BLASTX nr result

ID: Cocculus22_contig00018837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018837
         (519 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [...    66   4e-09
emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]    66   4e-09
ref|XP_002303080.1| hypothetical protein POPTR_0002s25190g [Popu...    64   2e-08
ref|XP_006437215.1| hypothetical protein CICLE_v10032230mg [Citr...    58   1e-06
ref|XP_006484827.1| PREDICTED: embryonic stem cell-specific 5-hy...    57   3e-06
ref|XP_004290142.1| PREDICTED: UPF0361 protein C3orf37 homolog i...    56   4e-06
ref|XP_004290141.1| PREDICTED: UPF0361 protein C3orf37 homolog i...    56   4e-06

>ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [Vitis vinifera]
           gi|296090568|emb|CBI40918.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 47/104 (45%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   ESEGSALAHLTKDLKQEEETTEFPDVQEDNKNPKLSISSYFQEEADEK--KCGIKRDHEQ 175
           + E +   +L K LKQE ET       ED     L        + DE+  K  IKRD E+
Sbjct: 300 QEESTWFTNLPKSLKQEPET-------EDKTG--LPFPGDHDSKCDEEATKLPIKRDFEE 350

Query: 176 LTVDSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGKS 307
            + DSK   D  EKP  SPV KK    KNAGD Q TLFSYFGKS
Sbjct: 351 FSADSKPNTDTVEKP--SPVTKKGKLNKNAGDKQPTLFSYFGKS 392


>emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]
          Length = 370

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 47/104 (45%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = +2

Query: 2   ESEGSALAHLTKDLKQEEETTEFPDVQEDNKNPKLSISSYFQEEADEK--KCGIKRDHEQ 175
           + E +   +L K LKQE ET       ED     L        + DE+  K  IKRD E+
Sbjct: 278 QEESTWFTNLPKSLKQEPET-------EDKTG--LPFPGDHDSKCDEEATKLPIKRDFEE 328

Query: 176 LTVDSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGKS 307
            + DSK   D  EKP  SPV KK    KNAGD Q TLFSYFGKS
Sbjct: 329 FSADSKPNTDTVEKP--SPVTKKGKLNKNAGDKQPTLFSYFGKS 370


>ref|XP_002303080.1| hypothetical protein POPTR_0002s25190g [Populus trichocarpa]
           gi|222844806|gb|EEE82353.1| hypothetical protein
           POPTR_0002s25190g [Populus trichocarpa]
          Length = 367

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = +2

Query: 5   SEGSALAHLTKDLKQEEETTEFPDVQEDNKNPKLSISSYFQ--EEADEKKCGIKRDHEQL 178
           + G +L    K +K+E E+ E  +     K     + S  +      E KC  KRD E+L
Sbjct: 267 THGKSLKLEPKSVKEENESEEKLETPCSAKTVDYDLKSELETFSHEGETKCKTKRDREEL 326

Query: 179 TVDSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGK 304
            VDSKL  D   KPR SP KKK  +LK+  D Q TL SYFGK
Sbjct: 327 -VDSKLKTDEIVKPRASPAKKK-ANLKSVDDKQPTLLSYFGK 366


>ref|XP_006437215.1| hypothetical protein CICLE_v10032230mg [Citrus clementina]
           gi|557539411|gb|ESR50455.1| hypothetical protein
           CICLE_v10032230mg [Citrus clementina]
          Length = 303

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 14  SALAHLTKDLKQEEETTEFPDVQ---EDNKNPKLSISSYFQEEADEKKCGIKRDHEQLTV 184
           +A  +L K +K E  T +    Q   E       S++S   +E D KK   KRD+++   
Sbjct: 205 TAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDE-DTKKELQKRDYKEFLA 263

Query: 185 DSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGK 304
           DSK ++D   K   SP+K+K G++K+AG+ Q TLFSYF K
Sbjct: 264 DSKPVIDGNNKLETSPLKRK-GNVKDAGEKQPTLFSYFSK 302


>ref|XP_006484827.1| PREDICTED: embryonic stem cell-specific
           5-hydroxymethylcytosine-binding protein-like isoform X1
           [Citrus sinensis]
          Length = 398

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 14  SALAHLTKDLKQEEETTEFPDVQ---EDNKNPKLSISSYFQEEADEKKCGIKRDHEQLTV 184
           +A  +L K +K E  T +    Q   E       S++S   +E D KK   KRD+++   
Sbjct: 300 TAQTNLPKSVKDEAVTADDIRTQSSVEKGDPDTKSVASVLSDE-DTKKELQKRDYKEFLA 358

Query: 185 DSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGK 304
           DSK ++D   K   SP+K+K G++K+AG+ Q TLFSY+ K
Sbjct: 359 DSKPVIDGNNKLETSPLKRK-GNVKDAGEKQPTLFSYYSK 397


>ref|XP_004290142.1| PREDICTED: UPF0361 protein C3orf37 homolog isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 348

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = +2

Query: 8   EGSALAHLTKDLKQEEETTEF---PDVQEDNKNPKLSISSYFQEEADEKKCGIKRDHEQL 178
           + S      + L +E ET E    P      ++ K S+S   QE+A +++   KRD+E+ 
Sbjct: 248 DSSVKTEFPESLNEEPETKEEKVQPSSTVKCEDSKSSVSILSQEDASKEQT--KRDYEEF 305

Query: 179 TVDSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGKS 307
             DSK L + ++K   +   KKK +LK + D Q TLFSYF KS
Sbjct: 306 LADSKPLPNESDKKSSASPAKKKVNLKTSHDKQPTLFSYFRKS 348


>ref|XP_004290141.1| PREDICTED: UPF0361 protein C3orf37 homolog isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 366

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = +2

Query: 8   EGSALAHLTKDLKQEEETTEF---PDVQEDNKNPKLSISSYFQEEADEKKCGIKRDHEQL 178
           + S      + L +E ET E    P      ++ K S+S   QE+A +++   KRD+E+ 
Sbjct: 266 DSSVKTEFPESLNEEPETKEEKVQPSSTVKCEDSKSSVSILSQEDASKEQT--KRDYEEF 323

Query: 179 TVDSKLLVDNTEKPRISPVKKKKGSLKNAGDNQSTLFSYFGKS 307
             DSK L + ++K   +   KKK +LK + D Q TLFSYF KS
Sbjct: 324 LADSKPLPNESDKKSSASPAKKKVNLKTSHDKQPTLFSYFRKS 366


Top