BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034827
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    84   1e-14
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi...    83   3e-14
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    82   6e-14
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    81   1e-13
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    80   2e-13

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -1

Query: 274  LWHARLGHPSSSVMSQL-KFLPSVETSYFQNCDICHRAKQSRXXXXXXXXXXXXXXXLIH 98
            LWH RLGHPS S    L + LP +      +C IC +AKQ+R               L+H
Sbjct: 769  LWHLRLGHPSFSRFKLLSRLLPDIHKEIGNHCPICPQAKQTRLPFPKSSITTKFPFSLLH 828

Query: 97   CDLWGPYKTCTHGKCNMFLTIVEDVSKCTWVF 2
            CD+WGP+K   H     FLTIV+D S+CTW+F
Sbjct: 829  CDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIF 860


>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1156

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
 Frame = -1

Query: 277 ALWHARLGHPSSSVMSQLKFLPSVETSY-FQNCDICHRAKQSRXXXXXXXXXXXXXXXLI 101
           ALWH RLGHPS SV+S L  L S   S   ++CD+C RAKQ+R               LI
Sbjct: 89  ALWHQRLGHPSFSVLSSLPVLTSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLI 148

Query: 100 HCDLWGPYKTCTHGKCNMFLTIVEDVSKCTWVF 2
           HCD+WGPY+  +      FLTIV+D S+  W +
Sbjct: 149 HCDVWGPYRVPSSCGAVYFLTIVDDFSRAVWTY 181


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
 Frame = -1

Query: 274 LWHARLGHPSSSVMSQL-KFLPSVETSYFQN-CDICHRAKQSRXXXXXXXXXXXXXXXLI 101
           LWH+R+GHP++ V+S + +   SV +++    CD+CHRAKQ+R               LI
Sbjct: 391 LWHSRMGHPAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELI 450

Query: 100 HCDLWGPYKTCTHGKCNMFLTIVEDVSKCTWVF 2
           +CDLWGPY+T +H     FLTI++D S+  W++
Sbjct: 451 YCDLWGPYRTPSHTGARYFLTIIDDYSRGVWLY 483


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = -1

Query: 277 ALWHARLGHPSSSVMSQLK-FLPSVETSYFQNCDICHRAKQSRXXXXXXXXXXXXXXXLI 101
           ALWH RLGHPS SV+S L  F  +  T    +CD+C RAKQ+R               LI
Sbjct: 528 ALWHQRLGHPSFSVLSSLPLFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEECFSLI 587

Query: 100 HCDLWGPYKTCTHGKCNMFLTIVEDVSKCTWVF 2
           HCD+WGPY+         FLTIV+D S+  W +
Sbjct: 588 HCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTY 620


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = -1

Query: 277 ALWHARLGHPSSSVMSQLKFLPSVETSYF-QNCDICHRAKQSRXXXXXXXXXXXXXXXLI 101
           ALWH RLGHPS SV+S L        S   ++CD+C RAKQ+R               LI
Sbjct: 511 ALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLI 570

Query: 100 HCDLWGPYKTCTHGKCNMFLTIVEDVSKCTWVF 2
           HCD+WGPY+  +      FLTIV+D S+  W +
Sbjct: 571 HCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTY 603