BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00000855
         (1957 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             627   e-177
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              620   e-175
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   620   e-175
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   620   e-175
ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prun...   618   e-174
ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing pr...   608   e-171
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   605   e-170
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   595   e-167
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   594   e-167
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   592   e-166
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   590   e-166
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   588   e-165
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   585   e-164
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   544   e-152
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   543   e-151
ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutr...   543   e-151
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   540   e-150
ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A...   536   e-149
ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chlorop...   507   e-141
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   493   e-136

>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  627 bits (1616), Expect = e-177
 Identities = 341/582 (58%), Positives = 393/582 (67%), Gaps = 25/582 (4%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXSL---LTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLH 1692
            MALK   P  IF             L T++RFSRWNNANAEK+  R RT QQIE +IR  
Sbjct: 1    MALKLPIPFPIFAPHLNPSPPQYHRLPTELRFSRWNNANAEKFNERRRTLQQIEDDIRRQ 60

Query: 1691 RRYQSASKI------AAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKP 1530
            RR+ SA++I      A+P+     T          FKSIGTPSSPSRPSIPGK+SKYSK 
Sbjct: 61   RRFDSATRISDIPDSASPSTAGSATGE-------FFKSIGTPSSPSRPSIPGKKSKYSKN 113

Query: 1529 PKNSTNRHHHPHPAFSRVTRV----------------ELDDATDVVLGESGVGYRIPNAP 1398
            P  S +   HP  AF  + RV                +++   DV +GE GV Y I  AP
Sbjct: 114  PNPSFDSRSHP--AFRPLRRVRKIAVKELSGLPKDKRDVERKADVRVGEDGVSYVIDGAP 171

Query: 1397 FEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPH 1218
            FEF+YSYTETPK +P+ LREAPY+PFGP TMPRPWTGRAP P SKKKL EFDSF+L PPH
Sbjct: 172  FEFKYSYTETPKAQPVKLREAPYAPFGPTTMPRPWTGRAPLPPSKKKLKEFDSFRLSPPH 231

Query: 1217 KKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLT 1038
            KKGVKPVQAPGPFL G GPKYV SR+EILGEPLTEEE+K L++GC +++RQ+NMGRDGLT
Sbjct: 232  KKGVKPVQAPGPFLPGSGPKYVMSREEILGEPLTEEEIKDLIEGCRKTKRQMNMGRDGLT 291

Query: 1037 HNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXX 858
            HNMLDNIHAHWKRRRVCKIKCKG CTVDM+NV +QLEE+TGG IIY              
Sbjct: 292  HNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKEQLEERTGGKIIYGKGGVIFLFRGRNY 351

Query: 857  XXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSD 678
                    PLMLWKP+TPVYPRLV++ PEGLT+EEA+EMRK+GHKL PICKLGKNGVY +
Sbjct: 352  NYRTRPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEAKEMRKKGHKLMPICKLGKNGVYHN 411

Query: 677  LVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKS 498
            LVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVL+SFA EHIL+WRG DWKS
Sbjct: 412  LVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLSFAFEHILIWRGCDWKS 471

Query: 497  LFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQETSALCVQSGSGGVACAEMHNLII 318
              PK      E KE + +  T+  PS          E   + + +GS   A  E   LI 
Sbjct: 472  SLPKLVKDRDEAKESDVQIVTSVAPSV---------EGEEVAMSTGSVNDASLE---LIS 519

Query: 317  STSGNEHSEETNDISDSAKEDQTSNSSTLGVYASSSTGSVQS 192
            +TS    S E   I    +ED   +SS   V   S+TG V +
Sbjct: 520  TTSTLNRSHEV--IGTEGRED---SSSVEYVEPCSTTGDVSN 556


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  620 bits (1600), Expect = e-175
 Identities = 319/521 (61%), Positives = 370/521 (71%), Gaps = 10/521 (1%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            +++RFSRWNNANAE++  RER Q++IE  IR  RR+ SA++IA      +   +K     
Sbjct: 23   SEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADID---DAGTSKEAAAA 79

Query: 1610 PIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTR--------VELDD 1455
              FKS GTPSSPS+PSIPGK SKYSK  K S       HPAF +++R        +  + 
Sbjct: 80   GTFKSTGTPSSPSKPSIPGKSSKYSKNSKTS-------HPAFRQISRRTKLPGPNISPEA 132

Query: 1454 ATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPH 1275
               + +GE GV Y +P  PFE +YSYTETPKVKP+ALRE P+ PFGP+TMPRPWTGRAP 
Sbjct: 133  KRGISIGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPL 192

Query: 1274 PTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVL 1095
            P SKKKL EFDSF+LPPP KK VKPVQAPGPFL G GP+YV+SR+EILGEPLTEEE+K L
Sbjct: 193  PPSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKEL 252

Query: 1094 VQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTG 915
            VQGC++S+RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG CTVDM+NV QQLEEKTG
Sbjct: 253  VQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTG 312

Query: 914  GNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRK 735
            G +IY                      PLMLWKP+TPVYPRLVQ+ PEGLT+EEA  MRK
Sbjct: 313  GKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRK 372

Query: 734  RGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCV 555
            +G KL PICKL KNGVY+DLV +VREAFEECELVRINCQG+N SDYRKIGAKLKDLVPCV
Sbjct: 373  KGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCV 432

Query: 554  LISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQETSAL 375
            LISF HEHILMWRG DWK L PK E+G  E KE +  S  + PP F        QE SA 
Sbjct: 433  LISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPF------EGQELSAS 486

Query: 374  CVQSGSGGVACAEMHNLIISTSGNEH--SEETNDISDSAKE 258
            C    S      +M + I S   NE    ++T D+S    +
Sbjct: 487  CSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGND 527


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  620 bits (1600), Expect = e-175
 Identities = 319/521 (61%), Positives = 370/521 (71%), Gaps = 10/521 (1%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            +++RFSRWNNANAE++  RER Q++IE  IR  RR+ SA++IA      +   +K     
Sbjct: 23   SEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADID---DAGTSKEAAAA 79

Query: 1610 PIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTR--------VELDD 1455
              FKS GTPSSPS+PSIPGK SKYSK  K S       HPAF +++R        +  + 
Sbjct: 80   GTFKSTGTPSSPSKPSIPGKSSKYSKNSKTS-------HPAFRQISRRTKLPGPNISPEA 132

Query: 1454 ATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPH 1275
               + +GE GV Y +P  PFE +YSYTETPKVKP+ALRE P+ PFGP+TMPRPWTGRAP 
Sbjct: 133  KRGISIGEDGVSYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPL 192

Query: 1274 PTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVL 1095
            P SKKKL EFDSF+LPPP KK VKPVQAPGPFL G GP+YV+SR+EILGEPLTEEE+K L
Sbjct: 193  PPSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKEL 252

Query: 1094 VQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTG 915
            VQGC++S+RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG CTVDM+NV QQLEEKTG
Sbjct: 253  VQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTG 312

Query: 914  GNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRK 735
            G +IY                      PLMLWKP+TPVYPRLVQ+ PEGLT+EEA  MRK
Sbjct: 313  GKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRK 372

Query: 734  RGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCV 555
            +G KL PICKL KNGVY+DLV +VREAFEECELVRINCQG+N SDYRKIGAKLKDLVPCV
Sbjct: 373  KGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCV 432

Query: 554  LISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQETSAL 375
            LISF HEHILMWRG DWK L PK E+G  E KE +  S  + PP F        QE SA 
Sbjct: 433  LISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPF------EGQELSAS 486

Query: 374  CVQSGSGGVACAEMHNLIISTSGNEH--SEETNDISDSAKE 258
            C    S      +M + I S   NE    ++T D+S    +
Sbjct: 487  CSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGND 527


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  620 bits (1599), Expect = e-175
 Identities = 323/521 (61%), Positives = 377/521 (72%), Gaps = 13/521 (2%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            T++RF+RWNNANAEK+  R R QQ+IE + R  RR+ SA++IA  +     T+    D E
Sbjct: 31   TEVRFARWNNANAEKFNQRRRAQQEIEDDFRRERRFDSATRIATVSVAGSSTS----DAE 86

Query: 1610 PIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRV-----------E 1464
              FKSIGTPSSPSRPSIPGK+SKYS+ P    N +   HPAF RV +            E
Sbjct: 87   TAFKSIGTPSSPSRPSIPGKKSKYSENP----NPNPSSHPAFRRVIKPTKLSSITREKPE 142

Query: 1463 LDDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGR 1284
            +D   ++ +G+ G+ Y I  APFEF+YSYTETPK KP+ LRE PY+PFGP TM RPWTGR
Sbjct: 143  VDRKANISIGDDGLSYVIDGAPFEFKYSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGR 202

Query: 1283 APHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEV 1104
            AP P SKKK+ EFDSF+LPPPHKKGV+PVQ+PGP+L G GPKYV+SR+EILG+PLT++EV
Sbjct: 203  APLPASKKKMKEFDSFQLPPPHKKGVRPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEV 262

Query: 1103 KVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEE 924
            K LV GC+++RRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG CTVDMENVCQQLEE
Sbjct: 263  KDLVNGCIKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEE 322

Query: 923  KTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEARE 744
            +TGG IIY                      PLMLW+PITPVYPRL+Q+ PEGLT+EEA E
Sbjct: 323  RTGGKIIYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATE 382

Query: 743  MRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLV 564
            MRK+G  L PI KLGKNGVYSDLV +VREAFEECELVRI+CQGMNGSDYRKIGAKLKDLV
Sbjct: 383  MRKKGRDLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGSDYRKIGAKLKDLV 442

Query: 563  PCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQET 384
            PCVLISF  E ILMWRGR+WKS     E+   EVK    ES   D PS A   SL  ++ 
Sbjct: 443  PCVLISFERESILMWRGREWKSSLVNPESNLKEVK----ESNVDDSPSIA--LSLEGEDA 496

Query: 383  SALCVQSGSGGVACAEMHNLIISTSGNE--HSEETNDISDS 267
            S +C  +GS   A  EM +  IS+S  E   +E T D S S
Sbjct: 497  STVCAFTGSVKDANPEMIDTSISSSIAEVVGAEGTEDPSPS 537


>ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
            gi|462399316|gb|EMJ04984.1| hypothetical protein
            PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  618 bits (1594), Expect = e-174
 Identities = 317/522 (60%), Positives = 369/522 (70%), Gaps = 14/522 (2%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            T++RF+RWNNANAEK+  R R QQ+IE +IR  RR+ SA++IA       +T    +   
Sbjct: 31   TEVRFARWNNANAEKFNERRRAQQEIEDDIRRERRFDSATRIATIYDSATDTTTTSET-- 88

Query: 1610 PIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRVE----------- 1464
              FKS+GTPS PS PSIPGK+SKYSK P    +     HPAF R+ R             
Sbjct: 89   --FKSVGTPSFPSSPSIPGKKSKYSKNPNPKES-----HPAFRRIIRPTKLSKIPKDKGP 141

Query: 1463 -LDDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTG 1287
             +D   ++ +G+ G+ Y I  APFEF+YSYTETPKVKPL LRE  Y+PFGP TM RPWTG
Sbjct: 142  TVDRKANISVGDDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMARPWTG 201

Query: 1286 RAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEE 1107
            RAP P SKKKL EFDSF+LPPPHKKGVKPVQ+PGP+L G GPKYV+SRDEILG+PLT EE
Sbjct: 202  RAPLPPSKKKLKEFDSFQLPPPHKKGVKPVQSPGPYLPGSGPKYVKSRDEILGDPLTPEE 261

Query: 1106 VKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLE 927
            VK LV+GC+++RRQLNMGRDG THNMLDNIHAHWKRRRVCKIKCKG CTVDM+NVC+Q+E
Sbjct: 262  VKELVKGCIKTRRQLNMGRDGFTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCEQIE 321

Query: 926  EKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAR 747
            EKTGG IIY                      PLMLW+PITPVYPRLVQ+ PEGLT+EEA 
Sbjct: 322  EKTGGKIIYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQRAPEGLTLEEAT 381

Query: 746  EMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDL 567
            EMRK+G  L PICKLGKNGVYS+L K+ REAFEECELVRINC GMNGSDYRKIGAKLKDL
Sbjct: 382  EMRKKGRNLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGSDYRKIGAKLKDL 441

Query: 566  VPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQE 387
            VPCVLISF  EHILMWRGR+WKS  P  EN   EVK  + +  T+  P       L  QE
Sbjct: 442  VPCVLISFELEHILMWRGREWKSSIPYPENDLKEVKGSDVDDSTSIAP------PLEGQE 495

Query: 386  TSALCVQSGSGGVACAEMHNLIISTSGNE--HSEETNDISDS 267
             S  C  + S   A  E+ N    + G+E   +EE+ D+S S
Sbjct: 496  ESTSCASTVSVKDASLEILNTSTPSIGSEVVGAEESGDLSPS 537


>ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao] gi|508783438|gb|EOY30694.1| RNA-binding
            CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  608 bits (1568), Expect = e-171
 Identities = 310/513 (60%), Positives = 368/513 (71%), Gaps = 8/513 (1%)
 Frame = -3

Query: 1874 ELPLMALKFTPPLTIFXXXXXXXXSLLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRL 1695
            +LP+    F PPL               T+IRFSRWNNANAEK+  R+R QQ+IE +IR 
Sbjct: 4    KLPISFPIFAPPLPNPYPNPNEPAHRPPTEIRFSRWNNANAEKFNQRQRAQQEIEDDIRR 63

Query: 1694 HRRYQSASKIAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPPKNST 1515
            +RR+ SA+KIA       + ++    P   +KS+G+PSSPS PSIPGK+SKYSKPP    
Sbjct: 64   YRRFDSATKIAITI----DPSSASPRPTETYKSLGSPSSPSNPSIPGKKSKYSKPPN--- 116

Query: 1514 NRHHHPHPAFSRVTRVE-------LDDA-TDVVLGESGVGYRIPNAPFEFQYSYTETPKV 1359
                  HPAF + ++         LD    +V +G+ G+ + I  APFEF+YSYTETPKV
Sbjct: 117  ------HPAFRKFSKTANPPPPTPLDKKPANVSIGDDGISFVIDGAPFEFKYSYTETPKV 170

Query: 1358 KPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPF 1179
            KP+ LRE PYSPFGP TMPRPWTGRAP P SKKK+ EFDSF LPPP+KKGVKP+Q PGP+
Sbjct: 171  KPIKLREPPYSPFGPSTMPRPWTGRAPLPPSKKKMKEFDSFVLPPPNKKGVKPIQKPGPY 230

Query: 1178 LAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKR 999
            L G GP+YVQSR+EILGEPL  EEVK LV GCL+S+RQLNMGRDGLTHNMLDNIHAHWKR
Sbjct: 231  LPGTGPRYVQSREEILGEPLNAEEVKELVNGCLKSKRQLNMGRDGLTHNMLDNIHAHWKR 290

Query: 998  RRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLW 819
            RRVCKIKCKG CTVDM+NVC+QLEE+TGG +IY                      PLMLW
Sbjct: 291  RRVCKIKCKGVCTVDMDNVCEQLEERTGGKVIYRRGGVLFLFRGRNYNYKTRPRFPLMLW 350

Query: 818  KPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECE 639
            KP+TP+YPRL+Q+ PEGLT+EE  EMRK+G KL PICKL KNGVYSDLVK+VREAFEECE
Sbjct: 351  KPVTPMYPRLIQKAPEGLTVEEMSEMRKKGRKLMPICKLAKNGVYSDLVKNVREAFEECE 410

Query: 638  LVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVK 459
            LVR+NC+G+ GSDYRKIGAKLK+LVPCVLISF +E ILMWRGR+WKS F K     S V+
Sbjct: 411  LVRVNCEGIKGSDYRKIGAKLKELVPCVLISFENESILMWRGRNWKSSFLKPAFN-SGVE 469

Query: 458  EFETESPTADPPSFADSSSLRDQETSALCVQSG 360
            E + E+ T      +    L  QE S +CVQ+G
Sbjct: 470  ERDAENAT------SILGQLEGQELSPVCVQAG 496


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  605 bits (1560), Expect = e-170
 Identities = 309/491 (62%), Positives = 353/491 (71%), Gaps = 11/491 (2%)
 Frame = -3

Query: 1862 MALKFTP-PLTIFXXXXXXXXSLLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRR 1686
            MALK  P P  IF           +T++ FSRW NANA+K+  R R+QQ+IE +I   RR
Sbjct: 1    MALKLFPTPFPIFAPPSPNPSHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRR 60

Query: 1685 YQSASKIAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRH 1506
            + SA+ I        +  N  +     FKS GTPSSPS PSIPGK+SKYSKP K +    
Sbjct: 61   FTSANNIVTNY----DPKNAAEVDISFFKSTGTPSSPSSPSIPGKKSKYSKPLKKT---- 112

Query: 1505 HHPHPAF-SRVTRVEL---------DDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVK 1356
               HPAF  ++TRV L         D   D+ L E GV Y I  APFEF+YSYTETPKVK
Sbjct: 113  ---HPAFLPKITRVPLPRNNAKPPIDRKADIKLSEDGVSYVIDGAPFEFKYSYTETPKVK 169

Query: 1355 PLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFL 1176
            PL LREAPY+PFGP TMPRPWTGRAP P SKKKL EFDSF LPPP KKGVKPVQAPGPFL
Sbjct: 170  PLKLREAPYAPFGPITMPRPWTGRAPLPPSKKKLREFDSFVLPPPDKKGVKPVQAPGPFL 229

Query: 1175 AGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRR 996
             G GP+Y ++R+EILG+PLT+EE++ LV GCL+++RQLNMGRDGLTHNMLDNIHAHWKRR
Sbjct: 230  PGAGPRYAKTREEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRR 289

Query: 995  RVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWK 816
            RVCKIKCKG CTVDM+NVCQQLEE+TGG IIY                      PLMLWK
Sbjct: 290  RVCKIKCKGVCTVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWK 349

Query: 815  PITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECEL 636
            P+TPVYPRL+Q+ PEGLT++EA  MR +G KL PICKLGKNGVY DLV++VREAFEECEL
Sbjct: 350  PVTPVYPRLIQRAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECEL 409

Query: 635  VRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVKE 456
            VRINCQGMNGSD+RKIGAKL+DLVPCVLISF  EHILMWRGRDWKS F K  N   E K 
Sbjct: 410  VRINCQGMNGSDFRKIGAKLRDLVPCVLISFECEHILMWRGRDWKSSFTKPVNDGDEAKN 469

Query: 455  FETESPTADPP 423
               +  T+  P
Sbjct: 470  SSIDGATSATP 480


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  595 bits (1534), Expect = e-167
 Identities = 310/521 (59%), Positives = 358/521 (68%), Gaps = 18/521 (3%)
 Frame = -3

Query: 1865 LMALKFTPPLTIFXXXXXXXXSLL--------TTDIRFSRWNNANAEKYINRERTQQQIE 1710
            +MALK   P  IF        +L          T+IRFSRWNNANAE++  R R QQ+IE
Sbjct: 6    IMALKLIIPFPIFSPPPNHNPNLNPNPPNHRPATEIRFSRWNNANAEEFNQRRRAQQEIE 65

Query: 1709 HEIRLHRRYQSASKIAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKP 1530
             +IR HRR+ SA+KI         T          FKS GTPSSPSRPSIPG++SKYSKP
Sbjct: 66   DDIRRHRRFDSATKITQSYDSSTSTATN----GVAFKSAGTPSSPSRPSIPGRKSKYSKP 121

Query: 1529 PKNSTNRHHHPHPAFSRVTRVELD----------DATDVVLGESGVGYRIPNAPFEFQYS 1380
              NS+      HPAF ++++ E              +++ + E G+ Y I  APFEF+YS
Sbjct: 122  ATNSSV----DHPAFRKISKREKTTNKSPEKPAASKSNISITEDGLSYVIDGAPFEFKYS 177

Query: 1379 YTETPKVKPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKP 1200
            YTE PK KPL LREA +SPFGP TM RPWTGRAP P SKKKL EFDSF+LPPP+KKGVKP
Sbjct: 178  YTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPPNKKGVKP 237

Query: 1199 VQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDN 1020
            VQ PGP+L G GP+YV +R+EILGEPLT EEV+ LV+   RS RQLNMGRDGLTHNMLDN
Sbjct: 238  VQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVESVKRSSRQLNMGRDGLTHNMLDN 297

Query: 1019 IHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXX 840
            IHAHWKRRR CKIKCKG CTVDM+NVC+QLEE+TGG IIY                    
Sbjct: 298  IHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRNYNYRNRP 357

Query: 839  XXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVR 660
              PLMLWKPITPVYPRL+QQ P+GLT+EEA EMRK+G KL PICKLGKNGVY DL K+VR
Sbjct: 358  HFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVR 417

Query: 659  EAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSE 480
            EAFE CELVRINCQGMNGSDYRKIGAKL+DLVPCVLISF  EHILMWRG++WKS   K  
Sbjct: 418  EAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSSILKPG 477

Query: 479  NGFSEVKEFETESPTADPPSFADSSSLRDQETSALCVQSGS 357
            N   + KE + +   +  P  A + S     T  L V+ GS
Sbjct: 478  NDSEDAKESKVDGSISVAPPTAGNGS-APSHTQMLLVEGGS 517


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  594 bits (1532), Expect = e-167
 Identities = 310/520 (59%), Positives = 357/520 (68%), Gaps = 18/520 (3%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXSLL--------TTDIRFSRWNNANAEKYINRERTQQQIEH 1707
            MALK   P  IF        +L          T+IRFSRWNNANAE++  R R QQ+IE 
Sbjct: 1    MALKLIIPFPIFSPPPNHNPNLNPNPPNHRPATEIRFSRWNNANAEEFNQRRRAQQEIED 60

Query: 1706 EIRLHRRYQSASKIAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPP 1527
            +IR HRR+ SA+KI         T          FKS GTPSSPSRPSIPG++SKYSKP 
Sbjct: 61   DIRRHRRFDSATKITQSYDSSTSTATN----GVAFKSAGTPSSPSRPSIPGRKSKYSKPA 116

Query: 1526 KNSTNRHHHPHPAFSRVTRVELD----------DATDVVLGESGVGYRIPNAPFEFQYSY 1377
             NS+      HPAF ++++ E              +++ + E G+ Y I  APFEF+YSY
Sbjct: 117  TNSSV----DHPAFRKISKREKTTNKSPEKPAASKSNISITEDGLSYVIDGAPFEFKYSY 172

Query: 1376 TETPKVKPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPV 1197
            TE PK KPL LREA +SPFGP TM RPWTGRAP P SKKKL EFDSF+LPPP+KKGVKPV
Sbjct: 173  TEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPPNKKGVKPV 232

Query: 1196 QAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNI 1017
            Q PGP+L G GP+YV +R+EILGEPLT EEV+ LV+   RS RQLNMGRDGLTHNMLDNI
Sbjct: 233  QKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVESVKRSSRQLNMGRDGLTHNMLDNI 292

Query: 1016 HAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXX 837
            HAHWKRRR CKIKCKG CTVDM+NVC+QLEE+TGG IIY                     
Sbjct: 293  HAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRNYNYRNRPH 352

Query: 836  XPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVRE 657
             PLMLWKPITPVYPRL+QQ P+GLT+EEA EMRK+G KL PICKLGKNGVY DL K+VRE
Sbjct: 353  FPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVRE 412

Query: 656  AFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSEN 477
            AFE CELVRINCQGMNGSDYRKIGAKL+DLVPCVLISF  EHILMWRG++WKS   K  N
Sbjct: 413  AFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSSILKPGN 472

Query: 476  GFSEVKEFETESPTADPPSFADSSSLRDQETSALCVQSGS 357
               + KE + +   +  P  A + S     T  L V+ GS
Sbjct: 473  DSEDAKESKVDGSISVAPPTAGNGS-APSHTQMLLVEGGS 511


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  592 bits (1527), Expect = e-166
 Identities = 306/553 (55%), Positives = 379/553 (68%), Gaps = 5/553 (0%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            +DI FSRWNNANA ++ +R R Q++IE +IR +RR+ SA+ I       +  ++   +  
Sbjct: 32   SDIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNSAANI------IDNYDSATSNEN 85

Query: 1610 PIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRVEL-----DDATD 1446
               KSIGTPSSPS PSIPG++SKYSKP   S   HH    + S++T+  L     D   D
Sbjct: 86   FKSKSIGTPSSPSAPSIPGRKSKYSKP--ESPTSHHPAFRSISKITKKPLPEKPIDRNAD 143

Query: 1445 VVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPHPTS 1266
            V L E G+ + +  APFEF+YSYTETPK KP+ LREAP+SPFGP TM RPWTGRAP P S
Sbjct: 144  VKLSEDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPS 203

Query: 1265 KKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLVQG 1086
            KKKL EFDSFKLPPP KKGVKPVQ PGPFL G GP+YV SR+EILGEPLT EEVK+L++G
Sbjct: 204  KKKLREFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEG 263

Query: 1085 CLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGGNI 906
            CL++RRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKC G CTVDM+NVCQQLEE+TGG +
Sbjct: 264  CLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKV 323

Query: 905  IYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKRGH 726
            IY                      PLMLWKP+TPVYPRL+++ PEGLT+EEA EMR++G 
Sbjct: 324  IYRKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGR 383

Query: 725  KLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLIS 546
            KL PICKL KNGVY +LVK VREAFEECELVRI+CQG+NGSDYRK+GAKLK+LVPC+LIS
Sbjct: 384  KLIPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLIS 443

Query: 545  FAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQETSALCVQ 366
            F HEHILMWRGRDWKS   K  N   E    +  S T      + +S L DQ    + + 
Sbjct: 444  FEHEHILMWRGRDWKSSMIKPVNDSVEAIGSDVNSAT------SIASVLEDQ---IMEIV 494

Query: 365  SGSGGVACAEMHNLIISTSGNEHSEETNDISDSAKEDQTSNSSTLGVYASSSTGSVQSSK 186
            S   G++  +M  + + +           + + A+     + +++ + ASS+T  +    
Sbjct: 495  SHEDGLSKPDMSTIPVGS-----------MDEQAEHPSILDGTSVAIGASSTTVEMSEIN 543

Query: 185  PGSVNSLAFQVQE 147
            P + +  +  V E
Sbjct: 544  PMTESGSSSAVSE 556


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  590 bits (1521), Expect = e-166
 Identities = 313/517 (60%), Positives = 361/517 (69%), Gaps = 13/517 (2%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXS---LLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLH 1692
            MALK   P  IF        +      T+IRFSRW NANAEK+  R R+QQ+IE EIR  
Sbjct: 1    MALKLPFPFPIFTPQFNPNSTPSHRTLTEIRFSRWYNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 1691 RRYQSASKIAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTN 1512
            RR+ SA+KI       +  ++ ID  E  F+S+GTPSSPSRPSIPG++SKYSK P   + 
Sbjct: 61   RRFSSAAKIVDLCDS-DSPSSAIDRNET-FRSVGTPSSPSRPSIPGRKSKYSKNPNPDS- 117

Query: 1511 RHHHPHPAFSRVTRVE----------LDDATDVVLGESGVGYRIPNAPFEFQYSYTETPK 1362
                P P F +V++ +          +    +V L E GV Y I  APFEF+YSYTETPK
Sbjct: 118  ----PSP-FRQVSKTKKTMNAPEERHIGVEANVSLSEDGVSYVIDGAPFEFKYSYTETPK 172

Query: 1361 VKPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGP 1182
            VKP+ LRE PY+PFGP TM RPWTGRAP P SKKKLPEFDSF+LPP +KKGVKPVQAPGP
Sbjct: 173  VKPIKLRE-PYAPFGPTTMSRPWTGRAPLPPSKKKLPEFDSFQLPPKNKKGVKPVQAPGP 231

Query: 1181 FLAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWK 1002
            FLAG GPKYV SR+EILGEPLT+EE+K L++GC+ S RQLN+GRDGLTHNML+NIHA WK
Sbjct: 232  FLAGSGPKYVMSREEILGEPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWK 291

Query: 1001 RRRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLML 822
            RRRVCKIKCKG CTVDM+NV QQLEE+TGG IIY                      PLML
Sbjct: 292  RRRVCKIKCKGVCTVDMDNVKQQLEERTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLML 351

Query: 821  WKPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEEC 642
            WKP  PVYPRLV+  P+GLT+EE  EMRK+G KL PICKLGKNGVYS LVKHVREAFEEC
Sbjct: 352  WKPAAPVYPRLVKHIPDGLTLEEVTEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEEC 411

Query: 641  ELVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEV 462
            ELVRINCQG+NGSD+RKIGAKLKDLVPCVLISF  EHIL+WRGRDWKS  P  E      
Sbjct: 412  ELVRINCQGLNGSDFRKIGAKLKDLVPCVLISFESEHILLWRGRDWKSSLPYIERNPEGA 471

Query: 461  KEFETESPTADPPSFADSSSLRDQETSALCVQSGSGG 351
            K   T+  T   PS     S+++  TS       +GG
Sbjct: 472  KAHGTDETTIVAPSIEQDVSVKNTLTSLDSEDLSTGG 508


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  588 bits (1515), Expect = e-165
 Identities = 314/562 (55%), Positives = 371/562 (66%), Gaps = 26/562 (4%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            T+IRFSRWNNANAEK+I  ERTQ++IE EIR H+R+ S   IA         N     P 
Sbjct: 25   TEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLNIA--------NNYNPAPPS 76

Query: 1610 PI----FKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRV-----ELD 1458
            P+    FKS+GTPS+PS PSIPGK+SKYS+   N  N     HPAF  + R      E  
Sbjct: 77   PVTEKTFKSVGTPSTPSSPSIPGKKSKYSR---NFQNNPRQIHPAFKPLVRTRKIPDETA 133

Query: 1457 DAT------DVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRP 1296
            D T      D+ + E+GV Y  P APF +QYSYTETPK+KP  LRE   SPFGPE+M RP
Sbjct: 134  DETARKSAIDIKVDENGVCYEFPEAPFVYQYSYTETPKLKPKKLREPLVSPFGPESMQRP 193

Query: 1295 WTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLT 1116
            WTGR P P SKKK PEFDSF+LPPPHKKGVKPVQAPGPFLAG GPKYV+SR+E+LGEPLT
Sbjct: 194  WTGRKPLPPSKKKRPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGEPLT 253

Query: 1115 EEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQ 936
            +EE+  L+  C ++ RQ+N+GRDGLTHNML+NIHAHWKR+RVCKIKCKG CTVDM+NVC+
Sbjct: 254  KEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNVCE 313

Query: 935  QLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIE 756
            +LEEKTGG IIY                      PLMLW+P+TPVYPRLVQ+ PEGLT+E
Sbjct: 314  KLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQRVPEGLTLE 373

Query: 755  EAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKL 576
            EA  MRK+G  L PICKL KNGVY DLVK+VREAFE CELV INCQG+N SDYRKIGAKL
Sbjct: 374  EATLMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPSDYRKIGAKL 433

Query: 575  KDLVPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLR 396
            KDLVPCVLISF  EHILMWRGRDW S  P+                  D  S   +++ R
Sbjct: 434  KDLVPCVLISFEQEHILMWRGRDWVSSLPEDR----------------DNDSDKAANTNR 477

Query: 395  DQETSALCVQSGSGGVACAEMHNLIISTS----GNEHSEETNDISDSAKED-------QT 249
              E   +   SGS  +   EM+   +S +    G E SE      D  KED       ++
Sbjct: 478  SLEVQVVASTSGSPRLPITEMNTCNLSANTFPLGEEESEYVR--RDGTKEDRSEDHYLES 535

Query: 248  SNSSTLGVYASSSTGSVQSSKP 183
            SN + L V + ++TG  +S  P
Sbjct: 536  SNKAPLDVCSVTTTGISESEIP 557


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  585 bits (1508), Expect = e-164
 Identities = 309/538 (57%), Positives = 372/538 (69%), Gaps = 22/538 (4%)
 Frame = -3

Query: 1790 TDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASKIAAPAHHFEETNNKIDDPE 1611
            T+IRFSRWNNANAEK+I  ERTQ++IE EIR H+R+ S   IA         N     P 
Sbjct: 25   TEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFDSVLSIA--------NNYNPAPPS 76

Query: 1610 PI----FKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHP---HPAFSRVTR-----V 1467
            P+    FKS GTPS+PS PSIPGK+SKYS+      N H++P   HPAF  + R     V
Sbjct: 77   PVAEKTFKSTGTPSTPSSPSIPGKKSKYSR------NFHNNPRQIHPAFKPLVRTRKIPV 130

Query: 1466 ELDDAT------DVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETM 1305
            E  D T      D+ + E+GV Y  P APF +QYSYTETPKVKP  LRE   SPFGPE+M
Sbjct: 131  ETPDETAGKSDIDIKVDENGVCYEFPEAPFVYQYSYTETPKVKPRKLREPLVSPFGPESM 190

Query: 1304 PRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGE 1125
             RPWTGR P P SKKKLPEFDSF+LPPPHKKGVKPVQAPGPFLAG GPKYV+SR+E+LGE
Sbjct: 191  QRPWTGRKPLPPSKKKLPEFDSFQLPPPHKKGVKPVQAPGPFLAGSGPKYVKSREEVLGE 250

Query: 1124 PLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMEN 945
            PLT+EE+  L+  C ++ RQ+N+GRDGLTHNML+NIHAHWKR+RVCKIKCKG CTVDM+N
Sbjct: 251  PLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDN 310

Query: 944  VCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGL 765
            VC++LEEKTGG IIY                      PLMLW+P+TPVYPRLV++ PEGL
Sbjct: 311  VCEKLEEKTGGKIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVRRVPEGL 370

Query: 764  TIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIG 585
            T+EEA EMRK+G  L PICKL KNGVY DLVK+VREAFE CELV INCQG+N SDYRKIG
Sbjct: 371  TLEEATEMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPSDYRKIG 430

Query: 584  AKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTADPPSFADSS 405
            AKLKDLVPCVLISF  EHIL+WRGRDW S  P+  +   E++E  +ES  A       ++
Sbjct: 431  AKLKDLVPCVLISFEQEHILIWRGRDWVSSLPEDGDN-PEIRE-GSESVNA-------AN 481

Query: 404  SLRDQETSALCVQSGSGGVACAEMHNLIISTS----GNEHSEETNDISDSAKEDQTSN 243
            + R  E   +   +GS  +   E++   +S +    G+E +E      D  KED++ +
Sbjct: 482  TNRSFEVQVVASTAGSSSLPVTEVNTYNLSANTFPLGDEDAEYVR--KDGTKEDRSED 537


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
            lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
            ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  544 bits (1402), Expect = e-152
 Identities = 290/546 (53%), Positives = 362/546 (66%), Gaps = 8/546 (1%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXS-LLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRR 1686
            M+LK   P  IF        +    ++IRFSRW NANAE++  R R+Q+++E EIR  RR
Sbjct: 1    MSLKLNTPFPIFAPSLFPNHNPRAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRR 60

Query: 1685 YQSASKIAAPAHHFEETNNKIDDPEPI-FKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNR 1509
            + +A+KI     H  ++     +P+   F+S GTPS PS  SIPG+RSKYSKP       
Sbjct: 61   FDAATKIV----HTHDSEAAASEPKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNKP 116

Query: 1508 HHHPHPAFSRVTRVELDDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPY 1329
             + P    S     +LD   +V L E G+ Y I  APFEF+YSYTETPKVKPL LRE  Y
Sbjct: 117  KNKPRVPDSPP---QLDAKPEVKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAY 173

Query: 1328 SPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQ 1149
            +PFGP TM RPWTGRAP P S+K   EFDSF+LPP  KKGVKPVQ PGPF  G+GP+YV 
Sbjct: 174  APFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPDGKKGVKPVQKPGPFRPGLGPRYVY 233

Query: 1148 SRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 969
            +++EILGEPLT+EE++ LV  CL++ RQLNMGRDGLTHNML+NIH  WKRRRVCKIKCKG
Sbjct: 234  TKEEILGEPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKG 293

Query: 968  ACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRL 789
             CTVDM+ VC+QLEEK GG +IY                      PLMLWKP+ PVYPRL
Sbjct: 294  VCTVDMDKVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRL 353

Query: 788  VQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMN 609
            +QQ PEGLT++EA EMR++G +L PICKLGKNGVY DLVK+V+EAFE CELVRI+CQGM 
Sbjct: 354  IQQVPEGLTLQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMK 413

Query: 608  GSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKS--LFPKSENGFSEVKEFETESPT 435
            GSD+RKIGAKLKDLVPCVLISF +E IL+WRGR+WKS    P  ++   E  E +   P 
Sbjct: 414  GSDFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTIPDKKDDILEDIEVDAALPE 473

Query: 434  ADPPSFADSSS---LRDQETSALCVQSGSGGVACAEMHNLIISTSGNEHSEET-NDISDS 267
             D  S + + +    ++    ++ +Q+  GG      H+L  ST      E+T N +   
Sbjct: 474  DDEASVSPNQTQTVTQNPPLDSMELQNDPGG------HDLSPSTVDFSAMEDTSNSLQSP 527

Query: 266  AKEDQT 249
            + +D T
Sbjct: 528  STKDLT 533


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  543 bits (1399), Expect = e-151
 Identities = 292/546 (53%), Positives = 361/546 (66%), Gaps = 8/546 (1%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXS-LLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRR 1686
            M+LK   P  IF        +    ++IRFSRW NANAE++  R R+Q+++E EIR  RR
Sbjct: 1    MSLKLNTPFPIFAPSLFPNHNPRAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRR 60

Query: 1685 YQSASKIAAPAHHFEETNNKIDDPEPI-FKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNR 1509
            + +A+KI     H  ++     +P+   F+S GTPS PS  SIPG+RSKYSKP       
Sbjct: 61   FDAATKIV----HTHDSEAAAAEPKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNRP 116

Query: 1508 HHHPHPAFSRVTRVELDDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPY 1329
             + P    S     +LD   +V L E G+ Y I  APFEF+YSYTETPKVKPL LRE  Y
Sbjct: 117  KNKPRVPDSPP---QLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAY 173

Query: 1328 SPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQ 1149
            +PFGP TM RPWTGRAP P S+K   EFDSF+LPP  KKG+KPVQ PGPF  G+GP+YV 
Sbjct: 174  APFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVY 233

Query: 1148 SRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 969
            S++EILGEPLT+EEV+ LV  CL++ RQLNMGRDGLTHNML+NIH  WKRRRVCKIKCKG
Sbjct: 234  SKEEILGEPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKG 293

Query: 968  ACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRL 789
             CTVDM+NVC+QLEEK GG +IY                      PLMLWKP+ PVYPRL
Sbjct: 294  VCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRL 353

Query: 788  VQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMN 609
            +QQ PEGLT +EA  MR++G +L PICKLGKNGVY DLVK+V+EAFE CELVRI+CQGM 
Sbjct: 354  IQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMK 413

Query: 608  GSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLF--PKSENGFSEVKEFETESPT 435
            GSD+RKIGAKLKDLVPCVL+SF +E IL+WRGR+WKS    P  +    E  E +T  P 
Sbjct: 414  GSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPE 473

Query: 434  ADPPSFADSSS---LRDQETSALCVQSGSGGVACAEMHNLIISTSGNEHSEET-NDISDS 267
             D PS + + S    ++    ++ +Q+   G      H+L  ST  +   E T N +   
Sbjct: 474  DDEPSVSPNQSQTMTQNPPLDSMELQNDPDG------HDLSPSTVDSSEMEGTINSLQSW 527

Query: 266  AKEDQT 249
            + +D T
Sbjct: 528  STKDVT 533


>ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutrema salsugineum]
            gi|557110072|gb|ESQ50369.1| hypothetical protein
            EUTSA_v10001924mg [Eutrema salsugineum]
          Length = 678

 Score =  543 bits (1398), Expect = e-151
 Identities = 288/557 (51%), Positives = 358/557 (64%), Gaps = 13/557 (2%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXSLLTT-DIRFSRWNNANAEKYINRERTQQQIEHEIRLHRR 1686
            M+LK   P  IF        +     +IRFSRW NANAE++  R R+Q+++E EIR  RR
Sbjct: 1    MSLKLNTPFPIFAPSLFPNPNPRGPGEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRR 60

Query: 1685 YQSASKIAAPAHHFEETNNKIDDPEPI-FKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNR 1509
            + +A+ I     H  ++     +P+   F+S GTPS PS  SIPG+RSKYSKP    T  
Sbjct: 61   FDAATSIV----HTHDSAAAASEPKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPTKP 116

Query: 1508 HHHPHPAFSRVTRVELDDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPY 1329
             + P    S     +LD   +V L E G+ Y I  APFEF+YSYTETPKVKPL LRE  Y
Sbjct: 117  KNKPKVPDSPP---QLDAKPEVKLSEDGLSYVIDGAPFEFKYSYTETPKVKPLKLREPAY 173

Query: 1328 SPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQ 1149
            +PFGP TM RPWTGRAP P S+K   EFDSF+LPP  KKGVKP+Q PGPF  G+GP+YV 
Sbjct: 174  APFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGVKPIQKPGPFRPGVGPRYVY 233

Query: 1148 SRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 969
            +++EILGEPLT+EE++ LV  CL++ RQLNMGRDGLTHNML+NIH  WKRRRVCKIKCKG
Sbjct: 234  TKEEILGEPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKG 293

Query: 968  ACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRL 789
             CTVDM+NVC+QLEEK GG +IY                      PLMLWKP+ PVYPRL
Sbjct: 294  VCTVDMDNVCEQLEEKIGGKVIYRRGGVIFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRL 353

Query: 788  VQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMN 609
            +QQ PEGLT +EA EMR++G +L PICKLGKNGVY DLVK+V+EAFE CELVRI+CQGM 
Sbjct: 354  IQQVPEGLTRQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMK 413

Query: 608  GSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLFPKSENGFSEVKEFETESPTAD 429
            GSD+RKIGAKLKDLVPCVLISF +E IL+WRGR+WKS     +     + + E +  TA 
Sbjct: 414  GSDFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTTPDKKDDILGDIEVD--TAL 471

Query: 428  PPSFADSSSLRDQETSALCVQSGSGG-----------VACAEMHNLIISTSGNEHSEETN 282
            P    D +S    +T  +   S  G            +   E  N  + +S  E      
Sbjct: 472  PEGDDDEASESPNQTQVVTQNSPLGSKELQNDQSAVDILAMEGRNSSLQSSSTERDNSLG 531

Query: 281  DISDSAKEDQTSNSSTL 231
            D  +  +E +  N+ ++
Sbjct: 532  DHQEPEEESEEINTQSI 548


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
            gi|482565819|gb|EOA30008.1| hypothetical protein
            CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score =  540 bits (1390), Expect = e-150
 Identities = 296/584 (50%), Positives = 365/584 (62%), Gaps = 3/584 (0%)
 Frame = -3

Query: 1862 MALKFTPPLTIFXXXXXXXXS-LLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRR 1686
            M+LK   P  IF        +    ++IRFSRW NANAE++  R R+Q+++E EIR  RR
Sbjct: 1    MSLKLNTPFPIFAPSLFPNPNPRAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRR 60

Query: 1685 YQSASKIAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRH 1506
            + +A+KI    H  +      +     F+S GTPS PS  SIPG+RSKYSKP        
Sbjct: 61   FDAATKIV---HTHDSDAAASESKTSPFRSRGTPSLPSARSIPGRRSKYSKPDSGPNKPK 117

Query: 1505 HHPHPAFSRVTRVELDDATDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYS 1326
            + P    S     +LD   +V L E G+ Y I  APFEF+YSYTETPKVKPL LRE  Y+
Sbjct: 118  NKPRVPDSPP---QLDAKAEVKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREPAYA 174

Query: 1325 PFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQS 1146
            PFGP TM RPWTGRAP P S+K   +FDSF+LPP  KKGVKPVQ PGPF  G+GP+YV +
Sbjct: 175  PFGPTTMGRPWTGRAPLPQSQKTPRDFDSFRLPPVGKKGVKPVQKPGPFRPGIGPRYVYT 234

Query: 1145 RDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGA 966
            ++EILGEPLT+EE++ LV  CL++ RQLNMGRDGLTHNML+NIH  WKRRRVCKIKCKG 
Sbjct: 235  KEEILGEPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGV 294

Query: 965  CTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLV 786
            CTVDM+N+C+QLEEK GG +IY                      PLMLWKP+ PVYP+L+
Sbjct: 295  CTVDMDNICEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPKLI 354

Query: 785  QQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNG 606
            QQ PEGLT  EA EMR++G +L PICKLGKNGVY DLVK+V+EAFE CELVRI+CQG+  
Sbjct: 355  QQVPEGLTRLEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGLKA 414

Query: 605  SDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDWKSLF--PKSENGFSEVKEFETESPTA 432
            SD+RKIGAKLKDLVPCVLISF +E IL+WRGR+WKS    P  ++ +    E +T  P  
Sbjct: 415  SDFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTTPDKKDDYLRDIEVDTALPED 474

Query: 431  DPPSFADSSSLRDQETSALCVQSGSGGVACAEMHNLIISTSGNEHSEETNDISDSAKEDQ 252
            D PS  D      Q +    ++S +      + H+L  ST      E T+    S   D 
Sbjct: 475  DEPSSPDQPQTVIQNSPLGSMESQNN----PDGHDLSPSTVDFLAMEGTSSSLRSLSTDV 530

Query: 251  TSNSSTLGVYASSSTGSVQSSKPGSVNSLAFQVQEKYSALHAQN 120
            T       + A SS G  Q  +P    S     Q     L+  N
Sbjct: 531  TE------LTADSSLGDDQEPEPEPEKSEEISKQSIERVLNLMN 568


>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
            gi|548857270|gb|ERN15076.1| hypothetical protein
            AMTR_s00056p00043140 [Amborella trichopoda]
          Length = 977

 Score =  536 bits (1380), Expect = e-149
 Identities = 280/484 (57%), Positives = 329/484 (67%), Gaps = 9/484 (1%)
 Frame = -3

Query: 1631 NKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRVELDDA 1452
            N+I +P    +S  +   P  P+    R+   KP ++        H +FSR +       
Sbjct: 252  NEISNPRKDTRSSSSKKDPQHPAFRPIRAY--KPLRS--------HGSFSRNSE---KSE 298

Query: 1451 TDVVLGESGVGYRIPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPHP 1272
            T   +GE GV Y++ NAPFEFQYSYTETPKVKPLALRE P+ PFGP TMPRPWTGRAP P
Sbjct: 299  TGFSVGEHGVSYKLVNAPFEFQYSYTETPKVKPLALREPPFMPFGPSTMPRPWTGRAPLP 358

Query: 1271 TSKKKLPEFDSFKLPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLV 1092
             SKKKLPEFDSFKLPPPHKKGVKPVQAPGP+L G GP+YV+SR+EILGEPLT EEV  L+
Sbjct: 359  PSKKKLPEFDSFKLPPPHKKGVKPVQAPGPYLPGTGPRYVKSREEILGEPLTTEEVNSLI 418

Query: 1091 QGCLRSRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGG 912
            + CL+S+RQLNMGRDGLTHNMLDNIHAHWKR R CKIKCKG CTVDM+NVC+QLEEKTGG
Sbjct: 419  RTCLKSKRQLNMGRDGLTHNMLDNIHAHWKRLRACKIKCKGVCTVDMDNVCEQLEEKTGG 478

Query: 911  NIIYXXXXXXXXXXXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKR 732
             IIY                      PLMLW+PITPVYPRL+   PEGLT+EEA+EMRK+
Sbjct: 479  KIIYRRGGVLYLFRGRNYNYRLRPRFPLMLWRPITPVYPRLIPLVPEGLTLEEAKEMRKK 538

Query: 731  GHKLPPICKLGKNGVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVL 552
            G K+PPICKL KNGVY DLVK+V+EAFEECELVRINCQG+N SDY+KIGAKLKD+VPCVL
Sbjct: 539  GRKVPPICKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNASDYKKIGAKLKDIVPCVL 598

Query: 551  ISFAHEHILMWRGRDWKSLFPKSENGFS--EVKEFETESPTADPPSF------ADSSSLR 396
            ISF +EHILMWRGRDW S   K EN     E+ E  +E+   DP           SS+L 
Sbjct: 599  ISFENEHILMWRGRDWTSSPSKLENDSETLEIAEVSSETGAPDPQILPISNPDTSSSALD 658

Query: 395  DQETSALCVQSGSGGVACAEMHNL-IISTSGNEHSEETNDISDSAKEDQTSNSSTLGVYA 219
             ++ S    Q       C E +N+ ++  S N  +EET        +D  + SS  G   
Sbjct: 659  TEKCSTTSSQPNQVDSNCIEPNNISMLKVSNNMLTEETEVGPTPTFQDALAISSECGANC 718

Query: 218  SSST 207
            S  T
Sbjct: 719  SEIT 722



 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 51/108 (47%), Positives = 68/108 (62%)
 Frame = -3

Query: 1847 TPPLTIFXXXXXXXXSLLTTDIRFSRWNNANAEKYINRERTQQQIEHEIRLHRRYQSASK 1668
            TP  T F        +L  T +  SRWNNANA+++I  ER+QQ++E  +R  ++ Q A  
Sbjct: 24   TPARTHFPSPPEPARTLTLTHL--SRWNNANAQRFIRHERSQQELEALLRQSKKDQLAEN 81

Query: 1667 IAAPAHHFEETNNKIDDPEPIFKSIGTPSSPSRPSIPGKRSKYSKPPK 1524
            ++     F+   N   DP PIF+S GTPSSPSRPSIPGK+SKYS+P K
Sbjct: 82   LSDVP--FDGNPN---DPNPIFRSSGTPSSPSRPSIPGKKSKYSRPEK 124


>ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine max]
          Length = 723

 Score =  507 bits (1306), Expect = e-141
 Identities = 261/455 (57%), Positives = 319/455 (70%), Gaps = 6/455 (1%)
 Frame = -3

Query: 1571 RPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRVELDDAT----DVVLGESGVGYRIPN 1404
            RP+ P KRSK    PK   +R  HP   FS + + +    +    +V + + G+ Y I  
Sbjct: 49   RPTGPAKRSKSPARPK--VDRQSHPAFRFSNIPKSKPQRVSGAPENVKISDDGLSYVIDG 106

Query: 1403 APFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFKLPP 1224
            APFEF+YSYTETPKVKP+ +REAP+ PFGP+TMPRPWTGRAP P SKKKL EFDSF LPP
Sbjct: 107  APFEFKYSYTETPKVKPIKMREAPFVPFGPDTMPRPWTGRAPLPASKKKLKEFDSFVLPP 166

Query: 1223 PHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMGRDG 1044
            PHKKGVKPVQ+PGP+LAG GP+YV+SR+EILGEPLT+EE++ LV+ C++++RQLN+GRDG
Sbjct: 167  PHKKGVKPVQSPGPYLAGTGPRYVKSREEILGEPLTQEEIRDLVKSCMKAQRQLNIGRDG 226

Query: 1043 LTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXXXXX 864
            LTHNMLDNIHAHWKRRR CKI+CKG CTVDM+NVC QLEE+TGG II+            
Sbjct: 227  LTHNMLDNIHAHWKRRRACKIRCKGVCTVDMDNVCHQLEERTGGKIIHRKGGVLYLFRGR 286

Query: 863  XXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKNGVY 684
                      PLMLWKP+ PVYPRLVQ+ PEGLT+EEA +MR++G  L PICKLGKNGVY
Sbjct: 287  NYNYKTRPHFPLMLWKPVPPVYPRLVQRVPEGLTLEEATKMRQKGSTLIPICKLGKNGVY 346

Query: 683  SDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRGRDW 504
             DLVK VREAFEECELVRINCQG+N SDYRKIGAKL+DLVPC L+SF +EHILMWRG +W
Sbjct: 347  CDLVKTVREAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSFEYEHILMWRGPNW 406

Query: 503  KSLFPKSENGFSEVKEFETESPTADP-PSFADSSSLRDQETSALCVQSGSGGVACAEMHN 327
            KS  P   +   E K+ E +     P PS A   S    + + L  +S           N
Sbjct: 407  KSSIPDRGDDRKESKQIEVDHKNYKPLPSEALEFSAPSLQMNPLEHES-----------N 455

Query: 326  LIISTS-GNEHSEETNDISDSAKEDQTSNSSTLGV 225
            L+  TS  +  S+ T D  + +  ++ S+ S  GV
Sbjct: 456  LLHDTSISSISSDVTLDKVEVSYPNENSHQSMSGV 490


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  493 bits (1269), Expect = e-136
 Identities = 261/490 (53%), Positives = 318/490 (64%), Gaps = 9/490 (1%)
 Frame = -3

Query: 1580 SPSRPSIPGKRSKYSKPPKNSTNRHHHPHPAFSRVTRVELDDAT----DVVLGESGVGYR 1413
            S  RP+  GK +K   P K   +   HP   FS + + +L        +V + E GV Y 
Sbjct: 19   SSRRPT--GKPNK--NPSKPKVDPQSHPALKFSNIPKQKLKPVNKTPENVKISEDGVSYV 74

Query: 1412 IPNAPFEFQYSYTETPKVKPLALREAPYSPFGPETMPRPWTGRAPHPTSKKKLPEFDSFK 1233
            I  APFEF+YSYTETPK KP+ +RE P+ PFGP TMPRPWTGR P P SKKKL EFDSF 
Sbjct: 75   IEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFV 134

Query: 1232 LPPPHKKGVKPVQAPGPFLAGMGPKYVQSRDEILGEPLTEEEVKVLVQGCLRSRRQLNMG 1053
            LPPPHKKGVKPVQ+PGPFL G  P+YV SR+E+LGEPLT+EE+  LV+  L+S RQLN+G
Sbjct: 135  LPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLG 194

Query: 1052 RDGLTHNMLDNIHAHWKRRRVCKIKCKGACTVDMENVCQQLEEKTGGNIIYXXXXXXXXX 873
            RDG  HNMLDNIHAHWKRRRVCKIKC G CTVDM+NVCQQLEEKTGG +IY         
Sbjct: 195  RDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLF 254

Query: 872  XXXXXXXXXXXXXPLMLWKPITPVYPRLVQQTPEGLTIEEAREMRKRGHKLPPICKLGKN 693
                         PLMLWKP+ PVYPRL+QQ PEGLT+EEA EMR++G  L PICKLGKN
Sbjct: 255  RGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKN 314

Query: 692  GVYSDLVKHVREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLISFAHEHILMWRG 513
            GVY +LV +VREAFEECELVR+NCQG+N SDYRKIGAKL+DLVPC L+S+ +EHILMWRG
Sbjct: 315  GVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRG 374

Query: 512  RDWKSLFPKSENGFSEVKEFETESPTADPPSFADSSSLRDQETSALCVQSGSGGVACAEM 333
            R+WKS FP     F E  + +           AD+ + +  ++ AL V + S        
Sbjct: 375  RNWKSSFPDLVEDFKEATKAD-----------ADNKNDKTLQSEALDVSTPSLN------ 417

Query: 332  HNLIISTSGNEHSEETNDISDSAKEDQ----TSNS-STLGVYASSSTGSVQSSKPGSVNS 168
            HN +   S   H    +   D    D+    T NS  ++ V A +S   V  ++  +V +
Sbjct: 418  HNPVEHVSNLSHDTSISFCPDDVTVDKVPCPTKNSKQSMSVVADASLTKVYEAETTNVAT 477

Query: 167  LAFQVQEKYS 138
             ++   E  S
Sbjct: 478  DSYGEPESCS 487