BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00029093
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330612.1| tubulin, beta chain [Populus trichocarpa] gi...   206   1e-51
gb|ABK94893.1| unknown [Populus trichocarpa]                          206   1e-51
sp|Q6VAF7.1|TBB5_GOSHI RecName: Full=Tubulin beta-5 chain; AltNa...   204   8e-51
ref|XP_003563397.1| PREDICTED: LOW QUALITY PROTEIN: tubulin beta...   204   8e-51
gb|AEN19686.1| beta-tubulin [Cymbidium faberi]                        204   8e-51

>ref|XP_002330612.1| tubulin, beta chain [Populus trichocarpa]
           gi|222872170|gb|EEF09301.1| tubulin, beta chain [Populus
           trichocarpa]
          Length = 445

 Score =  206 bits (525), Expect = 1e-51
 Identities = 96/106 (90%), Positives = 102/106 (96%)
 Frame = -3

Query: 319 MREILHIQGGQCGNQIGAKFWEVICDEHAINQSGSYDGTDNDLQLDRINVYYNEASGGRY 140
           MREILHIQGGQCGNQIGAKFWEVICDEH I+QSG Y G D+DLQL+RINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQSGRYSG-DSDLQLERINVYYNEASGGRY 59

Query: 139 VPRAVLVDLEPGTMDAVRTGPFGQIFRPDNFVFGQSGAGNNWAKGH 2
           VPRAVL+DLEPGTMD+VR+GPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105


>gb|ABK94893.1| unknown [Populus trichocarpa]
          Length = 232

 Score =  206 bits (525), Expect = 1e-51
 Identities = 96/106 (90%), Positives = 102/106 (96%)
 Frame = -3

Query: 319 MREILHIQGGQCGNQIGAKFWEVICDEHAINQSGSYDGTDNDLQLDRINVYYNEASGGRY 140
           MREILHIQGGQCGNQIGAKFWEVICDEH I+QSG Y G D+DLQL+RINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQSGRYSG-DSDLQLERINVYYNEASGGRY 59

Query: 139 VPRAVLVDLEPGTMDAVRTGPFGQIFRPDNFVFGQSGAGNNWAKGH 2
           VPRAVL+DLEPGTMD+VR+GPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105


>sp|Q6VAF7.1|TBB5_GOSHI RecName: Full=Tubulin beta-5 chain; AltName: Full=Beta-5-tubulin
           gi|37529494|gb|AAQ92665.1| beta-tubulin 5 [Gossypium
           hirsutum]
          Length = 445

 Score =  204 bits (518), Expect = 8e-51
 Identities = 93/106 (87%), Positives = 102/106 (96%)
 Frame = -3

Query: 319 MREILHIQGGQCGNQIGAKFWEVICDEHAINQSGSYDGTDNDLQLDRINVYYNEASGGRY 140
           MREILHIQGGQCGNQIGAKFWEVICDEH ++ +G Y+G D+DLQL+RINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNG-DSDLQLERINVYYNEASGGRY 59

Query: 139 VPRAVLVDLEPGTMDAVRTGPFGQIFRPDNFVFGQSGAGNNWAKGH 2
           VPRAVL+DLEPGTMD+VR+GPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105


>ref|XP_003563397.1| PREDICTED: LOW QUALITY PROTEIN: tubulin beta-1 chain-like
           [Brachypodium distachyon]
          Length = 446

 Score =  204 bits (518), Expect = 8e-51
 Identities = 94/106 (88%), Positives = 102/106 (96%)
 Frame = -3

Query: 319 MREILHIQGGQCGNQIGAKFWEVICDEHAINQSGSYDGTDNDLQLDRINVYYNEASGGRY 140
           MREILHIQGGQCGNQIGAKFWEVICDEH I+Q+G Y G D+DLQL+RINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAG-DSDLQLERINVYYNEASGGRY 59

Query: 139 VPRAVLVDLEPGTMDAVRTGPFGQIFRPDNFVFGQSGAGNNWAKGH 2
           VPRAVL+DLEPGTMD+VR+GP+GQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGH 105


>gb|AEN19686.1| beta-tubulin [Cymbidium faberi]
          Length = 351

 Score =  204 bits (518), Expect = 8e-51
 Identities = 94/106 (88%), Positives = 101/106 (95%)
 Frame = -3

Query: 319 MREILHIQGGQCGNQIGAKFWEVICDEHAINQSGSYDGTDNDLQLDRINVYYNEASGGRY 140
           MREILHIQGGQCGNQIGAKFWEVICDEH I+ +G Y G D+DLQL+RINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSG-DSDLQLERINVYYNEASGGRY 59

Query: 139 VPRAVLVDLEPGTMDAVRTGPFGQIFRPDNFVFGQSGAGNNWAKGH 2
           VPRAVL+DLEPGTMD+VR+GPFGQIFRPDNFVFGQSGAGNNWAKGH
Sbjct: 60  VPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGH 105