BLASTX nr result
ID: Cocculus22_contig00003133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00003133
(851 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi... 392 e-107
gb|EXB96384.1| hypothetical protein L484_023104 [Morus notabilis] 371 e-100
ref|XP_007049761.1| Pentatricopeptide repeat-containing protein,... 369 e-100
ref|XP_006354206.1| PREDICTED: pentatricopeptide repeat-containi... 369 1e-99
ref|XP_004228653.1| PREDICTED: pentatricopeptide repeat-containi... 367 2e-99
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi... 365 9e-99
ref|XP_006443594.1| hypothetical protein CICLE_v10019744mg [Citr... 362 1e-97
ref|XP_004514268.1| PREDICTED: pentatricopeptide repeat-containi... 361 2e-97
ref|XP_002303044.1| pentatricopeptide repeat-containing family p... 361 2e-97
ref|XP_007140612.1| hypothetical protein PHAVU_008G126700g [Phas... 360 4e-97
ref|XP_007199950.1| hypothetical protein PRUPE_ppb003056mg [Prun... 359 6e-97
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,... 357 4e-96
ref|XP_006280306.1| hypothetical protein CARUB_v10026229mg, part... 355 2e-95
ref|XP_004299861.1| PREDICTED: pentatricopeptide repeat-containi... 352 1e-94
ref|XP_006395140.1| hypothetical protein EUTSA_v10004021mg [Eutr... 351 2e-94
ref|XP_002863920.1| pentatricopeptide repeat-containing protein ... 350 3e-94
dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana] 350 5e-94
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar... 350 5e-94
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi... 344 2e-92
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi... 344 2e-92
>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product
[Vitis vinifera]
Length = 497
Score = 392 bits (1007), Expect = e-107
Identities = 188/239 (78%), Positives = 213/239 (89%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
R+ EMESTL+EMLRE +C+PDVWTMNSTLRAFGSSGQIETME+CYEKFQSAGI+P+IKTF
Sbjct: 259 RFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTF 318
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGKAE Y+KMSAVMEYMQKY+FSWT+VTYNVVIDAFGRAGDLKQMEYLFRLMRS
Sbjct: 319 NILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRS 378
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKP+C+T+CSLVRAYGRAG +KI GVLRFI+NSDV LD FFNCLVDAYGRLGC AE
Sbjct: 379 ERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAE 438
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPNTR 717
+GVLEMM KKGCKPDK+TY TMIKAY G++S A+EL G++ +E L M +P+ R
Sbjct: 439 MKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLMRMPDETRLEMGKPDFR 497
Score = 84.7 bits (208), Expect = 4e-14
Identities = 59/268 (22%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSA-GIQPSIKTFNI 186
E L + ++ C + + L A+ SG + EK ++ QP + T+++
Sbjct: 155 EKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSV 214
Query: 187 LLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRA----------------- 315
L+ S + + K+ ++ M VTYN +IDA+G+A
Sbjct: 215 LIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREG 274
Query: 316 -------------------GDLKQMEYLFRLMRSERIKPNCITMCSLVRAYGRAGAKDKI 438
G ++ ME + +S I+PN T L+ +YG+A +K+
Sbjct: 275 KCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKM 334
Query: 439 AGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKA 618
+ V+ ++ + +N ++DA+GR G L + + +M + KP VT ++++A
Sbjct: 335 SAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRA 394
Query: 619 YARNGVSSRARELNGIISRKEENTLLMD 702
Y R G +A ++ G++ E + +++D
Sbjct: 395 YGRAG---KAEKIGGVLRFIENSDVMLD 419
>gb|EXB96384.1| hypothetical protein L484_023104 [Morus notabilis]
Length = 490
Score = 371 bits (953), Expect = e-100
Identities = 174/231 (75%), Positives = 205/231 (88%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
++ EME+ L+EML+++EC+PDVWTMNSTLRAFG SGQIETME+CY+KFQ AGI+P+IKTF
Sbjct: 250 KFAEMEAVLVEMLQQEECEPDVWTMNSTLRAFGGSGQIETMEKCYDKFQRAGIEPNIKTF 309
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGKA +Y+KM AVMEYMQKY++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLMRS
Sbjct: 310 NILLDSYGKAGEYEKMGAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRS 369
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKP+C+T+CSLVRAY +AG +KI GVLRFI+NSDVTLDT FFNCLVDAYGRLGCLAE
Sbjct: 370 ERIKPSCVTLCSLVRAYAQAGKPEKIGGVLRFIENSDVTLDTIFFNCLVDAYGRLGCLAE 429
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTL 693
+ VLEMM + GCKPDKVTY TMIKAY+ NG++ +A+EL I +E L
Sbjct: 430 MKEVLEMMKQNGCKPDKVTYRTMIKAYSSNGMAGQAKELRNFIESEEGRQL 480
Score = 75.5 bits (184), Expect = 2e-11
Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 78/304 (25%)
Frame = +1
Query: 25 LMEMLREQECQPDVWTMNST---LRAFGSSGQIETMEQCYEKFQSA---GIQPSIKTFNI 186
+ E+LREQ +W ++ ++ G+ + E+ +E FQ+ G + +++
Sbjct: 115 VFELLREQ-----LWYRPNSSVYIKLIVMLGKCKQPEKAFELFQTMVEEGCPVNHESYTA 169
Query: 187 LLDSYGKAEDYKKMSAVMEYM------QKYYFSWTV------------------------ 276
LL +YG++ + + +++EYM Q ++TV
Sbjct: 170 LLSAYGRSTRFNQAFSLLEYMKNTPDLQPDVHTYTVLIKSCLHFSDFDKVEALLSDMEAQ 229
Query: 277 ------VTYNVVIDAFGRAGDLKQME-YLFRLMRSERIKPNCITMCSLVRA--------- 408
VTYNV+IDA+G+A +ME L +++ E +P+ TM S +RA
Sbjct: 230 GIRPSTVTYNVLIDAYGKARKFAEMEAVLVEMLQQEECEPDVWTMNSTLRAFGGSGQIET 289
Query: 409 --------------------------YGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVD 510
YG+AG +K+ V+ ++ + +N ++D
Sbjct: 290 MEKCYDKFQRAGIEPNIKTFNILLDSYGKAGEYEKMGAVMEYMQKYHYSWTIVTYNVVID 349
Query: 511 AYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENT 690
A+GR G L + + +M + KP VT ++++AYA+ G + ++ G++ E +
Sbjct: 350 AFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAQAG---KPEKIGGVLRFIENSD 406
Query: 691 LLMD 702
+ +D
Sbjct: 407 VTLD 410
>ref|XP_007049761.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508702022|gb|EOX93918.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 515
Score = 369 bits (948), Expect = e-100
Identities = 177/238 (74%), Positives = 207/238 (86%)
Frame = +1
Query: 4 YGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFN 183
+ EME TL+EMLRE++C PDVWTMNST+RAFGSSGQIETME+CYEKFQ AGIQP+IKTFN
Sbjct: 277 FQEMEMTLVEMLREKDCGPDVWTMNSTIRAFGSSGQIETMEKCYEKFQRAGIQPNIKTFN 336
Query: 184 ILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 363
ILLDSYGK +Y KMSAVMEYMQKY++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLMRSE
Sbjct: 337 ILLDSYGKTGNYDKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 396
Query: 364 RIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAET 543
RIKP+C+T+CSLVRAYG+AG +KIAGVLRFI+NSDVTLDT FFNCLVDAYGR+GC +E
Sbjct: 397 RIKPSCVTLCSLVRAYGQAGKAEKIAGVLRFIENSDVTLDTVFFNCLVDAYGRMGCFSEM 456
Query: 544 RGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPNTR 717
+GVLEMM +KG KPDKVTY TMIKAY+ + ++S +EL ++ L M +P+ R
Sbjct: 457 KGVLEMMKQKGYKPDKVTYRTMIKAYSISRMTSHVKELRDLLESASGTPLGMPKPDFR 514
>ref|XP_006354206.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Solanum tuberosum]
Length = 488
Score = 369 bits (946), Expect = 1e-99
Identities = 169/228 (74%), Positives = 204/228 (89%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
R+ EMESTL+EMLR ++C+PDVWTMNSTLRAFG SGQIE ME+CYEKFQSAGI+PSIKTF
Sbjct: 259 RFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEKFQSAGIEPSIKTF 318
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGK E+Y+KM AVME+MQKYYFSWT+VTYN+VIDAFGRAGDLKQME+LFRLM+S
Sbjct: 319 NILLDSYGKTENYEKMGAVMEFMQKYYFSWTIVTYNIVIDAFGRAGDLKQMEFLFRLMQS 378
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKPNC+T+CSLVRAYG+AG +K+ VLRFI+NSDV LDT FFNCLVDAYG +GC E
Sbjct: 379 ERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNCLVDAYGMMGCFTE 438
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEE 684
+GVLEMM++ GCKPDK+TY +MIKAY+ NG++++A EL +++ E+
Sbjct: 439 LKGVLEMMEQSGCKPDKITYRSMIKAYSINGMTNKASELRNLLASLEK 486
>ref|XP_004228653.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Solanum lycopersicum]
Length = 488
Score = 367 bits (943), Expect = 2e-99
Identities = 169/228 (74%), Positives = 204/228 (89%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
R+ EMESTL+EMLR ++C+PDVWTMNSTLRAFG SGQIE ME+CYEKFQSAGI+PSIKTF
Sbjct: 259 RFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEKFQSAGIEPSIKTF 318
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGK E+Y+KM AVME+MQKY+FSWT+VTYN+VIDAFGRAGDLKQME+LFRLM+S
Sbjct: 319 NILLDSYGKTENYEKMGAVMEFMQKYHFSWTIVTYNIVIDAFGRAGDLKQMEFLFRLMQS 378
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKPNC+T+CSLVRAYG+AG +K+ VLRFI+NSDV LDT FFNCLVDAYG +GC E
Sbjct: 379 ERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNCLVDAYGMMGCFTE 438
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEE 684
+GVLEMM++ GCKPDK+TY +MIKAY+ NG++++A EL I++ E+
Sbjct: 439 LKGVLEMMEQSGCKPDKITYRSMIKAYSVNGMTNKASELRNILASLEK 486
>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 365 bits (938), Expect = 9e-99
Identities = 171/237 (72%), Positives = 204/237 (86%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
++ EMES L+EML ++ CQPDVWTMNSTLRAFG+ GQIETME+CYEKFQ+AGIQP+++TF
Sbjct: 278 KFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTF 337
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGKA+DYKKMSAVMEYMQKY++SWT+VT+N+VIDAFG+AGDLKQMEYLFRLMRS
Sbjct: 338 NILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRS 397
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKP+C+T+CSLVRAY RAG +KI+GVLRF++NSDV LDT FFNCLVDAY RLGCLAE
Sbjct: 398 ERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAE 457
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
+GVLEMM + GCKPD VTY TMIK Y G+ S A+EL ++ L D+P+
Sbjct: 458 MKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRELLPTVNRPPLKRDKPD 514
>ref|XP_006443594.1| hypothetical protein CICLE_v10019744mg [Citrus clementina]
gi|567902214|ref|XP_006443595.1| hypothetical protein
CICLE_v10019744mg [Citrus clementina]
gi|568851175|ref|XP_006479269.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568851177|ref|XP_006479270.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557545856|gb|ESR56834.1| hypothetical protein
CICLE_v10019744mg [Citrus clementina]
gi|557545857|gb|ESR56835.1| hypothetical protein
CICLE_v10019744mg [Citrus clementina]
Length = 517
Score = 362 bits (928), Expect = 1e-97
Identities = 168/236 (71%), Positives = 203/236 (86%)
Frame = +1
Query: 4 YGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFN 183
+ EME TL++ML E +C+PDVWTMN TLRAFG+SGQI+TME+CYEKFQSAGIQPSI TFN
Sbjct: 282 FAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFN 340
Query: 184 ILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 363
ILLDSYGKA ++KMSAVMEYMQKY++SWT+VTYN+VIDAFGRAGDLKQMEYLFRLMRSE
Sbjct: 341 ILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGDLKQMEYLFRLMRSE 400
Query: 364 RIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAET 543
RIKP+C+T+CSLVRAYG AG +K+ VLRFIDNSD+ LDT FFNCLVDAYGRL C AE
Sbjct: 401 RIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFNCLVDAYGRLKCFAEM 460
Query: 544 RGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
+GVLE+M ++GCKPDKVTY TM++AY+ NG+ + A+E ++ + +E L M P+
Sbjct: 461 KGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLVEKMDETCLAMKRPD 516
Score = 76.3 bits (186), Expect = 1e-11
Identities = 61/240 (25%), Positives = 97/240 (40%), Gaps = 37/240 (15%)
Frame = +1
Query: 25 LMEMLREQEC-QPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNILLDSY 201
+ E+LREQ +P+ + G Q E + ++ G + ++F LL +Y
Sbjct: 146 VFELLREQLWYKPNAAVYVKLIVMLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAY 205
Query: 202 G------------------------------------KAEDYKKMSAVMEYMQKYYFSWT 273
G KA + K+ A++ M
Sbjct: 206 GRSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPN 265
Query: 274 VVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPNCITMCSLVRAYGRAGAKDKIAGVLR 453
VTYN +IDA+GRA +ME M SE +P+ TM +RA+G +G D +
Sbjct: 266 TVTYNTLIDAYGRAKMFAEMELTLVKMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 325
Query: 454 FIDNSDVTLDTTFFNCLVDAYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKAYARNG 633
++ + FN L+D+YG+ G + V+E M K VTY+ +I A+ R G
Sbjct: 326 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 385
>ref|XP_004514268.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cicer arietinum]
Length = 520
Score = 361 bits (926), Expect = 2e-97
Identities = 169/237 (71%), Positives = 205/237 (86%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
R+ EMESTL+EML EQECQPDVWTMNSTLRAFG+ GQIETME+CY+KFQ++GIQP+++TF
Sbjct: 283 RFSEMESTLLEMLAEQECQPDVWTMNSTLRAFGNLGQIETMERCYDKFQTSGIQPNVQTF 342
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGKA D+ KMSAVMEYMQKY++SWT+VTYN+VIDAFG+AG+LKQMEYLFRLMRS
Sbjct: 343 NILLDSYGKACDFTKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGNLKQMEYLFRLMRS 402
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKP+C+T+CSLVRAY AG +KI GVLRF+DNSDVTLDT FFNCLVDAY RL CL E
Sbjct: 403 ERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVDNSDVTLDTVFFNCLVDAYVRLDCLDE 462
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
+GVLE+M++KGCKPD +TY TMIKAY+ G+ S +EL ++ + L ++P+
Sbjct: 463 MKGVLEIMEQKGCKPDFITYRTMIKAYSSKGMQSHVKELRELLITVKRPPLERNKPD 519
>ref|XP_002303044.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222844770|gb|EEE82317.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 485
Score = 361 bits (926), Expect = 2e-97
Identities = 169/226 (74%), Positives = 200/226 (88%)
Frame = +1
Query: 4 YGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFN 183
+ EME+TLMEML +Q+C+PDVWTMNST+RAFG SGQ+E ME CYEKFQSAGI+P+IKTFN
Sbjct: 249 FAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFN 308
Query: 184 ILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 363
ILLDSYGKA +Y+KMSAVMEYMQ+Y++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLMRSE
Sbjct: 309 ILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 368
Query: 364 RIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAET 543
RIKP+C+T+CSLVRAY AG +KI VLRFI+NSDVTLDT FFNCLVDAYGRL C AE
Sbjct: 369 RIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNCLVDAYGRLECFAEM 428
Query: 544 RGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKE 681
+ VLE+M++KGCKPDKVTY TMIKAY+ G++S A++L ++ E
Sbjct: 429 KEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSVE 474
Score = 59.3 bits (142), Expect = 2e-06
Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%)
Frame = +1
Query: 25 LMEMLREQEC-QPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNILLDSY 201
+ E+LREQ +P + G Q + Q ++ G + +++ LL +Y
Sbjct: 126 VFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAY 185
Query: 202 GKAEDYKKMSAVMEYMQKY-YFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPN 378
G++ + K ++ME M+ V TY+++I + + +++ L M S I+PN
Sbjct: 186 GRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPN 245
Query: 379 CI-----------------------TMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTT 489
+ TM S +RA+G +G + + ++ + +
Sbjct: 246 TVTFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIK 305
Query: 490 FFNCLVDAYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKAYARNG 633
FN L+D+YG+ G + V+E M + VTY+ +I A+ R G
Sbjct: 306 TFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAG 353
>ref|XP_007140612.1| hypothetical protein PHAVU_008G126700g [Phaseolus vulgaris]
gi|561013745|gb|ESW12606.1| hypothetical protein
PHAVU_008G126700g [Phaseolus vulgaris]
Length = 513
Score = 360 bits (924), Expect = 4e-97
Identities = 165/237 (69%), Positives = 205/237 (86%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
++ EMES L+EML +++CQPD WTMNSTLRAFG+ GQIETME+CYEKFQ+AGIQP+++TF
Sbjct: 276 KFSEMESILVEMLADRDCQPDAWTMNSTLRAFGNIGQIETMEKCYEKFQTAGIQPNVQTF 335
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGKAE+YKKMSAVMEYMQ+Y++SWT+VT+N+VIDAFG+AGDLKQMEYLFRLMRS
Sbjct: 336 NILLDSYGKAEEYKKMSAVMEYMQRYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRS 395
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKP+C+T+CSLVRAY AG +KI GV+RF++NSDV LDT FFNCLVDAYGRLGCLAE
Sbjct: 396 ERIKPSCVTLCSLVRAYAHAGKPEKIGGVMRFVENSDVLLDTVFFNCLVDAYGRLGCLAE 455
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
+GV EMM + GCKPD +TY TMIKAY+ G+ + A+E+ ++ +L D+P+
Sbjct: 456 MKGVPEMMKQSGCKPDIITYRTMIKAYSFKGMDAHAKEIRELLPTVTRPSLRRDKPD 512
Score = 87.0 bits (214), Expect = 8e-15
Identities = 58/257 (22%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Frame = +1
Query: 43 EQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSA-GIQPSIKTFNILLDSYGKAEDY 219
++ C D + + L A+ SG ++ E+ ++ G QP ++T++IL+ S + +
Sbjct: 183 DEGCVLDCESYTALLSAYSRSGLLDKAFTLLEEMKNTPGCQPDVQTYSILIKSCLQVFAF 242
Query: 220 KKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRA---------------------------- 315
K+ ++ M + VTYN +IDA+G+A
Sbjct: 243 DKVQGLLSDMANHGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRDCQPDAWTMNS 302
Query: 316 --------GDLKQMEYLFRLMRSERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSD 471
G ++ ME + ++ I+PN T L+ +YG+A K++ V+ ++
Sbjct: 303 TLRAFGNIGQIETMEKCYEKFQTAGIQPNVQTFNILLDSYGKAEEYKKMSAVMEYMQRYH 362
Query: 472 VTLDTTFFNCLVDAYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRAR 651
+ FN ++DA+G+ G L + + +M + KP VT ++++AYA G +
Sbjct: 363 YSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAG---KPE 419
Query: 652 ELNGIISRKEENTLLMD 702
++ G++ E + +L+D
Sbjct: 420 KIGGVMRFVENSDVLLD 436
>ref|XP_007199950.1| hypothetical protein PRUPE_ppb003056mg [Prunus persica]
gi|462395350|gb|EMJ01149.1| hypothetical protein
PRUPE_ppb003056mg [Prunus persica]
Length = 547
Score = 359 bits (922), Expect = 6e-97
Identities = 169/227 (74%), Positives = 200/227 (88%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
R+ EMESTL+EML EQ+C+PDVWTMNS LRAFG+SGQIETME+C+EKFQSAGIQ +I TF
Sbjct: 307 RFAEMESTLVEMLGEQDCEPDVWTMNSILRAFGNSGQIETMEKCFEKFQSAGIQANIMTF 366
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGKA +Y+KMSAVMEYMQKY++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLMRS
Sbjct: 367 NILLDSYGKAGNYEKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRS 426
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ER+KP+C+T+CSLVRAYG AG +KI GVLRF++NSDV LD FFNCLVDAYGR+GC AE
Sbjct: 427 ERMKPSCVTLCSLVRAYGLAGLPEKIDGVLRFVENSDVMLDIVFFNCLVDAYGRMGCFAE 486
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKE 681
+GVLE+M++KGC+PDKVTY TMIKAY+ N + +EL ++ E
Sbjct: 487 MKGVLEIMEQKGCRPDKVTYRTMIKAYSANKMIGHVKELRELMESTE 533
Score = 100 bits (248), Expect = 9e-19
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 35/263 (13%)
Frame = +1
Query: 19 STLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNILLDS 198
S L +M +CQPDV T + +++ + ++ +S GI+P+ T+N L+D+
Sbjct: 208 SLLEQMKNTPDCQPDVHTYSILIKSCLQVFAYDKVQALLSDMESQGIRPNTITYNTLIDA 267
Query: 199 YGKAEDYKKM----------SAVMEYMQKYYF-------------------------SWT 273
YGK++ Y + S EY K +
Sbjct: 268 YGKSKKYSLISFPFNILNAPSISCEYHNKLFILNVFFPKRFAEMESTLVEMLGEQDCEPD 327
Query: 274 VVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPNCITMCSLVRAYGRAGAKDKIAGVLR 453
V T N ++ AFG +G ++ ME F +S I+ N +T L+ +YG+AG +K++ V+
Sbjct: 328 VWTMNSILRAFGNSGQIETMEKCFEKFQSAGIQANIMTFNILLDSYGKAGNYEKMSAVME 387
Query: 454 FIDNSDVTLDTTFFNCLVDAYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKAYARNG 633
++ + +N ++DA+GR G L + + +M + KP VT ++++AY G
Sbjct: 388 YMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERMKPSCVTLCSLVRAY---G 444
Query: 634 VSSRARELNGIISRKEENTLLMD 702
++ +++G++ E + +++D
Sbjct: 445 LAGLPEKIDGVLRFVENSDVMLD 467
>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 636
Score = 357 bits (915), Expect = 4e-96
Identities = 164/221 (74%), Positives = 197/221 (89%)
Frame = +1
Query: 4 YGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFN 183
+ EME+TL++ML +Q C+PDVWTMNSTLRAFG SGQIETME+CYEKFQ AGI+PSI TFN
Sbjct: 277 FEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFN 336
Query: 184 ILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 363
+LLDSYGKA DYKKMSAVMEYMQKY++SWT++TYN+VIDAFGRAGDLKQMEYLFRLMRSE
Sbjct: 337 VLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSE 396
Query: 364 RIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAET 543
RIKP+C+T+CSLVRAYG+A +KI GVLRFI+NSD+TLDT FFNCLVDAYGR+GC AE
Sbjct: 397 RIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEM 456
Query: 544 RGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGI 666
+GVL +M++KG +PDK+TY TMIKAY+ G++ +EL +
Sbjct: 457 KGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDL 497
>ref|XP_006280306.1| hypothetical protein CARUB_v10026229mg, partial [Capsella rubella]
gi|482549010|gb|EOA13204.1| hypothetical protein
CARUB_v10026229mg, partial [Capsella rubella]
Length = 521
Score = 355 bits (910), Expect = 2e-95
Identities = 166/234 (70%), Positives = 203/234 (86%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNIL 189
EMESTL++ML E +C+PD WTMNSTLRAFG +GQIE ME CYEKFQS+GI+P+I+TFNIL
Sbjct: 287 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 346
Query: 190 LDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSERI 369
LDSYGK+ +YKKMSAVMEYMQKY FSWT+VTYNVVIDAFGRAGDLKQMEYLFRLM+SERI
Sbjct: 347 LDSYGKSGNYKKMSAVMEYMQKYQFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 406
Query: 370 KPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRG 549
KP+C+T+CSLVRAYGRAG DK+ GVLRFI+NSD+ LD FFNCLVDAYGR+ AE +G
Sbjct: 407 KPSCVTLCSLVRAYGRAGKADKLGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 466
Query: 550 VLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
VLE+M+KKG KPDKVTY TM+KAY +G+++ +EL+G++ E +++ +P+
Sbjct: 467 VLELMEKKGFKPDKVTYRTMVKAYRISGMTTHVKELHGVVDSVGEAQVVLRKPD 520
>ref|XP_004299861.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 503
Score = 352 bits (903), Expect = 1e-94
Identities = 162/223 (72%), Positives = 197/223 (88%)
Frame = +1
Query: 1 RYGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTF 180
R+ EMESTL+ ML +++C+PDVWTMNS +RAFGSSGQIETME+C+E+F SAGIQP+I TF
Sbjct: 264 RFAEMESTLVAMLSQRDCEPDVWTMNSVVRAFGSSGQIETMEKCFERFHSAGIQPNIMTF 323
Query: 181 NILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRS 360
NILLDSYGK+ +YKKMSAVMEYMQKY++SWT+VTYNVVIDAFGRAGDL QMEYLFRLM+S
Sbjct: 324 NILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLTQMEYLFRLMQS 383
Query: 361 ERIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAE 540
ERIKP+C+T+CSLVRAYG+AG +KI GVL F++NSDV LD FFNCLVDAYGRLGC E
Sbjct: 384 ERIKPSCVTLCSLVRAYGKAGKPEKIGGVLCFVENSDVKLDAVFFNCLVDAYGRLGCFTE 443
Query: 541 TRGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGII 669
+GVLEMM++KGC PDK+TY TMIKAY+ N ++ +EL+ ++
Sbjct: 444 MKGVLEMMEQKGCSPDKITYRTMIKAYSFNKMTGHVKELHELL 486
Score = 85.5 bits (210), Expect = 2e-14
Identities = 57/268 (21%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSA-GIQPSIKTFNI 186
E L + + ++ C + + + A+G S + E+ + QP + T++I
Sbjct: 160 EKAEELFQAMIDEGCGVSHESYTALISAYGRSSIFDKAFSLLEQMKDTPDCQPDVHTYSI 219
Query: 187 LLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVID---------------------- 300
L+ S Y ++ A++ M+ + +TYN +ID
Sbjct: 220 LIKSCLHVFAYDRVQALLSDMETQHIRPNTITYNTLIDAYGKSKRFAEMESTLVAMLSQR 279
Query: 301 --------------AFGRAGDLKQMEYLFRLMRSERIKPNCITMCSLVRAYGRAGAKDKI 438
AFG +G ++ ME F S I+PN +T L+ +YG++G K+
Sbjct: 280 DCEPDVWTMNSVVRAFGSSGQIETMEKCFERFHSAGIQPNIMTFNILLDSYGKSGNYKKM 339
Query: 439 AGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRGVLEMMDKKGCKPDKVTYSTMIKA 618
+ V+ ++ + +N ++DA+GR G L + + +M + KP VT ++++A
Sbjct: 340 SAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLTQMEYLFRLMQSERIKPSCVTLCSLVRA 399
Query: 619 YARNGVSSRARELNGIISRKEENTLLMD 702
Y + G + ++ G++ E + + +D
Sbjct: 400 YGKAG---KPEKIGGVLCFVENSDVKLD 424
>ref|XP_006395140.1| hypothetical protein EUTSA_v10004021mg [Eutrema salsugineum]
gi|557091779|gb|ESQ32426.1| hypothetical protein
EUTSA_v10004021mg [Eutrema salsugineum]
Length = 513
Score = 351 bits (901), Expect = 2e-94
Identities = 162/234 (69%), Positives = 204/234 (87%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNIL 189
EMESTL++ML E++C+PD WTMNSTLRAFG +GQIE ME CY+KFQS+GI+P+I+TFNIL
Sbjct: 279 EMESTLIQMLGEEDCKPDSWTMNSTLRAFGGTGQIEMMENCYDKFQSSGIEPNIRTFNIL 338
Query: 190 LDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSERI 369
LDSYGK +YKKMSAVME+MQKY++SWT++TYNVVIDAFGRAGDLKQMEYLFRLM+SERI
Sbjct: 339 LDSYGKTGNYKKMSAVMEFMQKYHYSWTIITYNVVIDAFGRAGDLKQMEYLFRLMQSERI 398
Query: 370 KPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRG 549
KP+C+T+CSLVRAYGRAG +KI GVLRFI+NSD+ LD FFNCLVDAYGR+ AE +G
Sbjct: 399 KPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 458
Query: 550 VLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
VLE+M+KKG KPDK+TY TM+KAY +G++S +EL+G++ E +++ +P+
Sbjct: 459 VLEIMEKKGFKPDKITYRTMVKAYRISGMTSHVKELHGMVESVGEAQVVLKKPD 512
>ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309755|gb|EFH40179.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 498
Score = 350 bits (899), Expect = 3e-94
Identities = 164/234 (70%), Positives = 202/234 (86%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNIL 189
EMESTL++ML E +C+PD WTMNSTLRAFG +GQIE ME CYEKFQS+GI+P+I+TFNIL
Sbjct: 264 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 323
Query: 190 LDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSERI 369
LDSYGK+ +YKKMSAVMEYMQKY++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLM+SERI
Sbjct: 324 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 383
Query: 370 KPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRG 549
P+C+T+CSLVRAYGRAG DKI GVLRFI+NSD+ LD FFNCLVDAYGR+ AE +G
Sbjct: 384 IPSCVTLCSLVRAYGRAGKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 443
Query: 550 VLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
VLE+M+KKG KPDK+TY TM+KAY +G+++ +EL+G+ E +++ +P+
Sbjct: 444 VLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVGESVGETQVVLKKPD 497
>dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana]
Length = 495
Score = 350 bits (897), Expect = 5e-94
Identities = 163/234 (69%), Positives = 202/234 (86%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNIL 189
EMESTL++ML E +C+PD WTMNSTLRAFG +GQIE ME CYEKFQS+GI+P+I+TFNIL
Sbjct: 261 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 320
Query: 190 LDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSERI 369
LDSYGK+ +YKKMSAVMEYMQKY++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLM+SERI
Sbjct: 321 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 380
Query: 370 KPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRG 549
P+C+T+CSLVRAYGRA DKI GVLRFI+NSD+ LD FFNCLVDAYGR+ AE +G
Sbjct: 381 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 440
Query: 550 VLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
VLE+M+KKG KPDK+TY TM+KAY +G+++ +EL+G++ E +++ +P+
Sbjct: 441 VLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEAQVVVKKPD 494
>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 350 bits (897), Expect = 5e-94
Identities = 163/234 (69%), Positives = 202/234 (86%)
Frame = +1
Query: 10 EMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFNIL 189
EMESTL++ML E +C+PD WTMNSTLRAFG +GQIE ME CYEKFQS+GI+P+I+TFNIL
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNIL 333
Query: 190 LDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSERI 369
LDSYGK+ +YKKMSAVMEYMQKY++SWT+VTYNVVIDAFGRAGDLKQMEYLFRLM+SERI
Sbjct: 334 LDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Query: 370 KPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRG 549
P+C+T+CSLVRAYGRA DKI GVLRFI+NSD+ LD FFNCLVDAYGR+ AE +G
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 550 VLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKEENTLLMDEPN 711
VLE+M+KKG KPDK+TY TM+KAY +G+++ +EL+G++ E +++ +P+
Sbjct: 454 VLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVGEAQVVVKKPD 507
>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 344 bits (883), Expect = 2e-92
Identities = 158/226 (69%), Positives = 196/226 (86%)
Frame = +1
Query: 4 YGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFN 183
+ EMES L++ML + C+PDVWTMNSTLRAFG SGQ+ETME+CYEKFQ AGIQPSI+TFN
Sbjct: 277 FAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFN 336
Query: 184 ILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 363
ILLDSYGKAE Y+KMSAVMEYMQKY++SWT+VTYN+VIDAFGRAG+LKQME+LFRLMRSE
Sbjct: 337 ILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSE 396
Query: 364 RIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAET 543
RIKP+C+T+CSLVRAYG+AG ++KI VL ++NSD+ LDT F+NCLVDAYGRL C AE
Sbjct: 397 RIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEM 456
Query: 544 RGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKE 681
+ VL MM+++GCKPDK TY TM +AY+ G+++ A+E+ +I+ E
Sbjct: 457 KKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 502
Score = 81.6 bits (200), Expect = 3e-13
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Frame = +1
Query: 25 LMEMLREQECQPDVWTMNSTLRAFGSSGQI-ETMEQCYEKFQSAGIQPSIKTFNILLDSY 201
L + + E+ C+ + + L A+ SG + E E S QP + T++IL+ S
Sbjct: 177 LFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSC 236
Query: 202 GKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQME-YLFRLMRSERIKPN 378
+ + K ++ M +TYN IDA+G+A +ME L ++ + KP+
Sbjct: 237 LQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPD 296
Query: 379 CITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRGVLE 558
TM S +RA+GR+G + + + + FN L+D+YG+ + V+E
Sbjct: 297 VWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVME 356
Query: 559 MMDKKGCKPDKVTYSTMIKAYARNG 633
M K VTY+ +I A+ R G
Sbjct: 357 YMQKYHYSWTIVTYNIVIDAFGRAG 381
>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 344 bits (883), Expect = 2e-92
Identities = 158/226 (69%), Positives = 196/226 (86%)
Frame = +1
Query: 4 YGEMESTLMEMLREQECQPDVWTMNSTLRAFGSSGQIETMEQCYEKFQSAGIQPSIKTFN 183
+ EMES L++ML + C+PDVWTMNSTLRAFG SGQ+ETME+CYEKFQ AGIQPSI+TFN
Sbjct: 222 FAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFN 281
Query: 184 ILLDSYGKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQMEYLFRLMRSE 363
ILLDSYGKAE Y+KMSAVMEYMQKY++SWT+VTYN+VIDAFGRAG+LKQME+LFRLMRSE
Sbjct: 282 ILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSE 341
Query: 364 RIKPNCITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAET 543
RIKP+C+T+CSLVRAYG+AG ++KI VL ++NSD+ LDT F+NCLVDAYGRL C AE
Sbjct: 342 RIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEM 401
Query: 544 RGVLEMMDKKGCKPDKVTYSTMIKAYARNGVSSRARELNGIISRKE 681
+ VL MM+++GCKPDK TY TM +AY+ G+++ A+E+ +I+ E
Sbjct: 402 KKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITTAE 447
Score = 81.6 bits (200), Expect = 3e-13
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 2/205 (0%)
Frame = +1
Query: 25 LMEMLREQECQPDVWTMNSTLRAFGSSGQI-ETMEQCYEKFQSAGIQPSIKTFNILLDSY 201
L + + E+ C+ + + L A+ SG + E E S QP + T++IL+ S
Sbjct: 122 LFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSC 181
Query: 202 GKAEDYKKMSAVMEYMQKYYFSWTVVTYNVVIDAFGRAGDLKQME-YLFRLMRSERIKPN 378
+ + K ++ M +TYN IDA+G+A +ME L ++ + KP+
Sbjct: 182 LQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPD 241
Query: 379 CITMCSLVRAYGRAGAKDKIAGVLRFIDNSDVTLDTTFFNCLVDAYGRLGCLAETRGVLE 558
TM S +RA+GR+G + + + + FN L+D+YG+ + V+E
Sbjct: 242 VWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVME 301
Query: 559 MMDKKGCKPDKVTYSTMIKAYARNG 633
M K VTY+ +I A+ R G
Sbjct: 302 YMQKYHYSWTIVTYNIVIDAFGRAG 326