BLASTX nr result
ID: Cocculus23_contig00001896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00001896
(215 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADZ72836.1| GIGANTEA-like protein [Aquilegia formosa] 92 6e-17
ref|XP_002300901.2| GIGANTEA family protein [Populus trichocarpa... 87 2e-15
ref|XP_006386299.1| hypothetical protein POPTR_0002s06490g [Popu... 87 2e-15
ref|XP_007019604.1| Gigantea protein isoform 4 [Theobroma cacao]... 87 2e-15
ref|XP_007019603.1| Gigantea protein isoform 3 [Theobroma cacao]... 87 2e-15
ref|XP_007019601.1| Gigantea protein isoform 1 [Theobroma cacao]... 87 2e-15
ref|XP_006361617.1| PREDICTED: protein GIGANTEA-like isoform X2 ... 85 9e-15
ref|XP_006361616.1| PREDICTED: protein GIGANTEA-like isoform X1 ... 85 9e-15
dbj|BAK19067.1| GIGANTEA [Ipomoea nil] 85 9e-15
ref|XP_006842209.1| hypothetical protein AMTR_s00078p00173230 [A... 85 1e-14
gb|AGW52153.1| GI [Populus tomentosa] 84 2e-14
gb|AGM20686.1| GI1-2 [Populus tomentosa] 84 2e-14
dbj|BAD97864.1| GI homologue 1 [Lemna paucicostata] 84 2e-14
gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|... 84 3e-14
ref|XP_002307516.1| GIGANTEA family protein [Populus trichocarpa... 84 3e-14
ref|XP_004252566.1| PREDICTED: protein GIGANTEA-like [Solanum ly... 83 3e-14
gb|AEK05816.1| gigantea-5 [Populus balsamifera] gi|339777959|gb|... 83 4e-14
gb|AEK05807.1| gigantea 2 [Populus balsamifera] gi|339777945|gb|... 83 4e-14
gb|AEK05803.1| gigantea 2 [Populus balsamifera] 83 4e-14
gb|AEK05802.1| gigantea 2 [Populus balsamifera] 83 4e-14
>gb|ADZ72836.1| GIGANTEA-like protein [Aquilegia formosa]
Length = 750
Score = 92.4 bits (228), Expect = 6e-17
Identities = 49/68 (72%), Positives = 52/68 (76%)
Frame = +2
Query: 2 TDSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPD 181
TD LSNLLKCRLPAT+RCLSHPSAHVRALSTSVLRDIL +GPIK + KQE
Sbjct: 642 TDGLSNLLKCRLPATVRCLSHPSAHVRALSTSVLRDILFLGPIKFNVKQE---------K 692
Query: 182 RYLGVGGP 205
RY GV GP
Sbjct: 693 RYSGVQGP 700
>ref|XP_002300901.2| GIGANTEA family protein [Populus trichocarpa]
gi|550344413|gb|EEE80174.2| GIGANTEA family protein
[Populus trichocarpa]
Length = 1194
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSN+LKCRLPATIRCLSHPSAHVRALSTSVLRDIL G IK SSKQ H +
Sbjct: 1088 DGLSNILKCRLPATIRCLSHPSAHVRALSTSVLRDILQTGSIKPSSKQGDRNGIHGPSYQ 1147
Query: 185 YLGV 196
Y +
Sbjct: 1148 YFSL 1151
>ref|XP_006386299.1| hypothetical protein POPTR_0002s06490g [Populus trichocarpa]
gi|550344412|gb|ERP64096.1| hypothetical protein
POPTR_0002s06490g [Populus trichocarpa]
Length = 1171
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/64 (68%), Positives = 47/64 (73%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSN+LKCRLPATIRCLSHPSAHVRALSTSVLRDIL G IK SSKQ H +
Sbjct: 1065 DGLSNILKCRLPATIRCLSHPSAHVRALSTSVLRDILQTGSIKPSSKQGDRNGIHGPSYQ 1124
Query: 185 YLGV 196
Y +
Sbjct: 1125 YFSL 1128
>ref|XP_007019604.1| Gigantea protein isoform 4 [Theobroma cacao]
gi|508724932|gb|EOY16829.1| Gigantea protein isoform 4
[Theobroma cacao]
Length = 1147
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPAT RCLSHPSAHVRALSTSVLR+IL+ G IK +SKQ + H +
Sbjct: 1041 DGLSNLLKCRLPATTRCLSHPSAHVRALSTSVLRNILHAGSIKPNSKQVEINGIHGPSYQ 1100
Query: 185 YLGVG 199
Y VG
Sbjct: 1101 YFSVG 1105
>ref|XP_007019603.1| Gigantea protein isoform 3 [Theobroma cacao]
gi|508724931|gb|EOY16828.1| Gigantea protein isoform 3
[Theobroma cacao]
Length = 1171
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPAT RCLSHPSAHVRALSTSVLR+IL+ G IK +SKQ + H +
Sbjct: 1065 DGLSNLLKCRLPATTRCLSHPSAHVRALSTSVLRNILHAGSIKPNSKQVEINGIHGPSYQ 1124
Query: 185 YLGVG 199
Y VG
Sbjct: 1125 YFSVG 1129
>ref|XP_007019601.1| Gigantea protein isoform 1 [Theobroma cacao]
gi|590601196|ref|XP_007019602.1| Gigantea protein isoform
1 [Theobroma cacao] gi|508724929|gb|EOY16826.1| Gigantea
protein isoform 1 [Theobroma cacao]
gi|508724930|gb|EOY16827.1| Gigantea protein isoform 1
[Theobroma cacao]
Length = 1170
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/65 (67%), Positives = 49/65 (75%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPAT RCLSHPSAHVRALSTSVLR+IL+ G IK +SKQ + H +
Sbjct: 1064 DGLSNLLKCRLPATTRCLSHPSAHVRALSTSVLRNILHAGSIKPNSKQVEINGIHGPSYQ 1123
Query: 185 YLGVG 199
Y VG
Sbjct: 1124 YFSVG 1128
>ref|XP_006361617.1| PREDICTED: protein GIGANTEA-like isoform X2 [Solanum tuberosum]
Length = 1170
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQEC-MTSFHDSPD 181
D L+NLLKCRLPAT+RC+SHPSAHVRALSTSVLRDI+ G +K S+KQ + H+
Sbjct: 1063 DGLTNLLKCRLPATVRCVSHPSAHVRALSTSVLRDIMYAGSVKPSAKQAADVNGIHNPAY 1122
Query: 182 RYLGV 196
+YLG+
Sbjct: 1123 QYLGI 1127
>ref|XP_006361616.1| PREDICTED: protein GIGANTEA-like isoform X1 [Solanum tuberosum]
Length = 1171
Score = 85.1 bits (209), Expect = 9e-15
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQEC-MTSFHDSPD 181
D L+NLLKCRLPAT+RC+SHPSAHVRALSTSVLRDI+ G +K S+KQ + H+
Sbjct: 1064 DGLTNLLKCRLPATVRCVSHPSAHVRALSTSVLRDIMYAGSVKPSAKQAADVNGIHNPAY 1123
Query: 182 RYLGV 196
+YLG+
Sbjct: 1124 QYLGI 1128
>dbj|BAK19067.1| GIGANTEA [Ipomoea nil]
Length = 1166
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/68 (64%), Positives = 49/68 (72%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCR+PAT+RCLSHPSAHVRALS SVLR IL+ G IKS +K M H +
Sbjct: 1059 DGLSNLLKCRIPATVRCLSHPSAHVRALSISVLRAILHSGSIKSRAKPVNMNGIHGPAYQ 1118
Query: 185 YLGVGGPI 208
L VGG I
Sbjct: 1119 CLNVGGTI 1126
>ref|XP_006842209.1| hypothetical protein AMTR_s00078p00173230 [Amborella trichopoda]
gi|548844258|gb|ERN03884.1| hypothetical protein
AMTR_s00078p00173230 [Amborella trichopoda]
Length = 1143
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPATI CLSHPSAHVRALSTS+LRDILNIG KS+ +E + P R
Sbjct: 1037 DGLSNLLKCRLPATIHCLSHPSAHVRALSTSLLRDILNIGSPKSNFAEEDIRGIPVPPYR 1096
Query: 185 YLGVG 199
+ +G
Sbjct: 1097 NISIG 1101
>gb|AGW52153.1| GI [Populus tomentosa]
Length = 1241
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQ 148
D LSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIL G IK SSK+
Sbjct: 1135 DGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILRSGSIKPSSKR 1182
>gb|AGM20686.1| GI1-2 [Populus tomentosa]
Length = 1170
Score = 84.0 bits (206), Expect = 2e-14
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQ 148
D LSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIL G IK SSK+
Sbjct: 1064 DGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILRSGSIKPSSKR 1111
>dbj|BAD97864.1| GI homologue 1 [Lemna paucicostata]
Length = 1115
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/65 (66%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIK----SSSKQECMTSFHD 172
D LSNLLKCRLPATIRCLSHPSAHVRALST+VLRDILN P++ SS H
Sbjct: 1001 DGLSNLLKCRLPATIRCLSHPSAHVRALSTAVLRDILNGAPMRVKNSGSSSSGAAEEVHS 1060
Query: 173 SPDRY 187
SP +Y
Sbjct: 1061 SPQKY 1065
>gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|AEK05866.1|
gigantea-5 [Populus balsamifera]
gi|339778019|gb|AEK05871.1| gigantea-5 [Populus
balsamifera] gi|339778025|gb|AEK05876.1| gigantea-5
[Populus balsamifera]
Length = 173
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDI + G IK +SK H +
Sbjct: 67 DGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIQHTGSIKPASKLTHRNGIHGPSYQ 126
Query: 185 YL 190
YL
Sbjct: 127 YL 128
>ref|XP_002307516.1| GIGANTEA family protein [Populus trichocarpa]
gi|222856965|gb|EEE94512.1| GIGANTEA family protein
[Populus trichocarpa]
Length = 1171
Score = 83.6 bits (205), Expect = 3e-14
Identities = 43/62 (69%), Positives = 46/62 (74%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDI + G IK +SK H +
Sbjct: 1065 DGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIQHTGSIKPASKLTHRNGIHGPSYQ 1124
Query: 185 YL 190
YL
Sbjct: 1125 YL 1126
>ref|XP_004252566.1| PREDICTED: protein GIGANTEA-like [Solanum lycopersicum]
Length = 1167
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQEC-MTSFHDSPD 181
D L+NLLKCRLPAT+RC+SHPSAHVRALSTSVLRDI+ G +K S+KQ + + H+
Sbjct: 1060 DGLTNLLKCRLPATVRCVSHPSAHVRALSTSVLRDIMYAGSVKPSAKQAADVNAIHNPAY 1119
Query: 182 RYLGV 196
+YL +
Sbjct: 1120 QYLSI 1124
>gb|AEK05816.1| gigantea-5 [Populus balsamifera] gi|339777959|gb|AEK05821.1|
gigantea-5 [Populus balsamifera]
gi|339777965|gb|AEK05826.1| gigantea-5 [Populus
balsamifera] gi|339777971|gb|AEK05831.1| gigantea-5
[Populus balsamifera] gi|339777977|gb|AEK05836.1|
gigantea-5 [Populus balsamifera]
gi|339777983|gb|AEK05841.1| gigantea-5 [Populus
balsamifera] gi|339777989|gb|AEK05846.1| gigantea-5
[Populus balsamifera] gi|339777995|gb|AEK05851.1|
gigantea-5 [Populus balsamifera]
gi|339778001|gb|AEK05856.1| gigantea-5 [Populus
balsamifera]
Length = 173
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/61 (68%), Positives = 45/61 (73%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDI + G IK +SK H +
Sbjct: 67 DGLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDIQHTGSIKPASKLTXRNGIHGPSYQ 126
Query: 185 Y 187
Y
Sbjct: 127 Y 127
>gb|AEK05807.1| gigantea 2 [Populus balsamifera] gi|339777945|gb|AEK05810.1| gigantea
2 [Populus balsamifera] gi|339777947|gb|AEK05811.1|
gigantea 2 [Populus balsamifera]
Length = 1113
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/61 (68%), Positives = 45/61 (73%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSN+LKCRLPATIRCLSHPSAHVRALS SVLRDIL G I+ SSKQ H +
Sbjct: 1017 DGLSNILKCRLPATIRCLSHPSAHVRALSISVLRDILQTGSIQPSSKQGDRNGIHGPSYQ 1076
Query: 185 Y 187
Y
Sbjct: 1077 Y 1077
>gb|AEK05803.1| gigantea 2 [Populus balsamifera]
Length = 1113
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/61 (68%), Positives = 45/61 (73%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSN+LKCRLPATIRCLSHPSAHVRALS SVLRDIL G I+ SSKQ H +
Sbjct: 1017 DGLSNILKCRLPATIRCLSHPSAHVRALSISVLRDILQTGSIQPSSKQGDRNGIHGPSYQ 1076
Query: 185 Y 187
Y
Sbjct: 1077 Y 1077
>gb|AEK05802.1| gigantea 2 [Populus balsamifera]
Length = 1113
Score = 82.8 bits (203), Expect = 4e-14
Identities = 42/61 (68%), Positives = 45/61 (73%)
Frame = +2
Query: 5 DSLSNLLKCRLPATIRCLSHPSAHVRALSTSVLRDILNIGPIKSSSKQECMTSFHDSPDR 184
D LSN+LKCRLPATIRCLSHPSAHVRALS SVLRDIL G I+ SSKQ H +
Sbjct: 1017 DGLSNILKCRLPATIRCLSHPSAHVRALSISVLRDILQTGSIQPSSKQGDRNGIHGPSYQ 1076
Query: 185 Y 187
Y
Sbjct: 1077 Y 1077