BLASTX nr result

ID: Cnidium21_contig00025081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025081
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   278   2e-72
ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|2...   253   9e-65
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...   248   3e-63
ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...   246   8e-63
ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-...   243   7e-62

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  278 bits (711), Expect = 2e-72
 Identities = 152/318 (47%), Positives = 193/318 (60%), Gaps = 1/318 (0%)
 Frame = -1

Query: 1170 DIFRTHILTRLDGSSLVSTGSAASELNKFCKDENLWKNICNSTWPSTDDRRLLDIIDTFP 991
            DI +THILTRLDG +L + G+A+S+L+     + LW++IC STWPS +D  L  ++  FP
Sbjct: 14   DIIQTHILTRLDGPTLAAAGAASSQLHALATVDKLWRDICTSTWPSLNDPTLQALVSAFP 73

Query: 990  AGYRSFFSDCYPSLNHSPNPKVHLDQEIDHHCSLKISELISAVDIHYDNKLIYSKVHATE 811
             G+RSFFSD YP L H  +      ++I    S    ELISAVDIHY N LI+SKV ATE
Sbjct: 74   GGHRSFFSDSYPLLAHPLDQYHGQSRKIPPTTSSPTLELISAVDIHYKNSLIFSKVEATE 133

Query: 810  TSTDWFLSFPFRVDLLDPKETIPTPVPVLEGNADLFRSQLDQNLTLSWILFDPVSRRAAN 631
            T T WF   PFRVDLLDPK+T+PTPV         + S L+  LTLSWIL DP  +RAAN
Sbjct: 134  TITGWFQCSPFRVDLLDPKDTVPTPVQYSVDGDYKWLSHLEDTLTLSWILIDPTRKRAAN 193

Query: 630  LSSLTPVSVERHWLNEDVRAHYMTYLPGFFVGKSLEFVQCSIVVVCGG-TGGDLQVKEVS 454
            LSSL PVSV+RHWL  +V+  Y T + G     S E VQC IVV C G  GG++QV+EV+
Sbjct: 194  LSSLRPVSVKRHWLTGEVQVRYATVVGGDRTVGS-EVVQCGIVVTCAGKEGGEMQVREVN 252

Query: 453  LQVQDMDGKSFNGRESLVLLHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 274
            LQV+DM+G+  NG+ESLV+L EA                                     
Sbjct: 253  LQVEDMEGRHLNGKESLVILQEALENGRRKKAKGEEGKARYERYLEMMGERRERRLRREK 312

Query: 273  XMDMVCMLTGVTIFMAFF 220
             +DMVC+  GVTIF++F+
Sbjct: 313  TLDMVCIALGVTIFLSFW 330


>ref|XP_002333634.1| predicted protein [Populus trichocarpa] gi|222837892|gb|EEE76257.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  253 bits (645), Expect = 9e-65
 Identities = 136/262 (51%), Positives = 177/262 (67%), Gaps = 2/262 (0%)
 Frame = -1

Query: 1170 DIFRTHILTRLDGSSLVSTGSAASELNKFCKDENLWKNICNSTWPSTDDRRLLDIIDTFP 991
            DI + HIL RLDG SLVST   ++ELN     ++LW NIC+S WPST+  R+ +II   P
Sbjct: 32   DILQAHILNRLDGLSLVSTACTSTELNSLASQQDLWTNICHSIWPSTNTPRIREIISRLP 91

Query: 990  AGYRSFFSDCYPSLNHSPNPKVHLDQEIDHHCSLKISELISAVDIHYDNKLIYSKVHATE 811
            +G+RS FS+ +P    +  P+V+  ++ DH      SELISAVDIHY NKLI+SKV  TE
Sbjct: 92   SGWRSLFSESFPL---TTGPRVNPPRDHDHP-----SELISAVDIHYKNKLIFSKVVETE 143

Query: 810  TSTDWFLSFPFRVDLLDPKETIPTPVPVLEGNADLFRSQLDQNLTLSWILFDPVSRRAAN 631
            TS+ WFL  PFR+D+LDPK+T PTP+P   G+ +  R  L  +L+LSWIL DP   R+ N
Sbjct: 144  TSSSWFLCSPFRIDMLDPKDTCPTPIP-NSGSEETCR-DLAGDLSLSWILLDPTRLRSVN 201

Query: 630  LSSLTPVSVERHWLNEDVRAHYMTYLPGFFVGKSLEFVQCSIVVVCGG--TGGDLQVKEV 457
            LSS  PVSV+RHWL+ +V A + T L     G + E VQC IVV CGG   GG++QV+ V
Sbjct: 202  LSSHKPVSVQRHWLSGEVHARFATVLAAGERGSASESVQCGIVVTCGGGAQGGEMQVRGV 261

Query: 456  SLQVQDMDGKSFNGRESLVLLH 391
            SLQV+DMDG   NG+ SL +L+
Sbjct: 262  SLQVEDMDGVFLNGKGSLGVLN 283


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
            gi|222837621|gb|EEE75986.1| f-box family protein [Populus
            trichocarpa]
          Length = 342

 Score =  248 bits (632), Expect = 3e-63
 Identities = 134/325 (41%), Positives = 190/325 (58%), Gaps = 2/325 (0%)
 Frame = -1

Query: 1170 DIFRTHILTRLDGSSLVSTGSAASELNKFCKDENLWKNICNSTWPSTDDRRLLDIIDTFP 991
            DI +THILT LDG +L +T  A+SEL     ++ LW+NIC S+WPS +D  +  II TF 
Sbjct: 28   DILQTHILTLLDGPTLAATACASSELYALSTEDKLWRNICTSSWPSINDPTVSSIISTFS 87

Query: 990  AGYRSFFSDCYPSLNHSPNPKVHLDQEIDHHCSLKISELISAVDIHYDNKLIYSKVHATE 811
            +G+RSFFSD YP L+H  +    L    ++        L+SAVDI+Y +  I+SKV   E
Sbjct: 88   SGHRSFFSDSYPLLHHHHHSSSFLTTSTEY--------LVSAVDIYYKDVAIFSKVEKNE 139

Query: 810  TSTDWFLSFPFRVDLLDPKETIPTPVPVLEGNADLFRSQLDQNLTLSWILFDPVSRRAAN 631
            T TDWF   PFRVD+L+PKE + T +    G  D F  QL++N+TLSWIL DP  RRA N
Sbjct: 140  TLTDWFKCSPFRVDMLEPKEFVQTLIQYQTGEKDSFVKQLEENMTLSWILIDPKRRRAMN 199

Query: 630  LSSLTPVSVERHWLNEDVRAHYMTYLPGFFVGKSLEFVQCSIVVVCG-GTGGDLQVKEVS 454
            LSS  PVSV+RHWL  +V   + T + G   G   EFV+C ++V CG   GG+++V+E+S
Sbjct: 200  LSSGRPVSVQRHWLTGEVVVKFATIMAG--DGGEKEFVECGVMVCCGKKEGGEMEVREIS 257

Query: 453  LQVQDMDGKSFNGRESLVLLHEA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277
            + ++DM+G++  G+ESLV++ EA                                     
Sbjct: 258  MGMEDMEGRNLTGKESLVVIQEAMERGERRKGKCGTEGKGRYEEFVERKRERKARKQKME 317

Query: 276  XXMDMVCMLTGVTIFMAFFGLLWLR 202
              +DMVC++TG+TIF++ +  +  R
Sbjct: 318  KVLDMVCIVTGITIFVSSWSFILFR 342


>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
            gi|223536939|gb|EEF38577.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 338

 Score =  246 bits (628), Expect = 8e-63
 Identities = 137/325 (42%), Positives = 190/325 (58%), Gaps = 2/325 (0%)
 Frame = -1

Query: 1170 DIFRTHILTRLDGSSLVSTGSAASELNKFCKDENLWKNICNSTWPSTDDRRLLDIIDTFP 991
            DI +THILTRLDG +L S   A+S+ +     + LW+NIC+ TWPST+D  L  +I +FP
Sbjct: 22   DILQTHILTRLDGPTLASLSCASSDFHTLSSQDKLWQNICSFTWPSTNDPLLSSVISSFP 81

Query: 990  AGYRSFFSDCYPSLNHSPNPKVHLDQEIDHHCSLKISELISAVDIHYDNKLIYSKVHATE 811
            +G+RSFFSD +P L H       L            +ELISAVDI+Y N  I+SKV  TE
Sbjct: 82   SGHRSFFSDSFPLLRHHRPTCRTLPTPFP-----STTELISAVDIYYRNVPIFSKVEKTE 136

Query: 810  TSTDWFLSFPFRVDLLDPKETIPTPVPVLEGNADLFRSQLDQNLTLSWILFDPVSRRAAN 631
            T + WFL  PFR+DLL+PKE +PT +    G  D +  QL++++TLSWIL DP  +RA N
Sbjct: 137  TVSRWFLCSPFRIDLLEPKEFVPTWIQ-KAGEKDSWLKQLEEDVTLSWILIDPEQKRAVN 195

Query: 630  LSSLTPVSVERHWLNEDVRAHYMTYLPG-FFVGKSLEFVQCSIVVVCGG-TGGDLQVKEV 457
            +SS  PVSV+RHWL  +V+A + T   G    G   E+V+C +VV CGG  GG+++V++V
Sbjct: 196  ISSKRPVSVQRHWLTGEVQAKFATIFAGDRGKGSETEYVECEVVVTCGGKEGGEVRVRDV 255

Query: 456  SLQVQDMDGKSFNGRESLVLLHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 277
            S+ ++DM+GK+  G +SLV+L EA                                    
Sbjct: 256  SMGMEDMEGKALTGEDSLVILKEA--TERGERRRGEDGKERYKEFLKRKREWKERKERRE 313

Query: 276  XXMDMVCMLTGVTIFMAFFGLLWLR 202
              +D VC+ TGVT F+AF+  +  R
Sbjct: 314  SVLDWVCIATGVTSFLAFWSFILFR 338


>ref|XP_004168870.1| PREDICTED: probable F-box protein At1g60180-like, partial [Cucumis
            sativus]
          Length = 320

 Score =  243 bits (620), Expect = 7e-62
 Identities = 122/266 (45%), Positives = 179/266 (67%), Gaps = 4/266 (1%)
 Frame = -1

Query: 1170 DIFRTHILTRLDGSSLVSTGSAASELNKFCKDENLWKNICNSTWPSTDDRRLLDIIDTFP 991
            DI +THILTRLDG++L ST S +S       ++ LW+ +C+++WPS    +L  +I  FP
Sbjct: 20   DILQTHILTRLDGAALTSTASTSSRFRSLSSEDQLWRRVCSTSWPSITHPKLQQLISAFP 79

Query: 990  AGYRSFFSDCYPSLNHSPNPKVHLDQEIDHHCSLKISELISAVDIHYDNKLIYSKVHATE 811
            + ++SFFSD +P L+        L  ++D+  S  + ELISAVDIHY NKL++SKVH+ E
Sbjct: 80   SKHQSFFSDVFPVLDCCS-----LRCDLDYRYSTTV-ELISAVDIHYKNKLLFSKVHSIE 133

Query: 810  TSTDWFLSFPFRVDLLDPKETIPTPVPVLEGNADLFRSQLDQNLTLSWILFDPVSRRAAN 631
            T T+WFL  PFRVDL+DPK++IP+P+   E   D +   L++NLT+SW++ DP+  RAAN
Sbjct: 134  TETNWFLCSPFRVDLIDPKDSIPSPIRRSEKYED-WLGHLEENLTVSWVIIDPIKNRAAN 192

Query: 630  LSSLTPVSVERHWLNEDVRAHYMTYLPG-FFVGKSLEFVQCSIVVVCG---GTGGDLQVK 463
            +SS  PV V RHWL+ +++  Y T + G    G ++E V+C++VV CG     G ++ V 
Sbjct: 193  ISSRQPVKVRRHWLSGEIQVQYTTVMGGDRRAGSAVEMVECAVVVSCGEKEEEGMEMSVT 252

Query: 462  EVSLQVQDMDGKSFNGRESLVLLHEA 385
            EVS+Q+ DM+GK  NG++SL +L EA
Sbjct: 253  EVSMQMLDMEGKHLNGKDSLGILKEA 278


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