BLASTX nr result
ID: Cocculus22_contig00003416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00003416
(2652 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 621 e-175
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 620 e-175
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 605 e-170
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 603 e-169
ref|XP_007033279.1| RNA-binding KH domain-containing protein iso... 551 e-154
ref|XP_007033276.1| RNA-binding KH domain-containing protein iso... 550 e-153
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 522 e-145
ref|XP_007033280.1| RNA-binding KH domain-containing protein iso... 515 e-143
ref|XP_007033277.1| RNA-binding KH domain-containing protein iso... 515 e-143
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 504 e-140
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 502 e-139
ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, part... 484 e-134
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 482 e-133
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 480 e-132
ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Popu... 469 e-129
gb|AEV43362.1| poly C-binding protein [Citrus sinensis] 426 e-116
ref|XP_007033281.1| RNA-binding KH domain-containing protein iso... 378 e-102
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g... 362 4e-97
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 353 2e-94
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 353 2e-94
>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 621 bits (1601), Expect = e-175
Identities = 339/607 (55%), Positives = 417/607 (68%), Gaps = 3/607 (0%)
Frame = -2
Query: 2363 KRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAK 2184
KR K+ R N+ +E S G A+TVYRILCP+ KA+R+ET AK
Sbjct: 46 KRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 105
Query: 2183 IKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKV 2004
I V ++VPG+DERV+II+S+ TK P+ +++ED E E+E + M+PHCPAQ AL+KV
Sbjct: 106 ITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPER----EEEQDHMEPHCPAQDALMKV 161
Query: 2003 HERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRI 1824
HERI+EE DL+G ++ EDD E+ VVTARLLVP+N VGCLLGK G VIQ+LRSETGANIR+
Sbjct: 162 HERIIEE-DLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 220
Query: 1823 LPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXX 1653
LP EHLP CAMSSDELVQISG VAKKALYEVSTLL+QNPR PP +
Sbjct: 221 LPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFH 280
Query: 1652 XXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKAS 1473
MWS+RNS G P MPW GG+ ++ G+AS
Sbjct: 281 PPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQ-PSVVPGGFDGVHAGHGGEAS 339
Query: 1472 AEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWN 1293
EF+MKILCPA KIG VIGKGG NVKQ+QQETGA+IHVED+ E++ERVI VS F+A WN
Sbjct: 340 GEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWN 399
Query: 1292 PQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRV 1113
P+S TI+AILQLQ T E S+KG +TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV
Sbjct: 400 PRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 459
Query: 1112 ISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGF 933
SK+ KP CAS DEELVQISGN VA++AL EIASRLRVR L + EP P+GP GF
Sbjct: 460 YSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANGGVEPAPVGPVPGF 519
Query: 932 GRSEGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAGPAGYPNLNSSME 753
G G+E SKGG E+EPQSYPV P+ GY N+NSSME
Sbjct: 520 GHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAA---TGYHNVNSSME 576
Query: 752 VKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLL 573
KIPN ++++V+G GG N++++ ++ GA+VKL DPQ+G SEC+VEI GSS+ + AAQ++L
Sbjct: 577 SKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQSIL 636
Query: 572 HNFIASA 552
F+ASA
Sbjct: 637 QAFMASA 643
>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
product [Vitis vinifera]
Length = 676
Score = 620 bits (1600), Expect = e-175
Identities = 339/607 (55%), Positives = 416/607 (68%), Gaps = 3/607 (0%)
Frame = -2
Query: 2363 KRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAK 2184
KR K+ R N+ +E S G A+TVYRILCP+ KA+R+ET AK
Sbjct: 18 KRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 77
Query: 2183 IKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKV 2004
I V ++VPG+DERV+II+S+ TK P+ ++ED E E+E + M+PHCPAQ AL+KV
Sbjct: 78 ITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEM----EEEQDHMEPHCPAQDALMKV 133
Query: 2003 HERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRI 1824
HERI+EE DL+G ++ EDD E+ VVTARLLVP+N VGCLLGK G VIQ+LRSETGANIR+
Sbjct: 134 HERIIEE-DLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 192
Query: 1823 LPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXX 1653
LP EHLP CAMSSDELVQISG VAKKALYEVSTLL+QNPR PP +
Sbjct: 193 LPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFH 252
Query: 1652 XXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKAS 1473
MWS+RNS G P MPW GG+ ++ G+AS
Sbjct: 253 PPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQ-PSVVPGGFDGVHAGHGGEAS 311
Query: 1472 AEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWN 1293
EF+MKILCPA KIG VIGKGG NVKQ+QQETGA+IHVED+ E++ERVI VS F+A WN
Sbjct: 312 GEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWN 371
Query: 1292 PQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRV 1113
P+S TI+AILQLQ T E S+KG +TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV
Sbjct: 372 PRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 431
Query: 1112 ISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGF 933
SK+ KP CAS DEELVQISGN VA++AL EIASRLRVR L + EP P+GP GF
Sbjct: 432 YSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANGGVEPAPVGPVPGF 491
Query: 932 GRSEGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAGPAGYPNLNSSME 753
G G+E SKGG E+EPQSYPV P+ GY N+NSSME
Sbjct: 492 GHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSYPVPPAA---TGYHNVNSSME 548
Query: 752 VKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLL 573
KIPN ++++V+G GG N++++ ++ GA+VKL DPQ+G SEC+VEI GSS+ + AAQ++L
Sbjct: 549 SKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQSIL 608
Query: 572 HNFIASA 552
F+ASA
Sbjct: 609 QAFMASA 615
>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
Length = 715
Score = 605 bits (1559), Expect = e-170
Identities = 326/605 (53%), Positives = 405/605 (66%), Gaps = 5/605 (0%)
Frame = -2
Query: 2354 IGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKV 2175
+G KK ++ E S G A+TVYRILCP+ K++R+ET AKI V
Sbjct: 23 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKGGNIVKSLREETQAKITV 82
Query: 2174 DEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHER 1995
+ +PG++ERV+II+SS TK + + D+D ++ E + E M+PHC AQ ALLKVH+R
Sbjct: 83 ADTIPGSEERVIIIYSSPTKIAKKVNKDDD----SAAETKKESMEPHCAAQDALLKVHDR 138
Query: 1994 IVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPP 1815
I+EE DL+G +DD E++ VTARLLVP+N VGCLLGK G VIQ+LRSETGANIR+LP
Sbjct: 139 IIEE-DLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 197
Query: 1814 EHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXX 1644
+ LP CAM++DELVQISG +VAK+ALYEVSTLL+QNPR PP +
Sbjct: 198 DRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP 257
Query: 1643 XXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEF 1464
W RNS HG PS PW GG+G++ R G+ SAEF
Sbjct: 258 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 317
Query: 1463 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQS 1284
+MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNP+S
Sbjct: 318 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 377
Query: 1283 PTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISK 1104
TIDAILQLQ T E SEKGTITTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SK
Sbjct: 378 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSK 437
Query: 1103 DGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRS 924
D KP CAS DEELVQISGN VA++ALTEIASRLR R+L + AEP P+GP Q G +
Sbjct: 438 DDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAA 497
Query: 923 EGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAGPA--GYPNLNSSMEV 750
G R GYE +GG ++EPQSYP PS P+ GYPN+NS+ E
Sbjct: 498 GGLPSRGPLPSGPVGAGISGGYEPFRGGY-DYEPQSYPPPPSAPPPSATGYPNMNSAFEA 556
Query: 749 KIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLLH 570
+IPN A+ +V+G GGSNI ++G++ GA+VKL DP G SECIV+I GSS+ +I+A
Sbjct: 557 RIPNKAVGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQ 616
Query: 569 NFIAS 555
+F+ S
Sbjct: 617 SFMTS 621
>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532838|gb|ESR44021.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 710
Score = 603 bits (1555), Expect = e-169
Identities = 325/603 (53%), Positives = 403/603 (66%), Gaps = 3/603 (0%)
Frame = -2
Query: 2354 IGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKV 2175
+G KK ++ E S G A+TVYRILCP+ K++R+ET AKI V
Sbjct: 23 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKGGNIVKSLREETQAKITV 82
Query: 2174 DEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHER 1995
+ +PG++ERV+II+SS TK + + D+D ++ E + E M+PHC AQ ALLKVH+R
Sbjct: 83 ADTIPGSEERVIIIYSSPTKIAKTQNKDDD----SAAETKKESMEPHCAAQDALLKVHDR 138
Query: 1994 IVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPP 1815
I+EE DL+G +DD E++ VTARLLVP+N VGCLLGK G VIQ+LRSETGANIR+LP
Sbjct: 139 IIEE-DLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 197
Query: 1814 EHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXX 1644
+ LP CAM++DELVQISG +VAK+ALYEVSTLL+QNPR PP +
Sbjct: 198 DRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP 257
Query: 1643 XXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEF 1464
W RNS HG PS PW GG+G++ R G+ SAEF
Sbjct: 258 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 317
Query: 1463 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQS 1284
+MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNP+S
Sbjct: 318 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 377
Query: 1283 PTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISK 1104
TIDAILQLQ T E SEKGTITTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SK
Sbjct: 378 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSK 437
Query: 1103 DGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRS 924
D KP CAS DEELVQISGN VA++ALTEIASRLR R+L + AEP P+GP Q G +
Sbjct: 438 DDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAA 497
Query: 923 EGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAGPAGYPNLNSSMEVKI 744
G R GYE +GG ++EPQSYP PS GYPN+NS+ E +I
Sbjct: 498 GGLPSRGPLPSGPVGAGISGGYEPFRGGY-DYEPQSYPPPPSA---MGYPNMNSAFEARI 553
Query: 743 PNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLLHNF 564
PN A+ +V+G GGSNI ++G++ GA+VKL DP G SECIV+I GSS+ +I+A +F
Sbjct: 554 PNKAVGSVMGTGGSNIPNVGEVAGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSF 613
Query: 563 IAS 555
+ S
Sbjct: 614 MTS 616
>ref|XP_007033279.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
gi|508712308|gb|EOY04205.1| RNA-binding KH
domain-containing protein isoform 4 [Theobroma cacao]
Length = 706
Score = 551 bits (1419), Expect = e-154
Identities = 323/625 (51%), Positives = 396/625 (63%), Gaps = 6/625 (0%)
Frame = -2
Query: 2321 GYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVDEAVPGTDERV 2142
G+E +G N +TVYR+LCP+ KA+R+ET AKI V ++V G DERV
Sbjct: 35 GHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKITVGDSVLGCDERV 94
Query: 2141 VIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERIVEEEDLYGAS 1962
+II+SS K + ++DED + + + E M+P C AQ ALLKVH++I E+ DL+G
Sbjct: 95 IIIYSSPMKV-KTQNSDEDSRGE-NKKDEVVVMEPCCAAQDALLKVHDQIAED-DLFGGM 151
Query: 1961 DHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPEHLPACAMSSD 1782
+DD + VVTARLLVP+N VGCLLGK G VIQ+LRSETGA+IRILP +HLPACAM++D
Sbjct: 152 ALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATD 211
Query: 1781 ELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXXXXXXXXXXXXX 1611
ELVQISG DVAK+ALYEVSTLL+QNPR PP++
Sbjct: 212 ELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSAIPPSNPM--- 268
Query: 1610 XMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEFNMKILCPADKI 1431
WSHRNS H PSMPW GN +ASAEF+MKILCPA KI
Sbjct: 269 --WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKI 326
Query: 1430 GVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQSPTIDAILQLQV 1251
G VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNP+S TIDAILQLQ
Sbjct: 327 GGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQN 386
Query: 1250 HTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADE 1071
T E SEKGT+TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SKD KP CAS DE
Sbjct: 387 KTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDE 446
Query: 1070 ELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXX 891
ELVQISGN VA++AL EIASRLRVR+L V+A AE P+GP GFG + D
Sbjct: 447 ELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAA 506
Query: 890 XXXXXXXXXGYEHSKGGIREFEPQ-SYPVQPSGAGPAGYPNLNSSMEVKIPNTAINAVLG 714
GG RE+EPQ +Y V P+ Y N+N ++E KI N ++V G
Sbjct: 507 AIGPGRSGGYESFRGGGGREYEPQNNYSVPPAA---VRYSNMNGALEAKILNNMSSSVTG 563
Query: 713 AGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLLHNFIASAAHNYNT 534
GGS I + Q++GA+V+L DPQ G SE E GSS+ + AAQ++ +F+ S+ + N
Sbjct: 564 TGGSTILNT-QVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQSMNA 619
Query: 533 XXXXXXXXXXXQS--YNTQQQQSPY 465
QS N Q+SPY
Sbjct: 620 QQSSYQNLSVQQSSYLNMNAQRSPY 644
>ref|XP_007033276.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
gi|590652914|ref|XP_007033278.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508712305|gb|EOY04202.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508712307|gb|EOY04204.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 706
Score = 550 bits (1417), Expect = e-153
Identities = 322/625 (51%), Positives = 396/625 (63%), Gaps = 6/625 (0%)
Frame = -2
Query: 2321 GYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVDEAVPGTDERV 2142
G+E +G N +TVYR+LCP+ KA+R+ET AKI V ++V G DERV
Sbjct: 35 GHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKITVGDSVLGCDERV 94
Query: 2141 VIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERIVEEEDLYGAS 1962
+II+SS K + ++DED + + + E M+P C AQ ALLKVH++I E+ DL+G
Sbjct: 95 IIIYSSPMKV-KTQNSDEDSRGE-NKKDEVVVMEPCCAAQDALLKVHDQIAED-DLFGGM 151
Query: 1961 DHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPEHLPACAMSSD 1782
+DD + VVTARLLVP+N VGCLLGK G VIQ+LRSETGA+IRILP +HLPACAM++D
Sbjct: 152 ALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATD 211
Query: 1781 ELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXXXXXXXXXXXXX 1611
ELVQISG DVAK+ALYEVSTLL+QNPR PP++
Sbjct: 212 ELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSAIPPSNPM--- 268
Query: 1610 XMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEFNMKILCPADKI 1431
WSHRNS H PSMPW GN +ASAEF+MKILCPA KI
Sbjct: 269 --WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKI 326
Query: 1430 GVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQSPTIDAILQLQV 1251
G VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNP+S TIDAILQLQ
Sbjct: 327 GGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQN 386
Query: 1250 HTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADE 1071
T E SEKGT+TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SKD KP CAS DE
Sbjct: 387 KTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDE 446
Query: 1070 ELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXX 891
ELVQISGN VA++AL EIASRLRVR+L V+A AE P+GP GFG + D
Sbjct: 447 ELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAA 506
Query: 890 XXXXXXXXXGYEHSKGGIREFEPQ-SYPVQPSGAGPAGYPNLNSSMEVKIPNTAINAVLG 714
GG RE+EPQ +Y V P+ Y N+N ++E KI N ++V G
Sbjct: 507 AIGPGRSGGYESFRGGGGREYEPQNNYSVPPAA---VRYSNMNGALEAKILNNMSSSVTG 563
Query: 713 AGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLLHNFIASAAHNYNT 534
GGS I + +++GA+V+L DPQ G SE E GSS+ + AAQ++ +F+ S+ + N
Sbjct: 564 TGGSTILN-SEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQSMNA 619
Query: 533 XXXXXXXXXXXQS--YNTQQQQSPY 465
QS N Q+SPY
Sbjct: 620 QQSSYQNLSVQQSSYLNMNAQRSPY 644
>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 760
Score = 522 bits (1345), Expect = e-145
Identities = 308/643 (47%), Positives = 390/643 (60%), Gaps = 6/643 (0%)
Frame = -2
Query: 2375 VRLDKRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDE 2196
V+ ++ +K N+ E S+G ETVYRILCP+ K++R+E
Sbjct: 15 VQFKRKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGVIGKGGGIIKSLREE 74
Query: 2195 THAKIKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHA 2016
T +KI V ++VPG+DERV+IIFS TK R ++DED + E +P++PHC AQ A
Sbjct: 75 TRSKITVSDSVPGSDERVIIIFSPPTKISRKQNSDED----SHKADEQKPLEPHCAAQDA 130
Query: 2015 LLKVHERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGA 1836
LLKVH+RIVEE DLY +DD E N+V RLLVP+N VGCLLGK G VIQ+LRSET A
Sbjct: 131 LLKVHDRIVEE-DLYDGVTFDDDNE-NIVVTRLLVPNNLVGCLLGKRGDVIQRLRSETRA 188
Query: 1835 NIRILPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXX 1665
NIR+LP + LP CAM +DELVQISG DVAKKALYEVSTLL+QNPR PP+
Sbjct: 189 NIRVLPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDKPPLG--LAIPF 246
Query: 1664 XXXXXXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXX 1485
+W +R HG P MPW G N
Sbjct: 247 GGQGFHLRGAPNMFPPGNPIWPNREPS-HGMPPMPWIGECENHSSGYGRGGFDGDPAGHG 305
Query: 1484 GKASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFD 1305
+ASAEF +KILC A KIG VIGKGG NVKQ+Q+ETGANIHV+D++ +++ERVI VS F+
Sbjct: 306 VEASAEFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDASTDSEERVIRVSAFE 365
Query: 1304 APWNPQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQA 1125
P+S TI+AILQLQ E+S+KGTITTRLLVPS+KVGC+LGQGG +I EMRRR QA
Sbjct: 366 VLRIPRSQTIEAILQLQNKASELSDKGTITTRLLVPSSKVGCILGQGGQVINEMRRRTQA 425
Query: 1124 DIRVISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGP 945
DIRV SKD +P CA DEELVQISGN VA++AL EI SRLR+R+L +A E P+GP
Sbjct: 426 DIRVYSKDDRPKCADEDEELVQISGNFAVAKDALAEITSRLRIRTLRDTNAGEEHAPVGP 485
Query: 944 FQGFGRSEGFHDR-XXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAGPAGYPNL 768
FG + Y+H K G E+EP+ YPV P+ +GY +
Sbjct: 486 PPRFGPPGSLPVKGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEGYPVPPAA---SGYQRV 542
Query: 767 NSSMEVKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIA 588
N +++ +IPN A+ + G GGS++S IG++ +VK D Q+G E + EI G SDQ+ A
Sbjct: 543 NRALDSRIPNNAVGSFTGIGGSDVSHIGEVPRPRVKYQDSQSGGFEQVAEIRG-SDQLNA 601
Query: 587 AQNLLHNFIASAAHNYNT-XXXXXXXXXXXQSY-NTQQQQSPY 465
AQN+L +AS N + SY N QSPY
Sbjct: 602 AQNILQALMASMGQNASAQPSSHHNANTRQGSYPNISDHQSPY 644
>ref|XP_007033280.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
gi|508712309|gb|EOY04206.1| RNA-binding KH
domain-containing protein isoform 5 [Theobroma cacao]
Length = 591
Score = 515 bits (1326), Expect = e-143
Identities = 295/546 (54%), Positives = 354/546 (64%), Gaps = 4/546 (0%)
Frame = -2
Query: 2321 GYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVDEAVPGTDERV 2142
G+E +G N +TVYR+LCP+ KA+R+ET AKI V ++V G DERV
Sbjct: 35 GHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKITVGDSVLGCDERV 94
Query: 2141 VIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERIVEEEDLYGAS 1962
+II+SS K + ++DED + + + E M+P C AQ ALLKVH++I E+ DL+G
Sbjct: 95 IIIYSSPMKV-KTQNSDEDSRGE-NKKDEVVVMEPCCAAQDALLKVHDQIAED-DLFGGM 151
Query: 1961 DHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPEHLPACAMSSD 1782
+DD + VVTARLLVP+N VGCLLGK G VIQ+LRSETGA+IRILP +HLPACAM++D
Sbjct: 152 ALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATD 211
Query: 1781 ELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXXXXXXXXXXXXX 1611
ELVQISG DVAK+ALYEVSTLL+QNPR PP++
Sbjct: 212 ELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSAIPPSNPM--- 268
Query: 1610 XMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEFNMKILCPADKI 1431
WSHRNS H PSMPW GN +ASAEF+MKILCPA KI
Sbjct: 269 --WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKI 326
Query: 1430 GVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQSPTIDAILQLQV 1251
G VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNP+S TIDAILQLQ
Sbjct: 327 GGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQN 386
Query: 1250 HTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADE 1071
T E SEKGT+TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SKD KP CAS DE
Sbjct: 387 KTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDE 446
Query: 1070 ELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXX 891
ELVQISGN VA++AL EIASRLRVR+L V+A AE P+GP GFG + D
Sbjct: 447 ELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAA 506
Query: 890 XXXXXXXXXGYEHSKGGIREFEPQ-SYPVQPSGAGPAGYPNLNSSMEVKIPNTAINAVLG 714
GG RE+EPQ +Y V P+ Y N+N ++E KI N ++V G
Sbjct: 507 AIGPGRSGGYESFRGGGGREYEPQNNYSVPPAA---VRYSNMNGALEAKILNNMSSSVTG 563
Query: 713 AGGSNI 696
GGS I
Sbjct: 564 TGGSTI 569
>ref|XP_007033277.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
gi|508712306|gb|EOY04203.1| RNA-binding KH
domain-containing protein isoform 2 [Theobroma cacao]
Length = 580
Score = 515 bits (1326), Expect = e-143
Identities = 295/546 (54%), Positives = 354/546 (64%), Gaps = 4/546 (0%)
Frame = -2
Query: 2321 GYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVDEAVPGTDERV 2142
G+E +G N +TVYR+LCP+ KA+R+ET AKI V ++V G DERV
Sbjct: 35 GHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKITVGDSVLGCDERV 94
Query: 2141 VIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERIVEEEDLYGAS 1962
+II+SS K + ++DED + + + E M+P C AQ ALLKVH++I E+ DL+G
Sbjct: 95 IIIYSSPMKV-KTQNSDEDSRGE-NKKDEVVVMEPCCAAQDALLKVHDQIAED-DLFGGM 151
Query: 1961 DHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPEHLPACAMSSD 1782
+DD + VVTARLLVP+N VGCLLGK G VIQ+LRSETGA+IRILP +HLPACAM++D
Sbjct: 152 ALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILPADHLPACAMATD 211
Query: 1781 ELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXXXXXXXXXXXXX 1611
ELVQISG DVAK+ALYEVSTLL+QNPR PP++
Sbjct: 212 ELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSAIPPSNPM--- 268
Query: 1610 XMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEFNMKILCPADKI 1431
WSHRNS H PSMPW GN +ASAEF+MKILCPA KI
Sbjct: 269 --WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKI 326
Query: 1430 GVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQSPTIDAILQLQV 1251
G VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNP+S TIDAILQLQ
Sbjct: 327 GGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQN 386
Query: 1250 HTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADE 1071
T E SEKGT+TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SKD KP CAS DE
Sbjct: 387 KTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDE 446
Query: 1070 ELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXX 891
ELVQISGN VA++AL EIASRLRVR+L V+A AE P+GP GFG + D
Sbjct: 447 ELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAA 506
Query: 890 XXXXXXXXXGYEHSKGGIREFEPQ-SYPVQPSGAGPAGYPNLNSSMEVKIPNTAINAVLG 714
GG RE+EPQ +Y V P+ Y N+N ++E KI N ++V G
Sbjct: 507 AIGPGRSGGYESFRGGGGREYEPQNNYSVPPAA---VRYSNMNGALEAKILNNMSSSVTG 563
Query: 713 AGGSNI 696
GGS I
Sbjct: 564 TGGSTI 569
>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532839|gb|ESR44022.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 528
Score = 504 bits (1298), Expect = e-140
Identities = 272/486 (55%), Positives = 330/486 (67%), Gaps = 3/486 (0%)
Frame = -2
Query: 2354 IGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKV 2175
+G KK ++ E S G A+TVYRILCP+ K++R+ET AKI V
Sbjct: 23 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKGGNIVKSLREETQAKITV 82
Query: 2174 DEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHER 1995
+ +PG++ERV+II+SS TK + + D+D ++ E + E M+PHC AQ ALLKVH+R
Sbjct: 83 ADTIPGSEERVIIIYSSPTKIAKTQNKDDD----SAAETKKESMEPHCAAQDALLKVHDR 138
Query: 1994 IVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPP 1815
I+EE DL+G +DD E++ VTARLLVP+N VGCLLGK G VIQ+LRSETGANIR+LP
Sbjct: 139 IIEE-DLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 197
Query: 1814 EHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXX 1644
+ LP CAM++DELVQISG +VAK+ALYEVSTLL+QNPR PP +
Sbjct: 198 DRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP 257
Query: 1643 XXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEF 1464
W RNS HG PS PW GG+G++ R G+ SAEF
Sbjct: 258 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 317
Query: 1463 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQS 1284
+MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNP+S
Sbjct: 318 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 377
Query: 1283 PTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISK 1104
TIDAILQLQ T E SEKGTITTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SK
Sbjct: 378 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSK 437
Query: 1103 DGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRS 924
D KP CAS DEELVQISGN VA++ALTEIASRLR R+L + AEP P+GP Q G +
Sbjct: 438 DDKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAA 497
Query: 923 EGFHDR 906
G R
Sbjct: 498 GGLPSR 503
>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 537
Score = 502 bits (1293), Expect = e-139
Identities = 288/527 (54%), Positives = 341/527 (64%), Gaps = 2/527 (0%)
Frame = -2
Query: 2363 KRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAK 2184
KR +K + N+ G E S+G P +TVYRILCP+ K +R+ET AK
Sbjct: 18 KRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVIGKGGGIIKGLREETQAK 77
Query: 2183 IKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKV 2004
I V + VPG+DERV+II+SS K R + EDL E E + M+P+C AQ ALLKV
Sbjct: 78 ITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTM----ENEQDIMEPYCAAQDALLKV 133
Query: 2003 HERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRI 1824
H+RIVEE DL+G +DD E+ VTARLLVP+N VGCLLGK G VIQ+LRSETGANIR+
Sbjct: 134 HDRIVEE-DLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 192
Query: 1823 LPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPRP--PMNHXXXXXXXXXXX 1650
LP +HLP CAMS+DELVQIS DVAKKALYEVSTLL+QNPR P +
Sbjct: 193 LPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPPSVPMPYSGQSFHP 252
Query: 1649 XXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASA 1470
MW H NS H P MP G +G++ + SA
Sbjct: 253 PGGPMKNLPPLGSPMWPHHNSS-HSIPPMPIMGRYGSQSSGFGPGGFDDVPRGHVAEPSA 311
Query: 1469 EFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNP 1290
EF+MKILC A KIG VIGKGGSNVK +QQ+TGA+IHVED++ E+DERVI VS +A WNP
Sbjct: 312 EFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSASEALWNP 371
Query: 1289 QSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVI 1110
+S TIDAILQLQ T + SEKGTITTRLLVPS+KVGC+LGQGG +I EMRRR QADIRV
Sbjct: 372 RSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVY 431
Query: 1109 SKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFG 930
SKD KP CAS DEELVQISG VA++AL EIASRLRVR+L V+A AEPGP+GP QGFG
Sbjct: 432 SKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVNAGAEPGPVGPIQGFG 491
Query: 929 RSEGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAG 789
+ R GYE + E+E SYPV P+ G
Sbjct: 492 AARSLPGR--GSSGMMGASSSGGYEPLRDTEHEYESHSYPVPPAAVG 536
Score = 135 bits (341), Expect = 7e-29
Identities = 101/328 (30%), Positives = 149/328 (45%), Gaps = 44/328 (13%)
Frame = -2
Query: 1457 KILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAP------- 1299
+ILCP+ KIG VIGKGG +K +++ET A I V D +DERVI++ + +P
Sbjct: 48 RILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIII--YSSPEKISRNH 105
Query: 1298 --------------WNPQSPTIDAILQLQ-----------VHTHEISEKGTITTRLLVPS 1194
P DA+L++ + + + +E G +T RLLVP+
Sbjct: 106 NDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPN 165
Query: 1193 NKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEI 1014
N VGCLLG+ G +I +R A+IRV+ D PTCA + +ELVQIS +VA+ AL E+
Sbjct: 166 NMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEV 225
Query: 1013 ASRLRVRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXXXXXXXXXXXGYEHSKGGIR 834
++ L + P P+ G + FH H+
Sbjct: 226 STLLH----QNPRKDKPPSVPMPYSG----QSFHPPGGPMKNLPPLGSPMWPHHNSSHSI 277
Query: 833 EFEP--QSYPVQPSGAGPAGY----------PNLNSSMEVKIPNTAINAVLGAGGSNISS 690
P Y Q SG GP G+ P+ SM++ I V+G GGSN+
Sbjct: 278 PPMPIMGRYGSQSSGFGPGGFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKV 337
Query: 689 IGQLTGAKVKLNDPQAGVSECIVEIHGS 606
+ Q TGA + + D A E ++ + S
Sbjct: 338 VQQDTGASIHVEDASAESDERVIRVSAS 365
>ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
gi|462413799|gb|EMJ18848.1| hypothetical protein
PRUPE_ppa027198mg, partial [Prunus persica]
Length = 576
Score = 484 bits (1247), Expect = e-134
Identities = 287/572 (50%), Positives = 357/572 (62%), Gaps = 4/572 (0%)
Frame = -2
Query: 2390 RRNTRVRLDKRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXK 2211
R N + + N +KK N+ E +TVYRILCP+ K
Sbjct: 12 RPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIGGVIGKGGGIVK 71
Query: 2210 AMRDETHAKIKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHC 2031
A+R+ET AKI V ++V G+DERV+IIFSS TK S+ + + D+S+E E EPM PHC
Sbjct: 72 ALREETRAKITVADSVLGSDERVIIIFSSPTKI----SSKQTNDGDSSEENELEPMDPHC 127
Query: 2030 PAQHALLKVHERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLR 1851
AQ ALLKVH RIVEE DL+G +DD E++VVTARLLVP+N VGCLLGKGG VIQ+LR
Sbjct: 128 AAQDALLKVHNRIVEE-DLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGKGGDVIQRLR 186
Query: 1850 SETGANIRILPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHX 1680
SET A+IR+LP + LP CAM +DELVQISG DV K+ALYEVSTLL+QNPR PP
Sbjct: 187 SETSASIRVLPADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPRKDKPPSGFP 246
Query: 1679 XXXXXXXXXXXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXX 1500
MWS+R H MP G+GN
Sbjct: 247 MPFWGQGFRPPGAPMTNVLPPGNPMWSNRAPS-HSTAPMPRMEGYGNCSSEFALGGFNGV 305
Query: 1499 XXXXXGKASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVIL 1320
G+A AEF+MKILC KIG VIGKGG NVKQ+Q ETGA+IHV++++ +++ERVI
Sbjct: 306 PPGHGGEALAEFSMKILCSPGKIGGVIGKGGFNVKQLQLETGASIHVQEASTDSEERVIH 365
Query: 1319 VSCFDAPWNPQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMR 1140
VS F+A WNP S TI+AIL+LQ T E+S+KG ITTRLLVPS+KVGC+LGQGG +I EMR
Sbjct: 366 VSAFEAFWNPISQTIEAILELQNKTSELSDKGIITTRLLVPSSKVGCILGQGGQVINEMR 425
Query: 1139 RRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEP 960
RR QADIRV SKD +P CA+ DEELVQISGN VA++AL EI SRLRVR+L +A AEP
Sbjct: 426 RRTQADIRVYSKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRDANAGAEP 485
Query: 959 GPMGPFQGFGRSEGF-HDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSGAGPA 783
+GP GFG + Y+ K G E+E QSY + PS A +
Sbjct: 486 ALVGPAHGFGLAGSVPGGGPRQPPSAVGAGSSSRYDPLKVGRHEYELQSYRI-PSTA--S 542
Query: 782 GYPNLNSSMEVKIPNTAINAVLGAGGSNISSI 687
GYP++N ++E KIP +++ G G N S+I
Sbjct: 543 GYPSVNHALEGKIPKNTVDSFPGTRGGNTSTI 574
>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 705
Score = 482 bits (1240), Expect = e-133
Identities = 289/650 (44%), Positives = 374/650 (57%), Gaps = 7/650 (1%)
Frame = -2
Query: 2393 YRRNTRVRLD----KRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXX 2226
Y+RN+ + KR G K ++ N +E S+ ++T Y ILC +
Sbjct: 4 YKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVIGKG 63
Query: 2225 XXXXKAMRDETHAKIKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEP 2046
KA+R+ET AKI V ++VPG+D+R+VI+ S STK R + D++ + + E E+
Sbjct: 64 GSIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKE-ENCS 122
Query: 2045 MQPHCPAQHALLKVHERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHV 1866
M+PHC AQ ALLKVH RIVEE DL G + +DK V+ RLLVP+N VGCLLG+ G V
Sbjct: 123 MEPHCAAQDALLKVHNRIVEE-DLQGVQN--EDKSETVIITRLLVPNNLVGCLLGRKGDV 179
Query: 1865 IQKLRSETGANIRILPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---P 1695
IQKLRSETGA+IR+L EHLPACAM++DELVQISG + KKALYEVSTLL+QNPR P
Sbjct: 180 IQKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKP 239
Query: 1694 PMNHXXXXXXXXXXXXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXX 1515
+ MWS + +G GG+ N+
Sbjct: 240 ISSFPMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMSPALGVGGYRNQLTGFGRA 299
Query: 1514 XXXXXXXXXXGKASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEAD 1335
G+A +F MKILC A KIG VIGKGG NVKQ+QQ+TGA IHVED E+D
Sbjct: 300 DFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVEDVAPESD 359
Query: 1334 ERVILVSCFDAPWNPQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHI 1155
ERVI VS ++ W+P+S TIDAILQLQ T E S+KG +TTRLL PSNKVGC++GQGG +
Sbjct: 360 ERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQV 419
Query: 1154 ITEMRRRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVH 975
I EMRRR QADIRV+SKD KP CASADEELVQISG++ VA++AL EI+SRLR R L +
Sbjct: 420 INEMRRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDAN 479
Query: 974 AAAEPGPMGPFQGFGRSEGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSG 795
+ E P+ P GF SE F YEH KG +RE++ SYP P
Sbjct: 480 SKVESTPVRPLPGFVPSEDFRSGDPQRSGAMGAGSSRRYEHLKGAVREYDHPSYPDLPIA 539
Query: 794 AGPAGYPNLNSSMEVKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEI 615
+ N+ S E+K P+ + + G GG NI + G + DP++ I +I
Sbjct: 540 ---TRFSNIRSPPEMKFPDHSYGSAKGTGGYNID---EFAGRSARFQDPRSVGPGFIDDI 593
Query: 614 HGSSDQMIAAQNLLHNFIASAAHNYNTXXXXXXXXXXXQSYNTQQQQSPY 465
G+SD M A N+ H ++ N+N ++ QQ Y
Sbjct: 594 RGTSDHMNAGHNVFH----GSSENFNAGRPTFQGYGSPAGQSSNIQQGAY 639
>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 707
Score = 480 bits (1236), Expect = e-132
Identities = 285/615 (46%), Positives = 364/615 (59%), Gaps = 7/615 (1%)
Frame = -2
Query: 2393 YRRNTRVRLD----KRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXX 2226
Y+RN+ + KR G K ++ N +E S+ ++T Y ILC +
Sbjct: 4 YKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVIGKG 63
Query: 2225 XXXXKAMRDETHAKIKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEP 2046
KA+R+ET AKI V ++VPG+D+R+VII S STK R + D++ + + E+ +
Sbjct: 64 GSIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEENYS- 122
Query: 2045 MQPHCPAQHALLKVHERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHV 1866
M+PHC AQ ALLKVH RIVEE DL G + +DK V+ RLLVP+N VGCLLG+ G V
Sbjct: 123 MEPHCAAQDALLKVHNRIVEE-DLLGVQN--EDKSEAVIITRLLVPNNLVGCLLGRKGDV 179
Query: 1865 IQKLRSETGANIRILPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---P 1695
IQKLRSETGA+IR+L EHLPACAM++DELVQISG + KKALYEVSTLL+QNPR P
Sbjct: 180 IQKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKP 239
Query: 1694 PMNHXXXXXXXXXXXXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXX 1515
+ MWS + +G P GG+ N+
Sbjct: 240 ISSFPMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMPPALGVGGYRNQLTGFGRA 299
Query: 1514 XXXXXXXXXXGKASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEAD 1335
G+A +F MKILC A KIG VIGKGG NVKQ+QQETGA IHVED E+D
Sbjct: 300 DFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVEDVAPESD 359
Query: 1334 ERVILVSCFDAPWNPQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHI 1155
ERVI VS ++ W+P+S TIDAILQLQ T E S+KG +TTRLL PSNKVGC++GQGG +
Sbjct: 360 ERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQV 419
Query: 1154 ITEMRRRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVH 975
I EMRRR QADIRV+SKD KP CASADEELVQISG++ VA++AL EI+SRLR R L +
Sbjct: 420 INEMRRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDAN 479
Query: 974 AAAEPGPMGPFQGFGRSEGFHDRXXXXXXXXXXXXXXGYEHSKGGIREFEPQSYPVQPSG 795
+ E + P GF SE F R YEH KG +RE + SYP P
Sbjct: 480 SKVESTHVRPLPGFVPSEDFRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPSYPDLPIA 539
Query: 794 AGPAGYPNLNSSMEVKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEI 615
+ N S E+K P+ + G GG NI + G+ + DP++ + +I
Sbjct: 540 ---TRFSNTRSPPEMKFPDHSYGTAKGTGGYNID---EFAGSSARYQDPRSIGPGFVDDI 593
Query: 614 HGSSDQMIAAQNLLH 570
G+SD+M A N+ H
Sbjct: 594 RGTSDRMNAGHNVFH 608
>ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Populus trichocarpa]
gi|550339070|gb|ERP61256.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
Length = 563
Score = 469 bits (1207), Expect = e-129
Identities = 261/488 (53%), Positives = 313/488 (64%), Gaps = 6/488 (1%)
Frame = -2
Query: 2351 GFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVD 2172
G SR+ + +TVYRILCP+ KA+R+ET +KI V
Sbjct: 21 GVSSSRKGKWSDSHGEECSGDGDTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVA 80
Query: 2171 EAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERI 1992
++V G+DERV+II+SSS K PR DE L + + E +PHC AQ ALLKVH+RI
Sbjct: 81 DSVQGSDERVIIIYSSSDKPPRKMDGDEGLP---AGNGQQEAFEPHCAAQDALLKVHDRI 137
Query: 1991 VEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPE 1812
VEE DL+G +DD ++NVVTARLLVP+N VGC+LGK G VIQ+LRSETGANIR+LP +
Sbjct: 138 VEE-DLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPAD 196
Query: 1811 HLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPRP------PMNHXXXXXXXXXXX 1650
HLP+CAM +DELVQISG VAK+ALYE+S LL+QNPR PM +
Sbjct: 197 HLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDKLPSVPMPYGGRTFHPPSDS 256
Query: 1649 XXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASA 1470
W HRNS P SMPW G +GN + SA
Sbjct: 257 MANMLPPGNPM----WPHRNST---PHSMPWMGEYGNHPSEFGPGGFNGVPPGHGREPSA 309
Query: 1469 EFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNP 1290
EF+MKILC KIG VIGKGGSNVK +QQETGA+IHVED++ E++ER I VS F+ WNP
Sbjct: 310 EFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAFEGLWNP 369
Query: 1289 QSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVI 1110
+S TIDAILQLQ T + SEKG I TRLLVPS+KVGC+LGQGG +I EMRRR QADIRV
Sbjct: 370 RSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVY 429
Query: 1109 SKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFG 930
K+ KP CAS DEELVQISGN VA++AL EIASRLR R+L +A EPGP GP GFG
Sbjct: 430 PKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRDANAGTEPGPAGPVPGFG 489
Query: 929 RSEGFHDR 906
+ R
Sbjct: 490 PARNLPGR 497
>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 426 bits (1096), Expect = e-116
Identities = 228/418 (54%), Positives = 283/418 (67%), Gaps = 3/418 (0%)
Frame = -2
Query: 2354 IGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKV 2175
+G KK ++ E S G A+TVYRILCP+ K++R+ET AKI V
Sbjct: 23 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 82
Query: 2174 DEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHER 1995
+ +PG++ERV+II+SS TK + + D+D ++ E + E M+PHC AQ ALLKVH+R
Sbjct: 83 ADTIPGSEERVIIIYSSPTKIAKTQNKDDD----SAAETKKESMEPHCAAQDALLKVHDR 138
Query: 1994 IVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPP 1815
I+EE DL+G +DD E++ +TARLLVP+N VGCLLGK G VIQ+LRSETGANIR+LP
Sbjct: 139 IIEE-DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 197
Query: 1814 EHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXX 1644
+ LP CAM++DE+VQISG +VAK+ALYEVSTLL+QNPR PP +
Sbjct: 198 DRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP 257
Query: 1643 XXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEF 1464
W RNS HG PS PW GG+G++ R G+ SAEF
Sbjct: 258 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 317
Query: 1463 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQS 1284
+MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNP+S
Sbjct: 318 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 377
Query: 1283 PTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVI 1110
TIDAILQLQ T E SEKGTITTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV+
Sbjct: 378 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 435
Score = 123 bits (308), Expect = 5e-25
Identities = 96/323 (29%), Positives = 145/323 (44%), Gaps = 44/323 (13%)
Frame = -2
Query: 1457 KILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAP------- 1299
+ILCP+ KIG VIGK G+ VK +++ET A I V D+ ++ERVI++ + +P
Sbjct: 50 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII--YSSPTKIAKTQ 107
Query: 1298 --------------WNPQSPTIDAILQLQ-----------VHTHEISEKGTITTRLLVPS 1194
P DA+L++ + + + +E TIT RLLVP+
Sbjct: 108 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 167
Query: 1193 NKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEI 1014
N VGCLLG+ G +I +R A+IRV+ D P CA +E+VQISG NVA+ AL E+
Sbjct: 168 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 227
Query: 1013 ASRLR------------VRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXXXXXXXXX 870
++ L ++ G + + P PM G S + R
Sbjct: 228 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNS-SWPARNSSLHGMPSTPW 286
Query: 869 XXGYEHSKGGIREFEPQSYPVQPSGAGPAGYPNLNSSMEVKIPNTAINAVLGAGGSNISS 690
GY G + S + G G + SM++ I V+G GG N+
Sbjct: 287 MGGY-----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 341
Query: 689 IGQLTGAKVKLNDPQAGVSECIV 621
+ Q TGA + + D E ++
Sbjct: 342 LQQETGASIHVEDAPTDSDERVI 364
>ref|XP_007033281.1| RNA-binding KH domain-containing protein isoform 6, partial
[Theobroma cacao] gi|508712310|gb|EOY04207.1| RNA-binding
KH domain-containing protein isoform 6, partial
[Theobroma cacao]
Length = 530
Score = 378 bits (970), Expect = e-102
Identities = 224/442 (50%), Positives = 269/442 (60%), Gaps = 6/442 (1%)
Frame = -2
Query: 1772 QISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXXXXXXXXXXXXXXMW 1602
+ISG DVAK+ALYEVSTLL+QNPR PP++ W
Sbjct: 39 KISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSAIPPSNPM-----W 93
Query: 1601 SHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEFNMKILCPADKIGVV 1422
SHRNS H PSMPW GN +ASAEF+MKILCPA KIG V
Sbjct: 94 SHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGV 153
Query: 1421 IGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDAPWNPQSPTIDAILQLQVHTH 1242
IGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNP+S TIDAILQLQ T
Sbjct: 154 IGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTS 213
Query: 1241 EISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISKDGKPTCASADEELV 1062
E SEKGT+TTRLLVPS+KVGC+LGQGGH+I EMRRR QADIRV SKD KP CAS DEELV
Sbjct: 214 EFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELV 273
Query: 1061 QISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQGFGRSEGFHDRXXXXXXXX 882
QISGN VA++AL EIASRLRVR+L V+A AE P+GP GFG + D
Sbjct: 274 QISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMADGLPPAAAIG 333
Query: 881 XXXXXXGYEHSKGGIREFEPQ-SYPVQPSGAGPAGYPNLNSSMEVKIPNTAINAVLGAGG 705
GG RE+EPQ +Y V P+ Y N+N ++E KI N ++V G GG
Sbjct: 334 PGRSGGYESFRGGGGREYEPQNNYSVPPAA---VRYSNMNGALEAKILNNMSSSVTGTGG 390
Query: 704 SNISSIGQLTGAKVKLNDPQAGVSECIVEIHGSSDQMIAAQNLLHNFIASAAHNYNTXXX 525
S I + +++GA+V+L DPQ G SE E GSS+ + AAQ++ +F+ S+ + N
Sbjct: 391 STILN-SEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQSMNAQQS 446
Query: 524 XXXXXXXXQS--YNTQQQQSPY 465
QS N Q+SPY
Sbjct: 447 SYQNLSVQQSSYLNMNAQRSPY 468
Score = 94.7 bits (234), Expect = 2e-16
Identities = 68/202 (33%), Positives = 95/202 (47%)
Frame = -2
Query: 2318 YEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVDEAVPGTDERVV 2139
+ P+ G AE +ILCP K ++ ET A I V++A +DERV+
Sbjct: 127 FPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVI 186
Query: 2138 IIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERIVEEEDLYGASD 1959
+ SA E L P A+L++ + E
Sbjct: 187 RV-----------SAIEGL------------WNPRSQTIDAILQLQNKTSEFS------- 216
Query: 1958 HEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPEHLPACAMSSDE 1779
E VT RLLVPS++VGC+LG+GGHVI ++R T A+IR+ + P CA +E
Sbjct: 217 -----EKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEE 271
Query: 1778 LVQISGASDVAKKALYEVSTLL 1713
LVQISG VAK AL E+++ L
Sbjct: 272 LVQISGNFGVAKDALAEIASRL 293
>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
brachyantha]
Length = 773
Score = 362 bits (930), Expect = 4e-97
Identities = 211/474 (44%), Positives = 287/474 (60%), Gaps = 4/474 (0%)
Frame = -2
Query: 2345 KKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXXKAMRDETHAKIKVDEA 2166
+K +R + ++ + ET+YRILCP KA+RDET AKI+V ++
Sbjct: 25 RKRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGGDVVKALRDETKAKIRVADS 84
Query: 2165 VPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPHCPAQHALLKVHERIVE 1986
+PG DERV+IIF+ P S DE + ++D ++ M+PHC AQ ALLK+H++I E
Sbjct: 85 IPGADERVIIIFNY----PSQSEDDEAAQNISTDGFQN--MKPHCFAQDALLKIHDKIAE 138
Query: 1985 EEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKLRSETGANIRILPPEHL 1806
+EDL+G DHE + + VTAR+LVP NQVGCLLGKGG +IQ+LR+ETGA IR+LP E+L
Sbjct: 139 DEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSIIQQLRNETGAGIRVLPSENL 198
Query: 1805 PACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNHXXXXXXXXXXXXXXXX 1635
P CA+ SDELVQISGA + +KALYE+ST L+Q+PR PP+
Sbjct: 199 PQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRKHQSPPQL 258
Query: 1634 XXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXXXXXXXXGKASAEFNMK 1455
+ + P +P + N LR + EF++K
Sbjct: 259 PHANPMLPHLHVDHS------PQIPLLDPYRNGPLRYHAG------------EAEEFSIK 300
Query: 1454 ILCPADKIGVVIGKGGSNVKQIQQETGANIHVED-STGEADERVILVSCFDAPWNPQSPT 1278
ILC ++ IG VIGK G NV+Q++Q+TGA I V++ + ER+I+VS + P +P SPT
Sbjct: 301 ILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERLIVVSSQEIPDDPVSPT 360
Query: 1277 IDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITEMRRRCQADIRVISKDG 1098
I+A++ L +E +TTRL+VPSNKVGC+LG+GG +ITEMRRR A+IRV SK
Sbjct: 361 IEALILLHSKVSAPAENRHLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKAD 420
Query: 1097 KPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAAEPGPMGPFQG 936
KP S DEELVQ++G +AR ALTEIASRLR R+L ++ P P PF G
Sbjct: 421 KPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPPPFAPFDG 474
Score = 72.8 bits (177), Expect = 8e-10
Identities = 37/83 (44%), Positives = 56/83 (67%)
Frame = -2
Query: 791 GPAGYPNLNSSMEVKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEIH 612
G GYP S+E++IPN+ + V+G GG+N++ I Q++GA+VKL + SE IVEI
Sbjct: 680 GFTGYPG--GSVELRIPNSYLETVIGVGGANLAEIRQISGARVKLLETHPASSESIVEIQ 737
Query: 611 GSSDQMIAAQNLLHNFIASAAHN 543
G DQ+ AAQ+LL FI ++ ++
Sbjct: 738 GVPDQVKAAQSLLQGFIGASGNS 760
>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
Length = 677
Score = 353 bits (907), Expect = 2e-94
Identities = 206/490 (42%), Positives = 291/490 (59%), Gaps = 4/490 (0%)
Frame = -2
Query: 2393 YRRNTRVRLDKRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXX 2214
++ NT + N K +R + ++ ET+YRILCP
Sbjct: 9 HKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 2213 KAMRDETHAKIKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPH 2034
KA+RD T AKI+V +++PG DERV+IIF+ S++T A+ +++ TD E M+PH
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAA---QNISTDG-----FEDMKPH 120
Query: 2033 CPAQHALLKVHERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKL 1854
C AQ ALLK+H++I +EDL+ HE + + V AR+LVP NQVGCLLGKGG +IQ+L
Sbjct: 121 CFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQL 180
Query: 1853 RSETGANIRILPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNH 1683
R++TGA IR+LP E+LP CA+ SDELVQISG+S + +KALYE+ST L+Q+PR PP+
Sbjct: 181 RNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEE 240
Query: 1682 XXXXXXXXXXXXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXX 1503
+ + P +P + N L+
Sbjct: 241 IIDASTQRKHQAPPQLPHANPMLPHLHVDHS------PQIPLLDPYRNRPLQ-------- 286
Query: 1502 XXXXXXGKASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVED-STGEADERV 1326
+ EF++KILC ++ IG VIGK G NV+Q++Q+TGA + V++ ++ER+
Sbjct: 287 ----YHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342
Query: 1325 ILVSCFDAPWNPQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITE 1146
I+VS + P +P SPTI+A++ L ++E +TTRL+VPSNKVGC++G+GG +ITE
Sbjct: 343 IVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITE 402
Query: 1145 MRRRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAA 966
MRRR A+IRV SK KP S DEELVQ++G +AR ALTEIASRLR R+L ++
Sbjct: 403 MRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSN 462
Query: 965 EPGPMGPFQG 936
P P PF G
Sbjct: 463 NPTPFAPFDG 472
>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
putative RNA-binding protein [Oryza sativa Japonica
Group] gi|110289325|gb|ABB47821.2| KH domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 762
Score = 353 bits (907), Expect = 2e-94
Identities = 206/490 (42%), Positives = 291/490 (59%), Gaps = 4/490 (0%)
Frame = -2
Query: 2393 YRRNTRVRLDKRNIGFKKSRRNDYGYEPSAGIPNGAETVYRILCPTXXXXXXXXXXXXXX 2214
++ NT + N K +R + ++ ET+YRILCP
Sbjct: 9 HKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 2213 KAMRDETHAKIKVDEAVPGTDERVVIIFSSSTKTPRASSADEDLETDASDEKEHEPMQPH 2034
KA+RD T AKI+V +++PG DERV+IIF+ S++T A+ +++ TD E M+PH
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAA---QNISTDG-----FEDMKPH 120
Query: 2033 CPAQHALLKVHERIVEEEDLYGASDHEDDKESNVVTARLLVPSNQVGCLLGKGGHVIQKL 1854
C AQ ALLK+H++I +EDL+ HE + + V AR+LVP NQVGCLLGKGG +IQ+L
Sbjct: 121 CFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQL 180
Query: 1853 RSETGANIRILPPEHLPACAMSSDELVQISGASDVAKKALYEVSTLLYQNPR---PPMNH 1683
R++TGA IR+LP E+LP CA+ SDELVQISG+S + +KALYE+ST L+Q+PR PP+
Sbjct: 181 RNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEE 240
Query: 1682 XXXXXXXXXXXXXXXXXXXXXXXXXMWSHRNSGFHGPPSMPWGGGFGNEFLRXXXXXXXX 1503
+ + P +P + N L+
Sbjct: 241 IIDASTQRKHQAPPQLPHANPMLPHLHVDHS------PQIPLLDPYRNRPLQ-------- 286
Query: 1502 XXXXXXGKASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVED-STGEADERV 1326
+ EF++KILC ++ IG VIGK G NV+Q++Q+TGA + V++ ++ER+
Sbjct: 287 ----YHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342
Query: 1325 ILVSCFDAPWNPQSPTIDAILQLQVHTHEISEKGTITTRLLVPSNKVGCLLGQGGHIITE 1146
I+VS + P +P SPTI+A++ L ++E +TTRL+VPSNKVGC++G+GG +ITE
Sbjct: 343 IVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITE 402
Query: 1145 MRRRCQADIRVISKDGKPTCASADEELVQISGNVNVARNALTEIASRLRVRSLEGVHAAA 966
MRRR A+IRV SK KP S DEELVQ++G +AR ALTEIASRLR R+L ++
Sbjct: 403 MRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSN 462
Query: 965 EPGPMGPFQG 936
P P PF G
Sbjct: 463 NPTPFAPFDG 472
Score = 77.8 bits (190), Expect = 2e-11
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = -2
Query: 794 AGPAGYPNLNSSMEVKIPNTAINAVLGAGGSNISSIGQLTGAKVKLNDPQAGVSECIVEI 615
+G GYP S+E +IPN+ + +V+GAGG N++ I Q++GA+VKL++ G SE IVEI
Sbjct: 668 SGLTGYPG--GSVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVEI 725
Query: 614 HGSSDQMIAAQNLLHNFIASAAHN 543
G DQ+ AAQ+LL FI +++++
Sbjct: 726 QGIPDQVKAAQSLLQGFIGASSNS 749