BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00018659
         (676 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   352   5e-95
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...   349   5e-94
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   342   5e-92
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   340   2e-91
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   340   3e-91
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   340   3e-91
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   340   3e-91
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]       338   1e-90
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   337   2e-90
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     337   3e-90
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    337   3e-90
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   336   5e-90
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...   335   6e-90
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     335   6e-90
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   335   8e-90
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   333   2e-89
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   332   5e-89
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    331   1e-88
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   328   1e-87
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   327   2e-87

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  352 bits (904), Expect = 5e-95
 Identities = 163/221 (73%), Positives = 198/221 (89%), Gaps = 1/221 (0%)
 Frame = -3

Query: 662  DSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSYY 483
            D VE+R+LVITPTKAYCLPP VELSNRVLRKYK+V+DRFLRVTF DEG+Q++NSNVL+YY
Sbjct: 412  DVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYY 471

Query: 482  IAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED- 306
            +APIV+D+TSNSF QKT IF RV +I+ +GF+LCGR+Y+FLAFS NQLRD SAWFF+E+ 
Sbjct: 472  VAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEER 531

Query: 305  SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFSD 126
            ++ V D++ WMGKFT+RN+AKC ARMG CFSSTYATIEVP EE+N DLPDI+RNGYVFSD
Sbjct: 532  NISVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSD 591

Query: 125  GIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            GIG++TP+L+ E+AEKL+L  +PPCAYQIR AGCKGV+A W
Sbjct: 592  GIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACW 632


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
            gi|462422376|gb|EMJ26639.1| hypothetical protein
            PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score =  349 bits (895), Expect = 5e-94
 Identities = 166/222 (74%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD  EVR+LVITPTKAYCLPP VELSNRVLRKYKEV+DRFLRVTF DEGMQK+NSNVL+Y
Sbjct: 407  DDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNY 466

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAE- 309
            Y+APIVK++TSNSF QKT++F R  TI+  GF+LCGR+YTFLAFS+NQLRD SAWFFAE 
Sbjct: 467  YVAPIVKEITSNSFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAEC 526

Query: 308  DSVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
             ++ V  I  WMGKF ++NVAKC ARMG CFSSTYAT+EV   E+N D+PDIKRNGYVFS
Sbjct: 527  VNISVGKITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPDIKRNGYVFS 585

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM+TP+L++E+AEKL+L  NPPCAYQIR AGCKGV+A W
Sbjct: 586  DGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACW 627


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  342 bits (878), Expect = 5e-92
 Identities = 159/222 (71%), Positives = 190/222 (85%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VE+R+L ITPT+AYCLPP VELSNRVLR+YK+++D+FLRVTF DEG+Q +N+N L+Y
Sbjct: 408  DDIVEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y APIV+D+TSNSFSQKT IF RV +I+  GF+LCGR+Y+FLAFS+NQLRD SAWFFAED
Sbjct: 468  YCAPIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
                VS IR WMGKFT+RN+AKC ARMG CFSSTYAT+EVP  E   DLPDI+RN Y+FS
Sbjct: 528  GKTSVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM+TP+L+ E+AEKL+L  NPPCAYQIR AGCKGV+A W
Sbjct: 588  DGIGMITPDLAKEVAEKLKLEVNPPCAYQIRYAGCKGVVACW 629


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  340 bits (872), Expect = 2e-91
 Identities = 156/222 (70%), Positives = 191/222 (86%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD  EVR+LVITPTKAYCLPP VELSNRVLRKYKEV+DRFLRVTF DEGMQ +NSNV++ 
Sbjct: 408  DDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNS 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y+APIVK++T N+F QKT ++ R+  I+  GFHLCGR+Y+FLAFS+NQLRD SAWFFAED
Sbjct: 468  YVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
             ++ +  I+ WMG+FT+RNVAKC ARMG CFSSTYAT+EVP  ++N++LPDI+RNGYVFS
Sbjct: 528  KTISIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIG +TP+L+ME+AEKL+L  +PP AYQIR  GCKGV+A W
Sbjct: 588  DGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKGVVACW 629


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score =  340 bits (871), Expect = 3e-91
 Identities = 160/223 (71%), Positives = 196/223 (87%), Gaps = 2/223 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLRKYK+++DRFLRVTF DEG+Q +N+NVLSY
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            +IAPIV+D+T NSFSQKT +F RV +I+  GF+LCGR+++FLAFS++QLRD SAWFF+ED
Sbjct: 468  FIAPIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
                V DI++WMG+FTD+N+AKC ARMG CFSSTYAT+EVP  E++ +LPDIKRNGYVFS
Sbjct: 528  GKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTAN-PPCAYQIRIAGCKGVIASW 3
            DGIG +TP+L+ME+A+KL+L  N PPCAYQIR AGCKGV+A W
Sbjct: 588  DGIGKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACW 630


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  340 bits (871), Expect = 3e-91
 Identities = 160/223 (71%), Positives = 196/223 (87%), Gaps = 2/223 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLRKYK+++DRFLRVTF DEG+Q +N+NVLSY
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            +IAPIV+D+T NSFSQKT +F RV +I+  GF+LCGR+++FLAFS++QLRD SAWFF+ED
Sbjct: 468  FIAPIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
                V DI++WMG+FTD+N+AKC ARMG CFSSTYAT+EVP  E++ +LPDIKRNGYVFS
Sbjct: 528  GKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTAN-PPCAYQIRIAGCKGVIASW 3
            DGIG +TP+L+ME+A+KL+L  N PPCAYQIR AGCKGV+A W
Sbjct: 588  DGIGKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACW 630


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  340 bits (871), Expect = 3e-91
 Identities = 160/222 (72%), Positives = 191/222 (86%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD  E+R+LVITPTKAYCLPP VELSNRVLRKYK+V+DRFLRVTF DEG+Q +NSN L+Y
Sbjct: 408  DDIAEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            + APIV+ +TS SF QKT IF RV +I+ +GF+LCGR+Y+FLAFS+NQLRD SAWFFAED
Sbjct: 468  FAAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
             ++ V  I+ WMGKFT++N+AKC ARMG CFSSTYATIEVP EE+N DLPDIKRNGY FS
Sbjct: 528  RNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM+TP+L+ E+AEKL+   +PPCAYQIR AGCKGV+A W
Sbjct: 588  DGIGMITPDLAREVAEKLKFDFDPPCAYQIRYAGCKGVVACW 629


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score =  338 bits (866), Expect = 1e-90
 Identities = 159/225 (70%), Positives = 192/225 (85%), Gaps = 1/225 (0%)
 Frame = -3

Query: 674  RSPDDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNV 495
            R  DD  EVR+LVITPT+AYCLPP VELSNRVLRKYKEVSDRFLRVTF DEGMQ +N NV
Sbjct: 401  RQLDDIAEVRRLVITPTRAYCLPPEVELSNRVLRKYKEVSDRFLRVTFMDEGMQTMNLNV 460

Query: 494  LSYYIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFF 315
            L+YY APIVK++TSNS SQKT +F RV +++  GF+LCG++Y+FLAFS+NQLRD SAWFF
Sbjct: 461  LTYYPAPIVKELTSNSTSQKTKVFKRVKSLLTDGFYLCGQRYSFLAFSSNQLRDRSAWFF 520

Query: 314  AED-SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGY 138
            AED  + V+ I++WMG+F +RN+AKC ARMG CFSSTYAT+EVP  E+N+DL +I+RN Y
Sbjct: 521  AEDGKITVNGIKKWMGRFNNRNIAKCAARMGQCFSSTYATVEVPLTEVNFDLEEIERNTY 580

Query: 137  VFSDGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            VFSDGIGM+TP+L+ E+AEKL+L  NPP AYQIR AGCKGV+A W
Sbjct: 581  VFSDGIGMITPDLAKEVAEKLKLDINPPSAYQIRYAGCKGVVACW 625


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  337 bits (864), Expect = 2e-90
 Identities = 160/222 (72%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLR YK V+DRFLRVTF DEGM+ LN NVL+Y
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+++TSNS  Q+T+IF RV +I+ KGFHLCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV  I  WMG+F++RNVAKC ARMG CFSSTYAT+EVP  E+N +LPDI+RNGYVFS
Sbjct: 528  PKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +L++E+AEKL L+ NPP AYQIR AGCKGV+A W
Sbjct: 588  DGIGMISADLAIEVAEKLHLSVNPPAAYQIRYAGCKGVVACW 629


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  337 bits (863), Expect = 3e-90
 Identities = 160/222 (72%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLR YK V+DRFLRVTF DEGM+ LN NVL+Y
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+++TSNS  Q+T+IF RV +I+ KGFHLCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV  I  WMG+F++RNVAKC ARMG CFSSTYAT+EVP  E+N +LPDI+RNGYVFS
Sbjct: 528  PKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +L++E+AEKL L+ NPP AYQIR AGCKGV+A W
Sbjct: 588  DGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACW 629


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  337 bits (863), Expect = 3e-90
 Identities = 160/222 (72%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLR YK V+DRFLRVTF DEGM+ LN NVL+Y
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+++TSNS  Q+T+IF RV +I+ KGFHLCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV  I  WMG+F++RNVAKC ARMG CFSSTYAT+EVP  E+N +LPDI+RNGYVFS
Sbjct: 528  PKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +L++E+AEKL L+ NPP AYQIR AGCKGV+A W
Sbjct: 588  DGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACW 629


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  336 bits (861), Expect = 5e-90
 Identities = 159/222 (71%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLR YK V+DRFLRVTF DEGM+ LN NVL+Y
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+++TSNS  Q+T+IF RV +I+ +GFHLCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV  I  WMG+F++RNVAKC ARMG CFSSTYAT+EVP  E+N +LPDI+RNGYVFS
Sbjct: 528  PKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +L++E+AEKL L+ NPP AYQIR AGCKGV+A W
Sbjct: 588  DGIGMISADLALEVAEKLHLSVNPPSAYQIRYAGCKGVVACW 629


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score =  335 bits (860), Expect = 6e-90
 Identities = 160/222 (72%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VE+R+LVITPTKAYCL P VELSNRVLRKYK+V+DRFLRVTF DEGMQ +N+NVL+Y
Sbjct: 407  DDIVEIRRLVITPTKAYCLLPEVELSNRVLRKYKDVADRFLRVTFMDEGMQIMNANVLTY 466

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+DVTS SFSQKT +F RV +I+  GF+LCGR+Y+FLAFS NQLRD +AWFFAED
Sbjct: 467  YNAAIVRDVTSTSFSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDRAAWFFAED 526

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              + V  I  WMGKFT+RN+AKC ARMG CFSSTYAT+EVP  ++N  LPDIKRNGY FS
Sbjct: 527  GKINVLQIIGWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSGQVNMHLPDIKRNGYDFS 586

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIG +TP+L+ME+A+KL+L  NPPCAYQIR AGCKGV+A W
Sbjct: 587  DGIGKITPDLAMEVAQKLKLDLNPPCAYQIRYAGCKGVVACW 628


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  335 bits (860), Expect = 6e-90
 Identities = 159/222 (71%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLR YK V+DRFLRVTF DEGM+ LN NVL+Y
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+++TSNS  Q+T+IF RV +I+ +GFHLCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV  I  WMG+F++RNVAKC ARMG CFSSTYAT+EVP  E+N +LPDI+RNGYVFS
Sbjct: 528  PKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +L++E+AEKL L+ NPP AYQIR AGCKGV+A W
Sbjct: 588  DGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAGCKGVVACW 629


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  335 bits (859), Expect = 8e-90
 Identities = 161/222 (72%), Positives = 187/222 (84%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VE+R+LVITPTKA+CL P VELSNRVLRKYKEV+DRFLRVTF DEGMQ +N+NVL+Y
Sbjct: 408  DDIVEIRRLVITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+DVTS  FSQKT +F RV +I+  GF+LCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAASIVRDVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
                V  I RWMGKFT+RN+AKC ARMG CFSSTYAT+EVP  E+N  LPDI+RNGYVFS
Sbjct: 528  GKTSVLQILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIG +TP+L+ E+A+KL+L  NPPCAYQIR AGCKGV+A W
Sbjct: 588  DGIGKITPDLAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACW 629


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  333 bits (855), Expect = 2e-89
 Identities = 161/222 (72%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLRKYK VSDRFLRVTF DEGM+ LN NVL+Y
Sbjct: 409  DDVVEVRRLVITPTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLNRNVLTY 468

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAE- 309
            Y A IV+++TS+S  Q+T IF RV +I+ KGF+LCGR+Y+FLAFS NQLRD SAWFFAE 
Sbjct: 469  YAATIVREITSSSNPQRTGIFQRVKSILSKGFYLCGRRYSFLAFSANQLRDRSAWFFAEA 528

Query: 308  DSVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV +I  WMGKF +RNVAKC ARMG CFSSTYAT+EV   E+N +LPDI+RNGYVFS
Sbjct: 529  PEIRVPNIINWMGKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFS 588

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +LS+E+A KLQL+ NPPCAYQIR AGCKGV+A W
Sbjct: 589  DGIGMMSADLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVACW 630


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  332 bits (852), Expect = 5e-89
 Identities = 160/222 (72%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLRKYK +SDRFLRVTF DEGM+ LN N L+Y
Sbjct: 408  DDVVEVRRLVITPTKAYCLPPTVELSNRVLRKYKHISDRFLRVTFMDEGMRNLNRNALTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAE- 309
            Y A IV+++TS+S  Q+T IF RV  I+ KGF+LCGR+Y+FLAFS NQLRD SAWFFAE 
Sbjct: 468  YAANIVREITSSSNPQRTGIFQRVKIIVNKGFYLCGRRYSFLAFSANQLRDRSAWFFAET 527

Query: 308  DSVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV+ I  WMGKF +RNVAKC ARMG CFSSTYAT+EV   E+N +LPDI+RNGYVFS
Sbjct: 528  PEIRVTSIINWMGKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM+T +LS+E+A KLQL+ NPPCAYQIR AGCKGV+A W
Sbjct: 588  DGIGMMTADLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVACW 629


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  331 bits (848), Expect = 1e-88
 Identities = 158/222 (71%), Positives = 187/222 (84%), Gaps = 1/222 (0%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITPTKAYCLPP VELSNRVLR YK V+DRFLRVTF DEGM+ LN NVL+Y
Sbjct: 408  DDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTY 467

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y A IV+++TSNS  Q+T+IF RV +I+ +GFHLCGR+Y+FLAFS NQLRD SAWFFAED
Sbjct: 468  YAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAED 527

Query: 305  -SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFS 129
              +RV  I  WMG+F++RNVAKC ARMG CFSSTYAT+EVP  E+N +LPDI+RNGYVFS
Sbjct: 528  PKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFS 587

Query: 128  DGIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            DGIGM++ +L++E+AEKL L  NPP AYQIR AG KGV+A W
Sbjct: 588  DGIGMISADLAIEVAEKLHLNVNPPSAYQIRYAGYKGVVACW 629


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571449461|ref|XP_006578148.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  328 bits (841), Expect = 1e-87
 Identities = 155/221 (70%), Positives = 186/221 (84%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LV+TP+KAYC+PP VELSNRVLRK++EVSD FLRVTF DEGMQ +N N L+Y
Sbjct: 410  DDIVEVRRLVVTPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNY 469

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y+APIVK++TSNSFSQKT I+ RV TI+ +GF+ CGR+Y+FLAFS+NQLRD SAWFFAED
Sbjct: 470  YVAPIVKEITSNSFSQKTKIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAED 529

Query: 305  SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFSD 126
             +R  DIR WMGKF  RNVAKC ARMG CFSSTYAT+EV   E+N  LPD++RN Y+FSD
Sbjct: 530  KIRCDDIRNWMGKFNQRNVAKCAARMGQCFSSTYATVEVAANEVNSMLPDVERNNYIFSD 589

Query: 125  GIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            GIG++T +L+ E+AEKL+L  N P AYQIR AG KGV+ASW
Sbjct: 590  GIGVITHDLAREVAEKLKLD-NVPSAYQIRYAGFKGVVASW 629


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  327 bits (839), Expect = 2e-87
 Identities = 155/221 (70%), Positives = 186/221 (84%)
 Frame = -3

Query: 665  DDSVEVRKLVITPTKAYCLPPVVELSNRVLRKYKEVSDRFLRVTFADEGMQKLNSNVLSY 486
            DD VEVR+LVITP+KAYC+PP VELSNRVLRK++EVSD FLRVTF DEGMQ +N N L+Y
Sbjct: 410  DDIVEVRRLVITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNY 469

Query: 485  YIAPIVKDVTSNSFSQKTSIFNRVNTIMRKGFHLCGRQYTFLAFSTNQLRDHSAWFFAED 306
            Y+APIVK++TSNSFSQ+T I+ RV TI+ +GF+ CGR+Y+FLAFS+NQLRD SAWFFAED
Sbjct: 470  YVAPIVKEITSNSFSQRTKIYKRVKTILEQGFYFCGRKYSFLAFSSNQLRDRSAWFFAED 529

Query: 305  SVRVSDIRRWMGKFTDRNVAKCTARMGLCFSSTYATIEVPFEEINYDLPDIKRNGYVFSD 126
             +R  DIR WMGKF  RNVAKC ARMG CFSSTYAT+EV   E+N  LPD++RN Y+FSD
Sbjct: 530  KIRCDDIRNWMGKFNQRNVAKCAARMGQCFSSTYATVEVAANEVNSMLPDVERNNYIFSD 589

Query: 125  GIGMLTPELSMEIAEKLQLTANPPCAYQIRIAGCKGVIASW 3
            GIG++T +L+ E+AEKL+L  N P AYQIR AG KGV+ASW
Sbjct: 590  GIGVITHDLAREVAEKLKLD-NVPSAYQIRYAGFKGVVASW 629