BLASTX nr result

ID: Cocculus23_contig00000612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00000612
         (467 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]    62   1e-07
ref|XP_006386314.1| hypothetical protein POPTR_0002s070802g, par...    55   8e-06

>emb|CAN78649.1| hypothetical protein VITISV_036363 [Vitis vinifera]
          Length = 358

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 57/129 (44%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
 Frame = -1

Query: 389 VVVVVTCTCSAP*VVEEGTCICKLDAPWVVVVVICICSAPWEVAEETCICSVPWEVVEET 210
           VVV  TCTC    VV  G C CK     VV V IC C     V    C C +  EVVE T
Sbjct: 24  VVVEETCTCKLEEVVA-GICTCK-----VVGVGICTCKL---VVVGXCTCKLVEEVVE-T 73

Query: 209 CIHSAPWVVVVATCTCSAPWVEVAVICICSVPWEVVVETCTRSAP*VVVEVETCTHSAPW 30
           C      VVVV TCTC    VE    CIC V   VVV  CT     VV E  TC      
Sbjct: 74  CTCK---VVVVETCTCKVVVVET---CICKVVM-VVVGXCTCKLVGVVAETYTCKVVVVG 126

Query: 29  V--AVEEEI 9
           V  A+EEE+
Sbjct: 127 VESALEEEV 135


>ref|XP_006386314.1| hypothetical protein POPTR_0002s070802g, partial [Populus
           trichocarpa] gi|550344449|gb|ERP64111.1| hypothetical
           protein POPTR_0002s070802g, partial [Populus
           trichocarpa]
          Length = 209

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 62/173 (35%), Positives = 67/173 (38%), Gaps = 33/173 (19%)
 Frame = -1

Query: 467 EEVTC--------ICKLDVPXXXXXXXXXCNAPWVVVVVTCTCSAP*VVEEGTCICKLDA 312
           E VTC         CKL+V          C   WVV VVTC      VVE  TC     A
Sbjct: 32  EVVTCKLAVEEEGTCKLEV----VGETYTCRVSWVVGVVTCELVEV-VVETYTC----RA 82

Query: 311 PWVVVVVICICSAPWEVAEETCICSVPWEV--------VEETCIHSAPWVVV-------V 177
            WVV VV C  +   EV  ETC C +  E           ETC      VVV       V
Sbjct: 83  SWVVGVVTCELA---EVVGETCTCKLAMEEGVENALEEAVETCTCKGALVVVENALEEVV 139

Query: 176 ATCTCSAPWVEVAVICICSVPWEVVVE----------TCTRSAP*VVVEVETC 48
            TCTC    V V   C C     VVVE          TCT     +VV+VE C
Sbjct: 140 GTCTCKGALVVVVGTCTCKGALVVVVEENALVEEVVGTCTCKGV-LVVKVEAC 191


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