BLASTX nr result

ID: Cnidium21_contig00047581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00047581
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW60629.1| putative DEAD-box ATP-dependent RNA helicase fami...    57   1e-06
tpg|DAA42781.1| TPA: hypothetical protein ZEAMMB73_445663 [Zea m...    57   2e-06
tpg|DAA54613.1| TPA: hypothetical protein ZEAMMB73_901965 [Zea m...    56   3e-06
gb|AFW77346.1| hypothetical protein ZEAMMB73_150303 [Zea mays]         56   3e-06
gb|AFW70874.1| hypothetical protein ZEAMMB73_053105 [Zea mays]         56   3e-06

>gb|AFW60629.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
           mays]
          Length = 872

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = -2

Query: 285 KIAPCRLCVMNLNSGKVIVARGTAFPPNLPGAGVVHGDQITSDNIKVCVDDVVGDYQTTP 106
           ++  C+L V+ +    V+VARG A+PP      +VHG +   D+ KV VD V  ++   P
Sbjct: 154 EVMKCKL-VVQIGPQSVVVARGQAYPPK--DVVIVHGIERRDDHTKVQVDFVFDNFWEFP 210

Query: 105 LPVPNREHKM--VGEAAGSFVQWPKTLVLL*QDPLL 4
           LP+P     M  +GEA  SFV WPK+ + L ++ ++
Sbjct: 211 LPIPIAGGDMFTLGEAKKSFVLWPKSGIQLAEETIV 246


>tpg|DAA42781.1| TPA: hypothetical protein ZEAMMB73_445663 [Zea mays]
          Length = 390

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = -2

Query: 285 KIAPCRLCVMNLNSGKVIVARGTAFPPNLPGAGVVHGDQITSDNIKVCVDDVVGDYQTTP 106
           ++  C+L V+ +    V+VARG A+PP       VHG +   D+ KV +D V  ++   P
Sbjct: 67  EVMKCKL-VVQIGPQSVVVARGQAYPPK--DVVTVHGIERRDDHTKVQIDFVFDNFLDFP 123

Query: 105 LPVPNREHKM--VGEAAGSFVQWPKTLVLL*QD 13
           LP+P     M  +GEA  SFV WPK+ + L +D
Sbjct: 124 LPIPIAGGDMFTLGEAKHSFVLWPKSGIQLAED 156


>tpg|DAA54613.1| TPA: hypothetical protein ZEAMMB73_901965 [Zea mays]
          Length = 698

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -2

Query: 285 KIAPCRLCVMNLNSGKVIVARGTAFPPNLPGAGVVHGDQITSDNIKVCVDDVVGDYQTTP 106
           ++  C+L V+ +    V+VARG A+PP       VHG +   D+ KV VD V  ++   P
Sbjct: 117 EVIKCKL-VVQIGPQSVVVARGQAYPPK--DVVTVHGIERQDDHTKVQVDFVFDNFLEFP 173

Query: 105 LPVPNREHKM--VGEAAGSFVQWPKTLVLL 22
           LP+P     M  +GEA  SFV WPK+ + L
Sbjct: 174 LPIPIAGGDMFNLGEAKNSFVLWPKSGIQL 203


>gb|AFW77346.1| hypothetical protein ZEAMMB73_150303 [Zea mays]
          Length = 1364

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -2

Query: 285 KIAPCRLCVMNLNSGKVIVARGTAFPPNLPGAGVVHGDQITSDNIKVCVDDVVGDYQTTP 106
           ++  C+L V+ +    V+VARG A+PP       VHG +   D+ KV VD V  ++   P
Sbjct: 385 EVMKCKL-VVQIGPQSVVVARGQAYPPK--DVVTVHGIERRDDHTKVQVDFVFDNFLEFP 441

Query: 105 LPVPNREHKM--VGEAAGSFVQWPKTLVLL 22
           LP+P     M  +GEA  SFV WPK+ + L
Sbjct: 442 LPIPIAGGDMFTLGEAKNSFVLWPKSGIQL 471


>gb|AFW70874.1| hypothetical protein ZEAMMB73_053105 [Zea mays]
          Length = 474

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = -2

Query: 285 KIAPCRLCVMNLNSGKVIVARGTAFPPNLPGAGVVHGDQITSDNIKVCVDDVVGDYQTTP 106
           ++  C+L V+ +    V+VARG A+PP       VHG +   D+ KV VD V  ++   P
Sbjct: 74  EVMKCKL-VVQIGPQSVVVARGQAYPPK--DVVTVHGIERRDDHTKVQVDFVFDNFLEFP 130

Query: 105 LPVPNREHKM--VGEAAGSFVQWPKTLVLL 22
           LP+P     M  +GEA  SFV WPK+ + L
Sbjct: 131 LPIPIAGGDMFTLGEAKNSFVLWPKSGIQL 160


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