BLASTX nr result
ID: Cocculus23_contig00001080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00001080
(1030 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 301 2e-79
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera] 296 7e-78
ref|XP_007045267.1| Zinc finger, C3HC4 type (RING finger) family... 292 1e-76
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 290 9e-76
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 289 1e-75
ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citr... 288 3e-75
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 288 3e-75
ref|XP_002312464.2| zinc finger family protein [Populus trichoca... 285 3e-74
ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Popu... 283 1e-73
ref|XP_007223310.1| hypothetical protein PRUPE_ppa007296mg [Prun... 278 3e-72
ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 276 8e-72
ref|XP_006583718.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 272 1e-70
ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 272 1e-70
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 271 4e-70
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 268 4e-69
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 267 6e-69
ref|XP_007045268.1| Zinc finger isoform 2 [Theobroma cacao] gi|5... 262 1e-67
ref|NP_176974.1| C3HC4-type RING finger domain-containing protei... 262 2e-67
gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis th... 261 3e-67
ref|XP_007160430.1| hypothetical protein PHAVU_002G321300g [Phas... 259 1e-66
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 301 bits (772), Expect = 2e-79
Identities = 163/295 (55%), Positives = 193/295 (65%), Gaps = 2/295 (0%)
Frame = +3
Query: 147 SLQLPVLEMAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPS 326
SLQ +L M+E S+ + T+APLLRPRQ ++R TLA+L+ RATGRRGPS
Sbjct: 1937 SLQFLLLTMSETSTTT--GTTAPLLRPRQGTAE-----QSARPTTLALLMGRATGRRGPS 1989
Query: 327 TLVRETAAMQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWIC 506
LVRETAA +LEERRADWG+SKPVVALD+ WN++F +VSIVML T RERPNTPIR+WIC
Sbjct: 1990 MLVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWIC 2049
Query: 507 GYALQCVVHVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIG--N 680
GYALQC VHVV VWLEYRRR R E+ + G G N
Sbjct: 2050 GYALQCGVHVVLVWLEYRRR--NRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFN 2107
Query: 681 RSSIAKRCESINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCV 860
+SS+ KRCES+NTMASFLWWIVGFYWV+SGGE LL++APRLYWL CV
Sbjct: 2108 QSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCV 2167
Query: 861 ALACMIGXXXXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
LAC+IG VAGQEGA+E+D+SMLPRYR+ N N+EK G
Sbjct: 2168 VLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEAN-NEEKSGVG 2221
>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 296 bits (759), Expect = 7e-78
Identities = 159/287 (55%), Positives = 188/287 (65%), Gaps = 2/287 (0%)
Frame = +3
Query: 171 MAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAA 350
M+E S+ + T+APLLRPRQ ++R TLA+L+ RATGRRGPS LVRETAA
Sbjct: 1 MSETSTTT--GTTAPLLRPRQGTAE-----QSARPTTLALLMGRATGRRGPSMLVRETAA 53
Query: 351 MQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVV 530
+LEERRADWG+SKPVVALD+ WN++F +VSIVML T RERPNTPIR+WICGYALQC V
Sbjct: 54 RELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGV 113
Query: 531 HVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIG--NRSSIAKRC 704
HVV VWLEYRRR R E+ + G G N+SS+ KRC
Sbjct: 114 HVVLVWLEYRRRSRRRVR--DEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRC 171
Query: 705 ESINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGX 884
ES+NTMASFLWWIVGFYWV+SGGE LL++APRLYWL CV LAC+IG
Sbjct: 172 ESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGI 231
Query: 885 XXXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+SMLPRYR+ N N+EK G
Sbjct: 232 ALCCCLPCIIAILYAVAGQEGASEADLSMLPRYRFEAN-NEEKSGVG 277
>ref|XP_007045267.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao] gi|508709202|gb|EOY01099.1| Zinc
finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao]
Length = 360
Score = 292 bits (748), Expect = 1e-76
Identities = 153/285 (53%), Positives = 185/285 (64%)
Frame = +3
Query: 171 MAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAA 350
++E ++V+ SD+ APLLRPRQ S A+R TLA+LL RATGRRG S LVRETAA
Sbjct: 6 LSETTTVA-SDSHAPLLRPRQPDAS------AARPATLALLLGRATGRRGASMLVRETAA 58
Query: 351 MQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVV 530
+LEERRADWG+SKPVVALD+ WN AF VS+ ML T+ ER NTPIR+WICGYALQC+V
Sbjct: 59 RELEERRADWGYSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLV 118
Query: 531 HVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCES 710
HVV VWLEYRRR + RT+ E+ G N+SS+ KRCES
Sbjct: 119 HVVLVWLEYRRRNVRRTSARDEERGDATSGDANDSEDEQDGIERSAFGSNQSSVTKRCES 178
Query: 711 INTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXX 890
+NTM SFLWWIVGFYWV+SGG LL++APRLYWL CV LAC+IG
Sbjct: 179 VNTMVSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 238
Query: 891 XXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+S+LP+YR+ + N K S G
Sbjct: 239 CCCLPCIIAILYAVAGQEGASEADLSILPKYRFQIINNGGKASVG 283
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 290 bits (741), Expect = 9e-76
Identities = 156/292 (53%), Positives = 188/292 (64%), Gaps = 4/292 (1%)
Frame = +3
Query: 162 VLEMAEVSSVSVSDTSAPLLRPRQ----QQGSINGESTASRTNTLAILLNRATGRRGPST 329
+L +SS S + T+APLL PRQ + S + S +R TLA+LL RATGRRGPS
Sbjct: 645 ILITTAMSSASSATTTAPLLLPRQGSDGRDSSSDLASPTTRPATLAMLLGRATGRRGPSM 704
Query: 330 LVRETAAMQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICG 509
LVRETAA +L+ERRADWG+SKPVVALD+ WN AF VVS+VML T ERPNTPIR+WICG
Sbjct: 705 LVRETAARELDERRADWGYSKPVVALDMMWNTAFVVVSVVMLILTRDERPNTPIRLWICG 764
Query: 510 YALQCVVHVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSS 689
YALQC VHV VW+EYRRR R R +E + G RSS
Sbjct: 765 YALQCFVHVALVWVEYRRRTSRRGRRTAEAQQSSEADANESDDEAAMDLG----APIRSS 820
Query: 690 IAKRCESINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALA 869
++KRCESINTM SFLWWIVGFYWV+SGG+ LL+ APRLYWL CV LA
Sbjct: 821 VSKRCESINTMVSFLWWIVGFYWVVSGGDRLLQDAPRLYWLSVVFLAFDVFFAIFCVVLA 880
Query: 870 CMIGXXXXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
C+IG VAGQEGA+E+D+S+LP+YR+ ++G +EK S G
Sbjct: 881 CLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFRISG-EEKSSVG 931
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 289 bits (739), Expect = 1e-75
Identities = 164/320 (51%), Positives = 192/320 (60%), Gaps = 6/320 (1%)
Frame = +3
Query: 84 ETLGRN*LKRDENGDFISRSPS----LQLPVLEMAEVSSVSV-SDTSAPLLRPRQQQGSI 248
+ L R + EN D + + L M+ S + SD+ APLLRPR S
Sbjct: 628 DKLARKIISAMENRDLVETKHTQWSHLYFTFASMSSSSDAAARSDSHAPLLRPRDPSVSP 687
Query: 249 NGESTASRTNTLAILLNRATGR-RGPSTLVRETAAMQLEERRADWGFSKPVVALDISWNL 425
N A+R TLA+LL RATGR GPS LVRETAA +LEERRADWG+SKPVVALDI WN
Sbjct: 688 N----AARPATLALLLGRATGRGHGPSMLVRETAARELEERRADWGYSKPVVALDIMWNS 743
Query: 426 AFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVFVWLEYRRRVMGRTTRGSEDGG 605
AF +VS ML T+ ERP+T IR+WICGYALQC+VHVV VW+EYRRR R R E GG
Sbjct: 744 AFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWMEYRRR-NTRRVRDDEMGG 802
Query: 606 RTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCESINTMASFLWWIVGFYWVMSGGETLL 785
Y R R+S KRCESINTMASFLWWIVGFYWV+SGG+ LL
Sbjct: 803 EDVRDVNNDSEDEEEDGIVY-RTSTRTSFTKRCESINTMASFLWWIVGFYWVVSGGDLLL 861
Query: 786 RSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXXXXXXXXXXXXXXVAGQEGATESDI 965
+ APRLYWL CV LAC+IG VAGQEGA+E+D+
Sbjct: 862 QDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADL 921
Query: 966 SMLPRYRYHVNGNDEKPSSG 1025
S+LP+YR+ V NDEK G
Sbjct: 922 SILPKYRFEVQNNDEKLGVG 941
>ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citrus clementina]
gi|557550773|gb|ESR61402.1| hypothetical protein
CICLE_v10015731mg [Citrus clementina]
Length = 359
Score = 288 bits (737), Expect = 3e-75
Identities = 156/277 (56%), Positives = 178/277 (64%), Gaps = 1/277 (0%)
Frame = +3
Query: 198 SDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGR-RGPSTLVRETAAMQLEERRA 374
SD+ APLLRPR S N A+R TLA+LL RATGR GPS LVRETAA +LEERRA
Sbjct: 11 SDSHAPLLRPRDPSVSPN----AARPATLALLLGRATGRGHGPSMLVRETAARELEERRA 66
Query: 375 DWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVFVWLE 554
DWG+SKPVVALDI WN AF +VS ML T+ ERP+T IR+WICGYALQC+VHVV VW+E
Sbjct: 67 DWGYSKPVVALDIMWNSAFVIVSAAMLIITINERPSTRIRLWICGYALQCLVHVVLVWME 126
Query: 555 YRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCESINTMASFL 734
YRRR R R E GG Y R R+S KRCESINTMASFL
Sbjct: 127 YRRR-NTRRVRDDEMGGEDVRDVNNDSEDEEEDGIVY-RTSTRTSFTKRCESINTMASFL 184
Query: 735 WWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXXXXXXXXX 914
WWIVGFYWV+SGG+ LL+ APRLYWL CV LAC+IG
Sbjct: 185 WWIVGFYWVVSGGDLLLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCII 244
Query: 915 XXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+S+LP+YR+ V NDEK G
Sbjct: 245 AILYAVAGQEGASEADLSILPKYRFEVQNNDEKLGVG 281
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 288 bits (737), Expect = 3e-75
Identities = 153/308 (49%), Positives = 190/308 (61%), Gaps = 11/308 (3%)
Frame = +3
Query: 135 SRSPSLQLPVLEMAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGR 314
+ S SL+L ++ + S++ APLL PRQ+ A R +LA+LL R TGR
Sbjct: 588 TNSISLRLSPPMSTTATTTAESESHAPLLHPRQE---------APRAASLAMLLGRVTGR 638
Query: 315 RGPSTLVRETAAMQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIR 494
RGPS LVRETAA++LEERRADWG+SKPVVALD+ WN AF VVSI ML +++E+PNTPIR
Sbjct: 639 RGPSMLVRETAALELEERRADWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIR 698
Query: 495 VWICGYALQCVVHVVFVWLEYRRRVMGRTTRGSE-----------DGGRTXXXXXXXXXX 641
+WICGYALQC+VHVV VW+EYRRR R R E +G
Sbjct: 699 IWICGYALQCLVHVVLVWIEYRRR-NSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSE 757
Query: 642 XXXXAGEYGRIGNRSSIAKRCESINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXX 821
NRSS+ KRCES+NTMASFLWWIVGFYWV+SGG+ LL++AP LYWL
Sbjct: 758 DEDGVDRASVTSNRSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVV 817
Query: 822 XXXXXXXXXXXCVALACMIGXXXXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNG 1001
CV LAC+IG VAGQEGA+E+D+S+LP+YR+ +
Sbjct: 818 FLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTV 877
Query: 1002 NDEKPSSG 1025
+EKPS G
Sbjct: 878 EEEKPSVG 885
>ref|XP_002312464.2| zinc finger family protein [Populus trichocarpa]
gi|550332992|gb|EEE89831.2| zinc finger family protein
[Populus trichocarpa]
Length = 351
Score = 285 bits (728), Expect = 3e-74
Identities = 145/273 (53%), Positives = 177/273 (64%)
Frame = +3
Query: 198 SDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAMQLEERRAD 377
++ APLLRPRQ + S SR TL+ LL RATGRRGPS LVRETAA +L+ERRAD
Sbjct: 5 NEPHAPLLRPRQDPPT----SPTSRQTTLSALLGRATGRRGPSMLVRETAARELDERRAD 60
Query: 378 WGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVFVWLEY 557
WG+SKPVV+LD+ WN AF VVS+ ML T++ERPNTPIR+WICGYALQC+VHVV VWLEY
Sbjct: 61 WGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVWLEY 120
Query: 558 RRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCESINTMASFLW 737
RRR T R + + I RSS+ KRCES+NTM SFLW
Sbjct: 121 RRR---NTRRERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLW 177
Query: 738 WIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXXXXXXXXXX 917
W+VGFYWV+SGG+ LL++APRLYWL CV LAC+IG
Sbjct: 178 WMVGFYWVVSGGDVLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 237
Query: 918 XXXXVAGQEGATESDISMLPRYRYHVNGNDEKP 1016
VAGQEGA+E+D+ LP+Y++ + N+EKP
Sbjct: 238 ILYAVAGQEGASEADLIQLPKYKFQMIRNEEKP 270
>ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Populus trichocarpa]
gi|550329589|gb|EEF00953.2| hypothetical protein
POPTR_0010s11660g [Populus trichocarpa]
Length = 327
Score = 283 bits (723), Expect = 1e-73
Identities = 149/274 (54%), Positives = 179/274 (65%)
Frame = +3
Query: 192 SVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAMQLEERR 371
S +D+ APLLRPRQ + TAS+T TLA+LL RATGRRGPS LVRETAA +L+ERR
Sbjct: 3 SENDSHAPLLRPRQDSPT---SPTASQT-TLAVLLGRATGRRGPSMLVRETAARELDERR 58
Query: 372 ADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVFVWL 551
AD G+SKPVVALDI WN AF VVS+ ML T +ERPNTPIR+WICGY+LQC+VHV+ VWL
Sbjct: 59 ADLGYSKPVVALDILWNAAFVVVSVTMLVVTAKERPNTPIRLWICGYSLQCLVHVILVWL 118
Query: 552 EYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCESINTMASF 731
EYRRR T RG + + + KRCES+NTM SF
Sbjct: 119 EYRRR---NTRRGRD-------------------------VESEQHFTKRCESVNTMVSF 150
Query: 732 LWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXXXXXXXX 911
LWWIVGFYWV+SGG+ LL++APRLYWL CV LAC+IG
Sbjct: 151 LWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCI 210
Query: 912 XXXXXXVAGQEGATESDISMLPRYRYHVNGNDEK 1013
VAGQEGA+E+D+S+LP+Y+Y V GN+EK
Sbjct: 211 IAILYAVAGQEGASEADLSILPKYKYLVMGNEEK 244
>ref|XP_007223310.1| hypothetical protein PRUPE_ppa007296mg [Prunus persica]
gi|462420246|gb|EMJ24509.1| hypothetical protein
PRUPE_ppa007296mg [Prunus persica]
Length = 374
Score = 278 bits (710), Expect = 3e-72
Identities = 146/293 (49%), Positives = 188/293 (64%), Gaps = 9/293 (3%)
Frame = +3
Query: 174 AEVSSVSVSDTSAPLLRPRQQQGSINGE---STASRTNTLAILLNRATGRRGPSTLVRET 344
+ ++ + +++ APLL PRQ + S +R TLA+LL RATGRRGPS LVRET
Sbjct: 5 SSATTAAAAESHAPLLLPRQASSGRDSSDLGSPTARPATLAMLLGRATGRRGPSMLVRET 64
Query: 345 AAMQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQC 524
AA +L+ERRADWG+SKPVVALD+ WN AF VVS+ ML T E PNTPIR+WICGYALQC
Sbjct: 65 AARELDERRADWGYSKPVVALDMMWNTAFVVVSVAMLIWTDHEHPNTPIRLWICGYALQC 124
Query: 525 VVHVVFVWLEYRRR--VMGRTTRGSEDG----GRTXXXXXXXXXXXXXXAGEYGRIGNRS 686
VHVV VW+EY+RR + R +R ++D + A I RS
Sbjct: 125 FVHVVLVWVEYQRRNNIARRISRRNQDAQQNQHQVEIDANDTDDEEAAAAARDLAISTRS 184
Query: 687 SIAKRCESINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVAL 866
S++KRCE++NTMASFLWWIVGFYWV++GGE LL++APRLYWL CV L
Sbjct: 185 SLSKRCETVNTMASFLWWIVGFYWVVAGGEVLLQNAPRLYWLAVVFLAFDVFFAIFCVVL 244
Query: 867 ACMIGXXXXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
AC+IG VAGQEGA+++D+S+LP+YR+ + ++EK S G
Sbjct: 245 ACLIGVALCCCLPCIIAILYAVAGQEGASDADLSILPKYRFR-SSSEEKSSVG 296
>ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cicer arietinum]
Length = 349
Score = 276 bits (707), Expect = 8e-72
Identities = 144/280 (51%), Positives = 173/280 (61%)
Frame = +3
Query: 186 SVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAMQLEE 365
+ V ++ APLLRPR + G R TLA+LL RATGRRGPS LVRETAA +LEE
Sbjct: 8 ATEVPESHAPLLRPRHEGG---------RGPTLALLLGRATGRRGPSVLVRETAARELEE 58
Query: 366 RRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVFV 545
RRADWG+SKPVVALD+SWN+AF +VS +L T+ ERPNTPIRVWI GYALQC VHVV V
Sbjct: 59 RRADWGYSKPVVALDMSWNMAFVIVSAAILLCTVDERPNTPIRVWIIGYALQCFVHVVLV 118
Query: 546 WLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCESINTMA 725
WLEY R R D R + + ++S KRCESINT
Sbjct: 119 WLEYHR-------RSRRDSRRRQRASDAETSSDGNDSDDGDENSSQSRFTKRCESINTGV 171
Query: 726 SFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXXXXXX 905
SF WW+VGFYWV+SGG+ LL+ APRLYWL CV LAC+IG
Sbjct: 172 SFFWWMVGFYWVVSGGDILLQGAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLP 231
Query: 906 XXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+S+LP+YR+ + N+EK S G
Sbjct: 232 CIIAILYAVAGQEGASEADLSILPKYRFQIVSNEEKASGG 271
>ref|XP_006583718.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X3 [Glycine
max]
Length = 309
Score = 272 bits (696), Expect = 1e-70
Identities = 146/284 (51%), Positives = 179/284 (63%), Gaps = 3/284 (1%)
Frame = +3
Query: 183 SSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAMQLE 362
+S+ ++ APLLRP +++ + TLA+LL RA GRRGPS LVRETAA +LE
Sbjct: 7 ASMEAPESHAPLLRPLT-------DASRAPVPTLALLLGRA-GRRGPSMLVRETAARELE 58
Query: 363 ERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVF 542
ERRADWG+SKPVVALD+SWN+AF VV+ VMLA T ERPNTPIRVWI GYALQC+VHV+
Sbjct: 59 ERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLL 118
Query: 543 VWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGE---YGRIGNRSSIAKRCESI 713
VWLEYRR R+ R S G R + + +RS KRCE +
Sbjct: 119 VWLEYRR----RSRRDSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSSRSRFTKRCELL 174
Query: 714 NTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXX 893
NT SFLWWIVGFYWV+SGG LL+ APRLYWL CV LAC+IG
Sbjct: 175 NTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALC 234
Query: 894 XXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+SMLP+YR+ + +++KPS G
Sbjct: 235 CCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGG 278
>ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1 [Glycine
max] gi|571466652|ref|XP_006583717.1| PREDICTED: E3
ubiquitin protein ligase RIE1-like isoform X2 [Glycine
max]
Length = 356
Score = 272 bits (696), Expect = 1e-70
Identities = 146/284 (51%), Positives = 179/284 (63%), Gaps = 3/284 (1%)
Frame = +3
Query: 183 SSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAMQLE 362
+S+ ++ APLLRP +++ + TLA+LL RA GRRGPS LVRETAA +LE
Sbjct: 7 ASMEAPESHAPLLRPLT-------DASRAPVPTLALLLGRA-GRRGPSMLVRETAARELE 58
Query: 363 ERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVF 542
ERRADWG+SKPVVALD+SWN+AF VV+ VMLA T ERPNTPIRVWI GYALQC+VHV+
Sbjct: 59 ERRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLL 118
Query: 543 VWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGE---YGRIGNRSSIAKRCESI 713
VWLEYRR R+ R S G R + + +RS KRCE +
Sbjct: 119 VWLEYRR----RSRRDSHHGQRARDVESDAGSGDEDYSDDRDWSSGYSSRSRFTKRCELL 174
Query: 714 NTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXX 893
NT SFLWWIVGFYWV+SGG LL+ APRLYWL CV LAC+IG
Sbjct: 175 NTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIALC 234
Query: 894 XXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+SMLP+YR+ + +++KPS G
Sbjct: 235 CCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGG 278
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 271 bits (692), Expect = 4e-70
Identities = 148/290 (51%), Positives = 178/290 (61%), Gaps = 7/290 (2%)
Frame = +3
Query: 177 EVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRG------PSTLVR 338
E S+ SD + PLL R + G G R ++LA+LL R TGRRG S LVR
Sbjct: 599 EPPSMISSDPTTPLLHRRLENGGRGG-----RQSSLAVLLGRVTGRRGGGGGGGASLLVR 653
Query: 339 ETAAMQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYAL 518
ETAA +L+ERRADWG+SKPVVALD+ WNL F +VS+V+L+ + E PN PIRVWICGYAL
Sbjct: 654 ETAARELDERRADWGYSKPVVALDMMWNLGFVIVSVVILSCAVDESPNVPIRVWICGYAL 713
Query: 519 QCVVHVVFVWLEYRRR-VMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIA 695
QCVVHVV VWLEYRRR + G T DG IGN+SSIA
Sbjct: 714 QCVVHVVLVWLEYRRRSLQGGTDAEGNDG------------VDGEERNGVLAIGNQSSIA 761
Query: 696 KRCESINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACM 875
KRCE +NTM S LWWIVGFYW++SGGE LL++AP LYWL CVALAC+
Sbjct: 762 KRCEYMNTMGSLLWWIVGFYWIVSGGEILLQNAPHLYWLAVVFLAFDVFFAIFCVALACL 821
Query: 876 IGXXXXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
IG V GQEGA+E D+ +LP+YR+H+ N+EKP G
Sbjct: 822 IGVALCCCLPCIIAVLYAV-GQEGASEEDLRVLPKYRFHICKNEEKPRVG 870
>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 268 bits (684), Expect = 4e-69
Identities = 147/286 (51%), Positives = 176/286 (61%), Gaps = 2/286 (0%)
Frame = +3
Query: 174 AEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAM 353
++ + + PLLR R G G + A LA+LL RA GRRGPS LVRETAA
Sbjct: 3 SQTAPTEAPEPYTPLLRSRTDAG--RGPAPA-----LALLLGRA-GRRGPSMLVRETAAR 54
Query: 354 QLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVH 533
+LEERRADWG+SKPVVALD+SWN+AF VVS MLA T E P TPIRVWI GYALQC+VH
Sbjct: 55 ELEERRADWGYSKPVVALDMSWNMAFVVVSAAMLACTTSEHPTTPIRVWIVGYALQCLVH 114
Query: 534 VVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGN--RSSIAKRCE 707
V+ VWLEYRRR + GS+ G+ G GN RS AKRCE
Sbjct: 115 VLLVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGD-GSSGNTSRSRFAKRCE 173
Query: 708 SINTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXX 887
S+NT SFLWWIVGFYWV+SGG+ LL+ APRLYWL CV LAC+IG
Sbjct: 174 SLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 233
Query: 888 XXXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+SMLP+Y++ + + +KPS G
Sbjct: 234 LCCCLPCIIAILYAVAGQEGASEADLSMLPKYKFRILSDVDKPSGG 279
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 267 bits (682), Expect = 6e-69
Identities = 145/284 (51%), Positives = 178/284 (62%), Gaps = 8/284 (2%)
Frame = +3
Query: 198 SDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRG-----PSTLVRETAAMQLE 362
SD + PLL R + G G R ++LA+LL R TGRRG S LVRETAA +L+
Sbjct: 702 SDPTTPLLHRRLENGGRGG-----RQSSLAVLLGRVTGRRGGGGGGASLLVRETAARELD 756
Query: 363 ERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVF 542
ERRADWG+SKPVVALD+ WNL F +VS V+L+ + E PN PIR+WICGYALQCVVHVV
Sbjct: 757 ERRADWGYSKPVVALDMMWNLGFVIVSFVILSCAVDESPNVPIRLWICGYALQCVVHVVL 816
Query: 543 VWLEYRRRVM--GRTTRGSE-DGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCESI 713
VWLEYRRR + G G++ +GG G G IGN+SS AKRCE +
Sbjct: 817 VWLEYRRRSLQGGTDVEGNDGEGGEERN-------------GVLG-IGNQSSFAKRCEYM 862
Query: 714 NTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXX 893
NTM S LWWI+GFYW++SGGE LL++AP LYWL CVALAC+IG
Sbjct: 863 NTMGSLLWWIIGFYWIVSGGEILLQNAPHLYWLAVVFLAFDVFFAIFCVALACLIGVALC 922
Query: 894 XXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
V GQEGA+E D+ +LP+YR+H+ N+EKP G
Sbjct: 923 CCLPCIIAVLYAV-GQEGASEEDLRVLPKYRFHICKNEEKPRVG 965
>ref|XP_007045268.1| Zinc finger isoform 2 [Theobroma cacao] gi|508709203|gb|EOY01100.1|
Zinc finger isoform 2 [Theobroma cacao]
Length = 256
Score = 262 bits (670), Expect = 1e-67
Identities = 139/257 (54%), Positives = 164/257 (63%)
Frame = +3
Query: 171 MAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAA 350
++E ++V+ SD+ APLLRPRQ S A+R TLA+LL RATGRRG S LVRETAA
Sbjct: 6 LSETTTVA-SDSHAPLLRPRQPDAS------AARPATLALLLGRATGRRGASMLVRETAA 58
Query: 351 MQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVV 530
+LEERRADWG+SKPVVALD+ WN AF VS+ ML T+ ER NTPIR+WICGYALQC+V
Sbjct: 59 RELEERRADWGYSKPVVALDMLWNTAFVAVSVAMLICTVDERTNTPIRLWICGYALQCLV 118
Query: 531 HVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCES 710
HVV VWLEYRRR + RT+ E+ G N+SS+ KRCES
Sbjct: 119 HVVLVWLEYRRRNVRRTSARDEERGDATSGDANDSEDEQDGIERSAFGSNQSSVTKRCES 178
Query: 711 INTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXX 890
+NTM SFLWWIVGFYWV+SGG LL++APRLYWL CV LAC+IG
Sbjct: 179 VNTMVSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIAL 238
Query: 891 XXXXXXXXXXXXXVAGQ 941
VAGQ
Sbjct: 239 CCCLPCIIAILYAVAGQ 255
>ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana] gi|12324089|gb|AAG52017.1|AC012563_27 putative
RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana] gi|90093276|gb|ABD85151.1| At1g68070
[Arabidopsis thaliana] gi|332196622|gb|AEE34743.1|
C3HC4-type RING finger domain-containing protein
[Arabidopsis thaliana]
Length = 343
Score = 262 bits (669), Expect = 2e-67
Identities = 139/285 (48%), Positives = 175/285 (61%)
Frame = +3
Query: 171 MAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAA 350
M+ S S SD+S PLLR RQ S+ R +A+LLNRA+GRRG S +VRETAA
Sbjct: 1 MSSPESPSGSDSSTPLLRSRQ--------SSPRRQPVIAVLLNRASGRRGASMVVRETAA 52
Query: 351 MQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVV 530
+LEERRADWG+SKPVVALD+ WN AF +V+IVML E+PN PIR+WICGYA+QC+V
Sbjct: 53 QELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLV 112
Query: 531 HVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCES 710
HVV VWLE+R+R R+ G + + E R K CES
Sbjct: 113 HVVLVWLEFRKR-NARSRPGDLEAAQATNQD-----------SEDEDNDERFLSTKTCES 160
Query: 711 INTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXX 890
+NT+ SF+WWIVGFYW++SGG+ LL++A LYWL CV LAC+IG
Sbjct: 161 MNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIAL 220
Query: 891 XXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+S+LP+YR+H NDEK S G
Sbjct: 221 CCCLPCIIALLYAVAGQEGASEADLSILPKYRFHTMNNDEKQSDG 265
>gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 261 bits (667), Expect = 3e-67
Identities = 138/285 (48%), Positives = 175/285 (61%)
Frame = +3
Query: 171 MAEVSSVSVSDTSAPLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAA 350
M+ S S SD+S PL+R RQ S+ R +A+LLNRA+GRRG S +VRETAA
Sbjct: 1 MSSPESPSGSDSSTPLIRSRQ--------SSPRRQPVIAVLLNRASGRRGASMVVRETAA 52
Query: 351 MQLEERRADWGFSKPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVV 530
+LEERRADWG+SKPVVALD+ WN AF +V+IVML E+PN PIR+WICGYA+QC+V
Sbjct: 53 QELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLV 112
Query: 531 HVVFVWLEYRRRVMGRTTRGSEDGGRTXXXXXXXXXXXXXXAGEYGRIGNRSSIAKRCES 710
HVV VWLE+R+R R+ G + + E R K CES
Sbjct: 113 HVVLVWLEFRKR-NARSRPGDLEAAQATNQD-----------SEDEDNDERFLSTKTCES 160
Query: 711 INTMASFLWWIVGFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXX 890
+NT+ SF+WWIVGFYW++SGG+ LL++A LYWL CV LAC+IG
Sbjct: 161 MNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIGIAL 220
Query: 891 XXXXXXXXXXXXXVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+E+D+S+LP+YR+H NDEK S G
Sbjct: 221 CCCLPCIIALLYAVAGQEGASEADLSILPKYRFHTMNNDEKQSDG 265
>ref|XP_007160430.1| hypothetical protein PHAVU_002G321300g [Phaseolus vulgaris]
gi|561033845|gb|ESW32424.1| hypothetical protein
PHAVU_002G321300g [Phaseolus vulgaris]
Length = 345
Score = 259 bits (662), Expect = 1e-66
Identities = 139/273 (50%), Positives = 169/273 (61%), Gaps = 1/273 (0%)
Frame = +3
Query: 210 APLLRPRQQQGSINGESTASRTNTLAILLNRATGRRGPSTLVRETAAMQLEERRADWGFS 389
APLL PR ++ A+R LA+LL GRRG S +VRETAA +LEERRADW +S
Sbjct: 12 APLLLPRP-------DAAAARLPVLALLL----GRRGHSAVVRETAARELEERRADWTYS 60
Query: 390 KPVVALDISWNLAFTVVSIVMLASTLRERPNTPIRVWICGYALQCVVHVVFVWLEYRRRV 569
KPVVALD++WN+AF VVS+VMLA T++E+PN PIR WICGYALQC+VHV VWLEYRRR
Sbjct: 61 KPVVALDVTWNMAFVVVSVVMLACTVKEKPNMPIRWWICGYALQCLVHVALVWLEYRRR- 119
Query: 570 MGRTTRGSEDGGRTXXXXXXXXXXXXXXAGE-YGRIGNRSSIAKRCESINTMASFLWWIV 746
R E GG + E Y G KRC S+NTM S LWW+V
Sbjct: 120 -SDVPRDEESGGHLDYDDVNDSDEEDVGSSESYFSTG----FTKRCTSLNTMVSLLWWMV 174
Query: 747 GFYWVMSGGETLLRSAPRLYWLXXXXXXXXXXXXXXCVALACMIGXXXXXXXXXXXXXXX 926
GFYWV+SGG+ LL+ APRLYWL CV LAC+IG
Sbjct: 175 GFYWVVSGGDVLLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY 234
Query: 927 XVAGQEGATESDISMLPRYRYHVNGNDEKPSSG 1025
VAGQEGA+ESD+S+LP++R+ + N+E PS G
Sbjct: 235 AVAGQEGASESDLSVLPKFRFQMISNEETPSKG 267