BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00003448
         (1281 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509739.1| replication factor C / DNA polymerase III ga...   578   e-162
ref|XP_007040141.1| Replication factor C 2 isoform 1 [Theobroma ...   578   e-162
ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-li...   577   e-162
gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]       575   e-161
ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-li...   575   e-161
ref|XP_007200386.1| hypothetical protein PRUPE_ppa008426mg [Prun...   574   e-161
ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutr...   573   e-161
ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [V...   573   e-161
ref|XP_007040142.1| Replication factor C / DNA polymerase III ga...   572   e-160
ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-li...   571   e-160
ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [A...   570   e-160
gb|AFK40126.1| unknown [Medicago truncatula]                          570   e-160
ref|XP_007155555.1| hypothetical protein PHAVU_003G211700g [Phas...   570   e-160
ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arab...   569   e-159
ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-li...   567   e-159
ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana] g...   565   e-158
ref|XP_006477417.1| PREDICTED: replication factor C subunit 2-li...   565   e-158
ref|XP_006440559.1| hypothetical protein CICLE_v10021080mg [Citr...   564   e-158
ref|XP_002304476.1| replication factor C 40 kDa family protein [...   564   e-158
ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-li...   564   e-158

>ref|XP_002509739.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223549638|gb|EEF51126.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 333

 Score =  578 bits (1491), Expect = e-162
 Identities = 287/320 (89%), Positives = 301/320 (94%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRP+K+ D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL
Sbjct: 13   YDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 72

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQA
Sbjct: 73   LGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQA 132

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRL+IVVQAEKVPY
Sbjct: 133  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLIIVVQAEKVPY 192

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVR+++EG
Sbjct: 193  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRHVMEG 252

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            K+DDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 253  KYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 312

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VR+TA+A
Sbjct: 313  YLQLCGLLAKLALVRDTARA 332


>ref|XP_007040141.1| Replication factor C 2 isoform 1 [Theobroma cacao]
            gi|590677884|ref|XP_007040143.1| Replication factor C 2
            isoform 1 [Theobroma cacao] gi|508777386|gb|EOY24642.1|
            Replication factor C 2 isoform 1 [Theobroma cacao]
            gi|508777388|gb|EOY24644.1| Replication factor C 2
            isoform 1 [Theobroma cacao]
          Length = 332

 Score =  578 bits (1489), Expect = e-162
 Identities = 289/321 (90%), Positives = 298/321 (92%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GYD+PWVEKYRP KV+D+VGNEDAVSRLQVIA DGNMPNLILSGPPGTGKTTSILALAHE
Sbjct: 11   GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 71   LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VV AEKVP
Sbjct: 131  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQENVFKVCDQPHPLHVKNMVR +LE
Sbjct: 191  YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
            G+FDDAC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD   
Sbjct: 251  GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 310

Query: 1023 XXXXXXXXXXXXXXVRETAKA 1085
                          VRETAKA
Sbjct: 311  SYLQLCGLLAKFSLVRETAKA 331


>ref|XP_004147970.1| PREDICTED: replication factor C subunit 2-like [Cucumis sativus]
            gi|449494241|ref|XP_004159490.1| PREDICTED: replication
            factor C subunit 2-like [Cucumis sativus]
          Length = 331

 Score =  577 bits (1487), Expect = e-162
 Identities = 285/320 (89%), Positives = 300/320 (93%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YDIPWVEKYRP KVTD+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL
Sbjct: 11   YDIPWVEKYRPNKVTDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 70

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NYKE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMT+GAQQA
Sbjct: 71   LGPNYKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTTGAQQA 130

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSN+TRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLM+V+QAEKVPY
Sbjct: 131  LRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLTDQEILGRLMVVIQAEKVPY 190

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQ+NVFKVCDQPHPLHVKN+VRN+LEG
Sbjct: 191  VPEGLEAIIFTADGDMRQALNNLQATHSGFRFVNQDNVFKVCDQPHPLHVKNVVRNVLEG 250

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDAC+GL+QLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 251  KFDDACTGLRQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 310

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VRETAKA
Sbjct: 311  YLQLCGLLAKLSMVRETAKA 330


>gb|EXC34102.1| Replication factor C subunit 2 [Morus notabilis]
          Length = 330

 Score =  575 bits (1482), Expect = e-161
 Identities = 288/321 (89%), Positives = 297/321 (92%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GYDIPWVEKYRPT V D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE
Sbjct: 9    GYDIPWVEKYRPTNVIDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 68

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NY+E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 69   LLGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 128

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEIL RLM+VV AEKVP
Sbjct: 129  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILVRLMVVVDAEKVP 188

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQALNNLQATYSGFRF+NQENVFKVCDQPHPLHVKNMVR++LE
Sbjct: 189  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFLNQENVFKVCDQPHPLHVKNMVRHVLE 248

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
            GKFDDACSGLKQLYDLGYSPTDIITT FRIIKNYDMAEYLKL+FMKETGFAHMRICD   
Sbjct: 249  GKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLQFMKETGFAHMRICDGVG 308

Query: 1023 XXXXXXXXXXXXXXVRETAKA 1085
                          VRETAKA
Sbjct: 309  SYLQLCGLLAKLSLVRETAKA 329


>ref|XP_004515806.1| PREDICTED: replication factor C subunit 2-like [Cicer arietinum]
          Length = 332

 Score =  575 bits (1481), Expect = e-161
 Identities = 286/320 (89%), Positives = 298/320 (93%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPN+ILSGP GTGKTTSILALAHEL
Sbjct: 12   YDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNIILSGPSGTGKTTSILALAHEL 71

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQA
Sbjct: 72   LGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQA 131

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VVQAEKVPY
Sbjct: 132  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPY 191

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMVRN++EG
Sbjct: 192  VPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEG 251

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
             FD+ACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 252  NFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 311

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VRETAKA
Sbjct: 312  YLQMCGLLAKLSLVRETAKA 331


>ref|XP_007200386.1| hypothetical protein PRUPE_ppa008426mg [Prunus persica]
            gi|462395786|gb|EMJ01585.1| hypothetical protein
            PRUPE_ppa008426mg [Prunus persica]
          Length = 332

 Score =  574 bits (1479), Expect = e-161
 Identities = 288/320 (90%), Positives = 296/320 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YDIPWVEKYRP+ V D+VGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 12   YDIPWVEKYRPSNVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 71

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQA
Sbjct: 72   LGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQA 131

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSDQEILGRLMIVVQAEKVPY
Sbjct: 132  LRRTMEIYSNSTRFALACNVSSKIIEPIQSRCALVRFSRLSDQEILGRLMIVVQAEKVPY 191

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQENVFKVCDQPHPLHVKNMV N+LEG
Sbjct: 192  VPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVCNVLEG 251

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDACSGLKQLYDLGYSPTDIITT FRIIKNYDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 252  KFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 311

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         +RETAKA
Sbjct: 312  YLQLCGLLAKLSLIRETAKA 331


>ref|XP_006391776.1| hypothetical protein EUTSA_v10023584mg [Eutrema salsugineum]
            gi|557088282|gb|ESQ29062.1| hypothetical protein
            EUTSA_v10023584mg [Eutrema salsugineum]
          Length = 333

 Score =  573 bits (1478), Expect = e-161
 Identities = 284/321 (88%), Positives = 299/321 (93%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GY+IPWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 12   GYEIPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 71

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQ
Sbjct: 72   LLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRT+EIYSNSTRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLM+VVQAE VP
Sbjct: 132  ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQEILGRLMVVVQAENVP 191

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            ++PEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQENVFKVCDQPHPLHVKNMVRN+LE
Sbjct: 192  FIPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLE 251

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
             KFDDAC G+KQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD   
Sbjct: 252  SKFDDACHGMKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311

Query: 1023 XXXXXXXXXXXXXXVRETAKA 1085
                          VRETAKA
Sbjct: 312  SYLQLCGLLAKLAVVRETAKA 332


>ref|XP_002283246.1| PREDICTED: replication factor C subunit 2 [Vitis vinifera]
            gi|297742576|emb|CBI34725.3| unnamed protein product
            [Vitis vinifera]
          Length = 330

 Score =  573 bits (1478), Expect = e-161
 Identities = 286/320 (89%), Positives = 297/320 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRPTKV D+VGNED VSRLQVIARDGNMPNLILSGPPGTGKTTS+LALAHEL
Sbjct: 10   YDMPWVEKYRPTKVADIVGNEDTVSRLQVIARDGNMPNLILSGPPGTGKTTSVLALAHEL 69

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LGANY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLP G HKI+ILDEADSMT+GAQQA
Sbjct: 70   LGANYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGSHKIVILDEADSMTTGAQQA 129

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VV+AEKVP+
Sbjct: 130  LRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVEAEKVPF 189

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRN+LEG
Sbjct: 190  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEG 249

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDAC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 250  KFDDACYGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 309

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VRETAKA
Sbjct: 310  YLQLCGLLAKLAVVRETAKA 329


>ref|XP_007040142.1| Replication factor C / DNA polymerase III gamma-tau subunit isoform 2
            [Theobroma cacao] gi|508777387|gb|EOY24643.1| Replication
            factor C / DNA polymerase III gamma-tau subunit isoform 2
            [Theobroma cacao]
          Length = 393

 Score =  572 bits (1474), Expect = e-160
 Identities = 282/297 (94%), Positives = 291/297 (97%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GYD+PWVEKYRP KV+D+VGNEDAVSRLQVIA DGNMPNLILSGPPGTGKTTSILALAHE
Sbjct: 11   GYDVPWVEKYRPNKVSDIVGNEDAVSRLQVIAHDGNMPNLILSGPPGTGKTTSILALAHE 70

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQ
Sbjct: 71   LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQ 130

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VV AEKVP
Sbjct: 131  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRLMVVVDAEKVP 190

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQENVFKVCDQPHPLHVKNMVR +LE
Sbjct: 191  YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNMVRYVLE 250

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD 1013
            G+FDDAC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD
Sbjct: 251  GRFDDACLGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD 307


>ref|XP_004298747.1| PREDICTED: replication factor C subunit 2-like [Fragaria vesca subsp.
            vesca]
          Length = 329

 Score =  571 bits (1472), Expect = e-160
 Identities = 286/320 (89%), Positives = 297/320 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRPTKV+D+VGNEDAVSRLQVIARDGNMPNLIL+GPPG GKTTSILALAHEL
Sbjct: 9    YDMPWVEKYRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGIGKTTSILALAHEL 68

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NY+E VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMTSGAQQA
Sbjct: 69   LGPNYREGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQA 128

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRL+DQEILGRLMIVVQAEKVPY
Sbjct: 129  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDQEILGRLMIVVQAEKVPY 188

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQAT SGFRFVNQENVFKVCDQPHPLHVKNMV NILEG
Sbjct: 189  VPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVKNMVHNILEG 248

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDACSGLKQLYD+GYSPTDIITT FRIIKNYDMAE+LKLEFMKETGFAHMRICD    
Sbjct: 249  KFDDACSGLKQLYDMGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAHMRICDGVGS 308

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VR+TAKA
Sbjct: 309  YLQLCGLLAKLSLVRDTAKA 328


>ref|XP_006857848.1| hypothetical protein AMTR_s00069p00063160 [Amborella trichopoda]
            gi|548861950|gb|ERN19315.1| hypothetical protein
            AMTR_s00069p00063160 [Amborella trichopoda]
          Length = 331

 Score =  570 bits (1469), Expect = e-160
 Identities = 283/322 (87%), Positives = 299/322 (92%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GY++PWVEKYRP KV +VVGN+DAVSRLQVIARDGNMPNLILSGPPGTGKT+SILALAHE
Sbjct: 10   GYELPWVEKYRPVKVAEVVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTSSILALAHE 69

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG N+KEAVLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKII+LDEADSMT+GAQQ
Sbjct: 70   LLGTNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLSPGRHKIIVLDEADSMTTGAQQ 129

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLMIVV AEKVP
Sbjct: 130  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMIVVDAEKVP 189

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEA+IFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRN+++
Sbjct: 190  YVPEGLEAVIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVID 249

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
            GKF++ACSGLKQLYDLGYSPTDIITTLFRIIKNYDM EYLKLEF+KETGFAHMRICD   
Sbjct: 250  GKFEEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMPEYLKLEFLKETGFAHMRICDGVG 309

Query: 1023 XXXXXXXXXXXXXXVRETAKAV 1088
                          VRETAKAV
Sbjct: 310  SLLQLCGLLAKLSRVRETAKAV 331


>gb|AFK40126.1| unknown [Medicago truncatula]
          Length = 333

 Score =  570 bits (1469), Expect = e-160
 Identities = 282/320 (88%), Positives = 297/320 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL
Sbjct: 13   YDVPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 72

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NY+EAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQA
Sbjct: 73   LGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQA 132

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VVQAEKVPY
Sbjct: 133  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVPY 192

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQ LNNLQAT+SGF+FVNQ NVFKVCDQPHPLHVKNMVRN++EG
Sbjct: 193  VPEGLEAIIFTADGDMRQGLNNLQATFSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEG 252

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
             FD+ACSGLKQLYDLGYSPTDIITTLFRIIK+YDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 253  NFDEACSGLKQLYDLGYSPTDIITTLFRIIKSYDMAEYLKLEFMKETGFAHMRICDGVGS 312

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VR+TA A
Sbjct: 313  YLQMCGLLAKFALVRDTANA 332


>ref|XP_007155555.1| hypothetical protein PHAVU_003G211700g [Phaseolus vulgaris]
            gi|561028909|gb|ESW27549.1| hypothetical protein
            PHAVU_003G211700g [Phaseolus vulgaris]
          Length = 330

 Score =  570 bits (1468), Expect = e-160
 Identities = 285/321 (88%), Positives = 295/321 (91%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRP KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL
Sbjct: 10   YDVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 69

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG N KE VLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKI+ILDEADSMT+GAQQA
Sbjct: 70   LGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTTGAQQA 129

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACNTS+KIIEPIQSRCA+VRFSRL DQEILGRLMIVVQAEKVPY
Sbjct: 130  LRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMIVVQAEKVPY 189

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMVRN++EG
Sbjct: 190  VPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIEG 249

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
             FD+ACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD    
Sbjct: 250  NFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVGS 309

Query: 1026 XXXXXXXXXXXXXVRETAKAV 1088
                         VRE AKAV
Sbjct: 310  YLQLCGLLAKLSLVRENAKAV 330


>ref|XP_002886430.1| hypothetical protein ARALYDRAFT_475032 [Arabidopsis lyrata subsp.
            lyrata] gi|297332271|gb|EFH62689.1| hypothetical protein
            ARALYDRAFT_475032 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  569 bits (1466), Expect = e-159
 Identities = 283/321 (88%), Positives = 297/321 (92%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GY+ PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE
Sbjct: 13   GYNNPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 72

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQ
Sbjct: 73   LLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 132

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRT+EIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQ+ILGRL++VV+AE VP
Sbjct: 133  ALRRTIEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQQILGRLLVVVEAENVP 192

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQALNNLQAT+SGFRFVNQENVFKVCDQPHPLHVKN+VRN+LE
Sbjct: 193  YVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHVKNIVRNVLE 252

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
             KFDDAC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD   
Sbjct: 253  SKFDDACHGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 312

Query: 1023 XXXXXXXXXXXXXXVRETAKA 1085
                           RETAKA
Sbjct: 313  SYLQLCGLLAKLSIARETAKA 333


>ref|XP_003525721.1| PREDICTED: replication factor C subunit 2-like [Glycine max]
          Length = 331

 Score =  567 bits (1461), Expect = e-159
 Identities = 285/322 (88%), Positives = 298/322 (92%), Gaps = 1/322 (0%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YD+PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL
Sbjct: 10   YDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 69

Query: 306  LGA-NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LG  N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTL PGRHKI+ILDEADSMT+GAQQ
Sbjct: 70   LGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEADSMTTGAQQ 129

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRTMEIYSN+TRFALACNTS+KIIEPIQSRCA+VRFSRLSDQEILGRLM+VVQAEKVP
Sbjct: 130  ALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVQAEKVP 189

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQALNNLQATYSGF+FVNQ NVFKVCDQPHPLHVKNMVRN++E
Sbjct: 190  YVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVKNMVRNVIE 249

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
            G FD+ACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD   
Sbjct: 250  GNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 309

Query: 1023 XXXXXXXXXXXXXXVRETAKAV 1088
                          VRETAKAV
Sbjct: 310  SYLQLCGLLAKLSLVRETAKAV 331


>ref|NP_176504.1| replication factor C 2 [Arabidopsis thaliana]
            gi|75169912|sp|Q9CAM7.1|RFC2_ARATH RecName:
            Full=Replication factor C subunit 2; Short=AtRFC2;
            AltName: Full=Activator 1 subunit 2; AltName:
            Full=Protein EMBRYO DEFECTIVE 2811
            gi|12323266|gb|AAG51618.1|AC010795_22 replication factor,
            putative; 74998-73295 [Arabidopsis thaliana]
            gi|182623790|gb|ACB88833.1| At1g63160 [Arabidopsis
            thaliana] gi|332195942|gb|AEE34063.1| replication factor
            C 2 [Arabidopsis thaliana]
          Length = 333

 Score =  565 bits (1456), Expect = e-158
 Identities = 282/321 (87%), Positives = 296/321 (92%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            GY+ PWVEKYRP+KV D+VGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE
Sbjct: 12   GYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 71

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHK++ILDEADSMTSGAQQ
Sbjct: 72   LLGTNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILDEADSMTSGAQQ 131

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRT+EIYSNSTRFALACNTS+KIIEPIQSRCA+VRFSRLSDQ+ILGRL++VV AEKVP
Sbjct: 132  ALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAEKVP 191

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQENVFKVCDQPHPLHVKN+VRN+LE
Sbjct: 192  YVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRNVLE 251

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
             KFD AC GLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICD   
Sbjct: 252  SKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDGVG 311

Query: 1023 XXXXXXXXXXXXXXVRETAKA 1085
                          VRETAKA
Sbjct: 312  SYLQLCGLLAKLSIVRETAKA 332


>ref|XP_006477417.1| PREDICTED: replication factor C subunit 2-like [Citrus sinensis]
          Length = 331

 Score =  565 bits (1455), Expect = e-158
 Identities = 279/321 (86%), Positives = 296/321 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YDIPWVEKYRPTKV D+VGN DAV+RL +IARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11   YDIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHEL 70

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NY+EAV+ELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK+++LDEADSMT+GAQQA
Sbjct: 71   LGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQA 130

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSD+EIL RLM+VVQ EKVPY
Sbjct: 131  LRRTMEIYSNSTRFALACNVSSKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPY 190

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRN+LEG
Sbjct: 191  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEG 250

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNY+MAE+LKLEFMKE GFAHMRICD    
Sbjct: 251  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYEMAEHLKLEFMKEAGFAHMRICDGVGS 310

Query: 1026 XXXXXXXXXXXXXVRETAKAV 1088
                         VRETAKAV
Sbjct: 311  YLQLCGLLAKLSIVRETAKAV 331


>ref|XP_006440559.1| hypothetical protein CICLE_v10021080mg [Citrus clementina]
            gi|557542821|gb|ESR53799.1| hypothetical protein
            CICLE_v10021080mg [Citrus clementina]
          Length = 331

 Score =  564 bits (1454), Expect = e-158
 Identities = 279/321 (86%), Positives = 296/321 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YDIPWVEKYRPTKV D+VGN DAV+RL +IARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 11   YDIPWVEKYRPTKVCDIVGNLDAVARLGIIARDGNMPNLILAGPPGTGKTTSILALAHEL 70

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG NY+EAV+ELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HK+++LDEADSMT+GAQQA
Sbjct: 71   LGPNYREAVMELNASDDRGIDVVRNKIKMFAQKKVTLPPGKHKVVVLDEADSMTAGAQQA 130

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACN SSKIIEPIQSRCA+VRFSRLSD+EIL RLM+VVQ EKVPY
Sbjct: 131  LRRTMEIYSNSTRFALACNISSKIIEPIQSRCAIVRFSRLSDEEILSRLMVVVQEEKVPY 190

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRN+LEG
Sbjct: 191  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNVLEG 250

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNY+MAE+LKLEFMKE GFAHMRICD    
Sbjct: 251  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYEMAEHLKLEFMKEAGFAHMRICDGVGS 310

Query: 1026 XXXXXXXXXXXXXVRETAKAV 1088
                         VRETAKAV
Sbjct: 311  YLQLCGLLAKLSIVRETAKAV 331


>ref|XP_002304476.1| replication factor C 40 kDa family protein [Populus trichocarpa]
            gi|222841908|gb|EEE79455.1| replication factor C 40 kDa
            family protein [Populus trichocarpa]
          Length = 330

 Score =  564 bits (1454), Expect = e-158
 Identities = 281/320 (87%), Positives = 295/320 (92%)
 Frame = +3

Query: 126  YDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHEL 305
            YDIPWVEKYRP KV D+VGN+DAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHEL
Sbjct: 10   YDIPWVEKYRPNKVADIVGNQDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHEL 69

Query: 306  LGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQA 485
            LG N KEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPG+HKI+ILDEADSMTSGAQQA
Sbjct: 70   LGPNSKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGQHKIVILDEADSMTSGAQQA 129

Query: 486  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVPY 665
            LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRFSRLSDQEILGRLM+VV AE+VPY
Sbjct: 130  LRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILGRLMVVVGAEQVPY 189

Query: 666  VPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILEG 845
            VPEGLEAIIFTADGDMRQALNNLQAT+SGF FVNQENVFKVCDQPHPLHVKNMVR +LEG
Sbjct: 190  VPEGLEAIIFTADGDMRQALNNLQATHSGFHFVNQENVFKVCDQPHPLHVKNMVRQVLEG 249

Query: 846  KFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXXX 1025
            KFDDACSGLK LYD+GYSPTDIITTLFRIIKNYDMAEY+KLEFMKETGFAHMRICD    
Sbjct: 250  KFDDACSGLKHLYDMGYSPTDIITTLFRIIKNYDMAEYMKLEFMKETGFAHMRICDGVGS 309

Query: 1026 XXXXXXXXXXXXXVRETAKA 1085
                         VR+TA+A
Sbjct: 310  YLQLCGLLAKLALVRDTARA 329


>ref|XP_006358877.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
          Length = 331

 Score =  564 bits (1453), Expect = e-158
 Identities = 284/321 (88%), Positives = 296/321 (92%)
 Frame = +3

Query: 123  GYDIPWVEKYRPTKVTDVVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHE 302
            G +IPWVEK+RPTKV+D+VGNEDAVSRLQVIARDGNMPNLIL+GPPGTGKTTSILALAHE
Sbjct: 10   GPEIPWVEKFRPTKVSDIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHE 69

Query: 303  LLGANYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 482
            LLG NYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ
Sbjct: 70   LLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDEADSMTSGAQQ 129

Query: 483  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAVVRFSRLSDQEILGRLMIVVQAEKVP 662
            ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCA+VRF+RLSDQEILGRLM VV AEKV 
Sbjct: 130  ALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFARLSDQEILGRLMAVVAAEKVA 189

Query: 663  YVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLHVKNMVRNILE 842
            YVPEGLEAIIFTADGDMRQ LNNLQAT+SGF FVNQENVFKVCDQPHPLHVKNMVRN+LE
Sbjct: 190  YVPEGLEAIIFTADGDMRQGLNNLQATHSGFGFVNQENVFKVCDQPHPLHVKNMVRNVLE 249

Query: 843  GKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHMRICDXXX 1022
            GKFDDAC+GLK LYDLGYSPTDIITTLFRIIKNYDMAEY+KLEF+KETGFAHMRICD   
Sbjct: 250  GKFDDACAGLKALYDLGYSPTDIITTLFRIIKNYDMAEYVKLEFLKETGFAHMRICDGVG 309

Query: 1023 XXXXXXXXXXXXXXVRETAKA 1085
                          VRETAKA
Sbjct: 310  SYLQMCGLLAKLSLVRETAKA 330