BLASTX nr result
ID: Cocculus23_contig00000611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00000611
(255 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACG48503.1| 60S ribosomal protein L13a [Zea mays] 149 4e-34
ref|NP_001130808.1| uncharacterized protein LOC100191912 [Zea ma... 149 4e-34
gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| T... 149 4e-34
gb|EYU32659.1| hypothetical protein MIMGU_mgv1a013922mg [Mimulus... 149 5e-34
gb|EYU31410.1| hypothetical protein MIMGU_mgv1a013934mg [Mimulus... 149 5e-34
ref|XP_006855707.1| hypothetical protein AMTR_s00044p00144180 [A... 149 5e-34
ref|XP_004981725.1| PREDICTED: 60S ribosomal protein L13a-4-like... 149 5e-34
ref|XP_007223449.1| hypothetical protein PRUPE_ppa011551mg [Prun... 148 7e-34
ref|XP_007223448.1| hypothetical protein PRUPE_ppa011551mg [Prun... 148 7e-34
ref|XP_004154637.1| PREDICTED: 60S ribosomal protein L13a-4-like... 148 7e-34
ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like... 148 7e-34
ref|XP_004138959.1| PREDICTED: 60S ribosomal protein L13a-4-like... 148 7e-34
ref|XP_004133995.1| PREDICTED: 60S ribosomal protein L13a-2-like... 148 7e-34
ref|XP_002267491.1| PREDICTED: 60S ribosomal protein L13a-4 [Vit... 148 7e-34
ref|XP_002268901.1| PREDICTED: 60S ribosomal protein L13a-4 [Vit... 148 7e-34
ref|XP_004297119.1| PREDICTED: 60S ribosomal protein L13a-4-like... 148 9e-34
ref|XP_004288082.1| PREDICTED: 60S ribosomal protein L13a-4-like... 148 9e-34
pdb|3J61|O Chain O, Localization Of The Large Subunit Ribosomal ... 148 9e-34
gb|ADR71263.1| 60S ribosomal protein L13aA [Hevea brasiliensis] 148 9e-34
ref|XP_003559332.1| PREDICTED: 60S ribosomal protein L13a-4-like... 148 9e-34
>gb|ACG48503.1| 60S ribosomal protein L13a [Zea mays]
Length = 206
Score = 149 bits (376), Expect = 4e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGEAALARLKTYEGVPPP 116
>ref|NP_001130808.1| uncharacterized protein LOC100191912 [Zea mays]
gi|195606206|gb|ACG24933.1| 60S ribosomal protein L13a
[Zea mays]
Length = 206
Score = 149 bits (376), Expect = 4e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGEAALARLKTYEGVPPP 116
>gb|ACF79169.1| unknown [Zea mays] gi|414872896|tpg|DAA51453.1| TPA: ribosomal
protein L13A-like protein [Zea mays]
Length = 206
Score = 149 bits (376), Expect = 4e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGEAALARLKTYEGVPPP 116
>gb|EYU32659.1| hypothetical protein MIMGU_mgv1a013922mg [Mimulus guttatus]
Length = 206
Score = 149 bits (375), Expect = 5e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKVYEGVPPP 116
>gb|EYU31410.1| hypothetical protein MIMGU_mgv1a013934mg [Mimulus guttatus]
Length = 206
Score = 149 bits (375), Expect = 5e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKVYEGVPPP 116
>ref|XP_006855707.1| hypothetical protein AMTR_s00044p00144180 [Amborella trichopoda]
gi|548859494|gb|ERN17174.1| hypothetical protein
AMTR_s00044p00144180 [Amborella trichopoda]
Length = 171
Score = 149 bits (375), Expect = 5e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGAAALSRLKVYEGVPPP 116
>ref|XP_004981725.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform X2 [Setaria
italica]
Length = 206
Score = 149 bits (375), Expect = 5e-34
Identities = 71/84 (84%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFR+PAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRSPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEGVPPP
Sbjct: 93 IPHKTKRGEAALARLKTYEGVPPP 116
>ref|XP_007223449.1| hypothetical protein PRUPE_ppa011551mg [Prunus persica]
gi|462420385|gb|EMJ24648.1| hypothetical protein
PRUPE_ppa011551mg [Prunus persica]
Length = 206
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGVPPP 116
>ref|XP_007223448.1| hypothetical protein PRUPE_ppa011551mg [Prunus persica]
gi|462420384|gb|EMJ24647.1| hypothetical protein
PRUPE_ppa011551mg [Prunus persica]
Length = 187
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGVPPP 116
>ref|XP_004154637.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 2 [Cucumis
sativus] gi|449476094|ref|XP_004154638.1| PREDICTED: 60S
ribosomal protein L13a-4-like isoform 3 [Cucumis
sativus]
Length = 208
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGVPPP 116
>ref|XP_004154636.1| PREDICTED: 60S ribosomal protein L13a-4-like isoform 1 [Cucumis
sativus]
Length = 241
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 66 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 125
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 126 IPHKTKRGAAALARLKAYEGVPPP 149
>ref|XP_004138959.1| PREDICTED: 60S ribosomal protein L13a-4-like [Cucumis sativus]
gi|449442541|ref|XP_004139040.1| PREDICTED: 60S
ribosomal protein L13a-4-like [Cucumis sativus]
Length = 206
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGVPPP 116
>ref|XP_004133995.1| PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis sativus]
gi|449525004|ref|XP_004169511.1| PREDICTED: 60S
ribosomal protein L13a-2-like [Cucumis sativus]
Length = 206
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGVPPP 116
>ref|XP_002267491.1| PREDICTED: 60S ribosomal protein L13a-4 [Vitis vinifera]
Length = 206
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEG+PPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGIPPP 116
>ref|XP_002268901.1| PREDICTED: 60S ribosomal protein L13a-4 [Vitis vinifera]
gi|147801437|emb|CAN63603.1| hypothetical protein
VITISV_006449 [Vitis vinifera]
Length = 206
Score = 148 bits (374), Expect = 7e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAP+KILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEG+PPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGIPPP 116
>ref|XP_004297119.1| PREDICTED: 60S ribosomal protein L13a-4-like [Fragaria vesca subsp.
vesca]
Length = 206
Score = 148 bits (373), Expect = 9e-34
Identities = 70/84 (83%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEG+PPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGIPPP 116
>ref|XP_004288082.1| PREDICTED: 60S ribosomal protein L13a-4-like [Fragaria vesca subsp.
vesca] gi|470103309|ref|XP_004288083.1| PREDICTED: 60S
ribosomal protein L13a-4-like [Fragaria vesca subsp.
vesca]
Length = 206
Score = 148 bits (373), Expect = 9e-34
Identities = 70/84 (83%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEG+PPP
Sbjct: 93 IPHKTKRGAAALARLKAYEGIPPP 116
>pdb|3J61|O Chain O, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471706|gb|AAW50984.1| ribosomal protein
L13a [Triticum aestivum] gi|326516494|dbj|BAJ92402.1|
predicted protein [Hordeum vulgare subsp. vulgare]
gi|473953967|gb|EMS50837.1| 60S ribosomal protein L13a-4
[Triticum urartu] gi|475585532|gb|EMT20078.1| 60S
ribosomal protein L13a-4 [Aegilops tauschii]
Length = 206
Score = 148 bits (373), Expect = 9e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQ+VVVVRCEEIC+SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTARGEAALARLKAYEGVPPP 116
>gb|ADR71263.1| 60S ribosomal protein L13aA [Hevea brasiliensis]
Length = 206
Score = 148 bits (373), Expect = 9e-34
Identities = 69/84 (82%), Positives = 72/84 (85%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT YEG+PPP
Sbjct: 93 IPHKTKRGEAALARLKVYEGIPPP 116
>ref|XP_003559332.1| PREDICTED: 60S ribosomal protein L13a-4-like [Brachypodium
distachyon]
Length = 206
Score = 148 bits (373), Expect = 9e-34
Identities = 71/84 (84%), Positives = 73/84 (86%)
Frame = -3
Query: 253 LNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 74
LNGQ+VVVVRCEEIC+SGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM
Sbjct: 33 LNGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGM 92
Query: 73 IPHKTXXXXXXXXXXXAYEGVPPP 2
IPHKT AYEGVPPP
Sbjct: 93 IPHKTKRGEAALARLKAYEGVPPP 116