BLASTX nr result
ID: Cocculus22_contig00003472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00003472
(2538 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_740652.1| ribosomal protein S4 [Nandina domestica] gi|122... 392 e-106
ref|YP_004769716.1| ribosomal protein S4 [Magnolia kwangsiensis]... 387 e-104
ref|YP_002836092.1| ribosomal protein S4 [Megaleranthis saniculi... 387 e-104
ref|YP_001294186.1| ribosomal protein S4 [Buxus microphylla] gi|... 386 e-104
ref|YP_008081459.1| ribosomal protein S4 (chloroplast) [Trochode... 385 e-104
ref|YP_008081367.1| ribosomal protein S4 (chloroplast) [Tetracen... 385 e-104
ref|YP_008993178.1| ribosomal protein S4 (chloroplast) [Magnolia... 385 e-104
ref|YP_007474538.1| ribosomal protein S4 (chloroplast) [Magnolia... 385 e-104
ref|YP_007474372.1| ribosomal protein S4 (chloroplast) [Magnolia... 385 e-104
ref|YP_740204.1| ribosomal protein S4 [Liriodendron tulipifera] ... 384 e-103
gb|AHE41685.1| ribosomal protein S4 (chloroplast) [Hamamelis mol... 384 e-103
dbj|BAH70342.1| ribosomal protein S4 [Cercidiphyllum japonicum] ... 382 e-103
ref|YP_001004188.1| ribosomal protein S4 [Ranunculus macranthus]... 382 e-103
ref|YP_008963482.1| ribosomal protein S4 (chloroplast) [Penthoru... 381 e-103
gb|ABV65267.1| ribosomal protein S4, partial (chloroplast) [Berb... 381 e-103
gb|AHE41689.1| ribosomal protein S4 (chloroplast) [Itea chinensis] 381 e-102
gb|ADM92745.1| ribosomal protein S4 [Davidia involucrata] 381 e-102
gb|ADD29920.1| ribosomal protein S4 [Meliosma aff. cuneifolia Mo... 381 e-102
ref|NP_862756.1| ribosomal protein S4 [Calycanthus floridus var.... 380 e-102
gb|ABV65283.1| ribosomal protein S4 (chloroplast) [Cornus florida] 380 e-102
>ref|YP_740652.1| ribosomal protein S4 [Nandina domestica]
gi|122165959|sp|Q09FV9.1|RR4_NANDO RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|114054472|gb|ABI49865.1| ribosomal protein S4 [Nandina
domestica]
Length = 201
Score = 392 bits (1008), Expect = e-106
Identities = 195/201 (97%), Positives = 199/201 (99%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRP PGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPTPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_004769716.1| ribosomal protein S4 [Magnolia kwangsiensis]
gi|400256590|ref|YP_006576117.1| ribosomal protein S4
(chloroplast) [Magnolia denudata]
gi|570759840|ref|YP_008993264.1| ribosomal protein S4
(chloroplast) [Magnolia dealbata]
gi|570759927|ref|YP_008993350.1| ribosomal protein S4
(chloroplast) [Magnolia pyramidata]
gi|570760014|ref|YP_008993436.1| ribosomal protein S4
(chloroplast) [Magnolia kobus]
gi|570760101|ref|YP_008993522.1| ribosomal protein S4
(chloroplast) [Magnolia liliifera]
gi|570772198|ref|YP_008993780.1| ribosomal protein S4
(chloroplast) [Magnolia sinica]
gi|570772296|ref|YP_008993866.1| ribosomal protein S4
(chloroplast) [Magnolia sprengeri]
gi|573972376|ref|YP_008993694.1| ribosomal protein S4
(chloroplast) [Magnolia salicifolia]
gi|302424182|gb|ADL39058.1| ribosomal protein S4
[Magnolia kwangsiensis] gi|343887541|gb|AEM65220.1|
ribosomal protein S4 [Magnolia denudata]
gi|372862169|gb|AEX98253.1| ribosomal protein S4
(chloroplast) [Magnolia liliiflora]
gi|372862253|gb|AEX98336.1| ribosomal protein S4
(chloroplast) [Magnolia denudata]
Length = 201
Score = 387 bits (993), Expect = e-104
Identities = 190/201 (94%), Positives = 198/201 (98%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLL+YVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQ+SRALIQNY+DSSPHEEL KHLT HSSQYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKW+GLKINELLVVEYYSRQT
Sbjct: 181 SKWIGLKINELLVVEYYSRQT 201
>ref|YP_002836092.1| ribosomal protein S4 [Megaleranthis saniculifolia]
gi|226933884|gb|ACO92017.1| ribosomal protein S4
[Megaleranthis saniculifolia]
Length = 201
Score = 387 bits (993), Expect = e-104
Identities = 192/201 (95%), Positives = 196/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLG LPGLTSKRP PGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRPTPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYV IAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQ+SRALIQNYLDSSPHEELPKHLTLHSSQYKG VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSSPHEELPKHLTLHSSQYKGSVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_001294186.1| ribosomal protein S4 [Buxus microphylla]
gi|172048678|sp|A6MM38.1|RR4_BUXMI RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|146762287|gb|ABQ45251.1| ribosomal protein S4 [Buxus
microphylla]
Length = 201
Score = 386 bits (992), Expect = e-104
Identities = 192/201 (95%), Positives = 197/201 (98%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT +DEQKSRALIQNYLDSSPHEELPKHLTLHS QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_008081459.1| ribosomal protein S4 (chloroplast) [Trochodendron aralioides]
gi|157689576|gb|ABV65344.1| ribosomal protein S4
(chloroplast) [Trochodendron aralioides]
gi|479279298|gb|AGJ72151.1| ribosomal protein S4
(chloroplast) [Trochodendron aralioides]
Length = 201
Score = 385 bits (990), Expect = e-104
Identities = 191/201 (95%), Positives = 196/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKY+RIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT RDEQKSRALIQNY DSSPHEELPKHLTLHS QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITARDEQKSRALIQNYFDSSPHEELPKHLTLHSFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_008081367.1| ribosomal protein S4 (chloroplast) [Tetracentron sinense]
gi|479279205|gb|AGJ72059.1| ribosomal protein S4
(chloroplast) [Tetracentron sinense]
Length = 201
Score = 385 bits (989), Expect = e-104
Identities = 191/201 (95%), Positives = 196/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSR GKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRPGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKY+RIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT RDEQKSRALIQNYLDSSPHEELPKHLTLHS QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_008993178.1| ribosomal protein S4 (chloroplast) [Magnolia cathcartii]
gi|570760188|ref|YP_008993608.1| ribosomal protein S4
(chloroplast) [Magnolia odora]
Length = 201
Score = 385 bits (988), Expect = e-104
Identities = 189/201 (94%), Positives = 198/201 (98%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLL+YVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IV+IPSYRCKP+DIITTRDEQ+SRALIQNY+DSSPHEEL KHLT HSSQYKG+VNQIID
Sbjct: 121 RIVNIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKW+GLKINELLVVEYYSRQT
Sbjct: 181 SKWIGLKINELLVVEYYSRQT 201
>ref|YP_007474538.1| ribosomal protein S4 (chloroplast) [Magnolia grandiflora]
gi|372862845|gb|AEX98921.1| ribosomal protein S4
(chloroplast) [Magnolia grandiflora]
gi|372863015|gb|AEX99089.1| ribosomal protein S4
(chloroplast) [Magnolia grandiflora]
Length = 201
Score = 385 bits (988), Expect = e-104
Identities = 189/200 (94%), Positives = 197/200 (98%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLL+YVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQ+SRALIQNY+DSSPHEEL KHLT HSSQYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQ 1361
SKW+GLKINELLVVEYYSRQ
Sbjct: 181 SKWIGLKINELLVVEYYSRQ 200
>ref|YP_007474372.1| ribosomal protein S4 (chloroplast) [Magnolia officinalis]
gi|452848773|ref|YP_007474454.1| ribosomal protein S4
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|619275738|ref|YP_009026883.1| ribosomal protein S4
[Magnolia tripetala] gi|372862423|gb|AEX98504.1|
ribosomal protein S4 (chloroplast) [Magnolia officinalis]
gi|372862506|gb|AEX98586.1| ribosomal protein S4
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862591|gb|AEX98670.1| ribosomal protein S4
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862676|gb|AEX98754.1| ribosomal protein S4
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|608608406|gb|AHW51960.1| ribosomal protein S4
[Magnolia tripetala]
Length = 201
Score = 385 bits (988), Expect = e-104
Identities = 189/201 (94%), Positives = 198/201 (98%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLL+YVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQ+SRALIQN++DSSPHEEL KHLT HSSQYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQRSRALIQNHIDSSPHEELAKHLTFHSSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKW+GLKINELLVVEYYSRQT
Sbjct: 181 SKWIGLKINELLVVEYYSRQT 201
>ref|YP_740204.1| ribosomal protein S4 [Liriodendron tulipifera]
gi|122221293|sp|Q0G9L7.1|RR4_LIRTU RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|113200996|gb|ABI32511.1| ribosomal protein S4
[Liriodendron tulipifera]
Length = 201
Score = 384 bits (986), Expect = e-103
Identities = 189/201 (94%), Positives = 197/201 (98%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLL+YVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTR EQ+SRALIQNY+DSSPHEEL KHLT HSSQYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRGEQRSRALIQNYIDSSPHEELAKHLTFHSSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKW+GLKINELLVVEYYSRQT
Sbjct: 181 SKWIGLKINELLVVEYYSRQT 201
>gb|AHE41685.1| ribosomal protein S4 (chloroplast) [Hamamelis mollis]
Length = 201
Score = 384 bits (985), Expect = e-103
Identities = 190/201 (94%), Positives = 195/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRTGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKY+RIAGKAKGSTGQ+LLQLLEMRLDNILFRLGM STIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYIRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMTSTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT RDEQKSRALIQNYLDSSPHEELPKHLTLH QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>dbj|BAH70342.1| ribosomal protein S4 [Cercidiphyllum japonicum]
gi|239582602|dbj|BAH70347.1| ribosomal protein S4
[Cercidiphyllum japonicum] gi|239582623|dbj|BAH70352.1|
ribosomal protein S4 [Cercidiphyllum japonicum]
Length = 201
Score = 382 bits (980), Expect = e-103
Identities = 190/201 (94%), Positives = 196/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNH+HIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHKHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IV+IPSYRCKP+DIIT RDEQKSRALIQNYLDSSPHEELPKHLTLH QYKG+VNQIID
Sbjct: 121 GIVNIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_001004188.1| ribosomal protein S4 [Ranunculus macranthus]
gi|69216108|gb|AAZ03892.1| ribosomal protein S4
[Ranunculus macranthus] gi|85540806|gb|ABC70758.1|
ribosomal protein S4 [Ranunculus macranthus]
Length = 201
Score = 382 bits (980), Expect = e-103
Identities = 189/201 (94%), Positives = 194/201 (96%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLG LPGLTSKRP PGSDLRNQSR GKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGVLPGLTSKRPTPGSDLRNQSRPGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYV IAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVHIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQKSRALIQN++DSSPHEELPKHLTLH SQYKG VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQKSRALIQNFMDSSPHEELPKHLTLHPSQYKGSVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|YP_008963482.1| ribosomal protein S4 (chloroplast) [Penthorum chinense]
gi|403226783|gb|AFR25662.1| ribosomal protein S4
(chloroplast) [Penthorum chinense]
Length = 201
Score = 381 bits (979), Expect = e-103
Identities = 189/201 (94%), Positives = 196/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
HIVDIPSYRCKP+DIIT +DEQKSRA+IQNYLDSSP EELPKHLTLH QYKG+VNQIID
Sbjct: 121 HIVDIPSYRCKPRDIITAKDEQKSRAMIQNYLDSSPPEELPKHLTLHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
+KWVGLKINELLVVEYYSRQT
Sbjct: 181 NKWVGLKINELLVVEYYSRQT 201
>gb|ABV65267.1| ribosomal protein S4, partial (chloroplast) [Berberidopsis corallina]
Length = 201
Score = 381 bits (979), Expect = e-103
Identities = 189/201 (94%), Positives = 195/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLT+KRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT RDEQKS+ALIQNYLDSSPHEELP HLTLH QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITARDEQKSKALIQNYLDSSPHEELPNHLTLHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>gb|AHE41689.1| ribosomal protein S4 (chloroplast) [Itea chinensis]
Length = 201
Score = 381 bits (978), Expect = e-102
Identities = 190/201 (94%), Positives = 195/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRP GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPIVGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT RDEQKSRALIQNYLDSSPHEELPKHLTLH QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITARDEQKSRALIQNYLDSSPHEELPKHLTLHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
+KWVGLKINELLVVEYYSRQT
Sbjct: 181 TKWVGLKINELLVVEYYSRQT 201
>gb|ADM92745.1| ribosomal protein S4 [Davidia involucrata]
Length = 201
Score = 381 bits (978), Expect = e-102
Identities = 190/201 (94%), Positives = 195/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLT+KRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIIT RDEQKSRALIQN LDSSPHEELPKHLTLH QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITARDEQKSRALIQNSLDSSPHEELPKHLTLHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>gb|ADD29920.1| ribosomal protein S4 [Meliosma aff. cuneifolia Moore 333]
Length = 201
Score = 381 bits (978), Expect = e-102
Identities = 188/201 (93%), Positives = 196/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTG++LLQLLEMRLDNILFRLGM+STIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGKVLLQLLEMRLDNILFRLGMSSTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRC P+D+IT +DEQKSRALIQNYLDSSPHEELPKHLTLHS QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCNPRDLITAKDEQKSRALIQNYLDSSPHEELPKHLTLHSFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>ref|NP_862756.1| ribosomal protein S4 [Calycanthus floridus var. glaucus]
gi|52783277|sp|Q7YJX0.1|RR4_CALFG RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|32399381|emb|CAD28723.1| ribosomal protein S4''
[Calycanthus floridus var. glaucus]
Length = 201
Score = 380 bits (975), Expect = e-102
Identities = 188/201 (93%), Positives = 195/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLTSKRPR GSDLRNQSRSGK+SQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTSKRPRSGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLL+YVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLRYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKP+DIITTRDEQ+SRALIQNYLDS HEELPKHLT H SQYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPRDIITTRDEQRSRALIQNYLDSPSHEELPKHLTFHPSQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201
>gb|ABV65283.1| ribosomal protein S4 (chloroplast) [Cornus florida]
Length = 201
Score = 380 bits (975), Expect = e-102
Identities = 189/201 (94%), Positives = 195/201 (97%)
Frame = -3
Query: 1960 MSRYRGPRFKKIRRLGALPGLTSKRPRPGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 1781
MSRYRGPRFKKIRRLGALPGLT+KRPR GSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL
Sbjct: 1 MSRYRGPRFKKIRRLGALPGLTNKRPRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYGL 60
Query: 1780 TERQLLKYVRIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILING 1601
TERQLLKYVRIAGKAKGSTGQ+LLQLLEMRLDNILFRLGMASTIPGARQLVNHRHIL+NG
Sbjct: 61 TERQLLKYVRIAGKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNG 120
Query: 1600 HIVDIPSYRCKPQDIITTRDEQKSRALIQNYLDSSPHEELPKHLTLHSSQYKGVVNQIID 1421
IVDIPSYRCKPQDIIT RDEQKSRALIQN L+SSPHEELPKHLT+H QYKG+VNQIID
Sbjct: 121 RIVDIPSYRCKPQDIITARDEQKSRALIQNSLESSPHEELPKHLTVHPFQYKGLVNQIID 180
Query: 1420 SKWVGLKINELLVVEYYSRQT 1358
SKWVGLKINELLVVEYYSRQT
Sbjct: 181 SKWVGLKINELLVVEYYSRQT 201