BLASTX nr result
ID: Cocculus22_contig00030080
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00030080
(404 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 115 5e-24
ref|XP_007203327.1| hypothetical protein PRUPE_ppa020104mg, part... 114 2e-23
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun... 113 2e-23
ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prun... 113 2e-23
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 112 4e-23
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 111 9e-23
ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, part... 110 2e-22
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 109 3e-22
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 109 3e-22
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The... 108 8e-22
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par... 108 8e-22
ref|XP_007201921.1| hypothetical protein PRUPE_ppa024633mg [Prun... 108 8e-22
ref|XP_007200213.1| hypothetical protein PRUPE_ppa015697mg [Prun... 108 8e-22
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 107 2e-21
ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobrom... 106 3e-21
ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus] 105 5e-21
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 104 1e-20
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594... 102 7e-20
gb|EMS54598.1| Transposon Ty3-G Gag-Pol polyprotein [Triticum ur... 102 7e-20
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 102 7e-20
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 115 bits (289), Expect = 5e-24
Identities = 54/123 (43%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLH 227
S +N+V DA S R LL + + GF+ K+LY D G IW++C N + + Y L+
Sbjct: 1023 SGKTNRVADALSRRASLLITLTQEVVGFECLKELYEGDADFGEIWTKCTNQEPMADYFLN 1082
Query: 226 NGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFV 47
G+LFKGN+LC+P SLR+K+ +D+HGGGL GH G+DKT A + ++F+ +++RDV V
Sbjct: 1083 EGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIV 1142
Query: 46 SRC 38
+C
Sbjct: 1143 RKC 1145
>ref|XP_007203327.1| hypothetical protein PRUPE_ppa020104mg, partial [Prunus persica]
gi|462398858|gb|EMJ04526.1| hypothetical protein
PRUPE_ppa020104mg, partial [Prunus persica]
Length = 428
Score = 114 bits (284), Expect = 2e-23
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECV-NDQLRKYLLHNGFL 215
NKV DA S + LL+ M+I +EGF+ ++LY D G IWSECV N+ ++ Y + +G+L
Sbjct: 321 NKVADALSRKVALLSVMQIRVEGFEQLQELYKGDKEFGEIWSECVQNNSVQDYHIQDGYL 380
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKF 86
FKG+KLC+PDCSLR I ++ HGGGL GHFG+ KT ++ KF
Sbjct: 381 FKGSKLCIPDCSLRLWIIEEQHGGGLGGHFGRAKTIDLVENKF 423
>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
gi|462417202|gb|EMJ21939.1| hypothetical protein
PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 113 bits (283), Expect = 2e-23
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLH 227
S +N+V DA S R LL + GF+ K+LY D IW++C N + + Y L+
Sbjct: 999 SGKTNRVVDALSRRASLLVTQTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMADYFLN 1058
Query: 226 NGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFV 47
G+LFKGN+LC+P SLR+K+ QD+HGGGL GH G+DKT A + ++F+ +++RDV V
Sbjct: 1059 EGYLFKGNQLCIPVSSLREKLIQDLHGGGLSGHLGRDKTIAGMKERFYWPQLKRDVGTIV 1118
Query: 46 SRC 38
+C
Sbjct: 1119 RKC 1121
>ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
gi|462416846|gb|EMJ21583.1| hypothetical protein
PRUPE_ppa021778mg [Prunus persica]
Length = 1384
Score = 113 bits (283), Expect = 2e-23
Identities = 53/123 (43%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLH 227
S +N+V DA S R +L + + GF+ K+LY D IW++C N + + Y L+
Sbjct: 948 SGKTNRVADALSRRASMLITLTQEVVGFECLKELYEGDADFREIWTKCTNQEPMADYFLN 1007
Query: 226 NGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFV 47
G+LFKGN+LC+P SLR+K+ QD+HGGGL GH G+DKT A + ++F+ +++RDV V
Sbjct: 1008 EGYLFKGNQLCIPVSSLREKLIQDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIV 1067
Query: 46 SRC 38
+C
Sbjct: 1068 RKC 1070
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 112 bits (281), Expect = 4e-23
Identities = 56/128 (43%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLHNGFL 215
N V DA S + +LL +E+ + G +S K+LYP D +++C + KY +H+GFL
Sbjct: 91 NIVADALSRKNVLLNQLEVKVPGIESIKELYPADLDFSEPYAKCTAGKGWEKYHIHDGFL 150
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQ 35
F+ NKLCVP CS+R + Q+ H GGL GHFG KT+ M+ F+ KMRRDV R V RC
Sbjct: 151 FRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCV 210
Query: 34 NGKKLRER 11
K + +
Sbjct: 211 TCHKAKSK 218
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 111 bits (278), Expect = 9e-23
Identities = 53/123 (43%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLH 227
S +N+V DA S R LL + + GF+ K+LY D IW++C N + + Y L
Sbjct: 1031 SGKTNRVADALSRRASLLITLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMTDYFLT 1090
Query: 226 NGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFV 47
G+LFKGN+LC+P SLR+K+ +D+HGGGL GH G+DKT A + ++F+ +++RDV V
Sbjct: 1091 EGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWPQLKRDVGTIV 1150
Query: 46 SRC 38
+C
Sbjct: 1151 RKC 1153
>ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
gi|462408434|gb|EMJ13768.1| hypothetical protein
PRUPE_ppa015570mg, partial [Prunus persica]
Length = 541
Score = 110 bits (275), Expect = 2e-22
Identities = 53/123 (43%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLH 227
S +N+V DA S R LL + + GF+ K+LY D IW++C N + + Y L+
Sbjct: 130 SGKTNRVADALSRRASLLVTLTQEVVGFECLKELYEGDDDFREIWTKCTNQEPMADYFLN 189
Query: 226 NGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFV 47
G+LFKGN+LC+P SLR+K+ +D+HGGGL GH G DKT A + + F+ +++RDV V
Sbjct: 190 EGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGCDKTIAGMEETFYWPQLKRDVGTIV 249
Query: 46 SRC 38
+C
Sbjct: 250 RKC 252
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 109 bits (273), Expect = 3e-22
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLHNGFL 215
N V DA S + +LL +E+ + G +S K+LY D +++C + KY +H+GFL
Sbjct: 1123 NIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFL 1182
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQ 35
F+ NKLCVP CS+R + Q+ H GGL GHFG KT+ M+ F+ KMRRDV R V RC
Sbjct: 1183 FRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCV 1242
Query: 34 NGKKLRER 11
K + +
Sbjct: 1243 TCHKAKSK 1250
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 109 bits (273), Expect = 3e-22
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQ-LRKYLLHNGFL 215
N V DA S + +LL +E+ + G +S K+LY D +++C + KY +H+GFL
Sbjct: 91 NIVADALSRKNVLLNQLEVKVTGIESIKELYSADLDFSEPYAKCTAGKGWEKYHIHDGFL 150
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQ 35
F+ NKLCVP CS+R + Q+ H GGL GHFG KT+ M+ F+ KMRRDV R V RC
Sbjct: 151 FRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQRLVQRCV 210
Query: 34 NGKKLRER 11
K + +
Sbjct: 211 TCHKAKSK 218
>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 786
Score = 108 bits (270), Expect = 8e-22
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSEC---VNDQLRKYL 233
S SN V DA S R +L+ M + GF+ K+ Y D + I ++ + + Y
Sbjct: 390 SGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYR 449
Query: 232 LHNGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCR 53
LH +LFKGN+LC+P+ SLR++I +++HG GL GHFG+DKT AM+ +++ KMRRDV R
Sbjct: 450 LHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVER 509
Query: 52 FVSRC 38
V RC
Sbjct: 510 LVKRC 514
>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
superfamily protein, partial [Theobroma cacao]
Length = 624
Score = 108 bits (270), Expect = 8e-22
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSEC---VNDQLRKYL 233
S SN V DA S R +L+ M + GF+ K+ Y D + I ++ + + Y
Sbjct: 390 SGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYR 449
Query: 232 LHNGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCR 53
LH +LFKGN+LC+P+ SLR++I +++HG GL GHFG+DKT AM+ +++ KMRRDV R
Sbjct: 450 LHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVER 509
Query: 52 FVSRC 38
V RC
Sbjct: 510 LVKRC 514
>ref|XP_007201921.1| hypothetical protein PRUPE_ppa024633mg [Prunus persica]
gi|462397328|gb|EMJ03120.1| hypothetical protein
PRUPE_ppa024633mg [Prunus persica]
Length = 441
Score = 108 bits (270), Expect = 8e-22
Identities = 53/120 (44%), Positives = 77/120 (64%)
Frame = -2
Query: 394 SNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQLRKYLLHNGFL 215
SNKV DA S R LLLT M + GF+ K+ Y DP+ SI + + +H+G+L
Sbjct: 172 SNKVADALSRRNLLLTTMSTQVIGFEELKEQYATDPYFSSI--------MLPFGMHDGYL 223
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQ 35
FKGN LC+ + SLR++I +++HG GL GHF +DKT AM+ +++ +M +DV R V +CQ
Sbjct: 224 FKGNLLCILEGSLREQIVRELHGNGLGGHFERDKTLAMVTDRYYWSRMYKDVDRLVRKCQ 283
>ref|XP_007200213.1| hypothetical protein PRUPE_ppa015697mg [Prunus persica]
gi|462395613|gb|EMJ01412.1| hypothetical protein
PRUPE_ppa015697mg [Prunus persica]
Length = 983
Score = 108 bits (270), Expect = 8e-22
Identities = 53/120 (44%), Positives = 77/120 (64%)
Frame = -2
Query: 394 SNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQLRKYLLHNGFL 215
SNKV DA S R LLLT M + GF+ K+ Y DP+ SI + + +H+G+L
Sbjct: 714 SNKVADALSRRNLLLTTMSTQVIGFEELKEQYATDPYFSSI--------MLPFGMHDGYL 765
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQ 35
FKGN LC+ + SLR++I +++HG GL GHF +DKT AM+ +++ +M +DV R V +CQ
Sbjct: 766 FKGNLLCILEGSLREQIVRELHGNGLGGHFERDKTLAMVTDRYYWSRMYKDVDRLVRKCQ 825
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 107 bits (266), Expect = 2e-21
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSEC---VNDQLRKYL 233
S SN V DA S R +L+ M + GF+ K+ Y D + I ++ + + Y
Sbjct: 938 SGQSNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYR 997
Query: 232 LHNGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCR 53
LH +LFKGN+LC+P+ SLR++I +++HG GL GHFG+DKT M+ +++ KMRRDV R
Sbjct: 998 LHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKMRRDVER 1057
Query: 52 FVSRC 38
V RC
Sbjct: 1058 LVKRC 1062
>ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobroma cacao]
gi|508724802|gb|EOY16699.1| Uncharacterized protein
TCM_035549 [Theobroma cacao]
Length = 1392
Score = 106 bits (265), Expect = 3e-21
Identities = 52/122 (42%), Positives = 77/122 (63%), Gaps = 3/122 (2%)
Frame = -2
Query: 394 SNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSEC---VNDQLRKYLLHN 224
SN V DA S R +L+ M + GF+ K+ Y D + I ++ + + Y LH
Sbjct: 881 SNTVADALSRRCKMLSVMSTQVTGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYRLHE 940
Query: 223 GFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVS 44
+LFKGN+LC+P+ SLR++I +++HG GL GHFG+DKT AM+ +++ KMR+DV R V
Sbjct: 941 DYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRQDVERLVK 1000
Query: 43 RC 38
RC
Sbjct: 1001 RC 1002
>ref|XP_004154771.1| PREDICTED: kanadaptin-like [Cucumis sativus]
Length = 962
Score = 105 bits (263), Expect = 5e-21
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVND-QLRKYLLH 227
S NKV DA S++ LL + I IE F +LY D +W++C N + + +
Sbjct: 20 SGKENKVADALFSKSSLLAILSIEIEAFKHLPNLYEEDVDFSEVWAKCNNFIKAEDFHIM 79
Query: 226 NGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFV 47
G+LFKG++LC+P SLR+ + ++ H GGL GHFGQDKTF +I +FF ++RRD FV
Sbjct: 80 EGYLFKGDQLCIPRTSLREALLKEAHSGGLAGHFGQDKTFEIISHRFFWPQLRRDCNNFV 139
Query: 46 SRC 38
RC
Sbjct: 140 KRC 142
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 104 bits (259), Expect = 1e-20
Identities = 52/132 (39%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQLRKY---LLHNG 221
NKV DA S +L M + + GFD K Y P G I+ E N R+Y + +G
Sbjct: 911 NKVADALSRVATILHTMTVQVTGFDRIKTEYSSCPDFGIIFHEVSNGNRREYVDFITRDG 970
Query: 220 FLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSR 41
FLF+G +LC+P SLR+ + ++HGGGL GHFG+DKT A++ +F+ ++RDV +S+
Sbjct: 971 FLFRGTQLCIPRTSLREFLVWELHGGGLAGHFGKDKTIALVEDRFYWPSLKRDVAHLISQ 1030
Query: 40 CQNGKKLRERCR 5
C+ + + R R
Sbjct: 1031 CRTCQLAKARKR 1042
>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
Length = 1191
Score = 102 bits (253), Expect = 7e-20
Identities = 53/127 (41%), Positives = 74/127 (58%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQLRKYLLHNGFLF 212
N V DA S R +L++ + + GFD K LY D G I++EC K+ L + FLF
Sbjct: 831 NVVADALSRRYVLISTLTSKLLGFDQIKFLYANDSDFGEIFAECKLGPFEKFNLQDEFLF 890
Query: 211 KGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQN 32
K NKLCVP+CSLR+ ++ H GGL GHFG KT ++ + F+ MR+DV + S C
Sbjct: 891 KENKLCVPNCSLRELFVREAHYGGLMGHFGVPKTLEILSEHFYWPSMRKDVEKVCSYCLE 950
Query: 31 GKKLRER 11
K+ + R
Sbjct: 951 CKQAKSR 957
>gb|EMS54598.1| Transposon Ty3-G Gag-Pol polyprotein [Triticum urartu]
Length = 1704
Score = 102 bits (253), Expect = 7e-20
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Frame = -2
Query: 403 SEASNKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQLR--KYLL 230
S +N+V DA S R LLT+ E + G D K+LY D G +W + Q YL+
Sbjct: 581 SGITNRVADALSRRACLLTSFEAELSGMDQIKELYEGDEDFGHVWVKHARGQPLGDDYLM 640
Query: 229 HNGFLFKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRF 50
+G+LFK ++LC+P SL DK+ +++H L GH G+DKT A + ++F +++RD +F
Sbjct: 641 QDGYLFKNDRLCIPKSSLHDKLVRELHSSDLSGHVGRDKTIANLEARYFWPQLKRDAGKF 700
Query: 49 VSRC 38
V RC
Sbjct: 701 VQRC 704
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 102 bits (253), Expect = 7e-20
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = -2
Query: 391 NKVPDAFSSRTLLLTNMEISIEGFDSFKDLYPIDPFSGSIWSECVNDQL-RKYLLHNGFL 215
N + DA S R LLT ++ I G ++ KD Y D + C + + K+++++GF+
Sbjct: 1120 NIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFV 1179
Query: 214 FKGNKLCVPDCSLRDKITQDMHGGGLDGHFGQDKTFAMIGQKFF**KMRRDVCRFVSRCQ 35
F+ NKLC+P S+R + Q+ HGGGL GHFG KT ++ FF +MRRDV RFV+RC
Sbjct: 1180 FRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCA 1239
Query: 34 NGKKLRER 11
+K + R
Sbjct: 1240 TCQKAKSR 1247