BLASTX nr result
ID: Cocculus23_contig00000612
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cocculus23_contig00000612 (467 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera] 62 1e-07 ref|XP_006386314.1| hypothetical protein POPTR_0002s070802g, par... 55 8e-06 >emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera] Length = 358 Score = 61.6 bits (148), Expect = 1e-07 Identities = 57/129 (44%), Positives = 60/129 (46%), Gaps = 2/129 (1%) Frame = -1 Query: 389 VVVVVTCTCSAP*VVEEGTCICKLDAPWVVVVVICICSAPWEVAEETCICSVPWEVVEET 210 VVV TCTC VV G C CK VV V IC C V C C + EVVE T Sbjct: 24 VVVEETCTCKLEEVVA-GICTCK-----VVGVGICTCKL---VVVGXCTCKLVEEVVE-T 73 Query: 209 CIHSAPWVVVVATCTCSAPWVEVAVICICSVPWEVVVETCTRSAP*VVVEVETCTHSAPW 30 C VVVV TCTC VE CIC V VVV CT VV E TC Sbjct: 74 CTCK---VVVVETCTCKVVVVET---CICKVVM-VVVGXCTCKLVGVVAETYTCKVVVVG 126 Query: 29 V--AVEEEI 9 V A+EEE+ Sbjct: 127 VESALEEEV 135 >ref|XP_006386314.1| hypothetical protein POPTR_0002s070802g, partial [Populus trichocarpa] gi|550344449|gb|ERP64111.1| hypothetical protein POPTR_0002s070802g, partial [Populus trichocarpa] Length = 209 Score = 55.5 bits (132), Expect = 8e-06 Identities = 62/173 (35%), Positives = 67/173 (38%), Gaps = 33/173 (19%) Frame = -1 Query: 467 EEVTC--------ICKLDVPXXXXXXXXXCNAPWVVVVVTCTCSAP*VVEEGTCICKLDA 312 E VTC CKL+V C WVV VVTC VVE TC A Sbjct: 32 EVVTCKLAVEEEGTCKLEV----VGETYTCRVSWVVGVVTCELVEV-VVETYTC----RA 82 Query: 311 PWVVVVVICICSAPWEVAEETCICSVPWEV--------VEETCIHSAPWVVV-------V 177 WVV VV C + EV ETC C + E ETC VVV V Sbjct: 83 SWVVGVVTCELA---EVVGETCTCKLAMEEGVENALEEAVETCTCKGALVVVENALEEVV 139 Query: 176 ATCTCSAPWVEVAVICICSVPWEVVVE----------TCTRSAP*VVVEVETC 48 TCTC V V C C VVVE TCT +VV+VE C Sbjct: 140 GTCTCKGALVVVVGTCTCKGALVVVVEENALVEEVVGTCTCKGV-LVVKVEAC 191