BLASTX nr result

ID: Cocculus23_contig00000727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00000727
         (516 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007149070.1| hypothetical protein PHAVU_005G038500g [Phas...    59   9e-07

>ref|XP_007149070.1| hypothetical protein PHAVU_005G038500g [Phaseolus vulgaris]
           gi|561022334|gb|ESW21064.1| hypothetical protein
           PHAVU_005G038500g [Phaseolus vulgaris]
          Length = 63

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
 Frame = -1

Query: 420 MSFFSNFFSCF----ADSKRVSCENAACHSKSSQFREELKKEKPKRSSAPIPMSYFPIGS 253
           MSFFS+FF+CF    + S RVS     C SK+    ++ KK K K   API MSYFP+ S
Sbjct: 1   MSFFSSFFNCFVPSSSSSMRVSDVEDGCESKAPSSEKQKKKSKSK--GAPIVMSYFPMNS 58

Query: 252 SLSRL 238
           SLSRL
Sbjct: 59  SLSRL 63


Top