BLASTX nr result

ID: Cnidium21_contig00045871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00045871
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565695.1| LOB domain-containing protein 12 [Arabidopsis t...   168   5e-40
ref|XP_002879253.1| hypothetical protein ARALYDRAFT_481923 [Arab...   168   5e-40
ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
gb|AAM64523.1| unknown [Arabidopsis thaliana]                         166   2e-39
ref|XP_002440913.1| hypothetical protein SORBIDRAFT_09g016240 [S...   165   3e-39

>ref|NP_565695.1| LOB domain-containing protein 12 [Arabidopsis thaliana]
           gi|29427828|sp|Q8LBW3.2|LBD12_ARATH RecName: Full=LOB
           domain-containing protein 12; AltName: Full=ASYMMETRIC
           LEAVES 2-like protein 5; Short=AS2-like protein 5
           gi|3150407|gb|AAC16959.1| expressed protein [Arabidopsis
           thaliana] gi|45330813|dbj|BAD12425.1| ASYMMETRIC
           LEAVES2-like gene 5 protein [Arabidopsis thaliana]
           gi|219807086|dbj|BAH10549.1| ASYMMETRIC LEAVES2-like 5
           protein [Arabidopsis thaliana]
           gi|330253255|gb|AEC08349.1| LOB domain-containing
           protein 12 [Arabidopsis thaliana]
          Length = 193

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/85 (90%), Positives = 82/85 (96%)
 Frame = +1

Query: 49  GATPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQEIPVQQRGDA 228
           G++PCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHK+FGASNVSKMLQE+PV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 229 VSSLVFEANARSRDPVYGCVGAISY 303
           V+SLVFEANAR RDPVYGCVGAISY
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISY 89


>ref|XP_002879253.1| hypothetical protein ARALYDRAFT_481923 [Arabidopsis lyrata subsp.
           lyrata] gi|297325092|gb|EFH55512.1| hypothetical protein
           ARALYDRAFT_481923 [Arabidopsis lyrata subsp. lyrata]
          Length = 196

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/85 (90%), Positives = 82/85 (96%)
 Frame = +1

Query: 49  GATPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQEIPVQQRGDA 228
           G++PCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHK+FGASNVSKMLQE+PV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 229 VSSLVFEANARSRDPVYGCVGAISY 303
           V+SLVFEANAR RDPVYGCVGAISY
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISY 89


>ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|222845757|gb|EEE83304.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/87 (88%), Positives = 81/87 (93%)
 Frame = +1

Query: 43  MVGATPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQEIPVQQRG 222
           M G++PCASCKLLRRRCAKDCIFAPYFP DDPHKFAIVHKIFGASNVSKMLQEIP+ QR 
Sbjct: 1   MAGSSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKIFGASNVSKMLQEIPIHQRA 60

Query: 223 DAVSSLVFEANARSRDPVYGCVGAISY 303
           DAV SLV+EANAR RDPVYGCVGAISY
Sbjct: 61  DAVGSLVYEANARVRDPVYGCVGAISY 87


>gb|AAM64523.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score =  166 bits (419), Expect = 2e-39
 Identities = 76/85 (89%), Positives = 81/85 (95%)
 Frame = +1

Query: 49  GATPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQEIPVQQRGDA 228
           G++PCASCKLLRRRCAKDCI APYFPPDDPHKFAIVHK+FGASNVSKMLQE+PV QR DA
Sbjct: 5   GSSPCASCKLLRRRCAKDCILAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADA 64

Query: 229 VSSLVFEANARSRDPVYGCVGAISY 303
           V+SLVFEANAR RDPVYGCVGAISY
Sbjct: 65  VNSLVFEANARVRDPVYGCVGAISY 89


>ref|XP_002440913.1| hypothetical protein SORBIDRAFT_09g016240 [Sorghum bicolor]
           gi|241946198|gb|EES19343.1| hypothetical protein
           SORBIDRAFT_09g016240 [Sorghum bicolor]
          Length = 217

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/87 (87%), Positives = 82/87 (94%)
 Frame = +1

Query: 43  MVGATPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKIFGASNVSKMLQEIPVQQRG 222
           M G +PCASCKLLRRRC KDCIFAP+FP DDPHKFAIVHK+FGASNVSKMLQE+PVQQRG
Sbjct: 1   MGGGSPCASCKLLRRRCTKDCIFAPFFPADDPHKFAIVHKVFGASNVSKMLQELPVQQRG 60

Query: 223 DAVSSLVFEANARSRDPVYGCVGAISY 303
           DAVSSLV+EANAR RDPVYGCVGAIS+
Sbjct: 61  DAVSSLVYEANARMRDPVYGCVGAISF 87


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