BLASTX nr result
ID: Cocculus23_contig00000601
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus23_contig00000601
(255 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004984085.1| PREDICTED: 40S ribosomal protein SA-like [Se... 114 1e-23
ref|XP_004958311.1| PREDICTED: 40S ribosomal protein SA-like [Se... 114 1e-23
ref|XP_006851847.1| hypothetical protein AMTR_s00041p00084080 [A... 113 2e-23
pdb|3J60|A Chain A, Localization Of The Small Subunit Ribosomal ... 112 4e-23
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g... 112 4e-23
ref|XP_003638087.1| 40S ribosomal protein SA [Medicago truncatul... 112 4e-23
gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indi... 112 4e-23
ref|XP_004985475.1| PREDICTED: 40S ribosomal protein SA-like [Se... 112 5e-23
ref|XP_002529989.1| 40S ribosomal protein sa, putative [Ricinus ... 112 5e-23
gb|EXB88188.1| 40S ribosomal protein SA [Morus notabilis] 112 7e-23
gb|EXB88183.1| 40S ribosomal protein SA [Morus notabilis] 112 7e-23
ref|NP_001237424.1| 40S ribosomal protein SA [Glycine max] gi|33... 111 9e-23
ref|XP_007135387.1| hypothetical protein PHAVU_010G125100g [Phas... 111 9e-23
ref|XP_007135386.1| hypothetical protein PHAVU_010G125100g [Phas... 111 9e-23
ref|XP_007135385.1| hypothetical protein PHAVU_010G125100g [Phas... 111 9e-23
ref|XP_003547867.1| PREDICTED: 40S ribosomal protein SA [Glycine... 111 9e-23
ref|NP_001242462.1| uncharacterized protein LOC100786575 [Glycin... 111 9e-23
ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [S... 111 9e-23
ref|XP_007024738.1| 40s ribosomal protein SA [Theobroma cacao] g... 110 2e-22
ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu... 110 2e-22
>ref|XP_004984085.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 114 bits (286), Expect = 1e-23
Identities = 56/67 (83%), Positives = 60/67 (89%)
Frame = +3
Query: 54 ISRALAMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTW 233
++ A A RALSQKE DIQMMLAADVHLGTKNCD+QMERYVFKRRTDGIFIIN+GKTW
Sbjct: 1 MATAAAGGAPRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFIINLGKTW 60
Query: 234 EKLQLAA 254
EKLQLAA
Sbjct: 61 EKLQLAA 67
>ref|XP_004958311.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 114 bits (286), Expect = 1e-23
Identities = 56/67 (83%), Positives = 61/67 (91%)
Frame = +3
Query: 54 ISRALAMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTW 233
++ A A ARALSQKE DIQMMLAADVHLGTKNCD+QMERYVFKRRTDGI+IIN+GKTW
Sbjct: 1 MAAAPAGGAARALSQKELDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTW 60
Query: 234 EKLQLAA 254
EKLQLAA
Sbjct: 61 EKLQLAA 67
>ref|XP_006851847.1| hypothetical protein AMTR_s00041p00084080 [Amborella trichopoda]
gi|548855430|gb|ERN13314.1| hypothetical protein
AMTR_s00041p00084080 [Amborella trichopoda]
Length = 312
Score = 113 bits (283), Expect = 2e-23
Identities = 54/61 (88%), Positives = 57/61 (93%)
Frame = +3
Query: 72 MATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLA 251
MAT LSQKEADIQMMLAADVHLGTKNCD+QMERY FKRRTDGI+IIN+GKTWEKLQLA
Sbjct: 1 MATKTGLSQKEADIQMMLAADVHLGTKNCDFQMERYAFKRRTDGIYIINLGKTWEKLQLA 60
Query: 252 A 254
A
Sbjct: 61 A 61
>pdb|3J60|A Chain A, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 260
Score = 112 bits (281), Expect = 4e-23
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +3
Query: 75 ATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLAA 254
A ARALSQ+E DIQMMLAADVHLGTKNCD+QMERYV+KRRTDGI+IIN+GKTWEKLQLAA
Sbjct: 7 AAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAA 66
>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group]
gi|33146943|dbj|BAC79991.1| putative 40S ribosomal
protein [Oryza sativa Japonica Group]
gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza sativa
Japonica Group] gi|125601085|gb|EAZ40661.1| hypothetical
protein OsJ_25132 [Oryza sativa Japonica Group]
gi|215678910|dbj|BAG96340.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215734975|dbj|BAG95697.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740977|dbj|BAG97472.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764959|dbj|BAG86656.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 305
Score = 112 bits (281), Expect = 4e-23
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +3
Query: 75 ATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLAA 254
A ARALSQ+E DIQMMLAADVHLGTKNCD+QMERYV+KRRTDGI+IIN+GKTWEKLQLAA
Sbjct: 7 AAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAA 66
>ref|XP_003638087.1| 40S ribosomal protein SA [Medicago truncatula]
gi|355504022|gb|AES85225.1| 40S ribosomal protein SA
[Medicago truncatula]
Length = 297
Score = 112 bits (281), Expect = 4e-23
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +3
Query: 72 MATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLA 251
MA R LSQKEADIQMMLAADVHLGTKNCD+QMERY+FKRR DGI+IIN+GKTWEKLQLA
Sbjct: 1 MAAPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLA 60
Query: 252 A 254
A
Sbjct: 61 A 61
>gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
Length = 305
Score = 112 bits (281), Expect = 4e-23
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +3
Query: 75 ATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLAA 254
A ARALSQ+E DIQMMLAADVHLGTKNCD+QMERYV+KRRTDGI+IIN+GKTWEKLQLAA
Sbjct: 7 AAARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAA 66
>ref|XP_004985475.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 112 bits (280), Expect = 5e-23
Identities = 53/57 (92%), Positives = 56/57 (98%)
Frame = +3
Query: 84 RALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLAA 254
RALSQKE DIQMMLAADVHLGTKNCD+QMERYVFKRRTDGI+IIN+GKTWEKLQLAA
Sbjct: 11 RALSQKETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAA 67
>ref|XP_002529989.1| 40S ribosomal protein sa, putative [Ricinus communis]
gi|223530512|gb|EEF32394.1| 40S ribosomal protein sa,
putative [Ricinus communis]
Length = 309
Score = 112 bits (280), Expect = 5e-23
Identities = 54/62 (87%), Positives = 58/62 (93%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A AR LSQKEADIQMMLAA+VHLGTKNCD+QMERYVFKRR DGI+IIN+GKTWEKLQL
Sbjct: 9 AAAPARQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQL 68
Query: 249 AA 254
AA
Sbjct: 69 AA 70
>gb|EXB88188.1| 40S ribosomal protein SA [Morus notabilis]
Length = 308
Score = 112 bits (279), Expect = 7e-23
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A+A +R LSQKEADIQMMLAA+VHLGTKNCD+QMERYVFKRR DGI+IIN+GKTWEKLQL
Sbjct: 6 AVAPSRELSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQL 65
Query: 249 AA 254
AA
Sbjct: 66 AA 67
>gb|EXB88183.1| 40S ribosomal protein SA [Morus notabilis]
Length = 307
Score = 112 bits (279), Expect = 7e-23
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A+A +R LSQKEADIQMMLAA+VHLGTKNCD+QMERYVFKRR DGI+IIN+GKTWEKLQL
Sbjct: 6 AVAPSRELSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQL 65
Query: 249 AA 254
AA
Sbjct: 66 AA 67
>ref|NP_001237424.1| 40S ribosomal protein SA [Glycine max]
gi|3334320|sp|O22518.1|RSSA_SOYBN RecName: Full=40S
ribosomal protein SA; AltName: Full=p40
gi|2444420|gb|AAB82659.1| ribosome-associated protein
p40 [Glycine max]
Length = 310
Score = 111 bits (278), Expect = 9e-23
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A R LSQKEADIQMMLAADVHLGTKNCD+QMERY+FKRR DGI+IIN+GKTWEKLQL
Sbjct: 8 AAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQL 67
Query: 249 AA 254
AA
Sbjct: 68 AA 69
>ref|XP_007135387.1| hypothetical protein PHAVU_010G125100g [Phaseolus vulgaris]
gi|561008432|gb|ESW07381.1| hypothetical protein
PHAVU_010G125100g [Phaseolus vulgaris]
Length = 310
Score = 111 bits (278), Expect = 9e-23
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A R LSQKEADIQMMLAADVHLGTKNCD+QMERY+FKRR DGI+IIN+GKTWEKLQL
Sbjct: 8 AAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQL 67
Query: 249 AA 254
AA
Sbjct: 68 AA 69
>ref|XP_007135386.1| hypothetical protein PHAVU_010G125100g [Phaseolus vulgaris]
gi|561008431|gb|ESW07380.1| hypothetical protein
PHAVU_010G125100g [Phaseolus vulgaris]
Length = 312
Score = 111 bits (278), Expect = 9e-23
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A R LSQKEADIQMMLAADVHLGTKNCD+QMERY+FKRR DGI+IIN+GKTWEKLQL
Sbjct: 8 AAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQL 67
Query: 249 AA 254
AA
Sbjct: 68 AA 69
>ref|XP_007135385.1| hypothetical protein PHAVU_010G125100g [Phaseolus vulgaris]
gi|561008430|gb|ESW07379.1| hypothetical protein
PHAVU_010G125100g [Phaseolus vulgaris]
Length = 308
Score = 111 bits (278), Expect = 9e-23
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A R LSQKEADIQMMLAADVHLGTKNCD+QMERY+FKRR DGI+IIN+GKTWEKLQL
Sbjct: 8 AAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQL 67
Query: 249 AA 254
AA
Sbjct: 68 AA 69
>ref|XP_003547867.1| PREDICTED: 40S ribosomal protein SA [Glycine max]
Length = 311
Score = 111 bits (278), Expect = 9e-23
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A R LSQKEADIQMMLAADVHLGTKNCD+QMERY+FKRR DGI+IIN+GKTWEKLQL
Sbjct: 8 AAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQL 67
Query: 249 AA 254
AA
Sbjct: 68 AA 69
>ref|NP_001242462.1| uncharacterized protein LOC100786575 [Glycine max]
gi|255639911|gb|ACU20248.1| unknown [Glycine max]
Length = 313
Score = 111 bits (278), Expect = 9e-23
Identities = 52/60 (86%), Positives = 58/60 (96%)
Frame = +3
Query: 75 ATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQLAA 254
A++R LSQ+E DIQMMLAADVHLGTKNCD+QMERYVFKRRTDGI+IIN+GKTWEKLQLAA
Sbjct: 9 ASSRQLSQRETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAA 68
>ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor]
gi|241926559|gb|EER99703.1| hypothetical protein
SORBIDRAFT_02g039270 [Sorghum bicolor]
Length = 306
Score = 111 bits (278), Expect = 9e-23
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = +3
Query: 54 ISRALAMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTW 233
++ A A ARALSQ+E DIQMMLAADVHLGTKNCD+QMERYV+KRRTDGI+IIN+GKTW
Sbjct: 1 MAAAPAGGGARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTW 60
Query: 234 EKLQLAA 254
EKLQLAA
Sbjct: 61 EKLQLAA 67
>ref|XP_007024738.1| 40s ribosomal protein SA [Theobroma cacao]
gi|508780104|gb|EOY27360.1| 40s ribosomal protein SA
[Theobroma cacao]
Length = 313
Score = 110 bits (276), Expect = 2e-22
Identities = 54/62 (87%), Positives = 57/62 (91%)
Frame = +3
Query: 69 AMATARALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKLQL 248
A A AR LS KEADIQMMLAA+VHLGTKNCDYQMERYVFKRR DGI+IIN+GKTWEKLQL
Sbjct: 6 APAGARQLSPKEADIQMMLAAEVHLGTKNCDYQMERYVFKRRNDGIYIINLGKTWEKLQL 65
Query: 249 AA 254
AA
Sbjct: 66 AA 67
>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
Length = 309
Score = 110 bits (276), Expect = 2e-22
Identities = 55/64 (85%), Positives = 60/64 (93%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 LAMATA-RALSQKEADIQMMLAADVHLGTKNCDYQMERYVFKRRTDGIFIINVGKTWEKL 242
+A ATA R LSQKEADIQMMLAA+VHLGTKNCD+QMERYVFKRR DGI+IIN+GKTWEKL
Sbjct: 1 MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
Query: 243 QLAA 254
QLAA
Sbjct: 61 QLAA 64