BLASTX nr result
ID: Cnidium21_contig00047513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00047513
(349 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi... 152 3e-35
emb|CBI30210.3| unnamed protein product [Vitis vinifera] 152 3e-35
ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28
>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 152 bits (384), Expect = 3e-35
Identities = 75/115 (65%), Positives = 93/115 (80%)
Frame = +2
Query: 5 MYEKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVG 184
MYE+ FELFR M RID FR+DHFTLST+LVA G LASM GREIHA+ +K G + +SV
Sbjct: 252 MYERAFELFRDMRRIDGFRIDHFTLSTILVAARG-LASMVGREIHAHVIKIGFESNISVI 310
Query: 185 NALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRMP 349
NALIRFY+KCG++ VVALF+ MR++DVITWTE++ AYM FGL D A+E F++MP
Sbjct: 311 NALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMP 365
Score = 71.2 bits (173), Expect = 8e-11
Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 EKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLA-SMYGREIHAYALKSGLLTRLSVGN 187
E+ LF C S+++ V ST ++ G+LA G++IH +ALKSG L+ L VGN
Sbjct: 489 EEAISLF-CQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGN 547
Query: 188 ALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
++I YSKC N+ + +F+ M D+++W ++ ++ D+A+ +++M
Sbjct: 548 SIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKM 600
Score = 62.0 bits (149), Expect = 5e-08
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +2
Query: 14 KTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGNAL 193
+ E+F M R ++ F+ +L C L G ++HA +K G L V NAL
Sbjct: 154 QAMEIFFRM-RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNAL 212
Query: 194 IRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
+ Y KCG + SV+ LFD M +D+ +W V+ + + + ++A E F M
Sbjct: 213 MGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDM 263
>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 152 bits (384), Expect = 3e-35
Identities = 75/115 (65%), Positives = 93/115 (80%)
Frame = +2
Query: 5 MYEKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVG 184
MYE+ FELFR M RID FR+DHFTLST+LVA G LASM GREIHA+ +K G + +SV
Sbjct: 270 MYERAFELFRDMRRIDGFRIDHFTLSTILVAARG-LASMVGREIHAHVIKIGFESNISVI 328
Query: 185 NALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRMP 349
NALIRFY+KCG++ VVALF+ MR++DVITWTE++ AYM FGL D A+E F++MP
Sbjct: 329 NALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMP 383
Score = 71.2 bits (173), Expect = 8e-11
Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +2
Query: 11 EKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLA-SMYGREIHAYALKSGLLTRLSVGN 187
E+ LF C S+++ V ST ++ G+LA G++IH +ALKSG L+ L VGN
Sbjct: 507 EEAISLF-CQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGN 565
Query: 188 ALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
++I YSKC N+ + +F+ M D+++W ++ ++ D+A+ +++M
Sbjct: 566 SIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKM 618
Score = 62.0 bits (149), Expect = 5e-08
Identities = 35/111 (31%), Positives = 56/111 (50%)
Frame = +2
Query: 14 KTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGNAL 193
+ E+F M R ++ F+ +L C L G ++HA +K G L V NAL
Sbjct: 172 QAMEIFFRM-RSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNAL 230
Query: 194 IRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
+ Y KCG + SV+ LFD M +D+ +W V+ + + + ++A E F M
Sbjct: 231 MGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDM 281
>ref|XP_002323489.1| predicted protein [Populus trichocarpa] gi|222868119|gb|EEF05250.1|
predicted protein [Populus trichocarpa]
Length = 915
Score = 135 bits (340), Expect = 3e-30
Identities = 64/114 (56%), Positives = 86/114 (75%)
Frame = +2
Query: 8 YEKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGN 187
YEK ELFR +++ F+ D FTLSTLL AC+ A + GREIHAYA++ GL LSV N
Sbjct: 285 YEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSN 344
Query: 188 ALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRMP 349
A+I FY++CG+++ V ALF+ M ++D+ITWTE++ AYM FGLVD AV+ FN+MP
Sbjct: 345 AIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMP 398
Score = 61.2 bits (147), Expect = 8e-08
Identities = 32/98 (32%), Positives = 51/98 (52%)
Frame = +2
Query: 44 RIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGNALIRFYSKCGNV 223
RI + ++ +L AC SL G ++HA A+K G + V NALI Y KCG +
Sbjct: 195 RISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCL 254
Query: 224 SSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESF 337
+ LFD M +D+ +W ++ + + +KA+E F
Sbjct: 255 DHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELF 292
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/106 (29%), Positives = 54/106 (50%)
Frame = +2
Query: 29 FRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGNALIRFYS 208
+RC S +D +++L C G++IH ALK+G L VGN++I YS
Sbjct: 529 YRCQSE-GTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYS 587
Query: 209 KCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
KC N+ + F++M DV++W ++ + D+A+ ++ M
Sbjct: 588 KCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSM 633
>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 129 bits (325), Expect = 2e-28
Identities = 60/116 (51%), Positives = 86/116 (74%)
Frame = +2
Query: 2 FMYEKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSV 181
F Y++ F+ FR M +VDHF+LSTLL AC+GS+ M G+++HA ALK GL + LSV
Sbjct: 276 FKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSV 335
Query: 182 GNALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRMP 349
++LI FY+KCG+ + V LF++M ++DVITWT ++ +YM FG++D AVE FN+MP
Sbjct: 336 SSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMP 391
Score = 68.6 bits (166), Expect = 5e-10
Identities = 31/91 (34%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +2
Query: 77 LSTLLVACSGSLA-SMYGREIHAYALKSGLLTRLSVGNALIRFYSKCGNVSSVVALFDSM 253
+ST +++ GS+ G ++H +ALKSGL+T VGNA + YSKC N+ V +F++M
Sbjct: 536 MSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTM 595
Query: 254 RLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
++D+++W ++ ++ DKA+ + +M
Sbjct: 596 NMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/94 (29%), Positives = 51/94 (54%)
Frame = +2
Query: 65 DHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGNALIRFYSKCGNVSSVVALF 244
+ +T +L AC ++ G ++H +K GLL+ + + NAL+ Y KCG + V+ LF
Sbjct: 195 NEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLF 254
Query: 245 DSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
+ M +D+ +W V+ + + D+A + F M
Sbjct: 255 EEMPERDITSWNTVISSLVKEFKYDEAFDYFRGM 288
>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 129 bits (325), Expect = 2e-28
Identities = 60/116 (51%), Positives = 86/116 (74%)
Frame = +2
Query: 2 FMYEKTFELFRCMSRIDCFRVDHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSV 181
F Y++ F+ FR M +VDHF+LSTLL AC+GS+ M G+++HA ALK GL + LSV
Sbjct: 276 FKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSV 335
Query: 182 GNALIRFYSKCGNVSSVVALFDSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRMP 349
++LI FY+KCG+ + V LF++M ++DVITWT ++ +YM FG++D AVE FN+MP
Sbjct: 336 SSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMP 391
Score = 69.7 bits (169), Expect = 2e-10
Identities = 31/91 (34%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +2
Query: 77 LSTLLVACSGSLA-SMYGREIHAYALKSGLLTRLSVGNALIRFYSKCGNVSSVVALFDSM 253
+ST +++ GS+ G+++H +ALKSGL+T VGNA + YSKC N+ V +F++M
Sbjct: 536 MSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTM 595
Query: 254 RLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
++D+++W ++ ++ DKA+ + +M
Sbjct: 596 NMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626
Score = 57.8 bits (138), Expect = 9e-07
Identities = 28/94 (29%), Positives = 51/94 (54%)
Frame = +2
Query: 65 DHFTLSTLLVACSGSLASMYGREIHAYALKSGLLTRLSVGNALIRFYSKCGNVSSVVALF 244
+ +T +L AC ++ G ++H +K GLL+ + + NAL+ Y KCG + V+ LF
Sbjct: 195 NEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLF 254
Query: 245 DSMRLKDVITWTEVMMAYMAFGLVDKAVESFNRM 346
+ M +D+ +W V+ + + D+A + F M
Sbjct: 255 EEMPERDITSWNTVISSLVKEFKYDEAFDYFRGM 288