BLASTX nr result

ID: Cnidium21_contig00023465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023465
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]   127   9e-28
emb|CBI16013.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   117   1e-24
ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sati...   117   1e-24
ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223...   117   1e-24

>ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/90 (74%), Positives = 73/90 (81%)
 Frame = +1

Query: 118 LDEILLVESGNSTSGLIEGSGTSEQQQKEAWAVSGGSESIAARFHDLIPDKALDFPFELD 297
           LDEIL VESG S  GL   S    +Q+KEAWAVSGG+E IA  FH+L+PD ALDFPFELD
Sbjct: 324 LDEILSVESG-SKPGLDGTSDDGGRQKKEAWAVSGGNEGIADHFHELVPDMALDFPFELD 382

Query: 298 AFQKEAIYYLEKGNSVFVAAHTSAGKTAVA 387
            FQKEAIYYLEKG+SVFVAAHTSAGKT VA
Sbjct: 383 TFQKEAIYYLEKGDSVFVAAHTSAGKTVVA 412


>emb|CBI16013.3| unnamed protein product [Vitis vinifera]
          Length = 1082

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/90 (74%), Positives = 73/90 (81%)
 Frame = +1

Query: 118 LDEILLVESGNSTSGLIEGSGTSEQQQKEAWAVSGGSESIAARFHDLIPDKALDFPFELD 297
           LDEIL VESG S  GL   S    +Q+KEAWAVSGG+E IA  FH+L+PD ALDFPFELD
Sbjct: 86  LDEILSVESG-SKPGLDGTSDDGGRQKKEAWAVSGGNEGIADHFHELVPDMALDFPFELD 144

Query: 298 AFQKEAIYYLEKGNSVFVAAHTSAGKTAVA 387
            FQKEAIYYLEKG+SVFVAAHTSAGKT VA
Sbjct: 145 TFQKEAIYYLEKGDSVFVAAHTSAGKTVVA 174


>ref|XP_004163748.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 684

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/90 (66%), Positives = 69/90 (76%)
 Frame = +1

Query: 118 LDEILLVESGNSTSGLIEGSGTSEQQQKEAWAVSGGSESIAARFHDLIPDKALDFPFELD 297
           LDEIL +ESG  +    + +    Q+ KEAW V GG E I+ RFHDL+PD ALDFPFELD
Sbjct: 305 LDEILSLESGGFSLSSDQATEVGAQK-KEAWVVVGGREDISLRFHDLVPDMALDFPFELD 363

Query: 298 AFQKEAIYYLEKGNSVFVAAHTSAGKTAVA 387
            FQKEAIY+LEKG+SVFVAAHTSAGKT VA
Sbjct: 364 TFQKEAIYHLEKGDSVFVAAHTSAGKTVVA 393


>ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/90 (66%), Positives = 69/90 (76%)
 Frame = +1

Query: 118 LDEILLVESGNSTSGLIEGSGTSEQQQKEAWAVSGGSESIAARFHDLIPDKALDFPFELD 297
           LDEIL +ESG  +    + +    Q+ KEAW V GG E I+ RFHDL+PD ALDFPFELD
Sbjct: 305 LDEILSLESGGFSLSSDQATEVGAQK-KEAWVVVGGREDISLRFHDLVPDMALDFPFELD 363

Query: 298 AFQKEAIYYLEKGNSVFVAAHTSAGKTAVA 387
            FQKEAIY+LEKG+SVFVAAHTSAGKT VA
Sbjct: 364 TFQKEAIYHLEKGDSVFVAAHTSAGKTVVA 393


>ref|XP_002520439.1| helicase, putative [Ricinus communis] gi|223540281|gb|EEF41852.1|
           helicase, putative [Ricinus communis]
          Length = 1335

 Score =  117 bits (292), Expect = 1e-24
 Identities = 72/133 (54%), Positives = 83/133 (62%), Gaps = 6/133 (4%)
 Frame = +1

Query: 7   ESNVDVED---LNKPESYLPETERXXXXXXXXXXXXXXXXLDEILLVESGNSTS---GLI 168
           +S+VDV     L K ES   ++E                 LDEIL V+SG  TS   G  
Sbjct: 251 KSDVDVVPEVHLLKDESRKSDSEESKIDIQGSVFETEVSVLDEILSVDSGGLTSRSDGTG 310

Query: 169 EGSGTSEQQQKEAWAVSGGSESIAARFHDLIPDKALDFPFELDAFQKEAIYYLEKGNSVF 348
           +G G  E   K+ WA+SG SE IA  F+ L+PD ALDFPFELD FQKEAIYYLEKG+SVF
Sbjct: 311 DGGGHKE---KKGWALSGNSEWIAEHFYQLLPDTALDFPFELDTFQKEAIYYLEKGDSVF 367

Query: 349 VAAHTSAGKTAVA 387
           VAAHTSAGKT VA
Sbjct: 368 VAAHTSAGKTVVA 380


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