BLASTX nr result

ID: Cnidium21_contig00047827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047827
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   149   2e-34
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   143   1e-32
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   142   2e-32
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   142   2e-32
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   141   5e-32

>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/122 (60%), Positives = 88/122 (72%)
 Frame = +1

Query: 1    LASQFKIKDLGPLKYFLGLEIARSTSGIYVNQRKYTLDILKDTGLQQCNSTCIPMEQHHK 180
            LAS F +KDLGPLKYFLG+E+ARST+GIY+ QRKY LDI+ +TGL        P+EQ+HK
Sbjct: 1037 LASCFHMKDLGPLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGVKPANFPLEQNHK 1096

Query: 181  XXXXXXXXXXXXXXYRRLVGRLIYLTITRPDLSYPVHILAQFMSSPREAHWQAALKVVRY 360
                          YRRLVGRLIYL +TR DL++ VHILA+FM  PRE HW AAL+VVRY
Sbjct: 1097 LGLSTSPLLTDPQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRY 1156

Query: 361  LK 366
            LK
Sbjct: 1157 LK 1158


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  143 bits (361), Expect = 1e-32
 Identities = 68/118 (57%), Positives = 87/118 (73%)
 Frame = +1

Query: 13   FKIKDLGPLKYFLGLEIARSTSGIYVNQRKYTLDILKDTGLQQCNSTCIPMEQHHKXXXX 192
            FK+KDLG LKYFLG+E+ARS++G+++ QRKYTLDI+ +TGL        P+EQ+H+    
Sbjct: 1169 FKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSETGLLGAKPCGFPIEQNHRLGLA 1228

Query: 193  XXXXXXXXXXYRRLVGRLIYLTITRPDLSYPVHILAQFMSSPREAHWQAALKVVRYLK 366
                      YRRLVGRLIYL +TRPDL+Y VHI++QFM  PR  HW+AAL+VVRYLK
Sbjct: 1229 NGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHIISQFMQEPRIEHWEAALRVVRYLK 1286


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  142 bits (359), Expect = 2e-32
 Identities = 69/122 (56%), Positives = 88/122 (72%)
 Frame = +1

Query: 1    LASQFKIKDLGPLKYFLGLEIARSTSGIYVNQRKYTLDILKDTGLQQCNSTCIPMEQHHK 180
            L+  FK+KDLG LKYFLG+E+ARS++G+++ QRKYTLDI+ + GL        P+EQ+H+
Sbjct: 803  LSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHR 862

Query: 181  XXXXXXXXXXXXXXYRRLVGRLIYLTITRPDLSYPVHILAQFMSSPREAHWQAALKVVRY 360
                          YRRLVGRLIYL +TRPDL+Y VHIL+QFM  PR  HW+AAL+VVRY
Sbjct: 863  LGLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRY 922

Query: 361  LK 366
            LK
Sbjct: 923  LK 924


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/122 (57%), Positives = 89/122 (72%)
 Frame = +1

Query: 1    LASQFKIKDLGPLKYFLGLEIARSTSGIYVNQRKYTLDILKDTGLQQCNSTCIPMEQHHK 180
            L+  FK+KDLG LKYFLG+E+ARS++G+++ QRKYTLDI+ + GL        P+EQ+H+
Sbjct: 882  LSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIEQNHR 941

Query: 181  XXXXXXXXXXXXXXYRRLVGRLIYLTITRPDLSYPVHILAQFMSSPREAHWQAALKVVRY 360
                          YRRLVGRLIYL +TRPDL+Y VHIL+QFM  PR  HW+AAL+VVRY
Sbjct: 942  LXLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRY 1001

Query: 361  LK 366
            LK
Sbjct: 1002 LK 1003


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/118 (57%), Positives = 84/118 (71%)
 Frame = +1

Query: 13   FKIKDLGPLKYFLGLEIARSTSGIYVNQRKYTLDILKDTGLQQCNSTCIPMEQHHKXXXX 192
            F +KDLG LKYFLGLE++R   G  ++QRKY LDI+K+TGL  C  + +P+  +HK    
Sbjct: 1204 FHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASI 1263

Query: 193  XXXXXXXXXXYRRLVGRLIYLTITRPDLSYPVHILAQFMSSPREAHWQAALKVVRYLK 366
                      YRRLVGR IYLTITRPDLSY VHIL+QFM +P  AHW+AAL++VRYLK
Sbjct: 1264 TGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLK 1321


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