BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus23_contig00000521
         (549 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   244   1e-62
gb|EXB53890.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       239   3e-61
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   239   3e-61
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   239   3e-61
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   238   9e-61
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   237   2e-60
ref|XP_003528344.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   237   2e-60
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   236   2e-60
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   236   2e-60
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       235   6e-60
emb|CBI26820.3| unnamed protein product [Vitis vinifera]              234   1e-59
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   234   1e-59
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr...   231   9e-59
gb|EXB53891.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       231   1e-58
gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       229   3e-58
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   229   3e-58
emb|CBI26821.3| unnamed protein product [Vitis vinifera]              229   3e-58
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   229   3e-58
ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   229   4e-58
ref|XP_007153218.1| hypothetical protein PHAVU_003G016800g [Phas...   228   1e-57

>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
           family protein [Populus trichocarpa]
          Length = 1133

 Score =  244 bits (622), Expect = 1e-62
 Identities = 128/182 (70%), Positives = 142/182 (78%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PRTSS++E R+ TAIY RILSTL+NGI IGDKKF+FLAFSSSQLR+NS WMFAS+ GLTA
Sbjct: 421 PRTSSRNELRR-TAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTA 479

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IR WMG FH+I+NVA+YAARLGQSF SS ETL+                 G +Y+FSD
Sbjct: 480 ADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSD 539

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS  FARKVA KCG K FTPSAFQIRY GYKGVVAVDP S  KLSLR+SMFKY S 
Sbjct: 540 GIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESE 599

Query: 7   NT 2
           NT
Sbjct: 600 NT 601


>gb|EXB53890.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 885

 Score =  239 bits (610), Expect = 3e-61
 Identities = 124/177 (70%), Positives = 135/177 (76%)
 Frame = -3

Query: 535 SKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHIR 356
           S +  ++ T +Y+RILSTLRNGI IGDKKF+FLAFSSSQLR+ SAWMFAS+DGLTAA IR
Sbjct: 229 SSENGKRRTRLYDRILSTLRNGILIGDKKFEFLAFSSSQLREGSAWMFASRDGLTAADIR 288

Query: 355 EWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIGK 176
           +WMGDF  IKNVAKYAARLGQSF SS ET                  DG  Y FSDGIGK
Sbjct: 289 KWMGDFRCIKNVAKYAARLGQSFGSSHETFRVGRHEVELIPDIQVERDGKNYCFSDGIGK 348

Query: 175 ISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHN 5
           IS  FAR+VAKKCG+ RFTPSAFQIRYGGYKGVVAVDP S  KLSLRKSM KY S N
Sbjct: 349 ISEDFAREVAKKCGLNRFTPSAFQIRYGGYKGVVAVDPTSSMKLSLRKSMCKYESKN 405


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  239 bits (610), Expect = 3e-61
 Identities = 121/179 (67%), Positives = 137/179 (76%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA  DGLT+AHI
Sbjct: 421 SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDGLTSAHI 480

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                  G +YVFSDGIG
Sbjct: 481 RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIG 540

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FAR+VAKKCG+  F+PSAFQIRYGGYKGVVAVDPNS  KLSLRKSM K+ S NT
Sbjct: 541 KISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENT 599


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  239 bits (610), Expect = 3e-61
 Identities = 121/179 (67%), Positives = 137/179 (76%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA  DGLT+AHI
Sbjct: 411 SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDGLTSAHI 470

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                  G +YVFSDGIG
Sbjct: 471 RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIG 530

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FAR+VAKKCG+  F+PSAFQIRYGGYKGVVAVDPNS  KLSLRKSM K+ S NT
Sbjct: 531 KISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENT 589


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  238 bits (606), Expect = 9e-61
 Identities = 120/179 (67%), Positives = 137/179 (76%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA  +GLT+AHI
Sbjct: 421 SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIEGLTSAHI 480

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                  G +YVFSDGIG
Sbjct: 481 RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIG 540

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FAR+VAKKCG+  F+PSAFQIRYGGYKGVVAVDPNS  KLSLRKSM K+ S NT
Sbjct: 541 KISAEFARRVAKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENT 599


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
           gi|482575337|gb|EOA39524.1| hypothetical protein
           CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  237 bits (604), Expect = 2e-60
 Identities = 121/179 (67%), Positives = 136/179 (75%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA +D LTAAHI
Sbjct: 420 SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPRDRLTAAHI 479

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                    +YVFSDGIG
Sbjct: 480 RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEAMYLDTRYVFSDGIG 539

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FARKVAKKCG+  F+PSAFQIRYGGYKGVVAVDPNS  KLSLRKSM K+ S NT
Sbjct: 540 KISAEFARKVAKKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESGNT 598


>ref|XP_003528344.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Glycine max]
          Length = 1135

 Score =  237 bits (604), Expect = 2e-60
 Identities = 123/183 (67%), Positives = 143/183 (78%), Gaps = 1/183 (0%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PR+SS D DR+ T ++ER+LSTL+NGIAIGDKKF+FLAFS SQLRDNS WMFAS+ GLTA
Sbjct: 412 PRSSSTDVDRE-TKLHERVLSTLKNGIAIGDKKFEFLAFSPSQLRDNSVWMFASRTGLTA 470

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           + IR+WMG+FHEI+NVAKYAARLGQSFSSS+ET++                   KY F+D
Sbjct: 471 SDIRKWMGEFHEIRNVAKYAARLGQSFSSSRETVSVGEHEIEIIPDIELRRGETKYCFTD 530

Query: 187 GIGKISHTFARKVAKKCGIK-RFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTS 11
           GIGKIS   A++VAKKCG +    PSAFQIRYGGYKGVVA+DP S TKLSLRKSMFKY S
Sbjct: 531 GIGKISSELAQEVAKKCGCRDNNIPSAFQIRYGGYKGVVAIDPTSSTKLSLRKSMFKYKS 590

Query: 10  HNT 2
            NT
Sbjct: 591 ENT 593


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  236 bits (603), Expect = 2e-60
 Identities = 120/179 (67%), Positives = 136/179 (75%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA  D +TAAHI
Sbjct: 420 SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHI 479

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                  G +YVFSDGIG
Sbjct: 480 RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIG 539

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FARKVA+KCG+  F+PSAFQIRYGGYKGVVAVDPNS  KLSLRKSM K+ S NT
Sbjct: 540 KISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENT 598


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  236 bits (603), Expect = 2e-60
 Identities = 120/179 (67%), Positives = 136/179 (75%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA  D +TAAHI
Sbjct: 420 SPRSSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHI 479

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                  G +YVFSDGIG
Sbjct: 480 RAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFSDGIG 539

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FARKVA+KCG+  F+PSAFQIRYGGYKGVVAVDPNS  KLSLRKSM K+ S NT
Sbjct: 540 KISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFESENT 598


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  235 bits (599), Expect = 6e-60
 Identities = 123/179 (68%), Positives = 138/179 (77%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PRTS+ +EDR+ T IY RILS LRNGI IGD+KF+FLAFSSSQLRDNS WMFA+ DG +A
Sbjct: 422 PRTSNANEDRR-TGIYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGHSA 480

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
             IR+W+GDF  I+NVAKYAARLGQSF SS ETLT                  +KYVFSD
Sbjct: 481 DTIRQWIGDFRSIRNVAKYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYVFSD 540

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTS 11
           GIGKIS TFA++VAKKCG+K   PSAFQIRY GYKGVVAVDP S TKLSLRKSM+KY S
Sbjct: 541 GIGKISSTFAKRVAKKCGLKDCVPSAFQIRYCGYKGVVAVDPTSSTKLSLRKSMWKYES 599


>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  234 bits (596), Expect = 1e-59
 Identities = 125/182 (68%), Positives = 134/182 (73%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PR S   ++ + T +Y RILS L+NGI IGDKKFDFLAFSSSQLRDNSAWMFAS+ GLTA
Sbjct: 343 PRMS---KEGRRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTA 399

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IR WMGDF +I+NVAKYAARLGQSFSSSKETL                     YVFSD
Sbjct: 400 AEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSD 459

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS   A +VA KCG K  TPSAFQIRYGGYKGVVAVDP S  KLSLRKSMFKY S 
Sbjct: 460 GIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESD 519

Query: 7   NT 2
           NT
Sbjct: 520 NT 521


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  234 bits (596), Expect = 1e-59
 Identities = 125/182 (68%), Positives = 134/182 (73%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PR S   ++ + T +Y RILS L+NGI IGDKKFDFLAFSSSQLRDNSAWMFAS+ GLTA
Sbjct: 412 PRMS---KEGRRTGVYRRILSILQNGIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTA 468

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IR WMGDF +I+NVAKYAARLGQSFSSSKETL                     YVFSD
Sbjct: 469 AEIRSWMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSD 528

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS   A +VA KCG K  TPSAFQIRYGGYKGVVAVDP S  KLSLRKSMFKY S 
Sbjct: 529 GIGKISPQLAHRVAIKCGCKSSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESD 588

Query: 7   NT 2
           NT
Sbjct: 589 NT 590


>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
           gi|557094740|gb|ESQ35322.1| hypothetical protein
           EUTSA_v10006629mg [Eutrema salsugineum]
          Length = 1108

 Score =  231 bits (589), Expect = 9e-59
 Identities = 119/179 (66%), Positives = 134/179 (74%)
 Frame = -3

Query: 538 SSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHI 359
           S +   ++ T +Y+RI S LR+GI IGDKKF+FLAFSSSQLR+NSAWMFA  DGL+A  I
Sbjct: 420 SPRSTTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDGLSAEII 479

Query: 358 REWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIG 179
           R WMGDF  I+NVAKYAARLGQSFSSS+ETL                  G +YVFSDGIG
Sbjct: 480 RAWMGDFEHIRNVAKYAARLGQSFSSSRETLNVRTDEIEVIPDVEITYLGTRYVFSDGIG 539

Query: 178 KISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHNT 2
           KIS  FAR+VAKKCG+  FTPSAFQIRYGGYKGVVAVD NS  KLSLRKSM K+ S NT
Sbjct: 540 KISSEFARRVAKKCGLTEFTPSAFQIRYGGYKGVVAVDRNSYKKLSLRKSMSKFESKNT 598


>gb|EXB53891.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1118

 Score =  231 bits (588), Expect = 1e-58
 Identities = 120/177 (67%), Positives = 133/177 (75%)
 Frame = -3

Query: 535 SKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHIR 356
           S    ++ T +YERILSTLRNGI IGDKKF+FLAFSSSQLR+ S WMFAS+DGLTAA+IR
Sbjct: 390 SSANGKRRTRLYERILSTLRNGIIIGDKKFEFLAFSSSQLREGSTWMFASRDGLTAANIR 449

Query: 355 EWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIGK 176
           +WMGDF  IKNVAKYAARLGQSF SS ET                  DG  Y FSDGIGK
Sbjct: 450 KWMGDFRCIKNVAKYAARLGQSFGSSHETFRVGRHEVELIPDIQVERDGKNYCFSDGIGK 509

Query: 175 ISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSHN 5
           IS  FA++VAKKCG+ RFTPSAFQIRYGGYKGVVAVDP S  KLSLR+SM K  + N
Sbjct: 510 ISEDFAKEVAKKCGLNRFTPSAFQIRYGGYKGVVAVDPTSSMKLSLRESMCKCEAKN 566


>gb|EXB32317.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 862

 Score =  229 bits (584), Expect = 3e-58
 Identities = 119/178 (66%), Positives = 133/178 (74%), Gaps = 1/178 (0%)
 Frame = -3

Query: 535 SKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTAAHIR 356
           S    ++ T +Y+RIL TLRNGI IGDKKF+FLAFSSSQL++ S WMFAS+DGLTAA IR
Sbjct: 405 SSANGKRRTRLYDRILFTLRNGILIGDKKFEFLAFSSSQLKEGSLWMFASRDGLTAADIR 464

Query: 355 EWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSDGIGK 176
            WMGDFH+IKNVA+YAARLGQSF SS ET                  DG  Y FSDGIGK
Sbjct: 465 NWMGDFHDIKNVARYAARLGQSFGSSHETFRVGRDEVELIPDIEVKRDGKNYCFSDGIGK 524

Query: 175 ISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLR-KSMFKYTSHN 5
           IS  FA++VAKKCG+ R+TPSAFQIRYGGYKGVVAVDP S  KLSLR KSM KY S N
Sbjct: 525 ISEDFAKEVAKKCGLNRYTPSAFQIRYGGYKGVVAVDPTSSMKLSLRKKSMCKYKSKN 582


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  229 bits (584), Expect = 3e-58
 Identities = 125/182 (68%), Positives = 135/182 (74%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PR SS   D   T IY RILSTLRNGI IGD+KF+FLAFSSSQLR++SAWMFAS+ GLTA
Sbjct: 425 PRGSSAT-DITRTRIYTRILSTLRNGILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTA 483

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IREWMG+F EI+NVAKYAARLGQSFSSSKETL+                   KYVFSD
Sbjct: 484 AEIREWMGNFREIRNVAKYAARLGQSFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSD 543

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGK+S  FARKVA KCG+K   PSAFQIRYGGYKGVVA DP S  KLSLR SM KY S 
Sbjct: 544 GIGKVSAEFARKVASKCGLKDNPPSAFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESE 603

Query: 7   NT 2
            T
Sbjct: 604 LT 605


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score =  229 bits (584), Expect = 3e-58
 Identities = 125/182 (68%), Positives = 134/182 (73%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PR S++    + T +Y RILS L+NGI IGDKKFDFLA SSSQLRDNSAWMFAS+ GLTA
Sbjct: 377 PRMSNEG---RRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTA 433

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IR  MGDF +I+NVAKYAARLGQSFSSSKETL                 DG  YVFSD
Sbjct: 434 ADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSD 493

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS   A +VA KCG K  TPSAFQIRYGGYKGVVAVDP S  KLSLRKSMFKY S 
Sbjct: 494 GIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESE 553

Query: 7   NT 2
           NT
Sbjct: 554 NT 555


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  229 bits (584), Expect = 3e-58
 Identities = 125/182 (68%), Positives = 134/182 (73%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           PR S++    + T +Y RILS L+NGI IGDKKFDFLA SSSQLRDNSAWMFAS+ GLTA
Sbjct: 410 PRMSNEG---RRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTA 466

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IR  MGDF +I+NVAKYAARLGQSFSSSKETL                 DG  YVFSD
Sbjct: 467 ADIRSRMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSD 526

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS   A +VA KCG K  TPSAFQIRYGGYKGVVAVDP S  KLSLRKSMFKY S 
Sbjct: 527 GIGKISAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESE 586

Query: 7   NT 2
           NT
Sbjct: 587 NT 588


>ref|XP_006495371.1| PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Citrus
           sinensis]
          Length = 633

 Score =  229 bits (583), Expect = 4e-58
 Identities = 123/182 (67%), Positives = 137/182 (75%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           P TSS +E+R HT IYER+LSTLRNGI IGDKKF+ LAFS+SQ++DNS WMFAS+  LTA
Sbjct: 253 PVTSSTNEER-HTRIYERVLSTLRNGIVIGDKKFETLAFSNSQVKDNSLWMFASRPELTA 311

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           A IRE MGDF +IKNVAKYAARLGQSFSSS+E L                 DG+ Y FSD
Sbjct: 312 ADIRERMGDFRDIKNVAKYAARLGQSFSSSREALHVHSSDIEIIPDVEVEKDGITYCFSD 371

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS   A  VAK CG   +TPSA+QIRYGGYKGVVAVDP S TKLSLRKSMFKY S 
Sbjct: 372 GIGKISSELAEIVAKNCGFTIYTPSAYQIRYGGYKGVVAVDPTSSTKLSLRKSMFKYKSE 431

Query: 7   NT 2
           +T
Sbjct: 432 ST 433


>ref|XP_007153218.1| hypothetical protein PHAVU_003G016800g [Phaseolus vulgaris]
           gi|561026572|gb|ESW25212.1| hypothetical protein
           PHAVU_003G016800g [Phaseolus vulgaris]
          Length = 1139

 Score =  228 bits (580), Expect = 1e-57
 Identities = 121/182 (66%), Positives = 138/182 (75%)
 Frame = -3

Query: 547 PRTSSKDEDRKHTAIYERILSTLRNGIAIGDKKFDFLAFSSSQLRDNSAWMFASKDGLTA 368
           P +SS   DR+ T ++ER+L+TL+NGI IGDKKF+FLAFS SQLRDNS WM AS+ GLTA
Sbjct: 414 PSSSSVSMDRE-TKLHERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTA 472

Query: 367 AHIREWMGDFHEIKNVAKYAARLGQSFSSSKETLTXXXXXXXXXXXXXXXXDGMKYVFSD 188
           + IR WMG+FHEI+NVAKYAARLGQSFSSS+ET+                    KY FSD
Sbjct: 473 SDIRNWMGEFHEIRNVAKYAARLGQSFSSSRETVRVERHEVKIIPDIEFRRGENKYCFSD 532

Query: 187 GIGKISHTFARKVAKKCGIKRFTPSAFQIRYGGYKGVVAVDPNSVTKLSLRKSMFKYTSH 8
           GIGKIS+  A++VAKKCG  R TPSAFQIRYGGYKGVVAVDP S TKLSLRKSM KY S 
Sbjct: 533 GIGKISYELAQEVAKKCGC-RDTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSE 591

Query: 7   NT 2
           NT
Sbjct: 592 NT 593