BLASTX nr result

ID: Cnidium21_contig00033937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033937
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   230   3e-58
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   228   2e-57
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   188   1e-45
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   185   1e-44
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   184   4e-44

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  230 bits (587), Expect = 3e-58
 Identities = 122/324 (37%), Positives = 174/324 (53%)
 Frame = -3

Query: 979  EHKGIRWIKWDTLCDVKEVGGLGFRRLQEFNVAMLAKHAWRLINNVNPLVTNLIKARYYV 800
            E++GIRWI W+ LC  KE GGLGF+RL+  N AML K AWRL++  N LV          
Sbjct: 274  ENQGIRWISWECLCVSKEFGGLGFKRLRNVNFAMLGKQAWRLLDE-NSLV---------- 322

Query: 799  DTDFLDASLGANPSFMWRSIMASQEIVKQHCRRKIGDGKSTRVWQILWLPCSENGFPTTV 620
                                  ++E++ +  R +IG+                NG  ++ 
Sbjct: 323  ----------------------AREVICRGSRMRIGNA---------------NGMVSSE 345

Query: 619  PPEEIRDIVVHNLMSEDHRSWDVDILNDLFNERDRALIEQIPIPIRSRPDSWYWSLDDKG 440
             PE + D  V  ++  + R WD DIL DLFN RD+ LIE IP+  R+  DSWYW  DDKG
Sbjct: 346  IPEGLEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKG 405

Query: 439  VIIVKSCYRNIRGENINIEGGFWKQLWGLKLPGKIVNLLWRACKNV*PTSSELIKKHVNI 260
              +VK+CYR ++G+    E  FW + W LK+P K+ NL+W+ C N   T+  L  ++V++
Sbjct: 406  NYLVKNCYRLLQGDLGRPETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDL 465

Query: 259  DLLCPWCHLQPETPVHTLFTCTFAKEMWCKVGLQAIIPVDESATVLQVLVKAFSGNNRDK 80
            D LC WC+ +PET  H LF C+ A+E W  +G +   P +  + +   +   F  N+ D 
Sbjct: 466  DPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTE--SPICSWIQNFFIDNHEDT 523

Query: 79   RAIIGLFCWSIWFRRNVWVWNKHS 8
             A + L C S+W +RN WVWNK S
Sbjct: 524  CAKMALVCGSLWNQRNHWVWNKQS 547


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  228 bits (580), Expect = 2e-57
 Identities = 123/327 (37%), Positives = 177/327 (54%), Gaps = 8/327 (2%)
 Frame = -3

Query: 973  KGIRWIKWDTLCDVKEVGGLGFRRLQEFNVAMLAKHAWRLINNVNPLVTNLIKARYYVDT 794
            + IRW+ W  +C  K+ GGLGFR+L +FN+A+LAK  WR + N + LVT + +ARY+ ++
Sbjct: 302  RSIRWMSWGKMCKQKKDGGLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNS 361

Query: 793  DFLDASLGANPSFMWRSIMASQEIVKQHCRRKIGDGKSTRVWQILWLPCSENGFPTTVPP 614
             FL+A LG+NPS+MWRSI+A+Q ++K+ C   I  G   +VW   WLP S N    T P 
Sbjct: 362  SFLNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPV 421

Query: 613  EEIRDIVVHNLMSEDHRSWDVDILNDLFNERDRALIEQIPIPIRSRPDSWYWSLDDKGVI 434
                 I V  L++E    W  D + D F  RD  LI  IP+P+ SR D   WS D +G  
Sbjct: 422  AGFDGIKVDELITEG--LWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDARGEY 479

Query: 433  IVKSCYRNIRGEN-------INIEGGF-WKQLWGLKLPGKIVNLLWRACKNV*PTSSELI 278
              +S Y  +R           +++  F W QLW +  P KI+N  WRA +N  PT   L 
Sbjct: 480  TARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALT 539

Query: 277  KKHVNIDLLCPWCHLQPETPVHTLFTCTFAKEMWCKVGLQAIIPVDESATVLQVLVKAFS 98
             +HV+  + CP C  + ET +H L  C  A+++W + GL  +       + +  L   F+
Sbjct: 540  IRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAML--QGNFGSFVDWLATMFA 597

Query: 97   GNNRDKRAIIGLFCWSIWFRRNVWVWN 17
              +    A     CW +W+RRN  VWN
Sbjct: 598  YCDFVVFAKYLAVCWGLWWRRNDVVWN 624


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  188 bits (478), Expect = 1e-45
 Identities = 102/320 (31%), Positives = 163/320 (50%)
 Frame = -3

Query: 967  IRWIKWDTLCDVKEVGGLGFRRLQEFNVAMLAKHAWRLINNVNPLVTNLIKARYYVDTDF 788
            I W  WD+LC +K  GG+GFR L+ FN A+L + AWRL+   + L+  ++KA+YY + DF
Sbjct: 840  IHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDF 899

Query: 787  LDASLGANPSFMWRSIMASQEIVKQHCRRKIGDGKSTRVWQILWLPCSENGFPTTVPPEE 608
            LDA LG + S+ WRSI +S+ ++K+    +IG+G + R+W+  W+      F T+     
Sbjct: 900  LDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNGTNVRIWEDPWVLDELGRFITSEKHGN 959

Query: 607  IRDIVVHNLMSEDHRSWDVDILNDLFNERDRALIEQIPIPIRSRPDSWYWSLDDKGVIIV 428
            +   +V  L+  D   W V ++  +FNERD   I  IP+      D   W+        V
Sbjct: 960  LN--MVSELIDFDRMEWKVSLIETVFNERDIKCILSIPLSSLPLKDELTWAFTKNAHYSV 1017

Query: 427  KSCYRNIRGENINIEGGFWKQLWGLKLPGKIVNLLWRACKNV*PTSSELIKKHVNIDLLC 248
            K+ Y   +G N++     W  +W +++  K+ + LWR   N  P  S L  +H+  D LC
Sbjct: 1018 KTAYMLGKGGNLDSFHQAWIDIWSMEVSPKVKHFLWRLGTNTLPVRSLLKHRHMLDDDLC 1077

Query: 247  PWCHLQPETPVHTLFTCTFAKEMWCKVGLQAIIPVDESATVLQVLVKAFSGNNRDKRAII 68
            P    +PE+  H +F C F +++W   G      +     + + LV +  G +   R   
Sbjct: 1078 PRGCGEPESQFHAIFGCPFIRDLWVDSGCDNFRALTTDTAMTEALVNS-HGLDASVRTKG 1136

Query: 67   GLFCWSIWFRRNVWVWNKHS 8
                W +W  RN  V+N+ S
Sbjct: 1137 AFMAWVLWSERNSIVFNQSS 1156


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  185 bits (470), Expect = 1e-44
 Identities = 102/319 (31%), Positives = 158/319 (49%), Gaps = 2/319 (0%)
 Frame = -3

Query: 967  IRWIKWDTLCDVKEVGGLGFRRLQEFNVAMLAKHAWRLINNVNPLVTNLIKARYYVDTDF 788
            I W  WD++C++K  GG+GF+ L  FN A+L + AWRL      L+  ++KA+Y+ + DF
Sbjct: 840  IHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDF 899

Query: 787  LDASLGANPSFMWRSIMASQEIVKQHCRRKIGDGKSTRVWQILWLPCSENGFPTTVPPEE 608
            L+A LG + S+ W SI +S+ ++K+    ++G+G    +W   W+      F T+ P   
Sbjct: 900  LNAPLGHSSSYSWSSIWSSKALLKEGVIWRVGNGSQINMWSDPWVLDEGGRFLTSTPHAS 959

Query: 607  IRDIVVHNLMSEDHRSWDVDILNDLFNERDRALIEQIPIPIRSRPDSWYWSLDDKGVIIV 428
            IR   V  L+  D   W   +L    NERD   I   P+     PD   W+        V
Sbjct: 960  IR--WVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAFTKDATYSV 1017

Query: 427  KSCYRNIRGENINIEGGFWKQLWGLKLPGKIVNLLWRACKNV*PTSSELIKKHVNIDLLC 248
            K+ Y   +G N++     W  +W L +  K+ + LWR C    P  S L  +H+  D LC
Sbjct: 1018 KTAYMIGKGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLPVRSLLKHRHLTDDDLC 1077

Query: 247  PWCHLQPETPVHTLFTCTFAKEMWCKVGLQAIIPVDESATVLQVLV--KAFSGNNRDKRA 74
            PW   + ET  H +F C   +++W   G Q +   D S ++  +LV  ++  G  R K A
Sbjct: 1078 PWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASMSMCDLLVSWRSLDGKLRIKGA 1137

Query: 73   IIGLFCWSIWFRRNVWVWN 17
             +    W IW  RN  ++N
Sbjct: 1138 YL---AWCIWGERNAKIFN 1153


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  184 bits (466), Expect = 4e-44
 Identities = 102/342 (29%), Positives = 176/342 (51%), Gaps = 16/342 (4%)
 Frame = -3

Query: 979  EHKGIRWIKWDTLCDVKEVGGLGFRRLQEFNVAMLAKHAWRLINNVNPLVTNLIKARYYV 800
            E + + W+ W+ L   K+ GGLG R    FN A+LAK AWR++   + L+  +IK +Y+ 
Sbjct: 841  EERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFP 900

Query: 799  DTDFLDASLGANPSFMWRSIMASQEIVKQHCRRKIGDGKSTRVWQILWLPCSE--NGFPT 626
             ++FL+A +  N SF  +SI++++ ++++   R IGDG+ T +W   W+P  E  +   T
Sbjct: 901  RSNFLEARVSPNMSFTCKSILSARAVIQKGMCRVIGDGRDTTIWGDPWVPSLERYSIAAT 960

Query: 625  TVPPEEIRDIVVHNLMSEDHRSWDVDILNDLFNERDRALIEQIPIPIRSRPDSWYWSLDD 446
                E+     V  L+S D   W+V++LN LF   +   I++IP+ ++ +PD W W +  
Sbjct: 961  EGVSEDDGPQKVCELISNDR--WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSK 1018

Query: 445  KGVIIVKSCY------------RNIRGENINIEGGFWKQLWGLKLPGKIVNLLWRACKNV 302
             G   V+S Y               RG N+ +    W+++W  K+P K+    W+A  N 
Sbjct: 1019 NGQFTVRSAYYHELLEDRKTGPSTSRGPNLKL----WQKIWKAKIPPKVKLFSWKAIHNG 1074

Query: 301  *PTSSELIKKHVNIDLLCPWCHLQPETPVHTLFTCTFAKEMWCKVGLQAIIPVDESATVL 122
                + + K+ +NID  CP C  + ET  H ++ C  +   W    L+ I   +  A   
Sbjct: 1075 LAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLR-IHTGNIEAGSF 1133

Query: 121  QVLVKAFSGNNRDKR--AIIGLFCWSIWFRRNVWVWNKHSMS 2
            ++ V++    ++D    A+  + CW+IW  RN WV+ K  ++
Sbjct: 1134 RIWVESLLDTHKDTEWWALFWMICWNIWLGRNKWVFEKKKLA 1175


Top