BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00001225
         (2784 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   934   0.0  
gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus nota...   911   0.0  
ref|XP_006382239.1| hypothetical protein POPTR_0005s00240g [Popu...   909   0.0  
ref|XP_007208352.1| hypothetical protein PRUPE_ppa001778mg [Prun...   908   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   908   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   908   0.0  
ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   908   0.0  
ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citr...   902   0.0  
ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citr...   902   0.0  
ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Popu...   901   0.0  
ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Popu...   901   0.0  
ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   895   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   895   0.0  
ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   894   0.0  
ref|XP_007031306.1| DEAD box RNA helicase isoform 1 [Theobroma c...   888   0.0  
ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   887   0.0  
ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   887   0.0  
ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   882   0.0  
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]   877   0.0  
ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   875   0.0  

>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  934 bits (2415), Expect = 0.0
 Identities = 512/737 (69%), Positives = 549/737 (74%), Gaps = 25/737 (3%)
 Frame = +1

Query: 340  LSLLPGDKSHFGD-KFP---------LRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGF 489
            LSL   DK+H G  K P         LR S  Q   FV  AIATPNSVLSEEAFKGLGGF
Sbjct: 28   LSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQGISFVPSAIATPNSVLSEEAFKGLGGF 87

Query: 490  SKXXXXXXXXXXXXXXXX-----------SISNLGLPQQLVESLEKRGITHLFPIQRAVL 636
            SK                           +++ LGLP +LVESLE+RGITHLFPIQRAVL
Sbjct: 88   SKDPLDVTDTDDDYDPEIEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFPIQRAVL 147

Query: 637  LPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELA 816
            +PALEG+D+IARAKTGTGKTLAFGIPIIKRL+ DDE               VLAPTRELA
Sbjct: 148  VPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELA 207

Query: 817  RQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEV 996
            +QVEKEIKESAPYL+TVCVYGGVSYI QQNALSRGVDVVVGTPGR            GEV
Sbjct: 208  KQVEKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEV 267

Query: 997  QYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDL 1176
            Q LVLDEADQMLAVGFEEDVEVILE LP +RQSMLFSATMP WVKKLARKYLDNPLTIDL
Sbjct: 268  QNLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDL 327

Query: 1177 VGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTN 1356
            VGD DEKLAEGIKLYAIPTTA+SKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSMALTN
Sbjct: 328  VGDHDEKLAEGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTN 387

Query: 1357 SIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPET 1536
            SIASEALHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDL+IHYELPNDPET
Sbjct: 388  SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 447

Query: 1537 FVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVV 1716
            FVHRSGRTGRAGKEG+AILMFTSSQRRTV+SLERDVGC+FEFISPPAIE+VLESSA+QVV
Sbjct: 448  FVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVV 507

Query: 1717 STLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQ 1896
            +TL GVHPESVEFF PTAQKLIEEKGT           GFS+PPS RSLISHEQGW TLQ
Sbjct: 508  ATLNGVHPESVEFFTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQ 567

Query: 1897 MTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLN 2076
            +TRDS YSRG+LSARSVTGFLSDVYP AADE+GKIYL+ADE+VQGAVFDLPE+IAKELLN
Sbjct: 568  LTRDSGYSRGFLSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLN 627

Query: 2077 KQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDS 2256
            KQ+PPGNTI KITKLPALQDD P  D                              +  S
Sbjct: 628  KQMPPGNTISKITKLPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGS 687

Query: 2257 DFEDG---FQXXXXXXXXXXXXXXXXXARGDDWLI-XXXXXXXXXXXXXXXXGFGGACFN 2424
            D + G    +                    DDWLI                  FGG+CF 
Sbjct: 688  DDDGGDDLNRRGGRSFRSNNNWSRNLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFT 747

Query: 2425 CGRSGHRASDCPDKQDY 2475
            CGRSGHRAS+CP+K+DY
Sbjct: 748  CGRSGHRASECPNKRDY 764


>gb|EXB57576.1| DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis]
          Length = 810

 Score =  911 bits (2355), Expect = 0.0
 Identities = 502/750 (66%), Positives = 541/750 (72%), Gaps = 39/750 (5%)
 Frame = +1

Query: 334  SPLSLLPGDKSHFGDKFPLRSSRP-QRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXX 510
            SP SL   DKSHF       + +    S  V+ AIATPNSVLSEEAFKGLG FSK     
Sbjct: 28   SPSSLPFPDKSHFNSVLRAYNCKSGSSSRLVASAIATPNSVLSEEAFKGLGDFSKDSFSG 87

Query: 511  XXXXXXXXXXX------------SISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEG 654
                                   +IS LGLPQ+LV+SLEKRGITHLFPIQRAVL+PALEG
Sbjct: 88   DEEDDYESEEGEPGEASVDDDELAISKLGLPQRLVDSLEKRGITHLFPIQRAVLVPALEG 147

Query: 655  QDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKE 834
            +D+IARAKTGTGKTLAFGIPIIKRLT DDE               VLAPTRELA+QVEKE
Sbjct: 148  RDLIARAKTGTGKTLAFGIPIIKRLTEDDEQRGSRRRSSRLPKGLVLAPTRELAKQVEKE 207

Query: 835  IKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLD 1014
            IKESAP+LNTVCVYGGVSYI QQNALSRGVDVVVGTPGR            GEVQYLVLD
Sbjct: 208  IKESAPHLNTVCVYGGVSYITQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVQYLVLD 267

Query: 1015 EADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDE 1194
            EADQMLAVGFEEDVEVILE LP +RQSMLFSATMP WVKKLARKYLDNPLTIDLVG++DE
Sbjct: 268  EADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGERDE 327

Query: 1195 KLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEA 1374
            KLAEGIKLYAI TTA+SKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEA
Sbjct: 328  KLAEGIKLYAISTTATSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEA 387

Query: 1375 LHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSG 1554
            LHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSG
Sbjct: 388  LHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSG 447

Query: 1555 RTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGV 1734
            RTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP+IE+VLESSA+ VV+TL GV
Sbjct: 448  RTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPSIEEVLESSAEHVVATLSGV 507

Query: 1735 HPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSD 1914
            H ESVEFF PTAQKLIEE+GT           GF+RPPSSRSLI+HEQG  TLQ+ RD  
Sbjct: 508  HAESVEFFTPTAQKLIEEQGTSALAAALAQLSGFARPPSSRSLINHEQGLVTLQLIRDPA 567

Query: 1915 YSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPG 2094
            +SRG+LSARSVTGFLSDVY AAADE+GK+YL+ADE+VQ AVFDLPE+IAKELLN+++P G
Sbjct: 568  FSRGFLSARSVTGFLSDVYSAAADELGKVYLVADERVQSAVFDLPEEIAKELLNRELPSG 627

Query: 2095 NTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGF 2274
            NTI KITKLP LQDD P SD                               R   F D  
Sbjct: 628  NTISKITKLPPLQDDGPASDYYGRFSSREHGGDRGSRRGSRGRGGFRGSRGRGGGFSDDE 687

Query: 2275 QXXXXXXXXXXXXXXXXXARG-----DDWLIXXXXXXXXXXXXXXXXG------------ 2403
                              +RG     DDWLI                G            
Sbjct: 688  DDVFRSSGRSSRKPNNSWSRGSRSSSDDWLIGGRKSTPRSSSDDWLIGGRKSGSSWSQGS 747

Query: 2404 ---------FGGACFNCGRSGHRASDCPDK 2466
                     FGG+CFNCGRSGHRAS+CPDK
Sbjct: 748  SRSSSRDRSFGGSCFNCGRSGHRASECPDK 777


>ref|XP_006382239.1| hypothetical protein POPTR_0005s00240g [Populus trichocarpa]
            gi|550337590|gb|ERP60036.1| hypothetical protein
            POPTR_0005s00240g [Populus trichocarpa]
          Length = 775

 Score =  909 bits (2349), Expect = 0.0
 Identities = 487/720 (67%), Positives = 536/720 (74%), Gaps = 15/720 (2%)
 Frame = +1

Query: 361  KSHFGDKFPLRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXX 540
            K+    K  L  +    S     AIA+PNS+LSEEAFKGL GFS                
Sbjct: 59   KTQLSFKHSLIINNSSSSFSPPSAIASPNSILSEEAFKGLDGFSDFEADVDAGGADVDYA 118

Query: 541  XS--------------ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAK 678
             S              +S LGLP +LV++L+ RGITHLFPIQRAVL+PALEG+D+IARAK
Sbjct: 119  SSETEPSSNTSEDELDVSKLGLPHRLVQTLQNRGITHLFPIQRAVLIPALEGRDLIARAK 178

Query: 679  TGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYL 858
            TGTGKTLAFGIPIIKRLT D E               VLAPTRELA+QVEKEIKESAPYL
Sbjct: 179  TGTGKTLAFGIPIIKRLTEDAELRGSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYL 238

Query: 859  NTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAV 1038
            ++VCVYGGVSY+ QQ+ALSRGVDVVVGTPGR            GEV+YLVLDEADQML+ 
Sbjct: 239  SSVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSF 298

Query: 1039 GFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKL 1218
            GFEEDVEVILE LP KRQSMLFSATMP WVKKLARKYLDNPL IDLVGDQ+EKLAEGIKL
Sbjct: 299  GFEEDVEVILENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKL 358

Query: 1219 YAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQH 1398
            YA+  TA+SKRTILSDLVTVYAKGGKTI+FTQTKRDADEVSMALTN+IASEALHGDISQH
Sbjct: 359  YALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDADEVSMALTNTIASEALHGDISQH 418

Query: 1399 HRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 1578
             RERTLN FR GKFTVLVATDVA+RGLDIPNVDL+IHYELPND ETFVHRSGRTGRAGKE
Sbjct: 419  QRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTGRAGKE 478

Query: 1579 GSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFF 1758
            G+AILMFTSSQRRTVRSLERD GC+FEF+SPPAIE+VLESSA+QVV+TL GVHPESVEFF
Sbjct: 479  GTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPESVEFF 538

Query: 1759 IPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSA 1938
             PTAQKLIEE+GT           GFS+PPSSRSLISH QGW TLQ+TRD  YSRG+LSA
Sbjct: 539  TPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSRGFLSA 598

Query: 1939 RSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITK 2118
            RSVTGFLSDVYPAAADEVGKI++IADE+VQGAVFDLPE+IAKELLNKQIPPGNTI KITK
Sbjct: 599  RSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTIAKITK 658

Query: 2119 LPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-RDSDFEDGFQXXXXXX 2295
            LPALQDD PP D                              + RDSD    ++      
Sbjct: 659  LPALQDDGPPGDFYGRFSSRDRPARGGPRGQRGGFRSSRGRGSGRDSDDGGTYRRGGRSN 718

Query: 2296 XXXXXXXXXXXARGDDWLIXXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPDKQDY 2475
                       + GDDWLI                 FGG+CFNCGRSGHRAS+CP+K+D+
Sbjct: 719  SNENSWSQMSRSSGDDWLIGGRRSSRPPSRDR---SFGGSCFNCGRSGHRASECPNKKDF 775


>ref|XP_007208352.1| hypothetical protein PRUPE_ppa001778mg [Prunus persica]
            gi|462403994|gb|EMJ09551.1| hypothetical protein
            PRUPE_ppa001778mg [Prunus persica]
          Length = 766

 Score =  908 bits (2347), Expect = 0.0
 Identities = 490/731 (67%), Positives = 541/731 (74%), Gaps = 19/731 (2%)
 Frame = +1

Query: 340  LSLLPGDKSHFGDKFPLRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXX 519
            LSL   ++ HF      +S   ++S  V+ AIATPNSVLSEEAFKGLGGFSK        
Sbjct: 39   LSLAFPERPHFNSVLRAKSGLVRQSSLVASAIATPNSVLSEEAFKGLGGFSKDSLDSDSE 98

Query: 520  XXXXXXXXS---------ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIAR 672
                    S         +S LGLPQ+LV+SLEKRGI+ LFPIQRAVL+PALEG+DIIAR
Sbjct: 99   YDSETEPASAAGDDDELALSKLGLPQRLVDSLEKRGISSLFPIQRAVLVPALEGRDIIAR 158

Query: 673  AKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIKESAP 852
            AKTGTGKTLAFGIPI+KRLT DDE               VLAPTRELA+QVEKEIKESAP
Sbjct: 159  AKTGTGKTLAFGIPILKRLTEDDEQRSSHRRTGYLPRVLVLAPTRELAKQVEKEIKESAP 218

Query: 853  YLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQML 1032
            YLNTVCVYGGVSYI QQ+ALSRGVDVVVGTPGR            GEVQYLVLDEAD ML
Sbjct: 219  YLNTVCVYGGVSYITQQSALSRGVDVVVGTPGRIIDLINGNSLKLGEVQYLVLDEADSML 278

Query: 1033 AVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGI 1212
            AVGFEEDVEVIL+ LP +RQSMLFSATMP WVKKLARKYLDNPLTIDLVGDQ+EKLAEGI
Sbjct: 279  AVGFEEDVEVILQKLPTQRQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDQEEKLAEGI 338

Query: 1213 KLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDIS 1392
            KLYA+ TT SSKRTILSDL+TVYAKGGKTIVFTQTKRDADEVSM+LT SIASEALHGDIS
Sbjct: 339  KLYALSTTGSSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDIS 398

Query: 1393 QHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAG 1572
            QH RERTLN FR GKFTVLVATDVA+RGLDIPNVDLVIHYELPND ETFVHRSGRTGRAG
Sbjct: 399  QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDSETFVHRSGRTGRAG 458

Query: 1573 KEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVE 1752
            K+G+A+LMFT++QRRTVR+LERDVGC+FEF+SPP IE+VLESSAQ VV+TL GVHPESV+
Sbjct: 459  KQGTAVLMFTNNQRRTVRTLERDVGCKFEFVSPPTIEEVLESSAQHVVATLSGVHPESVQ 518

Query: 1753 FFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYL 1932
            FF PTAQKLI+E+GT           GFSRPPSSRSLI+HEQGWTTLQ+ RD  ++RG+L
Sbjct: 519  FFTPTAQKLIDEQGTNALAAALAQLSGFSRPPSSRSLITHEQGWTTLQIIRDPAFARGFL 578

Query: 1933 SARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKI 2112
            SARSVTGFLSDVY AAADEVGKI++IADE+VQGAVFDLPE+IAKELLN+QIPPGNTI KI
Sbjct: 579  SARSVTGFLSDVYSAAADEVGKIHIIADERVQGAVFDLPEEIAKELLNRQIPPGNTISKI 638

Query: 2113 TKLPALQDDRPPSD----------NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDF 2262
             KLPALQDD P +D          N                             +  S  
Sbjct: 639  NKLPALQDDGPVNDYYGRFSGRDRNSRRGGSRDRQGSSGFRSSRGWGSSDGADDSFRSGG 698

Query: 2263 EDGFQXXXXXXXXXXXXXXXXXARGDDWLIXXXXXXXXXXXXXXXXGFGGACFNCGRSGH 2442
              G +                 +  DDWLI                 FGG+CFNCGRSGH
Sbjct: 699  RGGGRGGGRSFGNSNSQSRTSRSTDDDWLI---GGRPSSRSSSRDRSFGGSCFNCGRSGH 755

Query: 2443 RASDCPDKQDY 2475
            RAS+CP KQ Y
Sbjct: 756  RASECPTKQGY 766


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  908 bits (2346), Expect = 0.0
 Identities = 500/747 (66%), Positives = 543/747 (72%), Gaps = 30/747 (4%)
 Frame = +1

Query: 313  PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 447
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 448  SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX---------SISNLGLPQQLVESLEKRG 600
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 601  ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 780
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 781  XXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 960
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 961  XXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1140
                     GEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1141 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1320
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1321 RDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1500
            RDADEVS+ALT+ IASEALHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1501 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1680
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1681 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRS 1860
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT           GFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1861 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 2040
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 2041 DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXX 2220
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 2221 XXXXXXXXNR---DSDFEDGF---QXXXXXXXXXXXXXXXXXARGDDWLIXXXXXXXXXX 2382
                    +     SD EDGF   +                 +  DDWLI          
Sbjct: 683  GARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDWLI---GGSRSSR 739

Query: 2383 XXXXXXGFGGACFNCGRSGHRASDCPD 2463
                   FGGACFNCGRSGHRAS+CP+
Sbjct: 740  SSSRDRSFGGACFNCGRSGHRASECPN 766


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  908 bits (2346), Expect = 0.0
 Identities = 500/747 (66%), Positives = 543/747 (72%), Gaps = 30/747 (4%)
 Frame = +1

Query: 313  PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 447
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 448  SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX---------SISNLGLPQQLVESLEKRG 600
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 601  ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 780
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 781  XXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 960
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 961  XXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1140
                     GEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1141 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1320
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1321 RDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1500
            RDADEVS+ALT+ IASEALHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1501 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1680
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1681 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRS 1860
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT           GFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1861 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 2040
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 2041 DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXX 2220
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 2221 XXXXXXXXNR---DSDFEDGF---QXXXXXXXXXXXXXXXXXARGDDWLIXXXXXXXXXX 2382
                    +     SD EDGF   +                 +  DDWLI          
Sbjct: 683  GARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDWLI--GGSRSSRS 740

Query: 2383 XXXXXXGFGGACFNCGRSGHRASDCPD 2463
                   FGGACFNCGRSGHRAS+CP+
Sbjct: 741  SSRDSRSFGGACFNCGRSGHRASECPN 767


>ref|XP_006480315.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 768

 Score =  908 bits (2346), Expect = 0.0
 Identities = 500/747 (66%), Positives = 543/747 (72%), Gaps = 30/747 (4%)
 Frame = +1

Query: 313  PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 447
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 448  SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX---------SISNLGLPQQLVESLEKRG 600
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 601  ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 780
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 781  XXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 960
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 961  XXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1140
                     GEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1141 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1320
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1321 RDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1500
            RDADEVS+ALT+ IASEALHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1501 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1680
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1681 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRS 1860
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT           GFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1861 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 2040
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 2041 DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXX 2220
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 2221 XXXXXXXXNR---DSDFEDGF---QXXXXXXXXXXXXXXXXXARGDDWLIXXXXXXXXXX 2382
                    +     SD EDGF   +                 +  DDWLI          
Sbjct: 683  GARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDWLI-GGSRSSRSS 741

Query: 2383 XXXXXXGFGGACFNCGRSGHRASDCPD 2463
                   FGGACFNCGRSGHRAS+CP+
Sbjct: 742  SRDSSRSFGGACFNCGRSGHRASECPN 768


>ref|XP_006423936.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|557525870|gb|ESR37176.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 780

 Score =  902 bits (2332), Expect = 0.0
 Identities = 500/759 (65%), Positives = 543/759 (71%), Gaps = 42/759 (5%)
 Frame = +1

Query: 313  PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 447
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 448  SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX---------SISNLGLPQQLVESLEKRG 600
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 601  ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 780
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 781  XXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 960
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 961  XXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1140
                     GEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1141 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1320
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1321 RDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1500
            RDADEVS+ALT+ IASEALHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1501 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1680
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1681 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRS 1860
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT           GFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1861 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 2040
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 2041 DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDN---------------XXXXXX 2175
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 2176 XXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGF---QXXXXXXXXXXXXXXXXXARGDDW 2346
                                   +  SD EDGF   +                 +  DDW
Sbjct: 683  GARGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDW 742

Query: 2347 LIXXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPD 2463
            LI                 FGGACFNCGRSGHRAS+CP+
Sbjct: 743  LI-GGSRSSRSSSRDSSRSFGGACFNCGRSGHRASECPN 780


>ref|XP_006423935.1| hypothetical protein CICLE_v10027858mg [Citrus clementina]
            gi|567862566|ref|XP_006423937.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525869|gb|ESR37175.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
            gi|557525871|gb|ESR37177.1| hypothetical protein
            CICLE_v10027858mg [Citrus clementina]
          Length = 779

 Score =  902 bits (2332), Expect = 0.0
 Identities = 500/759 (65%), Positives = 543/759 (71%), Gaps = 42/759 (5%)
 Frame = +1

Query: 313  PPGRKYRSPLSLLPGDKSHFGDKFPLRS-SRP--------------QRSVFVSHAIATPN 447
            PP     + LSL   DKSHF       S ++P              Q   FV  AIATPN
Sbjct: 24   PPATTSSALLSLPLADKSHFNALIATSSVAKPLGFRNGGGSGFGFKQSLTFVPSAIATPN 83

Query: 448  SVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX---------SISNLGLPQQLVESLEKRG 600
            +VLSEEAFK LG FS+                         +IS LGLP +L ESLEKRG
Sbjct: 84   TVLSEEAFKRLGEFSENSGSLDGSVSDEDYESQTVSDEDELAISKLGLPGRLAESLEKRG 143

Query: 601  ITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXX 780
            ITHLFPIQRAV  PAL+G+D+IARAKTGTGKTLAFGIPI+KRLT   E            
Sbjct: 144  ITHLFPIQRAVFEPALQGRDLIARAKTGTGKTLAFGIPILKRLTEGYEQAISLRRSRLPK 203

Query: 781  XXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXX 960
               VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSY  QQNALSRGVDVVVGTPGR   
Sbjct: 204  VL-VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYNTQQNALSRGVDVVVGTPGRIID 262

Query: 961  XXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLA 1140
                     GEV+YLVLDEADQMLAVGFEEDVE+ILE LPPKRQSMLFSATMP WVKKL+
Sbjct: 263  LINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELILENLPPKRQSMLFSATMPSWVKKLS 322

Query: 1141 RKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTK 1320
            RKYLDNPL IDLVG+QDEKLAEGIKLYAI TTA+SKRTILSDL+TVYAKGGKTIVFTQTK
Sbjct: 323  RKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATSKRTILSDLITVYAKGGKTIVFTQTK 382

Query: 1321 RDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDL 1500
            RDADEVS+ALT+ IASEALHGDISQH RERTLN FR GKFTVLVATDVAARGLDIPNVDL
Sbjct: 383  RDADEVSLALTSIIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDL 442

Query: 1501 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAI 1680
            +IHYELPNDPETFVHRSGRTGRAGKEG+AILMFTSSQRRTVRSLERDVGC+FEF+SPP +
Sbjct: 443  IIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDVGCKFEFVSPPVV 502

Query: 1681 EDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRS 1860
            EDVLESSA+QVV+TL GVHPESVEFF PTAQ+LIEEKGT           GFSRPPSSRS
Sbjct: 503  EDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIEEKGTDALAAALAQLSGFSRPPSSRS 562

Query: 1861 LISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVF 2040
            LI+HEQGW TLQ+TRDS +SRG++SARSV GFLSDVYP AADE+GKI++IAD++VQGAVF
Sbjct: 563  LINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSDVYPTAADEIGKIHIIADDRVQGAVF 622

Query: 2041 DLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDN---------------XXXXXX 2175
            DLPE+IAKELLNKQIPPGNTI KITKLP LQDD P SDN                     
Sbjct: 623  DLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGPSSDNYGRFSSGDRFSRGGGSRFSRG 682

Query: 2176 XXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGF---QXXXXXXXXXXXXXXXXXARGDDW 2346
                                   +  SD EDGF   +                 +  DDW
Sbjct: 683  GARGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNNQGSRFSTSSDDDW 742

Query: 2347 LIXXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPD 2463
            LI                 FGGACFNCGRSGHRAS+CP+
Sbjct: 743  LI--GGSRSSRSSSRDSRSFGGACFNCGRSGHRASECPN 779


>ref|XP_006382234.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337585|gb|ERP60031.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 774

 Score =  901 bits (2329), Expect = 0.0
 Identities = 482/692 (69%), Positives = 524/692 (75%), Gaps = 14/692 (2%)
 Frame = +1

Query: 430  AIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXXS-------------ISNLGLPQ 570
            AIATPN +LSEEAFKGL GFS                               IS LGLPQ
Sbjct: 85   AIATPNPILSEEAFKGLDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQ 144

Query: 571  QLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXX 750
            +LV++L+ RGITHLFPIQRAVL+P LEG+D+IARAKTGTGKTLAFGIPIIKRLT D E  
Sbjct: 145  RLVQTLQNRGITHLFPIQRAVLIPTLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDAELR 204

Query: 751  XXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDV 930
                         VLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY  QQNALSRGVDV
Sbjct: 205  GSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYATQQNALSRGVDV 264

Query: 931  VVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSA 1110
            VVGTPGR            GEV+YLVLDEADQML+ GFEEDVEVILE+LP KRQSMLFSA
Sbjct: 265  VVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVILESLPSKRQSMLFSA 324

Query: 1111 TMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKG 1290
            TMP WVKKLARKYLDNPL IDLVGD++EKLAEGIKLYAI TTA+SKRTILSDLVTVYAKG
Sbjct: 325  TMPTWVKKLARKYLDNPLQIDLVGDREEKLAEGIKLYAISTTATSKRTILSDLVTVYAKG 384

Query: 1291 GKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAA 1470
             KTI+FT+TKRDADEVSMALT SIASEALHGDISQH RERTLN FR GKFTVLVATDVA+
Sbjct: 385  EKTIIFTRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 444

Query: 1471 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGC 1650
            RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVRSLERD GC
Sbjct: 445  RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGC 504

Query: 1651 QFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXX 1830
            +FEF+SPPAIE++LESS +QVV+TL GVHPESVEFF PTAQKLIEE+GT           
Sbjct: 505  KFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFFTPTAQKLIEEQGTSALAAALAHLS 564

Query: 1831 GFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLI 2010
            GFSRPPSSRSLISHEQGWTTLQ+TRD  YSRG+LSARSVTGFLSDVYPAAADE+GKI+LI
Sbjct: 565  GFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSARSVTGFLSDVYPAAADEIGKIHLI 624

Query: 2011 ADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD-NXXXXXXXXXX 2187
            ADE+VQGAVFDLPE+IAKELLNKQ+PPGNTI KITKLPALQDD PPSD            
Sbjct: 625  ADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITKLPALQDDGPPSDFYGRFSSRDRPA 684

Query: 2188 XXXXXXXXXXXXXXXXXXXNRDSDFEDGFQXXXXXXXXXXXXXXXXXARGDDWLIXXXXX 2367
                                R SD E   +                 + GDDWL+     
Sbjct: 685  RGGPRGQRGGFRSSRGQGSGRYSDDEGTNRRGGRSNSNENTRSWMSRSSGDDWLV--GGR 742

Query: 2368 XXXXXXXXXXXGFGGACFNCGRSGHRASDCPD 2463
                        FGG+CFNCGRSGHRAS+CP+
Sbjct: 743  RSSRPSSRDSRSFGGSCFNCGRSGHRASECPN 774


>ref|XP_006382233.1| hypothetical protein POPTR_0005s00200g [Populus trichocarpa]
            gi|550337584|gb|ERP60030.1| hypothetical protein
            POPTR_0005s00200g [Populus trichocarpa]
          Length = 773

 Score =  901 bits (2329), Expect = 0.0
 Identities = 482/692 (69%), Positives = 524/692 (75%), Gaps = 14/692 (2%)
 Frame = +1

Query: 430  AIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXXS-------------ISNLGLPQ 570
            AIATPN +LSEEAFKGL GFS                               IS LGLPQ
Sbjct: 85   AIATPNPILSEEAFKGLDGFSDFEADADTDDAVDYDSSETEPNSNTSEDELDISKLGLPQ 144

Query: 571  QLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXX 750
            +LV++L+ RGITHLFPIQRAVL+P LEG+D+IARAKTGTGKTLAFGIPIIKRLT D E  
Sbjct: 145  RLVQTLQNRGITHLFPIQRAVLIPTLEGRDLIARAKTGTGKTLAFGIPIIKRLTEDAELR 204

Query: 751  XXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDV 930
                         VLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY  QQNALSRGVDV
Sbjct: 205  GSQRRTGRLPKVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYATQQNALSRGVDV 264

Query: 931  VVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSA 1110
            VVGTPGR            GEV+YLVLDEADQML+ GFEEDVEVILE+LP KRQSMLFSA
Sbjct: 265  VVGTPGRIIDLLKGNSLKLGEVEYLVLDEADQMLSFGFEEDVEVILESLPSKRQSMLFSA 324

Query: 1111 TMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKG 1290
            TMP WVKKLARKYLDNPL IDLVGD++EKLAEGIKLYAI TTA+SKRTILSDLVTVYAKG
Sbjct: 325  TMPTWVKKLARKYLDNPLQIDLVGDREEKLAEGIKLYAISTTATSKRTILSDLVTVYAKG 384

Query: 1291 GKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAA 1470
             KTI+FT+TKRDADEVSMALT SIASEALHGDISQH RERTLN FR GKFTVLVATDVA+
Sbjct: 385  EKTIIFTRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 444

Query: 1471 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGC 1650
            RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVRSLERD GC
Sbjct: 445  RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGC 504

Query: 1651 QFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXX 1830
            +FEF+SPPAIE++LESS +QVV+TL GVHPESVEFF PTAQKLIEE+GT           
Sbjct: 505  KFEFVSPPAIEELLESSTEQVVATLNGVHPESVEFFTPTAQKLIEEQGTSALAAALAHLS 564

Query: 1831 GFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLI 2010
            GFSRPPSSRSLISHEQGWTTLQ+TRD  YSRG+LSARSVTGFLSDVYPAAADE+GKI+LI
Sbjct: 565  GFSRPPSSRSLISHEQGWTTLQLTRDPTYSRGFLSARSVTGFLSDVYPAAADEIGKIHLI 624

Query: 2011 ADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD-NXXXXXXXXXX 2187
            ADE+VQGAVFDLPE+IAKELLNKQ+PPGNTI KITKLPALQDD PPSD            
Sbjct: 625  ADERVQGAVFDLPEEIAKELLNKQLPPGNTIEKITKLPALQDDGPPSDFYGRFSSRDRPA 684

Query: 2188 XXXXXXXXXXXXXXXXXXXNRDSDFEDGFQXXXXXXXXXXXXXXXXXARGDDWLIXXXXX 2367
                                R SD E   +                 + GDDWL+     
Sbjct: 685  RGGPRGQRGGFRSSRGQGSGRYSDDEGTNRRGGRSNSNENTRSWMSRSSGDDWLV---GG 741

Query: 2368 XXXXXXXXXXXGFGGACFNCGRSGHRASDCPD 2463
                        FGG+CFNCGRSGHRAS+CP+
Sbjct: 742  RRSSRPSSRDRSFGGSCFNCGRSGHRASECPN 773


>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  895 bits (2314), Expect = 0.0
 Identities = 478/694 (68%), Positives = 525/694 (75%), Gaps = 12/694 (1%)
 Frame = +1

Query: 430  AIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX----------SISNLGLPQQLV 579
            AIATPNSVLSEEAFKGLGG SK                          +I NLGL ++LV
Sbjct: 80   AIATPNSVLSEEAFKGLGGLSKGRGFKDDGEDDYELEVGSEASNEENLAIGNLGLREELV 139

Query: 580  ESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXX 759
            ++L KRGITHLFPIQRAVL+PALEG+DII RAKTGTGKTLAF IPIIKRL  DDE     
Sbjct: 140  DALAKRGITHLFPIQRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKRL--DDEGRSPS 197

Query: 760  XXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVG 939
                      VLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY  QQNAL+RGVDVVVG
Sbjct: 198  RGRLPRVL--VLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNIQQNALTRGVDVVVG 255

Query: 940  TPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMP 1119
            TPGR            GEVQYLVLDEADQMLAVGFEEDVEVILE LP  RQSMLFSATMP
Sbjct: 256  TPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPTGRQSMLFSATMP 315

Query: 1120 GWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKT 1299
            GWVKKLARKYLDNP+TIDLVGDQ+EKLAEGIKLYAIPTTA++KRTIL DL+TVYAKGGKT
Sbjct: 316  GWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATTKRTILGDLITVYAKGGKT 375

Query: 1300 IVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGL 1479
            IVFTQTKRDADEVS+ALT+SI SEALHGDISQH RERTLN FR GKFTVLVATDVAARGL
Sbjct: 376  IVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGL 435

Query: 1480 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFE 1659
            DIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG+AILMFT SQRRT++SLERDVGC FE
Sbjct: 436  DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTGSQRRTIKSLERDVGCSFE 495

Query: 1660 FISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFS 1839
            FISPP +E+VLESSA+QVV+TLKGVHPES++FF+P AQ++IEE+GT           GFS
Sbjct: 496  FISPPQMEEVLESSAEQVVATLKGVHPESIQFFLPAAQRMIEEQGTDALAAALAHLSGFS 555

Query: 1840 RPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADE 2019
            +PPSSRSL++HEQGW TLQ+TR+  +SRG+LSARSVTGFLSD+YPAAADEVGKI+LIADE
Sbjct: 556  QPPSSRSLVTHEQGWVTLQLTREQGFSRGFLSARSVTGFLSDIYPAAADEVGKIHLIADE 615

Query: 2020 KVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXX 2199
            +VQGAVFDLPE+IAKELL KQ PPGNTI KITKLP LQDD P  DN              
Sbjct: 616  RVQGAVFDLPEEIAKELLTKQTPPGNTISKITKLPPLQDDGPSGDNYGRFPSRDRGGRGG 675

Query: 2200 XXXXXXXXXXXXXXXNRDSDFEDGFQXXXXXXXXXXXXXXXXXARGDD--WLIXXXXXXX 2373
                           + DSD ED F+                    DD  WLI       
Sbjct: 676  LRDRGGFRGSRNWGRS-DSDDEDQFRRGGRNFRGGSSQSRNSWRSNDDDDWLIGNRRSNR 734

Query: 2374 XXXXXXXXXGFGGACFNCGRSGHRASDCPDKQDY 2475
                      FGGACF CGR+GHRA+DCP KQD+
Sbjct: 735  SSSFGSRDRSFGGACFVCGRAGHRAADCPSKQDF 768


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  895 bits (2314), Expect = 0.0
 Identities = 486/721 (67%), Positives = 530/721 (73%), Gaps = 33/721 (4%)
 Frame = +1

Query: 412  SVFVSHAIATPNSVLSEEAFKGLGG---------------FSKXXXXXXXXXXXXXXXXS 546
            S FV+ AIA PNS+LSEEAFKGLGG                                  +
Sbjct: 62   SSFVTSAIAAPNSILSEEAFKGLGGRLSDFDEDEDNDDVSSGGYEDDGAGESLPDDDELA 121

Query: 547  ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKR 726
            IS LGLPQ+LVESLEKRGITHLFPIQRAVL+PALEG+D+IARAKTGTGKTLAFGIPIIK 
Sbjct: 122  ISKLGLPQRLVESLEKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKC 181

Query: 727  LTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQN 906
            +T DD+               VLAPTRELA+QVEKEI ESAPYL+TVCVYGGVSYI Q+N
Sbjct: 182  ITEDDKSSQRRTGRLPRVL--VLAPTRELAKQVEKEINESAPYLSTVCVYGGVSYITQRN 239

Query: 907  ALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPK 1086
            ALSRGVDVVVGTPGR            GEV+YLVLDEADQML+ GFEEDVEVILE LP K
Sbjct: 240  ALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVILENLPSK 299

Query: 1087 RQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSD 1266
            RQSMLFSATMP WVKKLARKYLDNPL IDLVGDQ+EKLAEGIKLYAI T A+SKR+ILSD
Sbjct: 300  RQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATSKRSILSD 359

Query: 1267 LVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTV 1446
            LVTVYAKGGKTI+FTQTKRDADEVSM LTNSIASEALHGDISQH RERTLN FR GKFTV
Sbjct: 360  LVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGFRQGKFTV 419

Query: 1447 LVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVR 1626
            LVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+A+LMFTSSQRRTV+
Sbjct: 420  LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRRTVK 479

Query: 1627 SLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXX 1806
            SLERDVGC+FEF+SPP  E+VLESSA+QV++TL GVHPESV FF PTAQ+LIEE+GT   
Sbjct: 480  SLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIEEQGTSAL 539

Query: 1807 XXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAAD 1986
                    GFS+PPSSRSLISHEQGWTTLQ+TRD  YSRG+LSARSVTGFLSDVY AAAD
Sbjct: 540  AAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSDVYTAAAD 599

Query: 1987 EVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD---N 2157
            EVGKI++IADEKVQGAVFDLPE+IAKELLNKQ+PPGNTI KITKLP+LQDD PPSD    
Sbjct: 600  EVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKITKLPSLQDDGPPSDFYGR 659

Query: 2158 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGFQXXXXXXXXXXXXXXXXXARG 2337
                                          R+SD +D                    +  
Sbjct: 660  FSSRDRPPRGGGRGQRGSRSSQGWGGGRGGRNSDDDD--------DTFRRGGRSFSRSSS 711

Query: 2338 DDWLI---------------XXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPDKQD 2472
            DDWLI                                FGG+CFNCGRSGHRASDCP+K D
Sbjct: 712  DDWLIGGGRSSRPSPRGRSSPRDWSSPRDRSSPRDRSFGGSCFNCGRSGHRASDCPNKLD 771

Query: 2473 Y 2475
            +
Sbjct: 772  F 772


>ref|XP_004135577.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Cucumis sativus]
          Length = 748

 Score =  894 bits (2310), Expect = 0.0
 Identities = 475/700 (67%), Positives = 525/700 (75%), Gaps = 9/700 (1%)
 Frame = +1

Query: 394  SSRPQRSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXXS--------- 546
            SSR   S F S AIATPNS+LSEEAF+   GFS+                +         
Sbjct: 54   SSRRNLSGFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELA 113

Query: 547  ISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKR 726
            IS L LPQ+L ++L+KRGITHLFPIQRAVL+PALEG+D+IARAKTGTGKTLAFGIPI+K+
Sbjct: 114  ISKLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKK 173

Query: 727  LTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQN 906
            LT DDE               VL PTRELA+QVEKEIKESAPYLNTVCVYGGVSYI QQN
Sbjct: 174  LTEDDESRSLRRRSRLPRVL-VLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQN 232

Query: 907  ALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPK 1086
            ALSRGVDVVVGTPGR            GEV+YLVLDEADQMLAVGFEEDVEVILE LP +
Sbjct: 233  ALSRGVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQ 292

Query: 1087 RQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSD 1266
            RQ+MLFSATMP WVKKLARKYLDNPLTIDLVGDQDEKLAEGIKL+AI TTA+SK+TIL D
Sbjct: 293  RQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRD 352

Query: 1267 LVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTV 1446
            LVTVYAKGGKTIVFTQTKRDADEVS+AL NSI SEALHGDISQH RERTLN FR GKFTV
Sbjct: 353  LVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTV 412

Query: 1447 LVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVR 1626
            LVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT+SQRRTVR
Sbjct: 413  LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVR 472

Query: 1627 SLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXX 1806
            SLERDVGC+FEF +PP +E+VL+SSA+QVV TL+GVHPES+E+F PTAQKLI+E+G    
Sbjct: 473  SLERDVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGAL 532

Query: 1807 XXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAAD 1986
                    GF+ PPSSRSLI+HEQGW TLQ+TRD  YSRG+LSARSVTGFLSDVY  AAD
Sbjct: 533  AAALAQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAAD 592

Query: 1987 EVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXX 2166
            E+GKI+LIADE++ GAVFDLPE+IAKELLNK++P GNTI KITKLP LQDD PPSDN   
Sbjct: 593  EIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDNYGR 652

Query: 2167 XXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGFQXXXXXXXXXXXXXXXXXARGDDW 2346
                                      +RDSD                       + GDDW
Sbjct: 653  FSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSGDDW 712

Query: 2347 LIXXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPDK 2466
            LI                 FGG+CFNCGR GHRAS+CPDK
Sbjct: 713  LIGGRRSSRSSSVDR----FGGSCFNCGRMGHRASECPDK 748


>ref|XP_007031306.1| DEAD box RNA helicase isoform 1 [Theobroma cacao]
            gi|508719911|gb|EOY11808.1| DEAD box RNA helicase isoform
            1 [Theobroma cacao]
          Length = 742

 Score =  888 bits (2295), Expect = 0.0
 Identities = 480/690 (69%), Positives = 519/690 (75%), Gaps = 4/690 (0%)
 Frame = +1

Query: 418  FVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXXS---ISNLGLPQQLVESL 588
            FV  A+ATPNSVLSE+AFKGL                         IS LGLPQ+LV+SL
Sbjct: 64   FVPRAVATPNSVLSEQAFKGLSLHQDQDGQDVYEAAASSNHDDELDISKLGLPQRLVDSL 123

Query: 589  EKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVD-DEXXXXXXX 765
             +RGITHLFPIQRAV +PAL+G+DIIARAKTGTGKTLAFGIPIIKRLT D  +       
Sbjct: 124  LQRGITHLFPIQRAVFVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTHDAPQQTSPRRM 183

Query: 766  XXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTP 945
                    VLAPTRELA+QVEKEIKESAPYLNTVCVYGGVSY  Q+NALSRGVDVVVGTP
Sbjct: 184  SGRLPRVLVLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYNTQRNALSRGVDVVVGTP 243

Query: 946  GRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGW 1125
            GR            GEV+YLVLDEADQMLAVGFEEDVE ILE LP KRQSMLFSATMP W
Sbjct: 244  GRIIDLIESSDLKLGEVEYLVLDEADQMLAVGFEEDVEEILENLPSKRQSMLFSATMPSW 303

Query: 1126 VKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIV 1305
            VKKLARKYLDNPL IDLVGDQDEKLAEGIKLYAI TT+++KRTILSDL+TVYAKGGKTIV
Sbjct: 304  VKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAISTTSTAKRTILSDLITVYAKGGKTIV 363

Query: 1306 FTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDVAARGLDI 1485
            FTQTKRDAD+VS+ALTNSIASEALHGDISQH RERTLN FR GKFTVLVATDVA+RGLDI
Sbjct: 364  FTQTKRDADDVSIALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDI 423

Query: 1486 PNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFI 1665
            PNV+LVIHYELPND ETFVHRSGRTGRAGKEGSAILMFT+SQRRTVRSLERDVGC+FEFI
Sbjct: 424  PNVELVIHYELPNDAETFVHRSGRTGRAGKEGSAILMFTNSQRRTVRSLERDVGCKFEFI 483

Query: 1666 SPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRP 1845
            S PAIE+VLESSA+Q+V+TL GVHP S+EFF PTAQ+LIEE+G            GFSRP
Sbjct: 484  SAPAIEEVLESSAEQIVATLNGVHPHSIEFFTPTAQRLIEEEGINALAAALAHLSGFSRP 543

Query: 1846 PSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKV 2025
            PSSRSLISHEQG  TLQ+TRDS YSRG+LSARSVTGFLSDVYP AADEVGK+YLIADE+V
Sbjct: 544  PSSRSLISHEQGLVTLQLTRDSSYSRGFLSARSVTGFLSDVYPVAADEVGKVYLIADERV 603

Query: 2026 QGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXX 2205
            QGAVFDLPE+IAKELLNKQ PPGNTI KITKLP LQDD P SD                 
Sbjct: 604  QGAVFDLPEEIAKELLNKQTPPGNTISKITKLPPLQDDGPSSDYYGKFSSRDRSPRGISK 663

Query: 2206 XXXXXXXXXXXXXNRDSDFEDGFQXXXXXXXXXXXXXXXXXARGDDWLIXXXXXXXXXXX 2385
                          R+SD E                     +  DDWLI           
Sbjct: 664  DRRGFRGSRSWSSGRNSDDE--------VRGGRSSWSRTSKSSRDDWLI---GSRRSKRS 712

Query: 2386 XXXXXGFGGACFNCGRSGHRASDCPDKQDY 2475
                  FGG+CFNCGR GHRASDCP+K D+
Sbjct: 713  SSHDRSFGGSCFNCGRPGHRASDCPEKLDF 742


>ref|XP_004302309.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 772

 Score =  887 bits (2293), Expect = 0.0
 Identities = 477/711 (67%), Positives = 529/711 (74%), Gaps = 24/711 (3%)
 Frame = +1

Query: 409  RSVFVSHAIATPNSVLSEEAFKGLGGFSKXXXXXXXXXXXXXXXX----------SISNL 558
            RSVF + AIATPNSVLSEEAFKGLGGFSK                          ++S L
Sbjct: 63   RSVFATQAIATPNSVLSEEAFKGLGGFSKEELDSESEYESESEVAEPAVGSKDELALSKL 122

Query: 559  GLPQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVD 738
            GLPQ+LV+SLE+RGI+ LFPIQRAVL+PALEG+DIIARAKTGTGKTLAFGIPI+KRLT D
Sbjct: 123  GLPQRLVDSLERRGISSLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPILKRLTED 182

Query: 739  DEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSR 918
            DE               VLAPTRELA+QVEKEIKESAPYLNTVCVYGGVSY+ QQ+ALSR
Sbjct: 183  DEQRGSRRSGYLPRVL-VLAPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSALSR 241

Query: 919  GVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSM 1098
            GVDVVVGTPGR             EVQYLVLDEADQMLAVGFE+DVE IL+ LP +RQSM
Sbjct: 242  GVDVVVGTPGRLIDLINGGSLKLSEVQYLVLDEADQMLAVGFEDDVETILQRLPAQRQSM 301

Query: 1099 LFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTV 1278
            LFSATMP WVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYA+ TT SSKRTILSDL+TV
Sbjct: 302  LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYALSTTNSSKRTILSDLITV 361

Query: 1279 YAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVAT 1458
            YAKGGKTIVFTQTKRDADEVSM+LT SIASEALHGDISQH RERTLN FR GKFTVLVAT
Sbjct: 362  YAKGGKTIVFTQTKRDADEVSMSLTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVAT 421

Query: 1459 DVAARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLER 1638
            DVA+RGLDIPNVDL+IHYELPND ETFVHRSGRTGRAGK G+A+LMFT++QRRTV++LER
Sbjct: 422  DVASRGLDIPNVDLIIHYELPNDSETFVHRSGRTGRAGKLGNAVLMFTNNQRRTVKTLER 481

Query: 1639 DVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXX 1818
            DVGC+FEF++PP +E+VLESSA  VV+TL GVHPES++FF PTAQKLIEE+GT       
Sbjct: 482  DVGCRFEFVTPPTVEEVLESSASHVVATLNGVHPESIKFFTPTAQKLIEEQGTTALAAAL 541

Query: 1819 XXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGK 1998
                GFSRPPSSRSLISHE GWTTLQ+ RD +++RGYLSARSVTGFLSDVY AAADEVGK
Sbjct: 542  AQLSGFSRPPSSRSLISHEPGWTTLQIIRDPEFARGYLSARSVTGFLSDVYSAAADEVGK 601

Query: 1999 IYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSDNXXXXXXX 2178
            IYLIADE+VQGAVFDLPE+IAKELL +Q+PPGN+I KI+KLP LQDD P SDN       
Sbjct: 602  IYLIADERVQGAVFDLPEEIAKELLKRQMPPGNSISKISKLPPLQDDGPVSDNYGRFSAR 661

Query: 2179 XXXXXXXXXXXXXXXXXXXXXXNRDS--------DFEDG------FQXXXXXXXXXXXXX 2316
                                     S        DF DG       +             
Sbjct: 662  DRSSRRGGFSGGRGGGGGRGGFRSSSRGGWGGGRDFSDGDDDFRSSRGSFNRSSSSSSRP 721

Query: 2317 XXXXARGDDWLIXXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPDKQ 2469
                +  DDWLI                 FGG+CFNCG+SGHRAS+CP K+
Sbjct: 722  RMTRSMDDDWLI---GGTRTGRIPSRDRSFGGSCFNCGQSGHRASECPSKK 769


>ref|XP_006355275.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum tuberosum]
          Length = 744

 Score =  887 bits (2291), Expect = 0.0
 Identities = 479/726 (65%), Positives = 541/726 (74%), Gaps = 13/726 (1%)
 Frame = +1

Query: 337  PLSL-LPGDKSHFGDKFPLRSSRPQRSVFVSHAIATPNS-VLSEEAFKGLGGFSKXXXXX 510
            PLSL    +KS+F     LR  RP    F++ A+ TPNS VLSEEAFKG+GGF K     
Sbjct: 31   PLSLPFSTEKSNFHVHVRLR--RP----FLASAVVTPNSSVLSEEAFKGIGGFGKDSLNV 84

Query: 511  XXXXXXXXXXX----------SISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQD 660
                                 ++S LGLP +LVE+LEKRGIT LFPIQRAVL+PALEG+D
Sbjct: 85   SESEYDSEDEVEDNESNEDELAVSKLGLPHRLVEALEKRGITQLFPIQRAVLVPALEGRD 144

Query: 661  IIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIK 840
            IIARAKTGTGKTLAFGIP++K+L+ D+E               VLAPTRELA QVEKE+K
Sbjct: 145  IIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRGRLPKIL-VLAPTRELANQVEKEMK 203

Query: 841  ESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEA 1020
            ESAPYLNTVC+YGGVSY  QQNALSRGVDVVVGTPGR            GEV+YLVLDEA
Sbjct: 204  ESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEA 263

Query: 1021 DQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKL 1200
            DQMLAVGFEEDVEVILE LPP+RQSMLFSATMPGWVKKL+RKYL+NPLTIDLVGDQDEKL
Sbjct: 264  DQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKL 323

Query: 1201 AEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALH 1380
            AEGIKLYA+  T++SKR+IL DLVTVYAKGGKTIVFTQTKRDADEVSMAL+NSI+SEALH
Sbjct: 324  AEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALH 383

Query: 1381 GDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRT 1560
            GDISQH RERTLN FR GKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 384  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 443

Query: 1561 GRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHP 1740
            GRAGKEG AILM+T SQRRTVRSLERDVGC+FEF+SPP++++VLESSA+ VV+ L GVHP
Sbjct: 444  GRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALTGVHP 503

Query: 1741 ESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYS 1920
            ESVE+FIPTAQ+L+E++G            GFS+PPSSRSLI+HEQGWTTLQ+TRDS+ S
Sbjct: 504  ESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSENS 563

Query: 1921 RGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNT 2100
            RG+LSARSVTGFLSDVY  AADE+GKI+LIADE+VQGA+FDLPE+IA +LLN+++PPGNT
Sbjct: 564  RGFLSARSVTGFLSDVYSPAADEIGKIHLIADERVQGAIFDLPEEIAADLLNQELPPGNT 623

Query: 2101 ICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGFQX 2280
            I KITKLPALQDD P  D                               R SD +D    
Sbjct: 624  ISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGFRDRRGRYSQGSSSGRFSDNDD---- 679

Query: 2281 XXXXXXXXXXXXXXXXARGDDWLI-XXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDC 2457
                              G DWLI                  FGGACFNCGRSGHRAS+C
Sbjct: 680  -DNWGNDSRSRGGRTRRGGSDWLISGDRRSSRSLSGGSRDRSFGGACFNCGRSGHRASEC 738

Query: 2458 PDKQDY 2475
            P+K+DY
Sbjct: 739  PNKRDY 744


>ref|XP_004244948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Solanum lycopersicum]
          Length = 746

 Score =  882 bits (2279), Expect = 0.0
 Identities = 478/728 (65%), Positives = 540/728 (74%), Gaps = 15/728 (2%)
 Frame = +1

Query: 337  PLSL-LPGDKSHFGDKFPLRSSRPQRSVFVSHAIATP-NSVLSEEAFKGLGGFSKXXXXX 510
            PLSL    +KS+F     LR  RP    F++ A+ TP +SVLSEEAFKG+GGF K     
Sbjct: 31   PLSLPFSIEKSNFHVHVRLR--RP----FLASAVVTPTSSVLSEEAFKGIGGFGKDSLNV 84

Query: 511  XXXXXXXXXXX----------SISNLGLPQQLVESLEKRGITHLFPIQRAVLLPALEGQD 660
                                 S+S LGLP +LV++LEKRGIT LFPIQRAVL+PALEG+D
Sbjct: 85   SESEYDSEDEVEDNESNEDELSVSKLGLPHRLVDALEKRGITQLFPIQRAVLVPALEGRD 144

Query: 661  IIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELARQVEKEIK 840
            IIARAKTGTGKTLAFGIP++K+L+ D+E               VLAPTRELA QVEKE+K
Sbjct: 145  IIARAKTGTGKTLAFGIPVLKKLSTDEEMRNTQRRGRLPKVL-VLAPTRELANQVEKEMK 203

Query: 841  ESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEA 1020
            ESAPYLNTVC+YGGVSY  QQNALSRGVDVVVGTPGR            GEV+YLVLDEA
Sbjct: 204  ESAPYLNTVCIYGGVSYATQQNALSRGVDVVVGTPGRLIDLINNNTLKLGEVEYLVLDEA 263

Query: 1021 DQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDLVGDQDEKL 1200
            DQMLAVGFEEDVEVILE LPP+RQSMLFSATMPGWVKKL+RKYL+NPLTIDLVGDQDEKL
Sbjct: 264  DQMLAVGFEEDVEVILEKLPPQRQSMLFSATMPGWVKKLSRKYLNNPLTIDLVGDQDEKL 323

Query: 1201 AEGIKLYAIPTTASSKRTILSDLVTVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALH 1380
            AEGIKLYA+  T++SKR+IL DLVTVYAKGGKTIVFTQTKRDADEVSMAL+NSI+SEALH
Sbjct: 324  AEGIKLYALSATSTSKRSILGDLVTVYAKGGKTIVFTQTKRDADEVSMALSNSISSEALH 383

Query: 1381 GDISQHHRERTLNSFRMGKFTVLVATDVAARGLDIPNVDLVIHYELPNDPETFVHRSGRT 1560
            GDISQH RERTLN FR GKFTVLVATDVA+RGLDIPNVDLVIHYELPNDPETFVHRSGRT
Sbjct: 384  GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRT 443

Query: 1561 GRAGKEGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHP 1740
            GRAGKEG AILM+T SQRRTVRSLERDVGC+FEF+SPP++++VLESSA+ VV+ L GVHP
Sbjct: 444  GRAGKEGIAILMYTGSQRRTVRSLERDVGCKFEFVSPPSVKEVLESSAEHVVAALNGVHP 503

Query: 1741 ESVEFFIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYS 1920
            ESVE+FIPTAQ+L+E++G            GFS+PPSSRSLI+HEQGWTTLQ+TRDS+ S
Sbjct: 504  ESVEYFIPTAQQLMEQQGVNSLAAALALLGGFSKPPSSRSLITHEQGWTTLQLTRDSETS 563

Query: 1921 RGYLSARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNT 2100
            RG+LSARSVTGFLSDVY  AADEVGKI+LIADE+VQGA+FDLPE+ A +LLN+++PPGNT
Sbjct: 564  RGFLSARSVTGFLSDVYSPAADEVGKIHLIADERVQGAIFDLPEETAADLLNQELPPGNT 623

Query: 2101 ICKITKLPALQDDRPPSDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDFEDGFQX 2280
            I KITKLPALQDD P  D                               R SD +D    
Sbjct: 624  ISKITKLPALQDDGPAGDFYGRFSSRDTRGTRGGLRDRRGRYSQGSSSGRYSDNDD---- 679

Query: 2281 XXXXXXXXXXXXXXXXARGDDWLI---XXXXXXXXXXXXXXXXGFGGACFNCGRSGHRAS 2451
                              G DWLI                    FGGACFNCGRSGHRAS
Sbjct: 680  -DNWGNDSRSRGGRTRRGGSDWLISGDRDKRSSRSFSGGSRDRSFGGACFNCGRSGHRAS 738

Query: 2452 DCPDKQDY 2475
            +CP+K+DY
Sbjct: 739  ECPNKRDY 746


>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
          Length = 786

 Score =  877 bits (2265), Expect = 0.0
 Identities = 485/673 (72%), Positives = 515/673 (76%), Gaps = 68/673 (10%)
 Frame = +1

Query: 340  LSLLPGDKSHFGD-KFP---------LRSSRPQRSVFVSHAIATPNSVLSEEAFKGLGGF 489
            LSL   DK+H G  K P         LR S  Q   FV  AIATPNSVLSEEAFKGLGGF
Sbjct: 28   LSLPFSDKTHLGVFKAPNTRVLSDASLRRSFKQGISFVPSAIATPNSVLSEEAFKGLGGF 87

Query: 490  SKXXXXXXXXXXXXXXXX-----------SISNLGLPQQLVESLEKRGITHLFPIQRAVL 636
            SK                           +++ LGLP +LVESLE+RGITHLFPIQRAVL
Sbjct: 88   SKDPLDVTDTDDDYDPEIEASAAAQEDELALAQLGLPPRLVESLEQRGITHLFPIQRAVL 147

Query: 637  LPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDEXXXXXXXXXXXXXXXVLAPTRELA 816
            +PALEG+D+IARAKTGTGKTLAFGIPIIKRL+ DDE               VLAPTRELA
Sbjct: 148  VPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVLVLAPTRELA 207

Query: 817  RQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGVDVVVGTPGRXXXXXXXXXXXXGEV 996
            +QVEKEIKESAPYL+TVCVYGGVSYI QQNALSRGVDVVVGTPGR            GEV
Sbjct: 208  KQVEKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEV 267

Query: 997  QYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLFSATMPGWVKKLARKYLDNPLTIDL 1176
            Q LVLDEADQMLAVGFEEDVEVILE LP +RQSMLFSATMP WVKKLARKYLDNPLTIDL
Sbjct: 268  QNLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDL 327

Query: 1177 -----------------------VGDQDEKLAEGIKLYAIPTTASSKRTILSDLVT---- 1275
                                   VGD DEKLAEGIKLYAIPTTA+SKRTILSDL+T    
Sbjct: 328  GNFCPHWGLNLEPPKNPPQTLDHVGDHDEKLAEGIKLYAIPTTATSKRTILSDLITKNIV 387

Query: 1276 -----------VYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNS 1422
                       VYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQH RERTLN 
Sbjct: 388  KDRGGFQYGHKVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNG 447

Query: 1423 FRMGKFTVLVATDVAARGLDIPNVDL---------VIHYELPNDPETFVHRSGRTGRAGK 1575
            FR GKFTVLVATDVAARGLDIPNVDL         +IHYELPNDPETFVHRSGRTGRAGK
Sbjct: 448  FRQGKFTVLVATDVAARGLDIPNVDLKYVDLLFLQIIHYELPNDPETFVHRSGRTGRAGK 507

Query: 1576 EGSAILMFTSSQRRTVRSLERDVGCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEF 1755
            EG+AILMFTSSQRRTV+SLERDVGC+FEFISPPAIE+VLESSA+QVV+TL GVHPESVEF
Sbjct: 508  EGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEF 567

Query: 1756 FIPTAQKLIEEKGTXXXXXXXXXXXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLS 1935
            F PTAQKLIEEKGT           GFS+PPS RSLISHEQGW TLQ+TRDS YSRG+LS
Sbjct: 568  FTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLS 627

Query: 1936 ARSVTGFLSDVYPAAADEVGKIYLIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKIT 2115
            ARSVTGFLSDVYP AADE+GKIYL+ADE+VQGAVFDLPE+IAKELLNKQ+PPGNTI KIT
Sbjct: 628  ARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKIT 687

Query: 2116 KLPALQDDRPPSD 2154
            KLPALQDD P  D
Sbjct: 688  KLPALQDDGPAGD 700


>ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Glycine max]
          Length = 771

 Score =  875 bits (2262), Expect = 0.0
 Identities = 481/710 (67%), Positives = 526/710 (74%), Gaps = 22/710 (3%)
 Frame = +1

Query: 400  RPQRSVFVSHAIATPNS-VLSEEAFKGLGG----FSKXXXXXXXXXXXXXXXXSISNLGL 564
            +P  + FV  A+ATPNS +LSEEAFKGLG     F                   IS L L
Sbjct: 59   KPTPTTFVPSAVATPNSSLLSEEAFKGLGRDFDEFDHASDSDSAAESVHPDELDISKLDL 118

Query: 565  PQQLVESLEKRGITHLFPIQRAVLLPALEGQDIIARAKTGTGKTLAFGIPIIKRLTVDDE 744
            P +LVESL+ RGIT LFPIQRAVL+PALEG+DIIARAKTGTGKTLAFGIPIIK LT +DE
Sbjct: 119  PSRLVESLQSRGITQLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLT-EDE 177

Query: 745  XXXXXXXXXXXXXXXVLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYINQQNALSRGV 924
                           VLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY+ QQ ALSRGV
Sbjct: 178  HAPSHRRSGRLPRFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQGALSRGV 237

Query: 925  DVVVGTPGRXXXXXXXXXXXXGEVQYLVLDEADQMLAVGFEEDVEVILETLPPKRQSMLF 1104
            DVVVGTPGR             EVQYLVLDEADQMLAVGFEEDVE+ILE LP +RQSMLF
Sbjct: 238  DVVVGTPGRIIDLINGNSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPAQRQSMLF 297

Query: 1105 SATMPGWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAIPTTASSKRTILSDLVTVYA 1284
            SATMP WVKKLARKYL+NPLTIDLVGD++EKLAEGIKLYAI  TA+SKRTILSDLVTVYA
Sbjct: 298  SATMPSWVKKLARKYLNNPLTIDLVGDEEEKLAEGIKLYAIAATATSKRTILSDLVTVYA 357

Query: 1285 KGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHHRERTLNSFRMGKFTVLVATDV 1464
            KGGKTIVFTQTKRDADEVS++LTNSI SEALHGDISQH RERTLN FR GKFTVLVATDV
Sbjct: 358  KGGKTIVFTQTKRDADEVSLSLTNSIMSEALHGDISQHQRERTLNGFRQGKFTVLVATDV 417

Query: 1465 AARGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFTSSQRRTVRSLERDV 1644
            AARGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGK+G+AIL++TSSQRRTVRSLERDV
Sbjct: 418  AARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKQGNAILLYTSSQRRTVRSLERDV 477

Query: 1645 GCQFEFISPPAIEDVLESSAQQVVSTLKGVHPESVEFFIPTAQKLIEEKGTXXXXXXXXX 1824
            GC+FEF+S PA+E+VLESSA+QVV+TL GVHPESV+FF PTAQ+LIEE+GT         
Sbjct: 478  GCKFEFVSAPAMEEVLESSAEQVVATLGGVHPESVQFFTPTAQRLIEEQGTSALAAALAQ 537

Query: 1825 XXGFSRPPSSRSLISHEQGWTTLQMTRDSDYSRGYLSARSVTGFLSDVYPAAADEVGKIY 2004
              GFSRPPSSRSLI+HEQGW TLQ+TRDSD SR Y SARS+TGFLSDVYPAAADEVGKI+
Sbjct: 538  LSGFSRPPSSRSLITHEQGWITLQLTRDSD-SRRYFSARSITGFLSDVYPAAADEVGKIH 596

Query: 2005 LIADEKVQGAVFDLPEDIAKELLNKQIPPGNTICKITKLPALQDDRPPSD--------NX 2160
            LIADEKVQGAVFDLPE+IAKELLN+ IPPGNT+ KITKLP+LQDD PPSD        + 
Sbjct: 597  LIADEKVQGAVFDLPEEIAKELLNRDIPPGNTVSKITKLPSLQDDGPPSDFYGRFSDRDR 656

Query: 2161 XXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDSDFED-----GFQXXXXXXXXXXXXXXXX 2325
                                        +R  D ED     G Q                
Sbjct: 657  SSRRGSTSRGGFSSRGGSASRDRRGFKSSRGWDVEDSGDDFGDQSSRRGGRNFKTGNSWS 716

Query: 2326 XARG----DDWLIXXXXXXXXXXXXXXXXGFGGACFNCGRSGHRASDCPD 2463
             A G    DDWLI                 FGG CFNCG SGHRASDCP+
Sbjct: 717  RAAGKSSGDDWLIGGGRRSSRPSSSDR---FGGTCFNCGESGHRASDCPN 763