BLASTX nr result

ID: Cnidium21_contig00033516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00033516
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37573.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...    81   8e-14
ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...    77   1e-12
ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communi...    77   1e-12

>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/99 (46%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
 Frame = +1

Query: 25  RCSSPKQDHQDS-----NSERFSLANWFFMDGSFRGTATWPEEKLPLWDVPAAEQDDESW 189
           R S P QDH ++     +SERFSL NWF MDGS RG ATWPEEKLPLW  P  +      
Sbjct: 563 RQSPPTQDHLEATSWIRDSERFSLGNWFSMDGSCRGGATWPEEKLPLWGAPEHDHHHHDH 622

Query: 190 SNXXXXXXXXXXSISQDSKYLPATWGLVIVTAGSDGMIR 306
                         + +   L   WGLVI TAG DG IR
Sbjct: 623 QQQQQHNDVQ----NHNHLALSEAWGLVIATAGWDGTIR 657


>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/99 (46%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
 Frame = +1

Query: 25  RCSSPKQDHQDS-----NSERFSLANWFFMDGSFRGTATWPEEKLPLWDVPAAEQDDESW 189
           R S P QDH ++     +SERFSL NWF MDGS RG ATWPEEKLPLW  P  +      
Sbjct: 569 RQSPPTQDHLEATSWIRDSERFSLGNWFSMDGSCRGGATWPEEKLPLWGAPEHDHHHHDH 628

Query: 190 SNXXXXXXXXXXSISQDSKYLPATWGLVIVTAGSDGMIR 306
                         + +   L   WGLVI TAG DG IR
Sbjct: 629 QQQQQHNDVQ----NHNHLALSEAWGLVIATAGWDGTIR 663


>ref|XP_002328477.1| predicted protein [Populus trichocarpa] gi|222838192|gb|EEE76557.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/84 (53%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
 Frame = +1

Query: 61  NSERFSLANWFFMDGSFRGT-ATWPEEKLPLWDVPAAEQDDESWSNXXXXXXXXXXSI-S 234
           +SERFSL +WFFMDG  RG+ ATWPEEKLP+WDVP     D  + N           + S
Sbjct: 563 DSERFSLGSWFFMDGRCRGSYATWPEEKLPMWDVPVL---DAEYQNQQIKSLHQQQCVNS 619

Query: 235 QDSKYLPATWGLVIVTAGSDGMIR 306
            D   L   WGLVIVTAG DG IR
Sbjct: 620 NDHISLSEAWGLVIVTAGWDGKIR 643


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
           gi|449507515|ref|XP_004163054.1| PREDICTED:
           uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = +1

Query: 64  SERFSLANWFFMDGSFRGTATWPEEKLPLWDVPAAEQDDESWS--NXXXXXXXXXXSISQ 237
           ++RFSL+NWF  DG FRG+ATWPEE+LPLWD+P  E ++ S    +              
Sbjct: 576 TDRFSLSNWFSADGLFRGSATWPEERLPLWDLPITEDENGSLQHHDCHQKKLNSHRDAHN 635

Query: 238 DSKYLPATWGLVIVTAGSDGMIR 306
           D   L  TWGLV+V AG DG I+
Sbjct: 636 DGSQL-ETWGLVMVVAGLDGTIK 657


>ref|XP_002517227.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543598|gb|EEF45127.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 654

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/97 (45%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
 Frame = +1

Query: 25  RCSSPKQDHQDSNSERFSLANWFFMDGSFRG-TATWPEEKLPLWDVPAAEQD--DESWSN 195
           R  S +   +  +SERFSL NWFF+DG  RG +ATWPEEKLP WD+  AE++   + + N
Sbjct: 552 RMPSEEGTSRRRDSERFSLGNWFFIDGPCRGSSATWPEEKLPHWDIAMAEEECQHQHYEN 611

Query: 196 XXXXXXXXXXSISQDSKYLPATWGLVIVTAGSDGMIR 306
                       +     LP  WGLVI TAG DG IR
Sbjct: 612 FQQQLIK-----THGHTTLPNAWGLVIATAGWDGTIR 643


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