BLASTX nr result

ID: Cnidium21_contig00046024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00046024
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]    97   2e-18
ref|XP_002514782.1| chromatin assembly factor 1, subunit A, puta...    88   6e-16
gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]             76   2e-12
gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]      76   2e-12
ref|NP_176725.1| chromatin assembly factor-1 (FASCIATA1) [Arabid...    76   2e-12

>emb|CAN77600.1| hypothetical protein VITISV_008038 [Vitis vinifera]
          Length = 872

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/124 (45%), Positives = 77/124 (62%)
 Frame = +2

Query: 11  LMKASERLGKVLSETAIRLFDDSMVQKNLVDRDEKEGVQETNMLGKRIDXXXXXXXXXXX 190
           L+KASE+L KVL+E  IRL  +SMVQK+  D  EK+  +E  +L K+++           
Sbjct: 217 LIKASEKLAKVLNEADIRLLIESMVQKDGADMAEKDVKREEKILIKQLEKKKREDEKEKK 276

Query: 191 XXDMELQREKLPSEKEVKRLQDVTXXXXXXXXXXXFVLRKQLKRKQEEAEKDLRRRQKEE 370
             + ELQ+EKL +E+E+KRLQD               +RKQL+++QEEAEKD RRR+KEE
Sbjct: 277 RIERELQKEKLQNERELKRLQDEAEKDERRREKEESEIRKQLRKQQEEAEKDQRRREKEE 336

Query: 371 DVLK 382
             LK
Sbjct: 337 AELK 340


>ref|XP_002514782.1| chromatin assembly factor 1, subunit A, putative [Ricinus communis]
           gi|223545833|gb|EEF47336.1| chromatin assembly factor 1,
           subunit A, putative [Ricinus communis]
          Length = 823

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/124 (40%), Positives = 74/124 (59%)
 Frame = +2

Query: 11  LMKASERLGKVLSETAIRLFDDSMVQKNLVDRDEKEGVQETNMLGKRIDXXXXXXXXXXX 190
           LMKASE+L KVL E  IRL  D+++QKN  +  +KE  +E  +L K+++           
Sbjct: 203 LMKASEKLSKVLQEADIRLLVDTLLQKNGAELADKEAKREQKLLIKQLEKNKREVEKEKR 262

Query: 191 XXDMELQREKLPSEKEVKRLQDVTXXXXXXXXXXXFVLRKQLKRKQEEAEKDLRRRQKEE 370
             D+EL +EK  +EKE KRLQ+ T              R+Q++++QEEAEK+ RR+++EE
Sbjct: 263 RMDLELLKEKRQTEKEHKRLQEETEKDEKRREREESETRRQIRKQQEEAEKEQRRKEREE 322

Query: 371 DVLK 382
             LK
Sbjct: 323 AELK 326


>gb|AAB60903.1| F5I14.2 gene product [Arabidopsis thaliana]
          Length = 406

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/127 (36%), Positives = 72/127 (56%)
 Frame = +2

Query: 2   RQLLMKASERLGKVLSETAIRLFDDSMVQKNLVDRDEKEGVQETNMLGKRIDXXXXXXXX 181
           R  L KA+E+LGK+LSE  IR F D+M+QKN  +  EK+  +E  +L K+++        
Sbjct: 202 RSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLLKQLEKNRCEAEK 261

Query: 182 XXXXXDMELQREKLPSEKEVKRLQDVTXXXXXXXXXXXFVLRKQLKRKQEEAEKDLRRRQ 361
                + ++ +EKL  EKE K LQ                 RK++K++Q+E+EK+ +RR+
Sbjct: 262 EKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEET-ESRKRIKKQQDESEKEQKRRE 320

Query: 362 KEEDVLK 382
           KE+  LK
Sbjct: 321 KEQAELK 327


>gb|ADK74335.1| chromatin assembly factor-1 [Arabidopsis thaliana]
          Length = 763

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/127 (36%), Positives = 72/127 (56%)
 Frame = +2

Query: 2   RQLLMKASERLGKVLSETAIRLFDDSMVQKNLVDRDEKEGVQETNMLGKRIDXXXXXXXX 181
           R  L KA+E+LGK+LSE  IR F D+M+QKN  +  EK+  +E  +L K+++        
Sbjct: 202 RSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLLKQLEKNRCEAEK 261

Query: 182 XXXXXDMELQREKLPSEKEVKRLQDVTXXXXXXXXXXXFVLRKQLKRKQEEAEKDLRRRQ 361
                + ++ +EKL  EKE K LQ                 RK++K++Q+E+EK+ +RR+
Sbjct: 262 EKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEET-ESRKRIKKQQDESEKEQKRRE 320

Query: 362 KEEDVLK 382
           KE+  LK
Sbjct: 321 KEQAELK 327


>ref|NP_176725.1| chromatin assembly factor-1 (FASCIATA1) [Arabidopsis thaliana]
           gi|75213311|sp|Q9SXY0.1|FAS1_ARATH RecName:
           Full=Chromatin assembly factor 1 subunit FAS1;
           Short=CAF-1 subunit FAS1; AltName: Full=CAF-1 p150
           homolog; AltName: Full=Protein FASCIATA 1
           gi|4887626|dbj|BAA77811.1| FAS1 [Arabidopsis thaliana]
           gi|22022526|gb|AAM83221.1| At1g65470/F5I14_33
           [Arabidopsis thaliana] gi|332196258|gb|AEE34379.1|
           chromatin assembly factor-1 (FASCIATA1) [Arabidopsis
           thaliana]
          Length = 815

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 46/127 (36%), Positives = 72/127 (56%)
 Frame = +2

Query: 2   RQLLMKASERLGKVLSETAIRLFDDSMVQKNLVDRDEKEGVQETNMLGKRIDXXXXXXXX 181
           R  L KA+E+LGK+LSE  IR F D+M+QKN  +  EK+  +E  +L K+++        
Sbjct: 202 RSDLSKAAEKLGKILSEVDIRSFMDNMMQKNSSEMAEKDSKREEKLLLKQLEKNRCEAEK 261

Query: 182 XXXXXDMELQREKLPSEKEVKRLQDVTXXXXXXXXXXXFVLRKQLKRKQEEAEKDLRRRQ 361
                + ++ +EKL  EKE K LQ                 RK++K++Q+E+EK+ +RR+
Sbjct: 262 EKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEET-ESRKRIKKQQDESEKEQKRRE 320

Query: 362 KEEDVLK 382
           KE+  LK
Sbjct: 321 KEQAELK 327


Top