|XP_002451709.1| hypothetical protein SORBIDRAFT_04g006390 [Sorghum bicolor]
gi|241931540|gb|EES04685.1| hypothetical protein
SORBIDRAFT_04g006390 [Sorghum bicolor]
Length = 217
Score = 104 bits (259), Expect = 1e-20
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = -3
Query: 334 PLTPGIQLVEVTAPASADNYSEVVSAISSFCEYLAPLLHLSKPGVSAGVVPTXXXXXASL 155
P+TPGIQLVE+TAPA+ADNY++VVSA+S+FCEYLAPLLHLSKPG S G+V T ASL
Sbjct: 149 PVTPGIQLVEITAPAAADNYNDVVSAVSAFCEYLAPLLHLSKPGHSTGIVATAGAAAASL 208
Query: 154 MSDRGGKTL 128
MS GGKTL
Sbjct: 209 MSSGGGKTL 217